Prupe.7G263100_v2.0.a1

Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
21817502 .. 21821764
4263 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G263100.1

Sequence Viewer

Length: 1917 bp
ATGGCGAGAGGACCTCTCGCTTTTCAGCTATGGATCTCTGTGTGTCTTTTGCTCTTCTTTCGTGCTCGCTGCTTCTATCTCCCTGGTGTTGCCCCTCAAGATTTTCAAAATGGAGATCCATTGAATCCGAAAGTGAACAAAGTGACATCTACAAAAACTCAACTTCCTTATTCATACTATTCCCTCCCATACTGTCGTCCAGAGCATATAGTTGACAGTGCAGAGAATCTTGGGGAAGTTCTTCGTGGTGATCGTATTGAAAACTCTCCTTACGAGTTCAAAATGAGAGAACCCCAGATGTGCAATGTTGTATGTCATGTAACTCTTAATGCAAAAACTGCAAAGGAATTTAAGGAAAAGATAGATGATGAGTATCGGGTGAACATGATTCTGGATAATCTCCCTCTGGTTGTTCCTGTACCAAGGCCTGATCAGGAAAATTCCTTAGTGTATCAACATGGCTTTCATGTTGGTCTCAGAGGGCAATATGCTGGGAACAAGGATGAAAAGCATTTTATCAACAATCACTTAACATTTACAGTCAAGTATCATAAAGATCCAATGACAGAATCTGCCAGGATTGTGGGATTTGAGGTGAAACCATTCAGTGTTAAGCATGAATATGAAGGTGAGTGGAGTAAGAAGACACGATTAACAACTTGTGATCCCCATGCAAAGCGCACAGTTACCAGCTCTGAATCTCCTCAGGAGGTTGAAGATAAAAAGGAAATTATATTCACCTACGATGTTGAGTTCCAGGAGAGCGATGTGAAGTGGGCATCTCGGTGGGACACATATCTTCTGATGGCTGATGATCAAATCCACTGGTTTTCAATTGTTAATTCTTTGATGATTGTTCTTTTCCTATCGGGCATGGTGGCTATGATCATGTTGCGGACACTTTACCGGGATATTTCCAAGTACAACCAACTAGAGACCCAAGAAGAAGCCCAAGAGGAGACGGGATGGAAACTGGTTCATGGTGATGTATTCAGACCTCCATCAAACTCAGATCTACTGTGTGTGTATGTTGGGACAGGTGTGCAGTTCTTTGGGATGATTCTTGTCACCATGCTCTTTGCAGTCCTTGGATTTCTATCCCCTTCAAACCGAGGTGGGTTGATGACTGTCATGCTCCTCCTCTGGGTCTTTATGGGTCTCTTTGCTGGGTACTCTTCAGCCCGTCTCTATAAGATGTTTAAGGGAACAGAATGGAAGAAAATCACTCTCAAAACAGCTTTCATGTTTCCTGCAACTGTCTTTGCCATTTTCTTTGTCTTAAATGCTCTTATCTGGGGAGAGAAATCCTCTGGGGCAGTGCCATTTGGAACCATGTTTGCTCTGGTATTCTTGTGGTTTGGCATTTCAGTTCCACTTATATTCGTTGGTGCATATGTGGGATTTAGGAAGCCAGCAATTGAGGATCCTGTGAAAACCAACAAGATCCCTAGGCAGGTCCCGGAACAGGCATGGTACATGAATTCAGCCTTCTCTATCCTAATTGGAGGCATACTCCCATTTGGGGCCGTCTTTATTGAGCTCTTCTTCATCCTTACATCGATCTGGTTGCATCAATTCTATTACATATTTGGGTTCCTTTTCATCGTCTTCATTATCCTCATCATCACTTGTGCTGAGATCACAATTGTGCTATGCTACTTCCAGCTGTGCAGTGAAGACTACCTATGGTGGTGGAGGTCATATTTGACCTCAGGCTCCTCCGCACTCTACCTTTTTCTCTATGCTGCCTTCTACTTCTTCACTAAGCTTGACATTAAGAAGCCAGTATCTGGAGCCTTATATTTTGGGTATATGCTGATTGCTTCTTATTCTTTCTTTGTGCTGACTGGTACTATCGGTTTCTATGCATGCTTCTGGTTTACTAGGCTCATCTATTCATCAGTGAAGATCGACTGA

