Prupe.7G251100_v2.0.a1

lipid catabolic process

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
21212500 .. 21214696
2197 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G251100.1

Sequence Viewer

Length: 1212 bp
ATGGAGAAAACAAAATCATCCCTTCATGGTCGCGCTAACGGAAGTCTCACCACTGTTCTTTCTATTGATGGAGGTGGAATAAGAGGGATTATTCCAGGAGTTATGCTTGCATTCCTAGAGTCTAAGCTTCAGAAGATAGATGGTGATCATGTAAGGCTTGCAGATTATCTTGATTGGGTTGTAGGGACGAGCACAGGTGGCCTTATGGCATCCATGCTTACTACCCCAGATAAAAATAATCGCCCCTTATATGCTGCAAAAGATATCGTCTCCTTTTATCGCCAACACTGCCCAAAGATCTTCCCCCAACCCAGCTCTCGCATTGGCAAAATCATACAGTATTTGAAATGTTTAGTAAGGCCCAAATATAATGGGAAGTATTTACGTAAGCTGTTGAAGAAAATACTAGGAGACAAACATTTGCATGACATGTTGACTAACGTTGCAATCACAGCTACTGATATAAAGCAAGGACATCCAGTTATTTTCTCCAGCCATATGTTGAAAAAGGATCCCAGCCTAGATGCTTTGATGTCGGATATATGTGTTGCAACTTCAGCAGCCCCAGCCTACCTTCCACCTCATCAATTTACTACCACAACTTCAACAGGCGAATCAAGAGAATTCAATCTCGTTGATGGTGGAATTGCTGCCAATAACCCGGCCATGGTTGGTATAACCGAATCGGAAACAGACATGCAGGAGGGCAACACTGGCATCCATGAGCGGGTCTTACTTATATCACTGGGGACTGGTATGACATCTGAGAAGAAGTACGATGCCAAAAAAGCAGCTTGTTGGGGTGCTCTGGATTGGCTGATCGGAAAAGATCGTTCGGCTCCACTGGTGGATCTTCTTACTAGAGTAAATAGTGACATGGTTGCGTTCTACAGTGGTTCCTTTTTTGAAGCTCTTCAGTCTAAAGGCAATTACCTCCGAATTCAGGACGATACACTAAGTGGAACATTGGCTTCTGTGGATATTGCCACCGAAGAAAACTTGAATGATCTTGTAAAAGTTGGAGAGGCATTGTTGAAGAAACCCGTTTTGAGATTGAATTTTGGTACCGGTAAACTCGAGCTTGTTCATCCTGAGGTTACAAATGAAGTGGCTCTCGAGAGGATGGCGAAAATTCTCTCTGAGGAGAGGGCTCGGAGGAAGAGGGTGGTCGTTCACGAAAATGCTGCTTTGCTCTCACATAAGTCCTTGTAG

Protein Analysis

404

Amino Acids

44.17

Weight (kDa)

8.93

Isoelectric Point (pI)

