Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G57060 AT3G57060 AT3G57060 |
| fragaria_vesca | FvH4_6g25220 FvH4_6g25220 FvH4_6g25220 |
| malus_domestica | MD14G1099800.v1.1 |
| prunus_persica | Prupe.7G042500_v2.0.a1 Prupe.7G042500_v2.0.a1 Prupe.7G042500_v2.0.a1 |
| pyrus_communis | pycom14g07630 |
| rosa_chinensis | RchiOBHm_Chr2g0125151 |
| rosa_laevigata | RLG00000018850 |
| rosa_multiflora | Rmu_sc0003505.1_g000031 |
| rosa_roxburghii | Rroxscaffold_2G00118240 Rroxscaffold_2G00118700 |
| rosa_rugosa | Rorug02G0255700 Rorug02G0255800 Rorug02G0255900 |
| rosa_samantha | Rh2AG314200 Rh2BG322400 Rh2CG304600 Rh2DG340800 |
| rosa_wichuraiana | Rw2G025420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1005 |
| Acc65I | GGTACC | 1 cut(s) | 2621 |
| AccB1I | GGYRCC | 1 cut(s) | 2621 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 721, 989 |
| AccBSI | CCGCTC | 2 cut(s) | 85, 1138 |
| AccI | GTMKAC | 2 cut(s) | 959, 2541 |
| AccII | CGCG | 2 cut(s) | 794, 3941 |
| AccIII | TCCGGA | 1 cut(s) | 2359 |
| AciI | CCGC | 4 cut(s) | 83, 520, 794, 1138 |
| AclWI | GGATC | 2 cut(s) | 360, 3743 |
| AcsI | RAATTY | 9 cut(s) | 595, 1125, 1300, 2364, 2580, 2743, 2788, 2869, 3639 |
| AcuI | CTGAAG | 8 cut(s) | 1163, 1404, 2229, 2691, 2873, 3018, 3281, 3744 |
| AfaI | GTAC | 9 cut(s) | 203, 469, 719, 1382, 1459, 2623, 2810, 3129, 3829 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 515, 721, 989, 1589, 2077, 3484 |
| AflIII | ACRYGT | 1 cut(s) | 3472 |
| AjiI | CACGTC | 1 cut(s) | 3475 |
| AjnI | CCWGG | 3 cut(s) | 470, 3017, 3856 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 286, 318, 1905, 1937, 3044, 3076 |
| AleI | CACNNNNGTG | 2 cut(s) | 344, 2906 |
| Alw26I | GTCTC | 3 cut(s) | 1784, 1920, 2955 |
| AlwI | GGATC | 2 cut(s) | 360, 3743 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 2603, 3041, 3259 |
| Aor13HI | TCCGGA | 1 cut(s) | 2359 |
| AoxI | GGCC | 4 cut(s) | 517, 970, 1611, 3909 |
| ApoI | RAATTY | 9 cut(s) | 595, 1125, 1300, 2364, 2580, 2743, 2788, 2869, 3639 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 111, 143 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1354, 2931 |
| Asp718I | GGTACC | 1 cut(s) | 2621 |
| AspLEI | GCGC | 2 cut(s) | 649, 2920 |
| AspS9I | GGNCC | 5 cut(s) | 270, 1337, 1611, 3499, 3909 |
| AsuC2I | CCSGG | 1 cut(s) | 2249 |
| AsuHPI | GGTGA | 6 cut(s) | 1085, 1434, 1985, 2435, 2437, 3707 |
| AsuII | TTCGAA | 2 cut(s) | 1102, 1348 |
| AvaII | GGWCC | 3 cut(s) | 270, 1337, 3499 |
| AxyI | CCTNAGG | 1 cut(s) | 2628 |
| BanI | GGYRCC | 1 cut(s) | 2621 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1356, 1388, 2664, 2696 |
| BbsI | GAAGAC | 5 cut(s) | 63, 257, 1091, 1692, 2600 |
| BciT130I | CCWGG | 3 cut(s) | 472, 3019, 3858 |
| BclI | TGATCA | 1 cut(s) | 2605 |