Protein Analysis

639

Amino Acids

73.6

Weight (kDa)

7.15

Isoelectric Point (pI)

37.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010668)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1444
AccB7I CCANNNNNTGG 1 cut(s) 1790
AciI CCGC 2 cut(s) 895, 1722
AclWI GGATC 7 cut(s) 41, 110, 551, 659, 1418, 1431, 1438
AcsI RAATTY 3 cut(s) 347, 439, 1480
AcuI CTGAAG 1 cut(s) 1161
AfaI GTAC 5 cut(s) 420, 923, 1172, 1475, 1852
AfiI CCNNNNNNNGG 5 cut(s) 1144, 1453, 1465, 1522, 1790
AgsI TTSAA 7 cut(s) 107, 124, 260, 280, 716, 834, 1107
AjnI CCWGG 3 cut(s) 82, 575, 756
AleI CACNNNNGTG 1 cut(s) 1646
AluBI AGCT 6 cut(s) 28, 693, 1238, 1540, 1666, 1768
AluI AGCT 6 cut(s) 28, 693, 1238, 1540, 1666, 1768
Alw21I GWGCWC 2 cut(s) 67, 1542
Alw26I GTCTC 5 cut(s) 479, 929, 953, 1163, 1190
AlwI GGATC 7 cut(s) 41, 110, 551, 659, 1418, 1431, 1438
AlwNI CAGNNNCTG 2 cut(s) 572, 1790
AoxI GGCC 2 cut(s) 425, 1524
ApeKI GCWGC 2 cut(s) 69, 1745
ApoI RAATTY 3 cut(s) 347, 439, 1480
Asp700I GAANNNNTTC 2 cut(s) 240, 602
AspA2I CCTAGG 1 cut(s) 1448
AspLEI GCGC 1 cut(s) 681
AspS9I GGNCC 3 cut(s) 11, 1456, 1524
AsuC2I CCSGG 2 cut(s) 908, 1460
AsuHPI GGTGA 7 cut(s) 260, 391, 607, 641, 730, 995, 1060
AvaII GGWCC 2 cut(s) 11, 1456
AvrII CCTAGG 1 cut(s) 1448
AxyI CCTNAGG 2 cut(s) 705, 1711
BamHI GGATCC 1 cut(s) 1423
BanII GRGCYC 1 cut(s) 1542
BbsI GAAGAC 3 cut(s) 650, 1600, 1683
Bbv12I GWGCWC 2 cut(s) 67, 1542
BbvI GCAGC 2 cut(s) 56, 1732
BccI CCATC 3 cut(s) 799, 960, 1009
BceAI ACGGC 1 cut(s) 1511
BcgI CGANNNNNNTGC 2 cut(s) 1549, 1583
BciT130I CCWGG 3 cut(s) 84, 577, 758
BclI TGATCA 3 cut(s) 430, 814, 885
BcnI CCSGG 2 cut(s) 908, 1460
BcoDI GTCTC 5 cut(s) 479, 929, 953, 1163, 1190
BfaI CTAG 3 cut(s) 932, 1449, 1884
BfuAI ACCTGC 1 cut(s) 1444
BglII AGATCT 1 cut(s) 1012
BisI GCNGC 2 cut(s) 70, 1746
BlnI CCTAGG 1 cut(s) 1448
BlsI GCNGC 2 cut(s) 71, 1747
Bme1390I CCNGG 5 cut(s) 84, 577, 758, 908, 1460
Bme18I GGWCC 2 cut(s) 11, 1456
BmgT120I GGNCC 3 cut(s) 11, 1456, 1524
BmiI GGNNCC 7 cut(s) 1330, 1425, 1458, 1525, 1595, 1717, 1795
BmrFI CCNGG 5 cut(s) 84, 577, 758, 908, 1460
BmsI GCATC 2 cut(s) 788, 1579
