R3H domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G40960 AT2G40960 AT3G56680 |
| malus_domestica | MD12G1092100.v1.1 MD12G1092300.v1.1 |
| prunus_persica | Prupe.7G027300_v2.0.a1 Prupe.7G027300_v2.0.a1 |
| pyrus_communis | pycom12g07990 |
| rosa_rugosa | Rorug02G0260200 Rorug02G0260300 Rorug02G0260400 Rorug02G0260500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 781 |
| AciI | CCGC | 1 cut(s) | 29 |
| AclWI | GGATC | 4 cut(s) | 452, 623, 663, 707 |
| AcoI | YGGCCR | 1 cut(s) | 956 |
| AcsI | RAATTY | 1 cut(s) | 607 |
| AdeI | CACNNNGTG | 1 cut(s) | 221 |
| AfaI | GTAC | 3 cut(s) | 491, 664, 709 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 76 |
| AgsI | TTSAA | 5 cut(s) | 332, 806, 864, 885, 922 |
| AjnI | CCWGG | 2 cut(s) | 611, 1014 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 120, 152 |
| AluBI | AGCT | 7 cut(s) | 17, 169, 440, 802, 860, 893, 1007 |
| AluI | AGCT | 7 cut(s) | 17, 169, 440, 802, 860, 893, 1007 |
| Alw26I | GTCTC | 1 cut(s) | 113 |
| AlwI | GGATC | 4 cut(s) | 452, 623, 663, 707 |
| Ama87I | CYCGRG | 1 cut(s) | 672 |
| AoxI | GGCC | 2 cut(s) | 875, 956 |
| ApeKI | GCWGC | 3 cut(s) | 166, 212, 965 |
| ApoI | RAATTY | 1 cut(s) | 607 |
| AspA2I | CCTAGG | 1 cut(s) | 401 |
| AspS9I | GGNCC | 3 cut(s) | 67, 559, 875 |
| AsuHPI | GGTGA | 3 cut(s) | 103, 307, 554 |
| AsuII | TTCGAA | 1 cut(s) | 20 |
| AvaI | CYCGRG | 1 cut(s) | 672 |
| AvaII | GGWCC | 2 cut(s) | 67, 559 |
| AvrII | CCTAGG | 1 cut(s) | 401 |
| BalI | TGGCCA | 1 cut(s) | 958 |
| BanI | GGYRCC | 1 cut(s) | 781 |
| BanII | GRGCYC | 3 cut(s) | 508, 856, 902 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 473, 505 |
| BbsI | GAAGAC | 1 cut(s) | 746 |
| BbvI | GCAGC | 3 cut(s) | 178, 199, 952 |
| BccI | CCATC | 1 cut(s) | 266 |
| BciT130I | CCWGG | 2 cut(s) | 613, 1016 |
| BclI | TGATCA | 1 cut(s) | 991 |
| BcoDI | GTCTC | 1 cut(s) | 113 |
| BfaI | CTAG | 2 cut(s) | 402, 525 |
| BisI | GCNGC | 3 cut(s) | 167, 213, 966 |
| BlnI | CCTAGG | 1 cut(s) | 401 |
| BlsI | GCNGC | 3 cut(s) | 168, 214, 967 |
| Bme1390I | CCNGG | 2 cut(s) | 613, 1016 |
| Bme18I | GGWCC | 2 cut(s) | 67, 559 |
| BmeT110I | CYCGRG | 1 cut(s) | 672 |
| BmgT120I | GGNCC | 3 cut(s) | 67, 559, 875 |
| BmiI | GGNNCC | 4 cut(s) | 69, 561, 783, 1020 |
| BmrFI | CCNGG | 2 cut(s) | 613, 1016 |
| BmrI | ACTGGG | 1 cut(s) | 805 |
| BmsI | GCATC | 5 cut(s) | 16, 590, 834, 928, 1042 |