| BcnI | CCSGG | 1 cut(s) | 2249 |
| BcoDI | GTCTC | 3 cut(s) | 1784, 1920, 2955 |
| BlpI | GCTNAGC | 1 cut(s) | 2649 |
| Bme1390I | CCNGG | 4 cut(s) | 472, 2249, 3019, 3858 |
| Bme18I | GGWCC | 3 cut(s) | 270, 1337, 3499 |
| BmgBI | CACGTC | 1 cut(s) | 3475 |
| BmgT120I | GGNCC | 5 cut(s) | 270, 1337, 1611, 3499, 3909 |
| BmiI | GGNNCC | 8 cut(s) | 6, 80, 507, 2163, 2623, 2731, 2978, 3304 |
| BmrFI | CCNGG | 4 cut(s) | 472, 2249, 3019, 3858 |
| BmrI | ACTGGG | 1 cut(s) | 2289 |
| BmuI | ACTGGG | 1 cut(s) | 2289 |
| BpiI | GAAGAC | 5 cut(s) | 63, 257, 1091, 1692, 2600 |
| BpmI | CTGGAG | 3 cut(s) | 327, 1485, 2180 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2649 |
| Bpu14I | TTCGAA | 2 cut(s) | 1102, 1348 |
| BpuEI | CTTGAG | 5 cut(s) | 306, 1154, 1649, 1794, 1961 |
| BpuMI | CCSGG | 1 cut(s) | 2249 |
| Bsa29I | ATCGAT | 2 cut(s) | 740, 2862 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2604, 2883 |
| BsaI | GGTCTC | 1 cut(s) | 1920 |
| BsaJI | CCNNGG | 4 cut(s) | 1050, 1614, 2996, 3857 |
| BsaWI | WCCGGW | 2 cut(s) | 2359, 3824 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 853, 883 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 515, 721, 989, 1589, 2077, 3484 |
| Bse118I | RCCGGY | 1 cut(s) | 3692 |
| Bse21I | CCTNAGG | 1 cut(s) | 2628 |
| Bse3DI | GCAATG | 6 cut(s) | 609, 783, 1284, 2187, 2838, 3694 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2604, 2883 |
| BseAI | TCCGGA | 1 cut(s) | 2359 |
| BseBI | CCWGG | 3 cut(s) | 472, 3019, 3858 |
| BseCI | ATCGAT | 2 cut(s) | 740, 2862 |
| BseDI | CCNNGG | 4 cut(s) | 1050, 1614, 2996, 3857 |
| BseGI | GGATG | 8 cut(s) | 337, 481, 1069, 2090, 2350, 3771, 3787, 3968 |
| BseJI | GATNNNNATC | 2 cut(s) | 2604, 2883 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 515, 721, 989, 1589, 2077, 3484 |
| BseMI | GCAATG | 6 cut(s) | 609, 783, 1284, 2187, 2838, 3694 |
| BseMII | CTCAG | 6 cut(s) | 23, 292, 411, 1782, 2640, 3425 |
| BseRI | GAGGAG | 4 cut(s) | 278, 437, 2441, 3581 |
| BseYI | CCCAGC | 2 cut(s) | 800, 1873 |
| BsgI | GTGCAG | 2 cut(s) | 1278, 1583 |
| Bsh1236I | CGCG | 2 cut(s) | 794, 3941 |
| BshFI | GGCC | 4 cut(s) | 519, 972, 1613, 3911 |
| BshNI | GGYRCC | 1 cut(s) | 2621 |
| BshVI | ATCGAT | 2 cut(s) | 740, 2862 |
| BsiSI | CCGG | 4 cut(s) | 2248, 2360, 3693, 3825 |
| BslFI | GGGAC | 3 cut(s) | 90, 709, 965 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 515, 721, 989, 1589, 2077, 3484 |
| BsmAI | GTCTC | 3 cut(s) | 1784, 1920, 2955 |
| BsmFI | GGGAC | 3 cut(s) | 90, 709, 965 |
| BsmI | GAATGC | 5 cut(s) | 646, 1021, 1207, 3058, 3419 |
| BsnI | GGCC | 4 cut(s) | 519, 972, 1613, 3911 |
| Bso31I | GGTCTC | 1 cut(s) | 1920 |
| Bsp119I | TTCGAA | 2 cut(s) | 1102, 1348 |
| Bsp13I | TCCGGA | 1 cut(s) | 2359 |