BpiI GAAGAC 3 cut(s) 650, 1600, 1683
BplI GAGNNNNNCTC 6 cut(s) 30, 32, 1292, 1324, 1497, 1529
BpmI CTGGAG 1 cut(s) 1812
BpuEI CTTGAG 1 cut(s) 81
BpuMI CCSGG 2 cut(s) 908, 1460
Bsa29I ATCGAT 1 cut(s) 1559
BsaBI GATNNNNATC 2 cut(s) 372, 1096
BsaI GGTCTC 3 cut(s) 479, 929, 1163
BsaJI CCNNGG 5 cut(s) 82, 422, 1087, 1111, 1448
Bsc4I CCNNNNNNNGG 5 cut(s) 1144, 1453, 1465, 1522, 1790
Bse1I ACTGG 4 cut(s) 830, 978, 1784, 1852
Bse21I CCTNAGG 2 cut(s) 705, 1711
Bse3DI GCAATG 1 cut(s) 310
Bse8I GATNNNNATC 2 cut(s) 372, 1096
BseBI CCWGG 3 cut(s) 84, 577, 758
BseCI ATCGAT 1 cut(s) 1559
BseDI CCNNGG 5 cut(s) 82, 422, 1087, 1111, 1448
BseGI GGATG 4 cut(s) 508, 971, 1062, 1548
BseJI GATNNNNATC 2 cut(s) 372, 1096
BseLI CCNNNNNNNGG 5 cut(s) 1144, 1453, 1465, 1522, 1790
BseMI GCAATG 1 cut(s) 310
BseMII CTCAG 5 cut(s) 490, 719, 1023, 1626, 1725
BseNI ACTGG 4 cut(s) 830, 978, 1784, 1852
BseRI GAGGAG 5 cut(s) 693, 971, 1127, 1130, 1708
BseXI GCAGC 2 cut(s) 56, 1732
BseYI CCCAGC 2 cut(s) 491, 1166
BsgI GTGCAG 3 cut(s) 240, 1064, 1690
BshFI GGCC 2 cut(s) 427, 1526
BshVI ATCGAT 1 cut(s) 1559
BsiHKAI GWGCWC 2 cut(s) 67, 1542
BsiSI CCGG 2 cut(s) 907, 1460
BslFI GGGAC 3 cut(s) 803, 1048, 1442
BslI CCNNNNNNNGG 5 cut(s) 1144, 1453, 1465, 1522, 1790
BsmAI GTCTC 5 cut(s) 479, 929, 953, 1163, 1190
BsmBI CGTCTC 2 cut(s) 953, 1190
BsmFI GGGAC 3 cut(s) 803, 1048, 1442
BsnI GGCC 2 cut(s) 427, 1526
Bso31I GGTCTC 3 cut(s) 479, 929, 1163
Bsp1286I GDGCHC 2 cut(s) 67, 1542
BspACI CCGC 2 cut(s) 895, 1722
BspANI GGCC 2 cut(s) 427, 1526
BspCNI CTCAG 5 cut(s) 489, 718, 1022, 1627, 1724
BspDI ATCGAT 1 cut(s) 1559
BspLI GGNNCC 7 cut(s) 1330, 1425, 1458, 1525, 1595, 1717, 1795
BspMI ACCTGC 1 cut(s) 1444
BspPI GGATC 7 cut(s) 41, 110, 551, 659, 1418, 1431, 1438
BspQI GCTCTTC 2 cut(s) 59, 1547
BspTNI GGTCTC 3 cut(s) 479, 929, 1163
BsrDI GCAATG 1 cut(s) 310
BsrI ACTGG 4 cut(s) 830, 978, 1784, 1852
BssECI CCNNGG 5 cut(s) 82, 422, 1087, 1111, 1448
BssT1I CCWWGG 3 cut(s) 422, 1087, 1448
Bst2UI CCWGG 3 cut(s) 84, 577, 758
Bst4CI ACNGT 7 cut(s) 194, 218, 541, 685, 1020, 1129, 1258
Bst6I CTCTTC 3 cut(s) 59, 1180, 1547
BstAPI GCANNNNNTGC 1 cut(s) 338