29.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1064
AccB1I GGYRCC 1 cut(s) 1064
AccBSI CCGCTC 1 cut(s) 727
AccII CGCG 1 cut(s) 33
AciI CCGC 1 cut(s) 727
AclI AACGTT 1 cut(s) 441
AclWI GGATC 3 cut(s) 506, 519, 858
AcoI YGGCCR 1 cut(s) 663
AcsI RAATTY 4 cut(s) 623, 939, 1057, 1131
AcuI CTGAAG 3 cut(s) 113, 540, 899
AdeI CACNNNGTG 1 cut(s) 959
AfaI GTAC 2 cut(s) 776, 1066
AfiI CCNNNNNNNGG 3 cut(s) 667, 727, 943
AflIII ACRYGT 1 cut(s) 429
AgeI ACCGGT 1 cut(s) 1067
AgsI TTSAA 9 cut(s) 346, 397, 505, 606, 628, 908, 1003, 1036, 1057
AjnI CCWGG 1 cut(s) 94
AluBI AGCT 7 cut(s) 127, 315, 391, 455, 794, 911, 1081
AluI AGCT 7 cut(s) 127, 315, 391, 455, 794, 911, 1081
Alw21I GWGCWC 2 cut(s) 194, 808
Alw26I GTCTC 3 cut(s) 50, 274, 405
AlwI GGATC 3 cut(s) 506, 519, 858
AlwNI CAGNNNCTG 1 cut(s) 458
Ama87I CYCGRG 2 cut(s) 1076, 1115
AoxI GGCC 3 cut(s) 199, 359, 663
ApeKI GCWGC 5 cut(s) 254, 560, 650, 791, 1184
ApoI RAATTY 4 cut(s) 623, 939, 1057, 1131
AsiGI ACCGGT 1 cut(s) 1067
Asp700I GAANNNNTTC 1 cut(s) 912
Asp718I GGTACC 1 cut(s) 1064
AspLEI GCGC 1 cut(s) 35
AspS9I GGNCC 1 cut(s) 360
AsuC2I CCSGG 1 cut(s) 662
AsuHPI GGTGA 2 cut(s) 40, 155
AvaI CYCGRG 2 cut(s) 1076, 1115
AxyI CCTNAGG 1 cut(s) 1092
BamHI GGATCC 1 cut(s) 511
BanI GGYRCC 1 cut(s) 1064
BanII GRGCYC 1 cut(s) 1153
Bbv12I GWGCWC 2 cut(s) 194, 808
BbvI GCAGC 5 cut(s) 241, 572, 637, 803, 1171
BccI CCATC 4 cut(s) 62, 134, 632, 1117
BcgI CGANNNNNNTGC 2 cut(s) 1166, 1200
BciT130I CCWGG 1 cut(s) 96
BclI TGATCA 1 cut(s) 145
BcnI CCSGG 1 cut(s) 662
BcoDI GTCTC 3 cut(s) 50, 274, 405
BfaI CTAG 4 cut(s) 116, 407, 521, 861
BfmI CTRYAG 1 cut(s) 889
BglII AGATCT 1 cut(s) 297
BisI GCNGC 5 cut(s) 255, 561, 651, 792, 1185
BlsI GCNGC 5 cut(s) 256, 562, 652, 793, 1186
Bme1390I CCNGG 2 cut(s) 96, 662
BmeT110I CYCGRG 2 cut(s) 1076, 1115
BmgT120I GGNCC 1 cut(s) 360
BmiI GGNNCC 4 cut(s) 513, 840, 898, 1066
BmrFI CCNGG 2 cut(s) 96, 662
BmrI ACTGGG 1 cut(s) 755
BmsI GCATC 4 cut(s) 218, 514, 726, 769
BmuI ACTGGG 1 cut(s) 755
BpmI CTGGAG 1 cut(s) 475
BpuMI CCSGG 1 cut(s) 662
BsaAI YACGTR 1 cut(s) 386
BsaBI GATNNNNATC 1 cut(s) 144
BsaJI CCNNGG 1 cut(s) 666
BsaWI WCCGGW 1 cut(s) 1067