| Bsp143I | GATC | 9 cut(s) | 145, 193, 352, 552, 741, 937, 2605, 3654, 3748 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2649 |
| Bsp19I | CCATGG | 1 cut(s) | 2996 |
| BspACI | CCGC | 4 cut(s) | 83, 520, 794, 1138 |
| BspANI | GGCC | 4 cut(s) | 519, 972, 1613, 3911 |
| BspCNI | CTCAG | 6 cut(s) | 24, 291, 412, 1781, 2641, 3424 |
| BspDI | ATCGAT | 2 cut(s) | 740, 2862 |
| BspEI | TCCGGA | 1 cut(s) | 2359 |
| BspFNI | CGCG | 2 cut(s) | 794, 3941 |
| BspLI | GGNNCC | 8 cut(s) | 6, 80, 507, 2163, 2623, 2731, 2978, 3304 |
| BspPI | GGATC | 2 cut(s) | 360, 3743 |
| BspQI | GCTCTTC | 2 cut(s) | 171, 1197 |
| BspT104I | TTCGAA | 2 cut(s) | 1102, 1348 |
| BspT107I | GGYRCC | 1 cut(s) | 2621 |
| BspTNI | GGTCTC | 1 cut(s) | 1920 |
| BsrBI | CCGCTC | 2 cut(s) | 85, 1138 |
| BsrDI | GCAATG | 6 cut(s) | 609, 783, 1284, 2187, 2838, 3694 |
| BsrFI | RCCGGY | 1 cut(s) | 3692 |
| BssAI | RCCGGY | 1 cut(s) | 3692 |
| BssECI | CCNNGG | 4 cut(s) | 1050, 1614, 2996, 3857 |
| BssMI | GATC | 9 cut(s) | 145, 193, 352, 552, 741, 937, 2605, 3654, 3748 |
| BssNAI | GTATAC | 1 cut(s) | 2542 |
| BssT1I | CCWWGG | 3 cut(s) | 1050, 1614, 2996 |
| Bst1107I | GTATAC | 1 cut(s) | 2542 |
| Bst2UI | CCWGG | 3 cut(s) | 472, 3019, 3858 |
| Bst4CI | ACNGT | 9 cut(s) | 409, 895, 1380, 1520, 2476, 2615, 2621, 2905, 3174 |
| Bst6I | CTCTTC | 6 cut(s) | 105, 114, 171, 1197, 2903, 3257 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 1247, 2189, 2837, 3632 |
| BstBI | TTCGAA | 2 cut(s) | 1102, 1348 |
| BstC8I | GCNNGC | 8 cut(s) | 561, 819, 1113, 1538, 1748, 2185, 2838, 3417 |
| BstDSI | CCRYGG | 1 cut(s) | 2996 |
| BstEII | GGTNACC | 2 cut(s) | 1440, 3679 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1587, 3482 |
| BstF5I | GGATG | 8 cut(s) | 337, 481, 1069, 2090, 2350, 3771, 3787, 3968 |
| BstFNI | CGCG | 2 cut(s) | 794, 3941 |
| BstHHI | GCGC | 2 cut(s) | 649, 2920 |
| BstKTI | GATC | 9 cut(s) | 148, 196, 355, 555, 744, 940, 2608, 3657, 3751 |
| BstMAI | GTCTC | 3 cut(s) | 1784, 1920, 2955 |
| BstMBI | GATC | 9 cut(s) | 145, 193, 352, 552, 741, 937, 2605, 3654, 3748 |
| BstNI | CCWGG | 3 cut(s) | 472, 3019, 3858 |
| BstNSI | RCATGY | 4 cut(s) | 821, 1115, 1779, 2187 |
| BstPI | GGTNACC | 2 cut(s) | 1440, 3679 |
| BstSCI | CCNGG | 4 cut(s) | 470, 2247, 3017, 3856 |
| BstUI | CGCG | 2 cut(s) | 794, 3941 |
| BstV2I | GAAGAC | 5 cut(s) | 63, 257, 1091, 1692, 2600 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3778 |
| BstZ17I | GTATAC | 1 cut(s) | 2542 |
| Bsu15I | ATCGAT | 2 cut(s) | 740, 2862 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2628 |
| BsuRI | GGCC | 4 cut(s) | 519, 972, 1613, 3911 |
| BsuTUI | ATCGAT | 2 cut(s) | 740, 2862 |
| BtgI | CCRYGG | 1 cut(s) | 2996 |
| BtgZI | GCGATG | 1 cut(s) | 76 |
| BtrI | CACGTC | 1 cut(s) | 3475 |
| BtsCI | GGATG | 8 cut(s) | 337, 481, 1069, 2090, 2350, 3771, 3787, 3968 |