BstC8I GCNNGC 3 cut(s) 67, 1413, 1870
BstDEI CTNAG 7 cut(s) 445, 476, 705, 1009, 1635, 1711, 1764
BstF5I GGATG 4 cut(s) 508, 971, 1062, 1548
BstHHI GCGC 1 cut(s) 681
BstMAI GTCTC 5 cut(s) 479, 929, 953, 1163, 1190
BstMWI GCNNNNNNNGC 1 cut(s) 338
BstNI CCWGG 3 cut(s) 84, 577, 758
BstNSI RCATGY 1 cut(s) 1872
BstSCI CCNGG 5 cut(s) 82, 575, 756, 906, 1458
BstV1I GCAGC 2 cut(s) 56, 1732
BstV2I GAAGAC 3 cut(s) 650, 1600, 1683
BstX2I RGATCY 6 cut(s) 33, 115, 556, 1012, 1423, 1443
BstXI CCANNNNNNTGG 1 cut(s) 583
BstYI RGATCY 6 cut(s) 33, 115, 556, 1012, 1423, 1443
Bsu15I ATCGAT 1 cut(s) 1559
Bsu36I CCTNAGG 2 cut(s) 705, 1711
BsuRI GGCC 2 cut(s) 427, 1526
BsuTUI ATCGAT 1 cut(s) 1559
BtgZI GCGATG 1 cut(s) 780
BtsCI GGATG 4 cut(s) 508, 971, 1062, 1548
BtsI GCAGTG 2 cut(s) 1323, 1678
BtsIMutI CAGTG 6 cut(s) 223, 613, 823, 1323, 1678, 1908
BveI ACCTGC 1 cut(s) 1444
Cac8I GCNNGC 3 cut(s) 67, 1413, 1870
CaiI CAGNNNCTG 2 cut(s) 572, 1790
CfoI GCGC 1 cut(s) 681
Cfr13I GGNCC 3 cut(s) 11, 1456, 1524
ClaI ATCGAT 1 cut(s) 1559
Csp6I GTAC 5 cut(s) 419, 922, 1171, 1474, 1851
CviQI GTAC 5 cut(s) 419, 922, 1171, 1474, 1851
DdeI CTNAG 7 cut(s) 445, 476, 705, 1009, 1635, 1711, 1764
Eam1104I CTCTTC 3 cut(s) 59, 1180, 1547
EarI CTCTTC 3 cut(s) 59, 1180, 1547
Ecl136II GAGCTC 1 cut(s) 1540
Eco130I CCWWGG 3 cut(s) 422, 1087, 1448
Eco147I AGGCCT 1 cut(s) 427
Eco24I GRGCYC 1 cut(s) 1542
Eco31I GGTCTC 3 cut(s) 479, 929, 1163
Eco47I GGWCC 2 cut(s) 11, 1456
Eco53kI GAGCTC 1 cut(s) 1540
Eco57I CTGAAG 1 cut(s) 1161
Eco81I CCTNAGG 2 cut(s) 705, 1711
EcoICRI GAGCTC 1 cut(s) 1540
EcoO109I RGGNCCY 2 cut(s) 11, 1456
EcoRI GAATTC 1 cut(s) 1480
EcoRII CCWGG 3 cut(s) 82, 575, 756
EcoT14I CCWWGG 3 cut(s) 422, 1087, 1448
EcoT22I ATGCAT 1 cut(s) 1870
EcoT38I GRGCYC 1 cut(s) 1542
ErhI CCWWGG 3 cut(s) 422, 1087, 1448
Esp3I CGTCTC 2 cut(s) 953, 1190
FaqI GGGAC 3 cut(s) 803, 1048, 1442
FauNDI CATATG 1 cut(s) 1393
FbaI TGATCA 3 cut(s) 430, 814, 885
Fnu4HI GCNGC 2 cut(s) 70, 1746
FokI GGATG 4 cut(s) 515, 978, 1069, 1535
FriOI GRGCYC 1 cut(s) 1542
Fsp4HI GCNGC 2 cut(s) 70, 1746
FspBI CTAG 3 cut(s) 932, 1449, 1884