| BmuI | ACTGGG | 1 cut(s) | 805 |
| BpiI | GAAGAC | 1 cut(s) | 746 |
| BpmI | CTGGAG | 1 cut(s) | 74 |
| Bpu10I | CCTNAGC | 1 cut(s) | 375 |
| Bpu14I | TTCGAA | 1 cut(s) | 20 |
| BpuEI | CTTGAG | 1 cut(s) | 840 |
| BsaBI | GATNNNNATC | 1 cut(s) | 723 |
| BsaJI | CCNNGG | 3 cut(s) | 401, 848, 912 |
| BsaWI | WCCGGW | 1 cut(s) | 565 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 76 |
| Bse1I | ACTGG | 1 cut(s) | 811 |
| Bse3DI | GCAATG | 1 cut(s) | 975 |
| Bse8I | GATNNNNATC | 1 cut(s) | 723 |
| BseBI | CCWGG | 2 cut(s) | 613, 1016 |
| BseDI | CCNNGG | 3 cut(s) | 401, 848, 912 |
| BseGI | GGATG | 4 cut(s) | 574, 601, 943, 1033 |
| BseJI | GATNNNNATC | 1 cut(s) | 723 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 76 |
| BseMI | GCAATG | 1 cut(s) | 975 |
| BseMII | CTCAG | 4 cut(s) | 282, 366, 854, 1031 |
| BseNI | ACTGG | 1 cut(s) | 811 |
| BseRI | GAGGAG | 2 cut(s) | 68, 500 |
| BseXI | GCAGC | 3 cut(s) | 178, 199, 952 |
| BseYI | CCCAGC | 3 cut(s) | 322, 440, 889 |
| BsgI | GTGCAG | 2 cut(s) | 198, 839 |
| BshFI | GGCC | 2 cut(s) | 877, 958 |
| BshNI | GGYRCC | 1 cut(s) | 781 |
| BsiHKCI | CYCGRG | 1 cut(s) | 672 |
| BsiSI | CCGG | 1 cut(s) | 566 |
| BslFI | GGGAC | 1 cut(s) | 545 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 76 |
| BsmAI | GTCTC | 1 cut(s) | 113 |
| BsmBI | CGTCTC | 1 cut(s) | 113 |
| BsmFI | GGGAC | 1 cut(s) | 545 |
| BsnI | GGCC | 2 cut(s) | 877, 958 |
| BsoBI | CYCGRG | 1 cut(s) | 672 |
| Bsp119I | TTCGAA | 1 cut(s) | 20 |
| Bsp1286I | GDGCHC | 3 cut(s) | 508, 856, 902 |
| Bsp143I | GATC | 6 cut(s) | 444, 628, 655, 712, 724, 991 |
| Bsp19I | CCATGG | 1 cut(s) | 912 |
| BspACI | CCGC | 1 cut(s) | 29 |
| BspANI | GGCC | 2 cut(s) | 877, 958 |
| BspCNI | CTCAG | 4 cut(s) | 281, 367, 853, 1032 |
| BspLI | GGNNCC | 4 cut(s) | 69, 561, 783, 1020 |
| BspPI | GGATC | 4 cut(s) | 452, 623, 663, 707 |
| BspT104I | TTCGAA | 1 cut(s) | 20 |
| BspT107I | GGYRCC | 1 cut(s) | 781 |
| BsrDI | GCAATG | 1 cut(s) | 975 |
| BsrI | ACTGG | 1 cut(s) | 811 |
| BssECI | CCNNGG | 3 cut(s) | 401, 848, 912 |
| BssMI | GATC | 6 cut(s) | 444, 628, 655, 712, 724, 991 |
| BssT1I | CCWWGG | 3 cut(s) | 401, 848, 912 |
| Bst2UI | CCWGG | 2 cut(s) | 613, 1016 |
| Bst4CI | ACNGT | 5 cut(s) | 107, 221, 391, 707, 832 |
| Bst6I | CTCTTC | 1 cut(s) | 468 |
| BstBI | TTCGAA | 1 cut(s) | 20 |
