Prupe.7G244800_v2.0.a1

Phosphatidylinositol phosphatidylcholine transfer protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
20900227 .. 20900562
336 bp
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UTR
Exon/CDS
Intron
Prupe.7G244800.1

Sequence Viewer

Length: 336 bp
ATGTCTGGACCTCTATCTCCAAAACCATTGTCCGGTTCGTTGAAGAAAAAAGCAATGAATGCCTCTGCCAAGTTGAGAAATTCTTTGTCAAGAAGGAGTAGAAGAATCAGTATAGTCATCGCCGACGCCGTGGAAATCGGTGATGTGCACGACCCGGAGGAGTTGCAGTCTGTTGAGGCCTTCCGTCAGGCACTCATATTGGAGGAGCTTCTTCCTTCCAAGCACGATGATTATCACATAATGCTTCGATTCTTGAAGGCCAGCAAAATTCGATATGGAGAAAACCAAGCAAATGTGGTCAGACATGCTCCAGTGGAGGAAGGCATTCGGTGCTGA

Protein Analysis

112

Amino Acids

12.43

Weight (kDa)

9.46

Isoelectric Point (pI)

67.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0021173)

Species Orthologous Gene IDs
malus_domestica MD02G1140900.v1.1
prunus_persica Prupe.7G244800_v2.0.a1
pyrus_communis pycom05g05410
rosa_roxburghii Rroxscaffold_7G00202410
rosa_samantha Rh6DG125400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 79, 267
AcyI GRCGYC 1 cut(s) 126
AfiI CCNNNNNNNGG 1 cut(s) 32
AgsI TTSAA 2 cut(s) 43, 256
AluBI AGCT 1 cut(s) 208
AluI AGCT 1 cut(s) 208
Alw21I GWGCWC 1 cut(s) 150
Alw44I GTGCAC 1 cut(s) 146
AoxI GGCC 2 cut(s) 177, 258
ApaLI GTGCAC 1 cut(s) 146
ApoI RAATTY 2 cut(s) 79, 267
ArsI GACNNNNNNTTYG 2 cut(s) 14, 46
Asp700I GAANNNNTTC 1 cut(s) 324
AspS9I GGNCC 1 cut(s) 8
AsuC2I CCSGG 1 cut(s) 155
AsuHPI GGTGA 1 cut(s) 152
AvaII GGWCC 1 cut(s) 8
BaeGI GKGCMC 1 cut(s) 150
Bbv12I GWGCWC 1 cut(s) 150
BceAI ACGGC 1 cut(s) 113
BcnI CCSGG 1 cut(s) 155
Bme1390I CCNGG 1 cut(s) 155
Bme18I GGWCC 1 cut(s) 8
BmgT120I GGNCC 1 cut(s) 8
BmrFI CCNGG 1 cut(s) 155
BpmI CTGGAG 1 cut(s) 294
BpuMI CCSGG 1 cut(s) 155
BsaBI GATNNNNATC 1 cut(s) 231
BsaHI GRCGYC 1 cut(s) 126
BsaJI CCNNGG 1 cut(s) 129
BsaWI WCCGGW 1 cut(s) 32
BsaXI ACNNNNNCTCC 2 cut(s) 152, 182
Bsc4I CCNNNNNNNGG 1 cut(s) 32
Bse1I ACTGG 1 cut(s) 311
Bse3DI GCAATG 1 cut(s) 60
Bse8I GATNNNNATC 1 cut(s) 231
BseDI CCNNGG 1 cut(s) 129
BseJI GATNNNNATC 1 cut(s) 231
BseLI CCNNNNNNNGG 1 cut(s) 32
BseMI GCAATG 1 cut(s) 60
BseNI ACTGG 1 cut(s) 311
BseRI GAGGAG 2 cut(s) 173, 218
BseSI GKGCMC 1 cut(s) 150
BshFI GGCC 2 cut(s) 179, 260
BsiHKAI GWGCWC 1 cut(s) 150
BsiSI CCGG 2 cut(s) 33, 155
BslI CCNNNNNNNGG 1 cut(s) 32
BsmI GAATGC 2 cut(s) 64, 324
BsnI GGCC 2 cut(s) 179, 260
Bsp1286I GDGCHC 1 cut(s) 150
BspANI GGCC 2 cut(s) 179, 260
BsrDI GCAATG 1 cut(s) 60
BsrI ACTGG 1 cut(s) 311
