Prupe.8G019000_v2.0.a1

Lipolytic acyl hydrolase (LAH)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
1768900 .. 1769616
717 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G019000.1

Sequence Viewer

Length: 315 bp
ATGGAGAAAACAGGATCATCCCTTCATTCTCCCACTAACGGAAGTCTCATCACTATTCTTAGTAGTGATGGAGATGGAATGAGAGGGATAATTACAGGAGTTATACTCAAGTTCCTAGAGTCTTATTTTCAAAAGCTGGATGGTAAGCATGTAAGGCTCGCATATTATTTTCATGTGGTTACATGGACGAGCACAAGTGGCCTTGTGACTGTCATGTTCACTACCCCAGATGAAAATAATAATCCCTTGTATGTTGATGAAGATATCATCCCTTTGTATCTTGAACATTGCCCTAAAATCTTCCCCAAAACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

105

Amino Acids

11.65

Weight (kDa)

5.69

Isoelectric Point (pI)

12.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 22
AfiI CCNNNNNNNGG 1 cut(s) 38
AgsI TTSAA 2 cut(s) 131, 284
AluBI AGCT 1 cut(s) 136
AluI AGCT 1 cut(s) 136
Alw21I GWGCWC 1 cut(s) 194
Alw26I GTCTC 1 cut(s) 50
AlwI GGATC 1 cut(s) 22
AoxI GGCC 1 cut(s) 199
Bbv12I GWGCWC 1 cut(s) 194
BccI CCATC 3 cut(s) 62, 68, 134
BcoDI GTCTC 1 cut(s) 50
BfaI CTAG 1 cut(s) 116
BplI GAGNNNNNCTC 2 cut(s) 90, 122
BpuEI CTTGAG 1 cut(s) 92
Bsc4I CCNNNNNNNGG 1 cut(s) 38
Bse3DI GCAATG 1 cut(s) 286
BseGI GGATG 3 cut(s) 17, 145, 267
BseLI CCNNNNNNNGG 1 cut(s) 38
BseMI GCAATG 1 cut(s) 286
BshFI GGCC 1 cut(s) 201
BsiHKAI GWGCWC 1 cut(s) 194
BslI CCNNNNNNNGG 1 cut(s) 38
BsmAI GTCTC 1 cut(s) 50
BsnI GGCC 1 cut(s) 201
Bsp1286I GDGCHC 1 cut(s) 194
Bsp143I GATC 1 cut(s) 14
BspANI GGCC 1 cut(s) 201
BspPI GGATC 1 cut(s) 22
BsrDI GCAATG 1 cut(s) 286
BssMI GATC 1 cut(s) 14
Bst4CI ACNGT 1 cut(s) 211
BstC8I GCNNGC 1 cut(s) 159
BstDEI CTNAG 1 cut(s) 59
BstF5I GGATG 3 cut(s) 17, 145, 267
BstKTI GATC 1 cut(s) 17
BstMAI GTCTC 1 cut(s) 50
BstMBI GATC 1 cut(s) 14
BstMWI GCNNNNNNNGC 2 cut(s) 154, 198
BstNSI RCATGY 1 cut(s) 152
BsuRI GGCC 1 cut(s) 201
BtsCI GGATG 3 cut(s) 17, 145, 267
Cac8I GCNNGC 1 cut(s) 159
CviAII CATG 4 cut(s) 149, 173, 183, 214
CviJI RGCY 3 cut(s) 136, 157, 201
CviKI_1 RGCY 3 cut(s) 136, 157, 201
DdeI CTNAG 1 cut(s) 59
DpnI GATC 1 cut(s) 16
DpnII GATC 1 cut(s) 14
Eco32I GATATC 1 cut(s) 265
EcoRV GATATC 1 cut(s) 265
FaeI CATG 4 cut(s) 152, 176, 186, 217
FaiI YATR 7 cut(s) 104, 150, 163, 174, 184, 215, 252
FatI CATG 4 cut(s) 148, 172, 182, 213
FokI GGATG 3 cut(s) 4, 152, 254
FspBI CTAG 1 cut(s) 116
HaeIII GGCC 1 cut(s) 201
Hin1II CATG 4 cut(s) 152, 176, 186, 217
HinfI GANTC 1 cut(s) 119
Hpy166II GTNNAC 1 cut(s) 219
Hpy188III TCNNGA 1 cut(s) 281
Hpy8I GTNNAC 1 cut(s) 219
HpyAV CCTTC 1 cut(s) 32
HpyCH4III ACNGT 1 cut(s) 211
HpyF10VI GCNNNNNNNGC 2 cut(s) 154, 198
HpyF3I CTNAG 1 cut(s) 59
Hsp92II CATG 4 cut(s) 152, 176, 186, 217
Kzo9I GATC 1 cut(s) 14
LpnPI CCDG 3 cut(s) 81, 122, 240
MaeI CTAG 1 cut(s) 116
MaeIII GTNAC 2 cut(s) 178, 205
MalI GATC 1 cut(s) 16
MboI GATC 1 cut(s) 14
MboII GAAGA 2 cut(s) 272, 292
MhlI GDGCHC 1 cut(s) 194
MluCI AATT 1 cut(s) 90
MlyI GAGTC 1 cut(s) 128
MnlI CCTC 1 cut(s) 77
MwoI GCNNNNNNNGC 2 cut(s) 154, 198
NdeII GATC 1 cut(s) 14
NlaIII CATG 4 cut(s) 152, 176, 186, 217
NmuCI GTSAC 1 cut(s) 205
NspI RCATGY 1 cut(s) 152
PleI GAGTC 1 cut(s) 127
PpsI GAGTC 1 cut(s) 127
Sau3AI GATC 1 cut(s) 14
SchI GAGTC 1 cut(s) 128
SduI GDGCHC 1 cut(s) 194
SetI ASST 2 cut(s) 138, 314
SmlI CTYRAG 1 cut(s) 107
SmoI CTYRAG 1 cut(s) 107
Sse9I AATT 1 cut(s) 90
SspMI CTAG 1 cut(s) 116
TaaI ACNGT 1 cut(s) 211
TasI AATT 1 cut(s) 90
TseFI GTSAC 1 cut(s) 205
Tsp45I GTSAC 1 cut(s) 205
TspDTI ATGAA 4 cut(s) 14, 161, 246, 273
TspGWI ACGGA 1 cut(s) 54
XceI RCATGY 1 cut(s) 152
XspI CTAG 1 cut(s) 116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.