| BstC8I | GCNNGC | 1 cut(s) | 508 |
| BstDEI | CTNAG | 4 cut(s) | 268, 375, 840, 1040 |
| BstDSI | CCRYGG | 1 cut(s) | 912 |
| BstF5I | GGATG | 4 cut(s) | 574, 601, 943, 1033 |
| BstKTI | GATC | 6 cut(s) | 447, 631, 658, 715, 727, 994 |
| BstMAI | GTCTC | 1 cut(s) | 113 |
| BstMBI | GATC | 6 cut(s) | 444, 628, 655, 712, 724, 991 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 516, 525 |
| BstNI | CCWGG | 2 cut(s) | 613, 1016 |
| BstNSI | RCATGY | 1 cut(s) | 952 |
| BstSCI | CCNGG | 2 cut(s) | 611, 1014 |
| BstV1I | GCAGC | 3 cut(s) | 178, 199, 952 |
| BstV2I | GAAGAC | 1 cut(s) | 746 |
| BstX2I | RGATCY | 1 cut(s) | 655 |
| BstYI | RGATCY | 1 cut(s) | 655 |
| BsuRI | GGCC | 2 cut(s) | 877, 958 |
| BtgI | CCRYGG | 1 cut(s) | 912 |
| BtsCI | GGATG | 4 cut(s) | 574, 601, 943, 1033 |
| BtsI | GCAGTG | 1 cut(s) | 959 |
| BtsIMutI | CAGTG | 1 cut(s) | 959 |
| Cac8I | GCNNGC | 1 cut(s) | 508 |
| Cfr13I | GGNCC | 3 cut(s) | 67, 559, 875 |
| Csp6I | GTAC | 3 cut(s) | 490, 663, 708 |
| CviAII | CATG | 3 cut(s) | 434, 913, 949 |
| CviQI | GTAC | 3 cut(s) | 490, 663, 708 |
| DdeI | CTNAG | 4 cut(s) | 268, 375, 840, 1040 |
| DpnI | GATC | 6 cut(s) | 446, 630, 657, 714, 726, 993 |
| DpnII | GATC | 6 cut(s) | 444, 628, 655, 712, 724, 991 |
| DraIII | CACNNNGTG | 1 cut(s) | 221 |
| EaeI | YGGCCR | 1 cut(s) | 956 |
| Eam1104I | CTCTTC | 1 cut(s) | 468 |
| EarI | CTCTTC | 1 cut(s) | 468 |
| Eco130I | CCWWGG | 3 cut(s) | 401, 848, 912 |
| Eco24I | GRGCYC | 3 cut(s) | 508, 856, 902 |
| Eco32I | GATATC | 1 cut(s) | 136 |
| Eco47I | GGWCC | 2 cut(s) | 67, 559 |
| Eco88I | CYCGRG | 1 cut(s) | 672 |
| EcoO109I | RGGNCCY | 1 cut(s) | 559 |
| EcoRII | CCWGG | 2 cut(s) | 611, 1014 |
| EcoRV | GATATC | 1 cut(s) | 136 |
| EcoT14I | CCWWGG | 3 cut(s) | 401, 848, 912 |
| EcoT38I | GRGCYC | 3 cut(s) | 508, 856, 902 |
| ErhI | CCWWGG | 3 cut(s) | 401, 848, 912 |
| Esp3I | CGTCTC | 1 cut(s) | 113 |
| FaeI | CATG | 3 cut(s) | 437, 916, 952 |
| FaqI | GGGAC | 1 cut(s) | 545 |
| FatI | CATG | 3 cut(s) | 433, 912, 948 |
| FauNDI | CATATG | 1 cut(s) | 988 |
| FbaI | TGATCA | 1 cut(s) | 991 |
| Fnu4HI | GCNGC | 3 cut(s) | 167, 213, 966 |
| FokI | GGATG | 4 cut(s) | 581, 608, 950, 1020 |
| FriOI | GRGCYC | 3 cut(s) | 508, 856, 902 |
| Fsp4HI | GCNGC | 3 cut(s) | 167, 213, 966 |
| FspBI | CTAG | 2 cut(s) | 402, 525 |
| GluI | GCNGC | 3 cut(s) | 167, 213, 966 |
