TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 122 |
| AclWI | GGATC | 2 cut(s) | 263, 276 |
| AcoI | YGGCCR | 1 cut(s) | 134 |
| AcsI | RAATTY | 1 cut(s) | 210 |
| AcuI | CTGAAG | 1 cut(s) | 327 |
| AdeI | CACNNNGTG | 1 cut(s) | 189 |
| AfaI | GTAC | 1 cut(s) | 282 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 282 |
| AgsI | TTSAA | 1 cut(s) | 408 |
| AjnI | CCWGG | 1 cut(s) | 185 |
| AluBI | AGCT | 3 cut(s) | 54, 107, 300 |
| AluI | AGCT | 3 cut(s) | 54, 107, 300 |
| Alw26I | GTCTC | 3 cut(s) | 54, 70, 358 |
| AlwI | GGATC | 2 cut(s) | 263, 276 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 63 |
| AoxI | GGCC | 1 cut(s) | 134 |
| ApeKI | GCWGC | 1 cut(s) | 51 |
| ApoI | RAATTY | 1 cut(s) | 210 |
| AsuHPI | GGTGA | 2 cut(s) | 22, 156 |
| BalI | TGGCCA | 1 cut(s) | 136 |
| BamHI | GGATCC | 1 cut(s) | 268 |
| BbvI | GCAGC | 1 cut(s) | 63 |
| BccI | CCATC | 5 cut(s) | 31, 41, 54, 158, 393 |
| BciT130I | CCWGG | 1 cut(s) | 187 |
| BcoDI | GTCTC | 3 cut(s) | 54, 70, 358 |
| BfmI | CTRYAG | 1 cut(s) | 55 |
| BisI | GCNGC | 1 cut(s) | 52 |
| BlpI | GCTNAGC | 1 cut(s) | 318 |
| BlsI | GCNGC | 1 cut(s) | 53 |
| Bme1390I | CCNGG | 1 cut(s) | 187 |
| BmiI | GGNNCC | 1 cut(s) | 270 |
| BmrFI | CCNGG | 1 cut(s) | 187 |
| BmrI | ACTGGG | 1 cut(s) | 73 |
| BmuI | ACTGGG | 1 cut(s) | 73 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 318 |
| BpuEI | CTTGAG | 1 cut(s) | 394 |
| BsaBI | GATNNNNATC | 1 cut(s) | 267 |
| BsaI | GGTCTC | 1 cut(s) | 358 |
| BsaJI | CCNNGG | 2 cut(s) | 84, 222 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 282 |
| Bse118I | RCCGGY | 1 cut(s) | 250 |
| Bse1I | ACTGG | 1 cut(s) | 68 |
| Bse8I | GATNNNNATC | 1 cut(s) | 267 |
| BseBI | CCWGG | 1 cut(s) | 187 |
| BseDI | CCNNGG | 2 cut(s) | 84, 222 |
| BseGI | GGATG | 3 cut(s) | 33, 202, 404 |
| BseJI | GATNNNNATC | 1 cut(s) | 267 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 282 |
| BseNI | ACTGG | 1 cut(s) | 68 |
| BseRI | GAGGAG | 1 cut(s) | 310 |
| BseXI | GCAGC | 1 cut(s) | 63 |
| BshFI | GGCC | 1 cut(s) | 136 |
| BsiSI | CCGG | 1 cut(s) | 251 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 282 |
| BsmAI | GTCTC | 3 cut(s) | 54, 70, 358 |
| BsnI | GGCC | 1 cut(s) | 136 |
| Bso31I | GGTCTC | 1 cut(s) | 358 |
| Bsp143I | GATC | 1 cut(s) | 268 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 318 |
| Bsp19I | CCATGG | 1 cut(s) | 222 |
| BspACI | CCGC | 1 cut(s) | 122 |
| BspANI | GGCC | 1 cut(s) | 136 |