| Cac8I | GCNNGC | 8 cut(s) | 561, 819, 1113, 1538, 1748, 2185, 2838, 3417 |
| CaiI | CAGNNNCTG | 3 cut(s) | 2603, 3041, 3259 |
| CfoI | GCGC | 2 cut(s) | 649, 2920 |
| Cfr10I | RCCGGY | 1 cut(s) | 3692 |
| Cfr13I | GGNCC | 5 cut(s) | 270, 1337, 1611, 3499, 3909 |
| ClaI | ATCGAT | 2 cut(s) | 740, 2862 |
| CseI | GACGC | 2 cut(s) | 800, 3707 |
| Csp6I | GTAC | 9 cut(s) | 202, 468, 718, 1381, 1458, 2622, 2809, 3128, 3828 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2011, 2046 |
| CviQI | GTAC | 9 cut(s) | 202, 468, 718, 1381, 1458, 2622, 2809, 3128, 3828 |
| DpnI | GATC | 9 cut(s) | 147, 195, 354, 554, 743, 939, 2607, 3656, 3750 |
| DpnII | GATC | 9 cut(s) | 145, 193, 352, 552, 741, 937, 2605, 3654, 3748 |
| DraI | TTTAAA | 1 cut(s) | 382 |
| Eam1104I | CTCTTC | 6 cut(s) | 105, 114, 171, 1197, 2903, 3257 |
| EarI | CTCTTC | 6 cut(s) | 105, 114, 171, 1197, 2903, 3257 |
| Eco130I | CCWWGG | 3 cut(s) | 1050, 1614, 2996 |
| Eco31I | GGTCTC | 1 cut(s) | 1920 |
| Eco32I | GATATC | 3 cut(s) | 1995, 2501, 3376 |
| Eco47I | GGWCC | 3 cut(s) | 270, 1337, 3499 |
| Eco57I | CTGAAG | 8 cut(s) | 1163, 1404, 2229, 2691, 2873, 3018, 3281, 3744 |
| Eco81I | CCTNAGG | 1 cut(s) | 2628 |
| Eco91I | GGTNACC | 2 cut(s) | 1440, 3679 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1587, 3482 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1611, 3909 |
| EcoO65I | GGTNACC | 2 cut(s) | 1440, 3679 |
| EcoRII | CCWGG | 3 cut(s) | 470, 3017, 3856 |
| EcoRV | GATATC | 3 cut(s) | 1995, 2501, 3376 |
| EcoT14I | CCWWGG | 3 cut(s) | 1050, 1614, 2996 |
| EcoT22I | ATGCAT | 2 cut(s) | 750, 2189 |
| ErhI | CCWWGG | 3 cut(s) | 1050, 1614, 2996 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 548, 580, 3581, 3613 |
| FaqI | GGGAC | 3 cut(s) | 90, 709, 965 |
| FauI | CCCGC | 1 cut(s) | 90 |
| FauNDI | CATATG | 2 cut(s) | 2303, 3466 |
| FbaI | TGATCA | 1 cut(s) | 2605 |
| FblI | GTMKAC | 2 cut(s) | 959, 2541 |
| FokI | GGATG | 8 cut(s) | 344, 468, 1076, 2077, 2337, 3778, 3794, 3955 |
| GlaI | GCGC | 2 cut(s) | 648, 2919 |
| GsaI | CCCAGC | 2 cut(s) | 804, 1877 |
| GsuI | CTGGAG | 3 cut(s) | 327, 1485, 2180 |
| HaeIII | GGCC | 4 cut(s) | 519, 972, 1613, 3911 |
| HapII | CCGG | 4 cut(s) | 2248, 2360, 3693, 3825 |
| HgaI | GACGC | 2 cut(s) | 800, 3707 |
| HhaI | GCGC | 2 cut(s) | 649, 2920 |
| Hin6I | GCGC | 2 cut(s) | 647, 2918 |
| HinP1I | GCGC | 2 cut(s) | 647, 2918 |
| HincII | GTYRAC | 2 cut(s) | 3843, 3889 |
| HindII | GTYRAC | 2 cut(s) | 3843, 3889 |
| HindIII | AAGCTT | 3 cut(s) | 557, 1040, 3344 |
| HpaI | GTTAAC | 1 cut(s) | 3889 |
| HpaII | CCGG | 4 cut(s) | 2248, 2360, 3693, 3825 |
| HphI | GGTGA | 6 cut(s) | 1085, 1434, 1985, 2435, 2437, 3707 |
| Hpy166II | GTNNAC | 8 cut(s) | 202, 757, 960, 1340, 2542, 2762, 3843, 3889 |