| GsaI | CCCAGC | 3 cut(s) | 326, 444, 893 |
| GsuI | CTGGAG | 1 cut(s) | 74 |
| HaeIII | GGCC | 2 cut(s) | 877, 958 |
| HapII | CCGG | 1 cut(s) | 566 |
| Hin1II | CATG | 3 cut(s) | 437, 916, 952 |
| HincII | GTYRAC | 1 cut(s) | 34 |
| HindII | GTYRAC | 1 cut(s) | 34 |
| HindIII | AAGCTT | 2 cut(s) | 800, 858 |
| HinfI | GANTC | 7 cut(s) | 5, 56, 94, 328, 536, 751, 918 |
| HpaII | CCGG | 1 cut(s) | 566 |
| HphI | GGTGA | 3 cut(s) | 103, 307, 554 |
| Hpy166II | GTNNAC | 3 cut(s) | 34, 67, 646 |
| Hpy188I | TCNGA | 8 cut(s) | 271, 340, 361, 535, 689, 843, 927, 1001 |
| Hpy188III | TCNNGA | 7 cut(s) | 91, 139, 158, 257, 632, 672, 716 |
| Hpy8I | GTNNAC | 3 cut(s) | 34, 67, 646 |
| HpyAV | CCTTC | 3 cut(s) | 212, 475, 891 |
| HpyCH4III | ACNGT | 5 cut(s) | 107, 221, 391, 707, 832 |
| HpyCH4V | TGCA | 7 cut(s) | 151, 215, 244, 796, 820, 952, 968 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 516, 525 |
| HpyF3I | CTNAG | 4 cut(s) | 268, 375, 840, 1040 |
| Hsp92II | CATG | 3 cut(s) | 437, 916, 952 |
| Ksp22I | TGATCA | 1 cut(s) | 991 |
| Kzo9I | GATC | 6 cut(s) | 444, 628, 655, 712, 724, 991 |
| LmnI | GCTCC | 2 cut(s) | 437, 1024 |
| Lsp1109I | GCAGC | 3 cut(s) | 178, 199, 952 |
| LweI | GCATC | 5 cut(s) | 16, 590, 834, 928, 1042 |
| MaeI | CTAG | 2 cut(s) | 402, 525 |
| MalI | GATC | 6 cut(s) | 446, 630, 657, 714, 726, 993 |
| MboI | GATC | 6 cut(s) | 444, 628, 655, 712, 724, 991 |
| MboII | GAAGA | 3 cut(s) | 3, 485, 746 |
| MflI | RGATCY | 1 cut(s) | 655 |
| MhlI | GDGCHC | 3 cut(s) | 508, 856, 902 |
| MlsI | TGGCCA | 1 cut(s) | 958 |
| MluCI | AATT | 3 cut(s) | 332, 607, 864 |
| MluNI | TGGCCA | 1 cut(s) | 958 |
| MlyI | GAGTC | 3 cut(s) | 65, 530, 760 |
| MmeI | TCCRAC | 1 cut(s) | 205 |
| Mox20I | TGGCCA | 1 cut(s) | 958 |
| MscI | TGGCCA | 1 cut(s) | 958 |
| MseI | TTAA | 3 cut(s) | 351, 384, 774 |
| MslI | CAYNNNNRTG | 1 cut(s) | 987 |
| Msp20I | TGGCCA | 1 cut(s) | 958 |
| MspI | CCGG | 1 cut(s) | 566 |
| MspR9I | CCNGG | 2 cut(s) | 613, 1016 |
| MvaI | CCWGG | 2 cut(s) | 613, 1016 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 516, 525 |
| NcoI | CCATGG | 1 cut(s) | 912 |
| NdeI | CATATG | 1 cut(s) | 988 |
| NdeII | GATC | 6 cut(s) | 444, 628, 655, 712, 724, 991 |
| NlaIII | CATG | 3 cut(s) | 437, 916, 952 |
| NlaIV | GGNNCC | 4 cut(s) | 69, 561, 783, 1020 |
| NspI | RCATGY | 1 cut(s) | 952 |
| NspV | TTCGAA | 1 cut(s) | 20 |