GlaI GCGC 1 cut(s) 680
GluI GCNGC 2 cut(s) 70, 1746
GsaI CCCAGC 2 cut(s) 495, 1170
GsuI CTGGAG 1 cut(s) 1812
HaeIII GGCC 2 cut(s) 427, 1526
HapII CCGG 2 cut(s) 907, 1460
HhaI GCGC 1 cut(s) 681
Hin6I GCGC 1 cut(s) 679
HinP1I GCGC 1 cut(s) 679
HincII GTYRAC 1 cut(s) 214
HindII GTYRAC 1 cut(s) 214
HindIII AAGCTT 1 cut(s) 1766
HinfI GANTC 6 cut(s) 124, 226, 388, 569, 698, 1060
HpaII CCGG 2 cut(s) 907, 1460
HphI GGTGA 7 cut(s) 260, 391, 607, 641, 730, 995, 1060
Hpy166II GTNNAC 4 cut(s) 136, 214, 382, 1881
Hpy188I TCNGA 6 cut(s) 129, 479, 697, 804, 995, 1012
Hpy188III TCNNGA 6 cut(s) 98, 200, 392, 434, 707, 1791
Hpy8I GTNNAC 4 cut(s) 136, 214, 382, 1881
HpyAV CCTTC 4 cut(s) 620, 1113, 1498, 1759
HpyCH4III ACNGT 7 cut(s) 194, 218, 541, 685, 1020, 1129, 1258
HpyF10VI GCNNNNNNNGC 1 cut(s) 338
HpyF3I CTNAG 7 cut(s) 445, 476, 705, 1009, 1635, 1711, 1764
HspAI GCGC 1 cut(s) 679
Ksp22I TGATCA 3 cut(s) 430, 814, 885
LguI GCTCTTC 2 cut(s) 59, 1547
LmnI GCTCC 3 cut(s) 1140, 1721, 1793
Lsp1109I GCAGC 2 cut(s) 56, 1732
LweI GCATC 2 cut(s) 788, 1579
MaeI CTAG 3 cut(s) 932, 1449, 1884
MaeIII GTNAC 4 cut(s) 142, 319, 685, 1066
MfeI CAATTG 3 cut(s) 834, 1416, 1644
MflI RGATCY 6 cut(s) 33, 115, 556, 1012, 1423, 1443
MhlI GDGCHC 2 cut(s) 67, 1542
Mph1103I ATGCAT 1 cut(s) 1870
MroXI GAANNNNTTC 2 cut(s) 240, 602
MseI TTAA 9 cut(s) 327, 351, 530, 612, 653, 840, 1200, 1280, 1776
MslI CAYNNNNRTG 4 cut(s) 621, 784, 984, 1646
MspA1I CMGCKG 1 cut(s) 1666
MspI CCGG 2 cut(s) 907, 1460
MspR9I CCNGG 5 cut(s) 84, 577, 758, 908, 1460
MunI CAATTG 3 cut(s) 834, 1416, 1644
MvaI CCWGG 3 cut(s) 84, 577, 758
MwoI GCNNNNNNNGC 1 cut(s) 338
NciI CCSGG 2 cut(s) 908, 1460
NdeI CATATG 1 cut(s) 1393
NlaIV GGNNCC 7 cut(s) 1330, 1425, 1458, 1525, 1595, 1717, 1795
NmuCI GTSAC 2 cut(s) 142, 1066
NsiI ATGCAT 1 cut(s) 1870
NspI RCATGY 1 cut(s) 1872
OliI CACNNNNGTG 1 cut(s) 1646
PaeI GCATGC 1 cut(s) 1872
PceI AGGCCT 1 cut(s) 427
PciSI GCTCTTC 2 cut(s) 59, 1547
PcsI WCGNNNNNNNCGW 1 cut(s) 250
PdmI GAANNNNTTC 2 cut(s) 240, 602
PfeI GAWTC 6 cut(s) 124, 226, 388, 569, 698, 1060
PflMI CCANNNNNTGG 1 cut(s) 1790
PfoI TCCNGGA 2 cut(s) 756, 1458
