Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0009828

Physical Location & Seq

Genomic Coordinates Reverse (-)

11060499 .. 11066315

Gene Structure 5817 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G076400.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 858 bp

ATGGACACTGGTTCAAGTCCAAGTTTGTTTCCGCTGCACCGATGCAAAACTATTCACCTGGTGAGGCATGGACAAGGAATCCACAATGTAGAGGGAGCTAAGAACTACAAAAAATTAATGAAACCTGAATATTTTGATGCGCATCTTACTCCACTAGGCTGGCAGCAGGTTGATAATTTGCGTAAGCATGTTCATGAATCTGGGCTTTCCAAGAGGATTGAGTTAGTCATTACATCTCCTTTGCTAAGAGCTCTGCAAACGGCTGTTGGAGTATTTGGAGGTGAGGGCTACACAGACAGAATGGATATATTGCCACTAATGGTGGCAAATGCAGGATATAGTGAGCGTCCTTCAATTTCAAGTCTTAACTGCCCGCCCATCATTGCAATAGAACTTTGTCGAGAGCATTTGGGAGTTCATCCCTGTGATAACAGAAGGAGCATCAGCGATTATCAGTTTCTATTTCCTGCGGTTGACTTTTCACTGATAGAAAGTGATGAGGATATATTGTGGAAGGCAAATGTCAGGGAGCTGAAAGAGGAAGTTGCAGCTAGGGGATTGAAATTCCTGAACTGGTTGTCAACAAGGAAAGAGAAAGAGATAGCAATTGTTACCCATGGTGGATTCTTGTTTCACACACTAAGTGCATTGCTAAATGATTGTGACCCTTTGGAGAAAAAAGAAATGTGCAAACACTTTACAAATTGTGAGCTTCGCTCCATGGTCATTGTTGACAGAAGTATGACAGGGTCTGATTCCTCAACAACTAATTATCCAGGAAAGATTCCTGATGGGCTAGATCTTCCTAGTGATGTTGCTAGTGAGAACCTTGAGAAAGAAAAGTCTAACTTAGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

His_Phos_1

Protein Analysis

286

Amino Acids

31.98

Weight (kDa)

6.18

Isoelectric Point (pI)