Bsc4I CCNNNNNNNGG 3 cut(s) 667, 727, 943
Bse118I RCCGGY 1 cut(s) 1067
Bse1I ACTGG 5 cut(s) 479, 718, 750, 757, 849
Bse21I CCTNAGG 1 cut(s) 1092
Bse8I GATNNNNATC 1 cut(s) 144
BseBI CCWGG 1 cut(s) 96
BseDI CCNNGG 1 cut(s) 666
BseGI GGATG 6 cut(s) 17, 209, 475, 717, 1087, 1128
BseJI GATNNNNATC 1 cut(s) 144
BseLI CCNNNNNNNGG 3 cut(s) 667, 727, 943
BseMII CTCAG 3 cut(s) 756, 1083, 1131
BseNI ACTGG 5 cut(s) 479, 718, 750, 757, 849
BseRI GAGGAG 1 cut(s) 1157
BseXI GCAGC 5 cut(s) 241, 572, 637, 803, 1171
BseYI CCCAGC 3 cut(s) 311, 515, 565
Bsh1236I CGCG 1 cut(s) 33
BshFI GGCC 3 cut(s) 201, 361, 665
BshNI GGYRCC 1 cut(s) 1064
BshTI ACCGGT 1 cut(s) 1067
BsiHKAI GWGCWC 2 cut(s) 194, 808
BsiHKCI CYCGRG 2 cut(s) 1076, 1115
BsiSI CCGG 2 cut(s) 662, 1068
BslFI GGGAC 2 cut(s) 199, 763
BslI CCNNNNNNNGG 3 cut(s) 667, 727, 943
BsmAI GTCTC 3 cut(s) 50, 274, 405
BsmBI CGTCTC 1 cut(s) 274
BsmFI GGGAC 2 cut(s) 199, 763
BsmI GAATGC 1 cut(s) 110
BsnI GGCC 3 cut(s) 201, 361, 665
BsoBI CYCGRG 2 cut(s) 1076, 1115
Bsp1286I GDGCHC 3 cut(s) 194, 808, 1153
Bsp143I GATC 7 cut(s) 145, 297, 511, 819, 829, 850, 1006
Bsp19I CCATGG 1 cut(s) 666
BspACI CCGC 1 cut(s) 727
BspANI GGCC 3 cut(s) 201, 361, 665
BspCNI CTCAG 3 cut(s) 757, 1084, 1132
BspFNI CGCG 1 cut(s) 33
BspLI GGNNCC 4 cut(s) 513, 840, 898, 1066
BspPI GGATC 3 cut(s) 506, 519, 858
BspQI GCTCTTC 1 cut(s) 918
BspT107I GGYRCC 1 cut(s) 1064
BsrBI CCGCTC 1 cut(s) 727
BsrFI RCCGGY 1 cut(s) 1067
BsrI ACTGG 5 cut(s) 479, 718, 750, 757, 849
BssAI RCCGGY 1 cut(s) 1067
BssECI CCNNGG 1 cut(s) 666
BssMI GATC 7 cut(s) 145, 297, 511, 819, 829, 850, 1006
BssT1I CCWWGG 1 cut(s) 666
Bst2UI CCWGG 1 cut(s) 96
Bst4CI ACNGT 3 cut(s) 55, 339, 893
Bst6I CTCTTC 2 cut(s) 918, 1154
BstBAI YACGTR 1 cut(s) 386
BstC8I GCNNGC 2 cut(s) 108, 159
BstDEI CTNAG 5 cut(s) 123, 765, 956, 1092, 1140
BstDSI CCRYGG 1 cut(s) 666
BstF5I GGATG 6 cut(s) 17, 209, 475, 717, 1087, 1128
BstFNI CGCG 1 cut(s) 33
BstHHI GCGC 1 cut(s) 35
BstKTI GATC 7 cut(s) 148, 300, 514, 822, 832, 853, 1009
BstMAI GTCTC 3 cut(s) 50, 274, 405
BstMBI GATC 7 cut(s) 145, 297, 511, 819, 829, 850, 1006
BstMWI GCNNNNNNNGC 7 cut(s) 198, 288, 452, 557, 566, 714, 788