| Hpy8I | GTNNAC | 8 cut(s) | 202, 757, 960, 1340, 2542, 2762, 3843, 3889 |
| HpyCH4III | ACNGT | 9 cut(s) | 409, 895, 1380, 1520, 2476, 2615, 2621, 2905, 3174 |
| HpyCH4IV | ACGT | 2 cut(s) | 2025, 3474 |
| HpySE526I | ACGT | 2 cut(s) | 2025, 3474 |
| HspAI | GCGC | 2 cut(s) | 647, 2918 |
| Kpn2I | TCCGGA | 1 cut(s) | 2359 |
| KpnI | GGTACC | 1 cut(s) | 2625 |
| Ksp22I | TGATCA | 1 cut(s) | 2605 |
| KspAI | GTTAAC | 1 cut(s) | 3889 |
| Kzo9I | GATC | 9 cut(s) | 145, 193, 352, 552, 741, 937, 2605, 3654, 3748 |
| LguI | GCTCTTC | 2 cut(s) | 171, 1197 |
| LmnI | GCTCC | 4 cut(s) | 10, 160, 505, 1507 |
| MaeII | ACGT | 2 cut(s) | 2025, 3474 |
| MalI | GATC | 9 cut(s) | 147, 195, 354, 554, 743, 939, 2607, 3656, 3750 |
| MbiI | CCGCTC | 2 cut(s) | 85, 1138 |
| MboI | GATC | 9 cut(s) | 145, 193, 352, 552, 741, 937, 2605, 3654, 3748 |
| MfeI | CAATTG | 2 cut(s) | 1218, 1685 |
| MlyI | GAGTC | 7 cut(s) | 271, 434, 877, 1177, 3278, 3461, 3818 |
| MmeI | TCCRAC | 6 cut(s) | 453, 465, 1101, 1242, 2378, 3273 |
| Mph1103I | ATGCAT | 2 cut(s) | 750, 2189 |
| MroI | TCCGGA | 1 cut(s) | 2359 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1354, 2931 |
| MseI | TTAA | 9 cut(s) | 249, 381, 528, 1640, 3102, 3180, 3552, 3888, 3905 |
| MslI | CAYNNNNRTG | 7 cut(s) | 344, 372, 730, 762, 822, 990, 2906 |
| MspA1I | CMGCKG | 1 cut(s) | 3415 |
| MspI | CCGG | 4 cut(s) | 2248, 2360, 3693, 3825 |
| MspR9I | CCNGG | 4 cut(s) | 472, 2249, 3019, 3858 |
| MunI | CAATTG | 2 cut(s) | 1218, 1685 |
| Mva1269I | GAATGC | 5 cut(s) | 646, 1021, 1207, 3058, 3419 |
| MvaI | CCWGG | 3 cut(s) | 472, 3019, 3858 |
| MvnI | CGCG | 2 cut(s) | 794, 3941 |
| NciI | CCSGG | 1 cut(s) | 2249 |
| NcoI | CCATGG | 1 cut(s) | 2996 |
| NdeI | CATATG | 2 cut(s) | 2303, 3466 |
| NdeII | GATC | 9 cut(s) | 145, 193, 352, 552, 741, 937, 2605, 3654, 3748 |
| NlaIV | GGNNCC | 8 cut(s) | 6, 80, 507, 2163, 2623, 2731, 2978, 3304 |
| NmeAIII | GCCGAG | 1 cut(s) | 2068 |
| NmuCI | GTSAC | 6 cut(s) | 337, 457, 1440, 1498, 3619, 3695 |
| NsiI | ATGCAT | 2 cut(s) | 750, 2189 |
| NspI | RCATGY | 4 cut(s) | 821, 1115, 1779, 2187 |
| NspV | TTCGAA | 2 cut(s) | 1102, 1348 |
| OliI | CACNNNNGTG | 2 cut(s) | 344, 2906 |
| PaeI | GCATGC | 3 cut(s) | 821, 1115, 2187 |
| PciSI | GCTCTTC | 2 cut(s) | 171, 1197 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 123, 1703 |
| PctI | GAATGC | 5 cut(s) | 646, 1021, 1207, 3058, 3419 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1354, 2931 |
| PflFI | GACNNNGTC | 1 cut(s) | 3772 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 721, 989 |
| PleI | GAGTC | 7 cut(s) | 270, 433, 876, 1176, 3277, 3460, 3817 |
| PpsI | GAGTC | 7 cut(s) | 270, 433, 876, 1176, 3277, 3460, 3817 |
| PsiI | TTATAA | 1 cut(s) | 1005 |
| Psp6I | CCWGG | 3 cut(s) | 470, 3017, 3856 |