40.35

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009828)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64460 AT5G64460 AT5G64460 AT5G64460 AT5G64460 AT5G64460 AT5G64460 AT5G64460 AT5G64460 AT5G64460 AT5G64460
malus_domestica	MD05G1050300.v1.1 MD10G1057600.v1.1
prunus_persica	Prupe.8G076400_v2.0.a1 Prupe.8G076400_v2.0.a1 Prupe.8G076400_v2.0.a1 Prupe.8G076400_v2.0.a1 Prupe.8G076400_v2.0.a1 Prupe.8G076400_v2.0.a1 Prupe.8G076400_v2.0.a1
pyrus_communis	pycom10g04440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	141
Acc36I	ACCTGC	1 cut(s)	157
AciI	CCGC	3 cut(s)	32, 374, 470
AcsI	RAATTY	1 cut(s)	563
AdeI	CACNNNGTG	2 cut(s)	61, 644
AgsI	TTSAA	4 cut(s)	15, 354, 360, 562
AjnI	CCWGG	2 cut(s)	57, 775
AluBI	AGCT	5 cut(s)	98, 251, 532, 551, 712
AluI	AGCT	5 cut(s)	98, 251, 532, 551, 712
Alw21I	GWGCWC	1 cut(s)	253
AlwNI	CAGNNNCTG	1 cut(s)	752
ApeKI	GCWGC	3 cut(s)	34, 163, 548
ApoI	RAATTY	1 cut(s)	563
AseI	ATTAAT	1 cut(s)	116
AspLEI	GCGC	1 cut(s)	142
AsuHPI	GGTGA	3 cut(s)	47, 73, 293
BanII	GRGCYC	1 cut(s)	253
Bbv12I	GWGCWC	1 cut(s)	253
BbvI	GCAGC	3 cut(s)	21, 175, 560
BccI	CCATC	2 cut(s)	386, 785
BceAI	ACGGC	1 cut(s)	276
BciT130I	CCWGG	2 cut(s)	59, 777
BfaI	CTAG	5 cut(s)	155, 552, 797, 807, 819
BfuAI	ACCTGC	1 cut(s)	157
BglII	AGATCT	1 cut(s)	799
BisI	GCNGC	3 cut(s)	35, 164, 549
BlsI	GCNGC	3 cut(s)	36, 165, 550
Bme1390I	CCNGG	2 cut(s)	59, 777
BmrFI	CCNGG	2 cut(s)	59, 777
BmsI	GCATC	4 cut(s)	32, 127, 151, 450
BplI	GAGNNNNNCTC	2 cut(s)	701, 733
BpuEI	CTTGAG	1 cut(s)	851
BsaBI	GATNNNNATC	1 cut(s)	141
BsaJI	CCNNGG	2 cut(s)	616, 720
Bse1I	ACTGG	2 cut(s)	13, 578
Bse3DI	GCAATG	2 cut(s)	381, 647
Bse8I	GATNNNNATC	1 cut(s)	141
BseBI	CCWGG	2 cut(s)	59, 777
BseDI	CCNNGG	2 cut(s)	616, 720
BseGI	GGATG	1 cut(s)	418
BseJI	GATNNNNATC	1 cut(s)	141
BseMI	GCAATG	2 cut(s)	381, 647
BseNI	ACTGG	2 cut(s)	13, 578
BseXI	GCAGC	3 cut(s)	21, 175, 560
BsgI	GTGCAG	1 cut(s)	20
BsiHKAI	GWGCWC	1 cut(s)	253
Bsp1286I	GDGCHC	1 cut(s)	253
Bsp143I	GATC	1 cut(s)	799
Bsp19I	CCATGG	2 cut(s)	616, 720
BspACI	CCGC	3 cut(s)	32, 374, 470
BspHI	TCATGA	1 cut(s)	193
BspMI	ACCTGC	1 cut(s)	157
BsrDI	GCAATG	2 cut(s)	381, 647
BsrI	ACTGG	2 cut(s)	13, 578
BssECI	CCNNGG	2 cut(s)	616, 720
BssMI	GATC	1 cut(s)	799
BssT1I	CCWWGG	2 cut(s)	616, 720
Bst2UI	CCWGG	2 cut(s)	59, 777
BstC8I	GCNNGC	2 cut(s)	161, 374