BstNI CCWGG 1 cut(s) 96
BstNSI RCATGY 2 cut(s) 433, 700
BstSCI CCNGG 2 cut(s) 94, 660
BstSFI CTRYAG 1 cut(s) 889
BstSNI TACGTA 1 cut(s) 386
BstUI CGCG 1 cut(s) 33
BstV1I GCAGC 5 cut(s) 241, 572, 637, 803, 1171
BstX2I RGATCY 3 cut(s) 297, 511, 850
BstYI RGATCY 3 cut(s) 297, 511, 850
Bsu36I CCTNAGG 1 cut(s) 1092
BsuRI GGCC 3 cut(s) 201, 361, 665
BtgI CCRYGG 1 cut(s) 666
BtsCI GGATG 6 cut(s) 17, 209, 475, 717, 1087, 1128
BtsI GCAGTG 1 cut(s) 286
BtsIMutI CAGTG 6 cut(s) 51, 286, 711, 743, 842, 898
Cac8I GCNNGC 2 cut(s) 108, 159
CaiI CAGNNNCTG 1 cut(s) 458
CfoI GCGC 1 cut(s) 35
Cfr10I RCCGGY 1 cut(s) 1067
Cfr13I GGNCC 1 cut(s) 360
Csp6I GTAC 2 cut(s) 775, 1065
CspAI ACCGGT 1 cut(s) 1067
CspCI CAANNNNNGTGG 2 cut(s) 1089, 1124
CviAII CATG 9 cut(s) 26, 149, 214, 425, 430, 667, 697, 722, 877
CviQI GTAC 2 cut(s) 775, 1065
DdeI CTNAG 5 cut(s) 123, 765, 956, 1092, 1140
DpnI GATC 7 cut(s) 147, 299, 513, 821, 831, 852, 1008
DpnII GATC 7 cut(s) 145, 297, 511, 819, 829, 850, 1006
DraIII CACNNNGTG 1 cut(s) 959
EaeI YGGCCR 1 cut(s) 663
Eam1104I CTCTTC 2 cut(s) 918, 1154
EarI CTCTTC 2 cut(s) 918, 1154
Eco105I TACGTA 1 cut(s) 386
Eco130I CCWWGG 1 cut(s) 666
Eco24I GRGCYC 1 cut(s) 1153
Eco32I GATATC 1 cut(s) 265
Eco57I CTGAAG 3 cut(s) 113, 540, 899
Eco81I CCTNAGG 1 cut(s) 1092
Eco88I CYCGRG 2 cut(s) 1076, 1115
EcoRI GAATTC 2 cut(s) 623, 939
EcoRII CCWGG 1 cut(s) 94
EcoRV GATATC 1 cut(s) 265
EcoT14I CCWWGG 1 cut(s) 666
EcoT38I GRGCYC 1 cut(s) 1153
ErhI CCWWGG 1 cut(s) 666
Esp3I CGTCTC 1 cut(s) 274
FaeI CATG 9 cut(s) 29, 152, 217, 428, 433, 670, 700, 725, 880
FaqI GGGAC 2 cut(s) 199, 763
FatI CATG 9 cut(s) 25, 148, 213, 424, 429, 666, 696, 721, 876
FauI CCCGC 1 cut(s) 720
FauNDI CATATG 1 cut(s) 498
FbaI TGATCA 1 cut(s) 145
Fnu4HI GCNGC 5 cut(s) 255, 561, 651, 792, 1185
FokI GGATG 6 cut(s) 4, 196, 462, 704, 1074, 1135
FriOI GRGCYC 1 cut(s) 1153
Fsp4HI GCNGC 5 cut(s) 255, 561, 651, 792, 1185
FspBI CTAG 4 cut(s) 116, 407, 521, 861
GlaI GCGC 1 cut(s) 34
GluI GCNGC 5 cut(s) 255, 561, 651, 792, 1185
GsaI CCCAGC 3 cut(s) 315, 519, 569
GsuI CTGGAG 1 cut(s) 475
HaeIII GGCC 3 cut(s) 201, 361, 665