BssECI CCNNGG 1 cut(s) 129
BssNI GRCGYC 1 cut(s) 126
BstACI GRCGYC 1 cut(s) 126
BstAPI GCANNNNNTGC 2 cut(s) 59, 330
BstC8I GCNNGC 1 cut(s) 262
BstDSI CCRYGG 1 cut(s) 129
BstMWI GCNNNNNNNGC 2 cut(s) 59, 330
BstNSI RCATGY 1 cut(s) 308
BstSCI CCNGG 1 cut(s) 153
BstSLI GKGCMC 1 cut(s) 150
BsuRI GGCC 2 cut(s) 179, 260
BtgI CCRYGG 1 cut(s) 129
BtgZI GCGATG 1 cut(s) 103
BtsIMutI CAGTG 1 cut(s) 318
Cac8I GCNNGC 1 cut(s) 262
Cfr13I GGNCC 1 cut(s) 8
CseI GACGC 1 cut(s) 134
CviAII CATG 1 cut(s) 305
CviJI RGCY 3 cut(s) 179, 208, 260
CviKI_1 RGCY 3 cut(s) 179, 208, 260
Eco147I AGGCCT 1 cut(s) 179
Eco47I GGWCC 1 cut(s) 8
FaeI CATG 1 cut(s) 308
FaiI YATR 5 cut(s) 113, 197, 239, 276, 306
FatI CATG 1 cut(s) 304
GsuI CTGGAG 1 cut(s) 294
HaeIII GGCC 2 cut(s) 179, 260
HapII CCGG 2 cut(s) 33, 155
HgaI GACGC 1 cut(s) 134
Hin1I GRCGYC 1 cut(s) 126
Hin1II CATG 1 cut(s) 308
HinfI GANTC 2 cut(s) 105, 249
HpaII CCGG 2 cut(s) 33, 155
HphI GGTGA 1 cut(s) 152
Hpy166II GTNNAC 1 cut(s) 148
Hpy188I TCNGA 1 cut(s) 302
Hpy188III TCNNGA 3 cut(s) 6, 90, 253
Hpy8I GTNNAC 1 cut(s) 148
Hpy99I CGWCG 1 cut(s) 128
HpyAV CCTTC 5 cut(s) 87, 190, 225, 250, 314
HpyCH4V TGCA 2 cut(s) 148, 166
HpyF10VI GCNNNNNNNGC 2 cut(s) 59, 330
Hsp92I GRCGYC 1 cut(s) 126
Hsp92II CATG 1 cut(s) 308
LmnI GCTCC 2 cut(s) 205, 313
LpnPI CCDG 5 cut(s) 46, 168, 173, 274, 324
MboII GAAGA 3 cut(s) 55, 114, 203
MhlI GDGCHC 1 cut(s) 150
MluCI AATT 2 cut(s) 79, 267
MnlI CCTC 6 cut(s) 21, 73, 151, 169, 196, 310
MroXI GAANNNNTTC 1 cut(s) 324
MspI CCGG 2 cut(s) 33, 155
MspR9I CCNGG 1 cut(s) 155
Mva1269I GAATGC 2 cut(s) 64, 324
MwoI GCNNNNNNNGC 2 cut(s) 59, 330
NciI CCSGG 1 cut(s) 155
NlaIII CATG 1 cut(s) 308
NspI RCATGY 1 cut(s) 308
PceI AGGCCT 1 cut(s) 179
PcsI WCGNNNNNNNCGW 1 cut(s) 126
PctI GAATGC 2 cut(s) 64, 324
PdmI GAANNNNTTC 1 cut(s) 324
PfeI GAWTC 2 cut(s) 105, 249
PspPI GGNCC 1 cut(s) 8
Sau96I GGNCC 1 cut(s) 8
ScrFI CCNGG 1 cut(s) 155
SduI GDGCHC 1 cut(s) 150
SetI ASST 2 cut(s) 13, 210
SinI GGWCC 1 cut(s) 8
Sse9I AATT 2 cut(s) 79, 267
SseBI AGGCCT 1 cut(s) 179
StuI AGGCCT 1 cut(s) 179
StyD4I CCNGG 1 cut(s) 153
TaqI TCGA 2 cut(s) 247, 271
TasI AATT 2 cut(s) 79, 267
TfiI GAWTC 2 cut(s) 105, 249
TscAI CASTG 1 cut(s) 318
TspDTI ATGAA 1 cut(s) 71
TspGWI ACGGA 1 cut(s) 173
TspRI CASTG 1 cut(s) 318
VneI GTGCAC 1 cut(s) 146
VpaK11BI GGWCC 1 cut(s) 8
XapI RAATTY 2 cut(s) 79, 267
XceI RCATGY 1 cut(s) 308
XmnI GAANNNNTTC 1 cut(s) 324
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.