| PaeR7I | CTCGAG | 1 cut(s) | 672 |
| PfeI | GAWTC | 4 cut(s) | 5, 94, 328, 918 |
| PfoI | TCCNGGA | 1 cut(s) | 611 |
| PkrI | GCNGC | 3 cut(s) | 168, 214, 967 |
| PleI | GAGTC | 3 cut(s) | 64, 530, 759 |
| PpsI | GAGTC | 3 cut(s) | 64, 530, 759 |
| PpuMI | RGGWCCY | 1 cut(s) | 559 |
| Psp5II | RGGWCCY | 1 cut(s) | 559 |
| Psp6I | CCWGG | 2 cut(s) | 611, 1014 |
| PspFI | CCCAGC | 3 cut(s) | 322, 440, 889 |
| PspGI | CCWGG | 2 cut(s) | 611, 1014 |
| PspN4I | GGNNCC | 4 cut(s) | 69, 561, 783, 1020 |
| PspPI | GGNCC | 3 cut(s) | 67, 559, 875 |
| PspPPI | RGGWCCY | 1 cut(s) | 559 |
| PsuI | RGATCY | 1 cut(s) | 655 |
| RsaI | GTAC | 3 cut(s) | 491, 664, 709 |
| RsaNI | GTAC | 3 cut(s) | 490, 663, 708 |
| RseI | CAYNNNNRTG | 1 cut(s) | 987 |
| SaqAI | TTAA | 3 cut(s) | 351, 384, 774 |
| SatI | GCNGC | 3 cut(s) | 167, 213, 966 |
| Sau3AI | GATC | 6 cut(s) | 444, 628, 655, 712, 724, 991 |
| Sau96I | GGNCC | 3 cut(s) | 67, 559, 875 |
| SchI | GAGTC | 3 cut(s) | 65, 530, 760 |
| ScrFI | CCNGG | 2 cut(s) | 613, 1016 |
| SduI | GDGCHC | 3 cut(s) | 508, 856, 902 |
| SfaNI | GCATC | 5 cut(s) | 16, 590, 834, 928, 1042 |
| Sfr274I | CTCGAG | 1 cut(s) | 672 |
| SfuI | TTCGAA | 1 cut(s) | 20 |
| SinI | GGWCC | 2 cut(s) | 67, 559 |
| SlaI | CTCGAG | 1 cut(s) | 672 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 987 |
| SmlI | CTYRAG | 2 cut(s) | 672, 855 |
| SmoI | CTYRAG | 2 cut(s) | 672, 855 |
| Sse9I | AATT | 3 cut(s) | 332, 607, 864 |
| SsiI | CCGC | 1 cut(s) | 29 |
| SspMI | CTAG | 2 cut(s) | 402, 525 |
| StyD4I | CCNGG | 2 cut(s) | 611, 1014 |
| StyI | CCWWGG | 3 cut(s) | 401, 848, 912 |
| TaaI | ACNGT | 5 cut(s) | 107, 221, 391, 707, 832 |
| TaqI | TCGA | 5 cut(s) | 20, 81, 205, 673, 727 |
| TasI | AATT | 3 cut(s) | 332, 607, 864 |
| TatI | WGTACW | 1 cut(s) | 489 |
| TfiI | GAWTC | 4 cut(s) | 5, 94, 328, 918 |
| Tru1I | TTAA | 3 cut(s) | 351, 384, 774 |
| Tru9I | TTAA | 3 cut(s) | 351, 384, 774 |
| TscAI | CASTG | 1 cut(s) | 959 |
| TseI | GCWGC | 3 cut(s) | 166, 212, 965 |
| TspDTI | ATGAA | 5 cut(s) | 437, 441, 618, 657, 975 |
| TspRI | CASTG | 1 cut(s) | 959 |
| VpaK11BI | GGWCC | 2 cut(s) | 67, 559 |
| XapI | RAATTY | 1 cut(s) | 607 |
| XceI | RCATGY | 1 cut(s) | 952 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 121 |
| XhoI | CTCGAG | 1 cut(s) | 672 |
| XmaJI | CCTAGG | 1 cut(s) | 401 |
| XspI | CTAG | 2 cut(s) | 402, 525 |