BstDEI	CTNAG	4 cut(s)	99, 245, 641, 850
BstDSI	CCRYGG	2 cut(s)	616, 720
BstF5I	GGATG	1 cut(s)	418
BstHHI	GCGC	1 cut(s)	142
BstKTI	GATC	1 cut(s)	802
BstMBI	GATC	1 cut(s)	799
BstNI	CCWGG	2 cut(s)	59, 777
BstNSI	RCATGY	1 cut(s)	191
BstSCI	CCNGG	2 cut(s)	57, 775
BstV1I	GCAGC	3 cut(s)	21, 175, 560
BstX2I	RGATCY	1 cut(s)	799
BstXI	CCANNNNNNTGG	1 cut(s)	159
BstYI	RGATCY	1 cut(s)	799
BtgI	CCRYGG	2 cut(s)	616, 720
BtsCI	GGATG	1 cut(s)	418
BtsIMutI	CAGTG	2 cut(s)	6, 482
BveI	ACCTGC	1 cut(s)	157
Cac8I	GCNNGC	2 cut(s)	161, 374
CaiI	CAGNNNCTG	1 cut(s)	752
CciI	TCATGA	1 cut(s)	193
CfoI	GCGC	1 cut(s)	142
CseI	GACGC	1 cut(s)	335
CsiI	ACCWGGT	1 cut(s)	57
CviAII	CATG	5 cut(s)	68, 188, 194, 617, 721
DdeI	CTNAG	4 cut(s)	99, 245, 641, 850
DpnI	GATC	1 cut(s)	801
DpnII	GATC	1 cut(s)	799
DraIII	CACNNNGTG	2 cut(s)	61, 644
Ecl136II	GAGCTC	1 cut(s)	251
Eco130I	CCWWGG	2 cut(s)	616, 720
Eco24I	GRGCYC	1 cut(s)	253
Eco53kI	GAGCTC	1 cut(s)	251
EcoICRI	GAGCTC	1 cut(s)	251
EcoRII	CCWGG	2 cut(s)	57, 775
EcoT14I	CCWWGG	2 cut(s)	616, 720
EcoT38I	GRGCYC	1 cut(s)	253
ErhI	CCWWGG	2 cut(s)	616, 720
FaeI	CATG	5 cut(s)	71, 191, 197, 620, 724
FaiI	YATR	9 cut(s)	69, 189, 195, 308, 339, 506, 618, 722, 743
FalI	AAGNNNNNCTT	1 cut(s)	833
FatI	CATG	5 cut(s)	67, 187, 193, 616, 720
FauI	CCCGC	1 cut(s)	381
Fnu4HI	GCNGC	3 cut(s)	35, 164, 549
FokI	GGATG	1 cut(s)	405
FriOI	GRGCYC	1 cut(s)	253
Fsp4HI	GCNGC	3 cut(s)	35, 164, 549
FspAI	RTGCGCAY	1 cut(s)	141
FspBI	CTAG	5 cut(s)	155, 552, 797, 807, 819
FspI	TGCGCA	1 cut(s)	141
GlaI	GCGC	1 cut(s)	141
GluI	GCNGC	3 cut(s)	35, 164, 549
HgaI	GACGC	1 cut(s)	335
HhaI	GCGC	1 cut(s)	142
Hin1II	CATG	5 cut(s)	71, 191, 197, 620, 724
Hin6I	GCGC	1 cut(s)	140
HinP1I	GCGC	1 cut(s)	140
HincII	GTYRAC	3 cut(s)	475, 582, 733
HindII	GTYRAC	3 cut(s)	475, 582, 733
HinfI	GANTC	5 cut(s)	78, 197, 624, 755, 784
HphI	GGTGA	3 cut(s)	47, 73, 293
Hpy166II	GTNNAC	3 cut(s)	475, 582, 733
Hpy188I	TCNGA	1 cut(s)	754
Hpy188III	TCNNGA	4 cut(s)	194, 401, 568, 788
Hpy8I	GTNNAC	3 cut(s)	475, 582, 733
HpyAV	CCTTC	3 cut(s)	360, 429, 508
HpyCH4V	TGCA	8 cut(s)	37, 45, 256, 332, 386, 548, 647, 690
HpyF3I	CTNAG	4 cut(s)	99, 245, 641, 850
Hsp92II	CATG	5 cut(s)	71, 191, 197, 620, 724
HspAI	GCGC	1 cut(s)	140
Kzo9I	GATC	1 cut(s)	799
LmnI	GCTCC	4 cut(s)	95, 438, 529, 722
Lsp1109I	GCAGC	3 cut(s)	21, 175, 560