| PspEI | GGTNACC | 2 cut(s) | 1440, 3679 |
| PspFI | CCCAGC | 2 cut(s) | 800, 1873 |
| PspGI | CCWGG | 3 cut(s) | 470, 3017, 3856 |
| PspN4I | GGNNCC | 8 cut(s) | 6, 80, 507, 2163, 2623, 2731, 2978, 3304 |
| PspPI | GGNCC | 5 cut(s) | 270, 1337, 1611, 3499, 3909 |
| PstNI | CAGNNNCTG | 3 cut(s) | 2603, 3041, 3259 |
| PsyI | GACNNNGTC | 1 cut(s) | 3772 |
| PvuII | CAGCTG | 1 cut(s) | 3415 |
| RsaI | GTAC | 9 cut(s) | 203, 469, 719, 1382, 1459, 2623, 2810, 3129, 3829 |
| RsaNI | GTAC | 9 cut(s) | 202, 468, 718, 1381, 1458, 2622, 2809, 3128, 3828 |
| RseI | CAYNNNNRTG | 7 cut(s) | 344, 372, 730, 762, 822, 990, 2906 |
| SapI | GCTCTTC | 2 cut(s) | 171, 1197 |
| SaqAI | TTAA | 9 cut(s) | 249, 381, 528, 1640, 3102, 3180, 3552, 3888, 3905 |
| Sau3AI | GATC | 9 cut(s) | 145, 193, 352, 552, 741, 937, 2605, 3654, 3748 |
| Sau96I | GGNCC | 5 cut(s) | 270, 1337, 1611, 3499, 3909 |
| SchI | GAGTC | 7 cut(s) | 271, 434, 877, 1177, 3278, 3461, 3818 |
| ScrFI | CCNGG | 4 cut(s) | 472, 2249, 3019, 3858 |
| SfuI | TTCGAA | 2 cut(s) | 1102, 1348 |
| SinI | GGWCC | 3 cut(s) | 270, 1337, 3499 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 344, 372, 730, 762, 822, 990, 2906 |
| SmlI | CTYRAG | 5 cut(s) | 321, 1133, 1628, 1809, 1940 |
| SmoI | CTYRAG | 5 cut(s) | 321, 1133, 1628, 1809, 1940 |
| SphI | GCATGC | 3 cut(s) | 821, 1115, 2187 |
| SsiI | CCGC | 4 cut(s) | 83, 520, 794, 1138 |
| SspI | AATATT | 2 cut(s) | 1921, 3821 |
| StyD4I | CCNGG | 4 cut(s) | 470, 2247, 3017, 3856 |
| StyI | CCWWGG | 3 cut(s) | 1050, 1614, 2996 |
| TaaI | ACNGT | 9 cut(s) | 409, 895, 1380, 1520, 2476, 2615, 2621, 2905, 3174 |
| TaiI | ACGT | 2 cut(s) | 2028, 3477 |
| TaqI | TCGA | 7 cut(s) | 87, 117, 740, 1102, 1144, 1348, 2862 |
| TaqII | GACCGA | 1 cut(s) | 258 |
| TatI | WGTACW | 4 cut(s) | 201, 717, 1380, 1457 |
| TauI | GCSGC | 1 cut(s) | 522 |
| Tru1I | TTAA | 9 cut(s) | 249, 381, 528, 1640, 3102, 3180, 3552, 3888, 3905 |
| Tru9I | TTAA | 9 cut(s) | 249, 381, 528, 1640, 3102, 3180, 3552, 3888, 3905 |
| TseFI | GTSAC | 6 cut(s) | 337, 457, 1440, 1498, 3619, 3695 |
| Tsp45I | GTSAC | 6 cut(s) | 337, 457, 1440, 1498, 3619, 3695 |
| TspGWI | ACGGA | 1 cut(s) | 1772 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3772 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 721, 989 |
| VpaK11BI | GGWCC | 3 cut(s) | 270, 1337, 3499 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1587, 3482 |
| XapI | RAATTY | 9 cut(s) | 595, 1125, 1300, 2364, 2580, 2743, 2788, 2869, 3639 |
| XbaI | TCTAGA | 2 cut(s) | 256, 3797 |
| XceI | RCATGY | 4 cut(s) | 821, 1115, 1779, 2187 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2301, 2533 |
| XmiI | GTMKAC | 2 cut(s) | 959, 2541 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1354, 2931 |
| Zsp2I | ATGCAT | 2 cut(s) | 750, 2189 |