HapII CCGG 2 cut(s) 662, 1068
HhaI GCGC 1 cut(s) 35
Hin1II CATG 9 cut(s) 29, 152, 217, 428, 433, 670, 700, 725, 880
Hin6I GCGC 1 cut(s) 33
HinP1I GCGC 1 cut(s) 33
HincII GTYRAC 1 cut(s) 435
HindII GTYRAC 1 cut(s) 435
HindIII AAGCTT 1 cut(s) 125
HinfI GANTC 3 cut(s) 119, 614, 683
HpaII CCGG 2 cut(s) 662, 1068
HphI GGTGA 2 cut(s) 40, 155
Hpy166II GTNNAC 3 cut(s) 435, 1073, 1174
Hpy188I TCNGA 8 cut(s) 132, 538, 688, 766, 824, 938, 1141, 1155
Hpy188III TCNNGA 8 cut(s) 170, 618, 809, 944, 1091, 1115, 1117, 1175
Hpy8I GTNNAC 3 cut(s) 435, 1073, 1174
HpyAV CCTTC 2 cut(s) 32, 584
HpyCH4III ACNGT 3 cut(s) 55, 339, 893
HpyCH4IV ACGT 2 cut(s) 385, 441
HpyCH4V TGCA 7 cut(s) 110, 161, 257, 424, 446, 551, 700
HpyF10VI GCNNNNNNNGC 7 cut(s) 198, 288, 452, 557, 566, 714, 788
HpyF3I CTNAG 5 cut(s) 123, 765, 956, 1092, 1140
HpySE526I ACGT 2 cut(s) 385, 441
Hsp92II CATG 9 cut(s) 29, 152, 217, 428, 433, 670, 700, 725, 880
HspAI GCGC 1 cut(s) 33
KpnI GGTACC 1 cut(s) 1068
Ksp22I TGATCA 1 cut(s) 145
Kzo9I GATC 7 cut(s) 145, 297, 511, 819, 829, 850, 1006
LguI GCTCTTC 1 cut(s) 918
LmnI GCTCC 1 cut(s) 844
Lsp1109I GCAGC 5 cut(s) 241, 572, 637, 803, 1171
LweI GCATC 4 cut(s) 218, 514, 726, 769
MaeI CTAG 4 cut(s) 116, 407, 521, 861
MaeII ACGT 2 cut(s) 385, 441
MaeIII GTNAC 2 cut(s) 872, 1096
MalI GATC 7 cut(s) 147, 299, 513, 821, 831, 852, 1008
MbiI CCGCTC 1 cut(s) 727
MboI GATC 7 cut(s) 145, 297, 511, 819, 829, 850, 1006
MboII GAAGA 9 cut(s) 145, 292, 409, 781, 845, 905, 1004, 1048, 1171
MflI RGATCY 3 cut(s) 297, 511, 850
MhlI GDGCHC 3 cut(s) 194, 808, 1153
MluCI AATT 7 cut(s) 587, 623, 645, 928, 939, 1057, 1131
MlyI GAGTC 1 cut(s) 128
MmeI TCCRAC 2 cut(s) 516, 1000
MroXI GAANNNNTTC 1 cut(s) 912
MslI CAYNNNNRTG 2 cut(s) 423, 1179
MspI CCGG 2 cut(s) 662, 1068
MspR9I CCNGG 2 cut(s) 96, 662
Mva1269I GAATGC 1 cut(s) 110
MvaI CCWGG 1 cut(s) 96
MvnI CGCG 1 cut(s) 33
MwoI GCNNNNNNNGC 7 cut(s) 198, 288, 452, 557, 566, 714, 788
NciI CCSGG 1 cut(s) 662
NcoI CCATGG 1 cut(s) 666
NdeI CATATG 1 cut(s) 498
NdeII GATC 7 cut(s) 145, 297, 511, 819, 829, 850, 1006
NlaIII CATG 9 cut(s) 29, 152, 217, 428, 433, 670, 700, 725, 880
NlaIV GGNNCC 4 cut(s) 513, 840, 898, 1066