LweI	GCATC	4 cut(s)	32, 127, 151, 450
MabI	ACCWGGT	1 cut(s)	57
MaeI	CTAG	5 cut(s)	155, 552, 797, 807, 819
MaeIII	GTNAC	2 cut(s)	610, 662
MalI	GATC	1 cut(s)	801
MboI	GATC	1 cut(s)	799
MboII	GAAGA	1 cut(s)	794
MfeI	CAATTG	1 cut(s)	606
MflI	RGATCY	1 cut(s)	799
MhlI	GDGCHC	1 cut(s)	253
MluCI	AATT	7 cut(s)	113, 175, 354, 563, 606, 703, 769
MmeI	TCCRAC	1 cut(s)	247
MnlI	CCTC	8 cut(s)	57, 85, 207, 272, 277, 493, 532, 769
MseI	TTAA	3 cut(s)	116, 366, 856
MslI	CAYNNNNRTG	2 cut(s)	192, 423
MspA1I	CMGCKG	1 cut(s)	34
MspR9I	CCNGG	2 cut(s)	59, 777
MunI	CAATTG	1 cut(s)	606
MvaI	CCWGG	2 cut(s)	59, 777
NcoI	CCATGG	2 cut(s)	616, 720
NdeII	GATC	1 cut(s)	799
NlaIII	CATG	5 cut(s)	71, 191, 197, 620, 724
NmuCI	GTSAC	1 cut(s)	662
NsbI	TGCGCA	1 cut(s)	141
NspI	RCATGY	1 cut(s)	191
PagI	TCATGA	1 cut(s)	193
PfeI	GAWTC	5 cut(s)	78, 197, 624, 755, 784
PflFI	GACNNNGTC	1 cut(s)	748
PfoI	TCCNGGA	1 cut(s)	775
PkrI	GCNGC	3 cut(s)	36, 165, 550
PshBI	ATTAAT	1 cut(s)	116
Psp124BI	GAGCTC	1 cut(s)	253
Psp6I	CCWGG	2 cut(s)	57, 775
PspGI	CCWGG	2 cut(s)	57, 775
PstNI	CAGNNNCTG	1 cut(s)	752
PsuI	RGATCY	1 cut(s)	799
PsyI	GACNNNGTC	1 cut(s)	748
RseI	CAYNNNNRTG	2 cut(s)	192, 423
SacI	GAGCTC	1 cut(s)	253
SaqAI	TTAA	3 cut(s)	116, 366, 856
SatI	GCNGC	3 cut(s)	35, 164, 549
Sau3AI	GATC	1 cut(s)	799
ScrFI	CCNGG	2 cut(s)	59, 777
SduI	GDGCHC	1 cut(s)	253
SexAI	ACCWGGT	1 cut(s)	57
SfaNI	GCATC	4 cut(s)	32, 127, 151, 450
SmiMI	CAYNNNNRTG	2 cut(s)	192, 423
SmlI	CTYRAG	1 cut(s)	830
SmoI	CTYRAG	1 cut(s)	830
Sse9I	AATT	7 cut(s)	113, 175, 354, 563, 606, 703, 769
SsiI	CCGC	3 cut(s)	32, 374, 470
SspI	AATATT	1 cut(s)	131
SspMI	CTAG	5 cut(s)	155, 552, 797, 807, 819
SstI	GAGCTC	1 cut(s)	253
StyD4I	CCNGG	2 cut(s)	57, 775
StyI	CCWWGG	2 cut(s)	616, 720
TaqI	TCGA	1 cut(s)	400
TasI	AATT	7 cut(s)	113, 175, 354, 563, 606, 703, 769
TfiI	GAWTC	5 cut(s)	78, 197, 624, 755, 784
Tru1I	TTAA	3 cut(s)	116, 366, 856
Tru9I	TTAA	3 cut(s)	116, 366, 856
TscAI	CASTG	2 cut(s)	13, 489
TseFI	GTSAC	1 cut(s)	662
TseI	GCWGC	3 cut(s)	34, 163, 548
Tsp45I	GTSAC	1 cut(s)	662
TspDTI	ATGAA	4 cut(s)	134, 182, 210, 407
TspRI	CASTG	2 cut(s)	13, 489
Tth111I	GACNNNGTC	1 cut(s)	748
VspI	ATTAAT	1 cut(s)	116
XapI	RAATTY	1 cut(s)	563
XceI	RCATGY	1 cut(s)	191
XspI	CTAG	5 cut(s)	155, 552, 797, 807, 819

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.