| BspLI | GGNNCC | 1 cut(s) | 270 |
| BspPI | GGATC | 2 cut(s) | 263, 276 |
| BspTNI | GGTCTC | 1 cut(s) | 358 |
| BsrFI | RCCGGY | 1 cut(s) | 250 |
| BsrI | ACTGG | 1 cut(s) | 68 |
| BssAI | RCCGGY | 1 cut(s) | 250 |
| BssECI | CCNNGG | 2 cut(s) | 84, 222 |
| BssMI | GATC | 1 cut(s) | 268 |
| BssT1I | CCWWGG | 2 cut(s) | 84, 222 |
| Bst2UI | CCWGG | 1 cut(s) | 187 |
| Bst4CI | ACNGT | 1 cut(s) | 244 |
| BstDEI | CTNAG | 1 cut(s) | 318 |
| BstDSI | CCRYGG | 1 cut(s) | 222 |
| BstF5I | GGATG | 3 cut(s) | 33, 202, 404 |
| BstKTI | GATC | 1 cut(s) | 271 |
| BstMAI | GTCTC | 3 cut(s) | 54, 70, 358 |
| BstMBI | GATC | 1 cut(s) | 268 |
| BstNI | CCWGG | 1 cut(s) | 187 |
| BstSCI | CCNGG | 1 cut(s) | 185 |
| BstSFI | CTRYAG | 1 cut(s) | 55 |
| BstV1I | GCAGC | 1 cut(s) | 63 |
| BstX2I | RGATCY | 1 cut(s) | 268 |
| BstYI | RGATCY | 1 cut(s) | 268 |
| BsuRI | GGCC | 1 cut(s) | 136 |
| BtgI | CCRYGG | 1 cut(s) | 222 |
| BtgZI | GCGATG | 1 cut(s) | 32 |
| BtsCI | GGATG | 3 cut(s) | 33, 202, 404 |
| BtsIMutI | CAGTG | 1 cut(s) | 343 |
| CaiI | CAGNNNCTG | 1 cut(s) | 63 |
| Cfr10I | RCCGGY | 1 cut(s) | 250 |
| CsiI | ACCWGGT | 1 cut(s) | 185 |
| Csp6I | GTAC | 1 cut(s) | 281 |
| CviAII | CATG | 1 cut(s) | 223 |
| CviJI | RGCY | 7 cut(s) | 54, 92, 107, 136, 300, 311, 371 |
| CviKI_1 | RGCY | 7 cut(s) | 54, 92, 107, 136, 300, 311, 371 |
| CviQI | GTAC | 1 cut(s) | 281 |
| DdeI | CTNAG | 1 cut(s) | 318 |
| DpnI | GATC | 1 cut(s) | 270 |
| DpnII | GATC | 1 cut(s) | 268 |
| DraIII | CACNNNGTG | 1 cut(s) | 189 |
| EaeI | YGGCCR | 1 cut(s) | 134 |
| Eco130I | CCWWGG | 2 cut(s) | 84, 222 |
| Eco31I | GGTCTC | 1 cut(s) | 358 |
| Eco57I | CTGAAG | 1 cut(s) | 327 |
| EcoRII | CCWGG | 1 cut(s) | 185 |
| EcoT14I | CCWWGG | 2 cut(s) | 84, 222 |
| EcoT22I | ATGCAT | 1 cut(s) | 144 |
| ErhI | CCWWGG | 2 cut(s) | 84, 222 |
| FaeI | CATG | 1 cut(s) | 226 |
| FaiI | YATR | 6 cut(s) | 95, 144, 174, 224, 347, 417 |
| FatI | CATG | 1 cut(s) | 222 |
| FauI | CCCGC | 1 cut(s) | 129 |
| Fnu4HI | GCNGC | 1 cut(s) | 52 |
| FokI | GGATG | 3 cut(s) | 20, 209, 411 |
| Fsp4HI | GCNGC | 1 cut(s) | 52 |
| GluI | GCNGC | 1 cut(s) | 52 |
| HaeIII | GGCC | 1 cut(s) | 136 |
| HapII | CCGG | 1 cut(s) | 251 |
| Hin1II | CATG | 1 cut(s) | 226 |
| HinfI | GANTC | 3 cut(s) | 218, 286, 404 |
| HpaII | CCGG | 1 cut(s) | 251 |
| HphI | GGTGA | 2 cut(s) | 22, 156 |
| Hpy188I | TCNGA | 1 cut(s) | 277 |
| Hpy188III | TCNNGA | 1 cut(s) | 396 |