PkrI GCNGC 2 cut(s) 71, 1747
PpuMI RGGWCCY 2 cut(s) 11, 1456
Psp124BI GAGCTC 1 cut(s) 1542
Psp5II RGGWCCY 2 cut(s) 11, 1456
Psp6I CCWGG 3 cut(s) 82, 575, 756
PspFI CCCAGC 2 cut(s) 491, 1166
PspGI CCWGG 3 cut(s) 82, 575, 756
PspN4I GGNNCC 7 cut(s) 1330, 1425, 1458, 1525, 1595, 1717, 1795
PspPI GGNCC 3 cut(s) 11, 1456, 1524
PspPPI RGGWCCY 2 cut(s) 11, 1456
PstNI CAGNNNCTG 2 cut(s) 572, 1790
PsuI RGATCY 6 cut(s) 33, 115, 556, 1012, 1423, 1443
PvuII CAGCTG 1 cut(s) 1666
RsaI GTAC 5 cut(s) 420, 923, 1172, 1475, 1852
RsaNI GTAC 5 cut(s) 419, 922, 1171, 1474, 1851
RseI CAYNNNNRTG 4 cut(s) 621, 784, 984, 1646
SacI GAGCTC 1 cut(s) 1542
SapI GCTCTTC 2 cut(s) 59, 1547
SaqAI TTAA 9 cut(s) 327, 351, 530, 612, 653, 840, 1200, 1280, 1776
SatI GCNGC 2 cut(s) 70, 1746
Sau96I GGNCC 3 cut(s) 11, 1456, 1524
ScrFI CCNGG 5 cut(s) 84, 577, 758, 908, 1460
SduI GDGCHC 2 cut(s) 67, 1542
SfaNI GCATC 2 cut(s) 788, 1579
SinI GGWCC 2 cut(s) 11, 1456
SmiMI CAYNNNNRTG 4 cut(s) 621, 784, 984, 1646
SmlI CTYRAG 1 cut(s) 96
SmoI CTYRAG 1 cut(s) 96
SphI GCATGC 1 cut(s) 1872
SseBI AGGCCT 1 cut(s) 427
SsiI CCGC 2 cut(s) 895, 1722
SspMI CTAG 3 cut(s) 932, 1449, 1884
SstI GAGCTC 1 cut(s) 1542
StuI AGGCCT 1 cut(s) 427
StyD4I CCNGG 5 cut(s) 82, 575, 756, 906, 1458
StyI CCWWGG 3 cut(s) 422, 1087, 1448
TaaI ACNGT 7 cut(s) 194, 218, 541, 685, 1020, 1129, 1258
TaqI TCGA 2 cut(s) 1559, 1911
TatI WGTACW 1 cut(s) 921
TfiI GAWTC 6 cut(s) 124, 226, 388, 569, 698, 1060
Tru1I TTAA 9 cut(s) 327, 351, 530, 612, 653, 840, 1200, 1280, 1776
Tru9I TTAA 9 cut(s) 327, 351, 530, 612, 653, 840, 1200, 1280, 1776
TscAI CASTG 6 cut(s) 223, 613, 830, 1323, 1678, 1908
TseFI GTSAC 2 cut(s) 142, 1066
TseI GCWGC 2 cut(s) 69, 1745
Tsp45I GTSAC 2 cut(s) 142, 1066
TspRI CASTG 6 cut(s) 223, 613, 830, 1323, 1678, 1908
Van91I CCANNNNNTGG 1 cut(s) 1790
VpaK11BI GGWCC 2 cut(s) 11, 1456
XapI RAATTY 3 cut(s) 347, 439, 1480
XceI RCATGY 1 cut(s) 1872
XcmI CCANNNNNNNNNTGG 1 cut(s) 1339
XmaJI CCTAGG 1 cut(s) 1448
XmnI GAANNNNTTC 2 cut(s) 240, 602
XspI CTAG 3 cut(s) 932, 1449, 1884
Zsp2I ATGCAT 1 cut(s) 1870
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.