NmuCI GTSAC 1 cut(s) 872
NspI RCATGY 2 cut(s) 433, 700
PaeR7I CTCGAG 2 cut(s) 1076, 1115
PciI ACATGT 1 cut(s) 429
PciSI GCTCTTC 1 cut(s) 918
PctI GAATGC 1 cut(s) 110
PdmI GAANNNNTTC 1 cut(s) 912
PfeI GAWTC 2 cut(s) 614, 683
PfoI TCCNGGA 1 cut(s) 94
PinAI ACCGGT 1 cut(s) 1067
PkrI GCNGC 5 cut(s) 256, 562, 652, 793, 1186
PleI GAGTC 1 cut(s) 127
PpsI GAGTC 1 cut(s) 127
Ppu21I YACGTR 1 cut(s) 386
PscI ACATGT 1 cut(s) 429
Psp1406I AACGTT 1 cut(s) 441
Psp6I CCWGG 1 cut(s) 94
PspFI CCCAGC 3 cut(s) 311, 515, 565
PspGI CCWGG 1 cut(s) 94
PspN4I GGNNCC 4 cut(s) 513, 840, 898, 1066
PspPI GGNCC 1 cut(s) 360
PspXI VCTCGAGB 1 cut(s) 1076
PstNI CAGNNNCTG 1 cut(s) 458
PsuI RGATCY 3 cut(s) 297, 511, 850
RsaI GTAC 2 cut(s) 776, 1066
RsaNI GTAC 2 cut(s) 775, 1065
RseI CAYNNNNRTG 2 cut(s) 423, 1179
SapI GCTCTTC 1 cut(s) 918
SatI GCNGC 5 cut(s) 255, 561, 651, 792, 1185
Sau3AI GATC 7 cut(s) 145, 297, 511, 819, 829, 850, 1006
Sau96I GGNCC 1 cut(s) 360
SchI GAGTC 1 cut(s) 128
ScrFI CCNGG 2 cut(s) 96, 662
SduI GDGCHC 3 cut(s) 194, 808, 1153
SfaNI GCATC 4 cut(s) 218, 514, 726, 769
SfcI CTRYAG 1 cut(s) 889
Sfr274I CTCGAG 2 cut(s) 1076, 1115
SlaI CTCGAG 2 cut(s) 1076, 1115
SmiMI CAYNNNNRTG 2 cut(s) 423, 1179
SmlI CTYRAG 2 cut(s) 1076, 1115
SmoI CTYRAG 2 cut(s) 1076, 1115
SnaBI TACGTA 1 cut(s) 386
Sse9I AATT 7 cut(s) 587, 623, 645, 928, 939, 1057, 1131
SsiI CCGC 1 cut(s) 727
SspMI CTAG 4 cut(s) 116, 407, 521, 861
StyD4I CCNGG 2 cut(s) 94, 660
StyI CCWWGG 1 cut(s) 666
TaaI ACNGT 3 cut(s) 55, 339, 893
TaiI ACGT 2 cut(s) 388, 444
TaqI TCGA 2 cut(s) 1077, 1116
TasI AATT 7 cut(s) 587, 623, 645, 928, 939, 1057, 1131
TfiI GAWTC 2 cut(s) 614, 683
TscAI CASTG 6 cut(s) 58, 293, 718, 750, 849, 898
TseFI GTSAC 1 cut(s) 872
TseI GCWGC 5 cut(s) 254, 560, 650, 791, 1184
Tsp45I GTSAC 1 cut(s) 872
TspDTI ATGAA 3 cut(s) 14, 1076, 1119
TspGWI ACGGA 1 cut(s) 54
TspRI CASTG 6 cut(s) 58, 293, 718, 750, 849, 898
XapI RAATTY 4 cut(s) 623, 939, 1057, 1131
XceI RCATGY 2 cut(s) 433, 700
XhoI CTCGAG 2 cut(s) 1076, 1115
XmnI GAANNNNTTC 1 cut(s) 912
XspI CTAG 4 cut(s) 116, 407, 521, 861
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.