| HpyCH4III | ACNGT | 1 cut(s) | 244 |
| HpyCH4V | TGCA | 2 cut(s) | 142, 206 |
| HpyF3I | CTNAG | 1 cut(s) | 318 |
| Hsp92II | CATG | 1 cut(s) | 226 |
| Kzo9I | GATC | 1 cut(s) | 268 |
| LmnI | GCTCC | 1 cut(s) | 297 |
| LpnPI | CCDG | 7 cut(s) | 49, 117, 172, 199, 264, 381, 381 |
| Lsp1109I | GCAGC | 1 cut(s) | 63 |
| MabI | ACCWGGT | 1 cut(s) | 185 |
| MaeIII | GTNAC | 1 cut(s) | 236 |
| MalI | GATC | 1 cut(s) | 270 |
| MboI | GATC | 1 cut(s) | 268 |
| MboII | GAAGA | 1 cut(s) | 338 |
| MflI | RGATCY | 1 cut(s) | 268 |
| MlsI | TGGCCA | 1 cut(s) | 136 |
| MluCI | AATT | 2 cut(s) | 210, 388 |
| MluNI | TGGCCA | 1 cut(s) | 136 |
| MnlI | CCTC | 5 cut(s) | 64, 82, 138, 288, 351 |
| Mox20I | TGGCCA | 1 cut(s) | 136 |
| Mph1103I | ATGCAT | 1 cut(s) | 144 |
| MscI | TGGCCA | 1 cut(s) | 136 |
| MseI | TTAA | 1 cut(s) | 387 |
| Msp20I | TGGCCA | 1 cut(s) | 136 |
| MspI | CCGG | 1 cut(s) | 251 |
| MspR9I | CCNGG | 1 cut(s) | 187 |
| MvaI | CCWGG | 1 cut(s) | 187 |
| NcoI | CCATGG | 1 cut(s) | 222 |
| NdeII | GATC | 1 cut(s) | 268 |
| NlaIII | CATG | 1 cut(s) | 226 |
| NlaIV | GGNNCC | 1 cut(s) | 270 |
| NsiI | ATGCAT | 1 cut(s) | 144 |
| PfeI | GAWTC | 3 cut(s) | 218, 286, 404 |
| PkrI | GCNGC | 1 cut(s) | 53 |
| Psp6I | CCWGG | 1 cut(s) | 185 |
| PspGI | CCWGG | 1 cut(s) | 185 |
| PspN4I | GGNNCC | 1 cut(s) | 270 |
| PstNI | CAGNNNCTG | 1 cut(s) | 63 |
| PsuI | RGATCY | 1 cut(s) | 268 |
| RsaI | GTAC | 1 cut(s) | 282 |
| RsaNI | GTAC | 1 cut(s) | 281 |
| SaqAI | TTAA | 1 cut(s) | 387 |
| SatI | GCNGC | 1 cut(s) | 52 |
| Sau3AI | GATC | 1 cut(s) | 268 |
| ScrFI | CCNGG | 1 cut(s) | 187 |
| SetI | ASST | 8 cut(s) | 56, 86, 109, 130, 188, 302, 354, 362 |
| SexAI | ACCWGGT | 1 cut(s) | 185 |
| SfcI | CTRYAG | 1 cut(s) | 55 |
| SmlI | CTYRAG | 1 cut(s) | 373 |
| SmoI | CTYRAG | 1 cut(s) | 373 |
| Sse9I | AATT | 2 cut(s) | 210, 388 |
| SsiI | CCGC | 1 cut(s) | 122 |
| StyD4I | CCNGG | 1 cut(s) | 185 |
| StyI | CCWWGG | 2 cut(s) | 84, 222 |
| TaaI | ACNGT | 1 cut(s) | 244 |
| TasI | AATT | 2 cut(s) | 210, 388 |
| TfiI | GAWTC | 3 cut(s) | 218, 286, 404 |
| Tru1I | TTAA | 1 cut(s) | 387 |
| Tru9I | TTAA | 1 cut(s) | 387 |
| TscAI | CASTG | 1 cut(s) | 343 |
| TseI | GCWGC | 1 cut(s) | 51 |
| TspDTI | ATGAA | 1 cut(s) | 213 |
| TspGWI | ACGGA | 2 cut(s) | 261, 298 |
| TspRI | CASTG | 1 cut(s) | 343 |
| XapI | RAATTY | 1 cut(s) | 210 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 190 |
| Zsp2I | ATGCAT | 1 cut(s) | 144 |