Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0014587

Physical Location & Seq

Genomic Coordinates Reverse (-)

19816130 .. 19818295

Gene Structure 2166 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G216200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 900 bp

ATGGGTTTGCCCACCAAGCTATCTCCTTTCATGTGCTCTGCTCTGCTTTTCTACACAGTCTTTGCTTCCTTTCCCTTTGCCATCACTTCTGCTGATTTCACAAACTTGGTTTACAAGGGCTGTGCAAACCAAAAGTTCCAGGACCCAAGTTCTTCACAAACCCTCAAATCCCTCTTTGATTCTCTGGTCTTACAATCTTCACAAAAGACTTTCTTTTCAACCACTTCTGGTGAAGGCCAAAATGCCATCTCAGGCCTGTATCAATGCAGGGGAGACCTCACCACCTCCCAGTGTAACAGCTGTGTGAAAAAGATCCCAACTTTGGTCAGCAAACTCTGTGGAGAAGTCATAGCAGCTAGAGTTCAGCTCGGTGGGTGTTACTTGCGCTATGAGATTGCTGGGTTCAAGCAGGTTTCTGGAACAGAGTTTTTGTTCAAGATCTGTAAGTCAGATCAGGCAAGTGGAAGCAGTGGGTTTGAGGAGAAGAGAGACTCGGCCTTTGCTATGGTGGAGAATGGGGTGAAGAATGGAACTGGTGGGTTGTTTTATGCTGGGACCTATCAGTCTGTGTATGTTTTGGGGCAGTGTGAAGGTGATTTGGGCACTGGGGATTGTGGGGATTGTGTGAAAAGTGCTGATCAGAAGGCTAAGACTGAGTGTGGTGATTCAATTTCTGGGCAGATATATCTTCAGAAGTGCTATATTAACTACAGCTATTACCCCAATGGTGTTCCAAGCATAACTTCATCATCAGGGACTGTAGGGTCTAGACATCATACACAAAGGACAGTGGCGATTGCAGTGGGAGGATTGGCAGCTTTTGGGTTTTTAGTGGTTTGCTTGATGTTTGTTCGGCAGCTCATGAAAAAACATGGTGGTAAACATGGAGATTACTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005618 GO:0005623 GO:0005911 GO:0006810 GO:0008150 GO:0009505 GO:0009506 GO:0009987 GO:0010496 GO:0010497 GO:0016020 GO:0016032 GO:0030054 GO:0030312 GO:0040011 GO:0044000 GO:0044403 GO:0044419 GO:0044464 GO:0044766 GO:0046739 GO:0046794 GO:0051179 GO:0051234 GO:0051701 GO:0051704 GO:0051814 GO:0052126 GO:0052192 GO:0055044 GO:0071944 GO:1902579

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Stress-antifung

Protein Analysis

300

Amino Acids

32.14

Weight (kDa)

8.57

Isoelectric Point (pI)

33.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014587)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G43980
fragaria_vesca	FvH4_2g20590 FvH4_2g20590
malus_domestica	MD00G1060400.v1.1
prunus_persica	Prupe.8G216200_v2.0.a1
pyrus_communis	pycom10g15290
rosa_chinensis	RchiOBHm_Chr6g0286761
rosa_laevigata	RLG00000012544
rosa_multiflora	Rmu_sc0007546.1_g000011 Rmu_sc0036247.1_g000002
rosa_roxburghii	Rroxscaffold_7G00182030
rosa_rugosa	Rorug06G0182800
rosa_samantha	Rh6AG295300 Rh6BG299300 Rh6CG299200 Rh6DG291100
rosa_wichuraiana	Rw6G025430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	562, 763
Acc36I	ACCTGC	1 cut(s)	400
AclWI	GGATC	1 cut(s)	307
AcuI	CTGAAG	1 cut(s)	674
AfiI	CCNNNNNNNGG	1 cut(s)	322
AgsI	TTSAA	4 cut(s)	219, 406, 436, 669
AjnI	CCWGG	1 cut(s)	138
AjuI	GAANNNNNNNTTGG	2 cut(s)	727, 759
AluBI	AGCT	7 cut(s)	19, 300, 356, 367, 714, 818, 859
AluI	AGCT	7 cut(s)	19, 300, 356, 367, 714, 818, 859
Alw21I	GWGCWC	1 cut(s)	38
Alw26I	GTCTC	2 cut(s)	267, 483
AlwI	GGATC	1 cut(s)	307
AlwNI	CAGNNNCTG	1 cut(s)	758
AoxI	GGCC	3 cut(s)	235, 253, 495
ApeKI	GCWGC	3 cut(s)	353, 815, 856
ArsI	GACNNNNNNTTYG	2 cut(s)	482, 514
AspLEI	GCGC	1 cut(s)	387
AspS9I	GGNCC	2 cut(s)	142, 555
AsuHPI	GGTGA	5 cut(s)	242, 271, 532, 605, 674
AvaII	GGWCC	2 cut(s)	142, 555
BaeGI	GKGCMC	1 cut(s)	605
Bbv12I	GWGCWC	1 cut(s)	38
BbvI	GCAGC	3 cut(s)	365, 827, 868
BccI	CCATC	2 cut(s)	89, 254
BciT130I	CCWGG	1 cut(s)	140
BclI	TGATCA	1 cut(s)	637
BcoDI	GTCTC	2 cut(s)	267, 483
BfaI	CTAG	2 cut(s)	357, 768
BfmI	CTRYAG	2 cut(s)	709, 759
BfuAI	ACCTGC	1 cut(s)	400
BglII	AGATCT	1 cut(s)	438
BisI	GCNGC	3 cut(s)	354, 816, 857
BlsI	GCNGC	3 cut(s)	355, 817, 858
Bme1390I	CCNGG	1 cut(s)	140
Bme18I	GGWCC	2 cut(s)	142, 555
BmgT120I	GGNCC	2 cut(s)	142, 555
BmiI	GGNNCC	2 cut(s)	144, 556
BmrFI	CCNGG	1 cut(s)	140
BmrI	ACTGGG	2 cut(s)	283, 615
BmuI	ACTGGG	2 cut(s)	283, 615
BplI	GAGNNNNNCTC	2 cut(s)	351, 383
BsaI	GGTCTC	1 cut(s)	267
Bsc4I	CCNNNNNNNGG	1 cut(s)	322
Bse1I	ACTGG	3 cut(s)	289, 538, 610
BseBI	CCWGG	1 cut(s)	140
BseLI	CCNNNNNNNGG	1 cut(s)	322
BseMII	CTCAG	2 cut(s)	264, 645
BseNI	ACTGG	3 cut(s)	289, 538, 610
BseRI	GAGGAG	1 cut(s)	494
BseSI	GKGCMC	1 cut(s)	605
BseXI	GCAGC	3 cut(s)	365, 827, 868
BseYI	CCCAGC	2 cut(s)	398, 551
BshFI	GGCC	3 cut(s)	237, 255, 497
BsiHKAI	GWGCWC	1 cut(s)	38
BslFI	GGGAC	2 cut(s)	568, 769
BslI	CCNNNNNNNGG	1 cut(s)	322
BsmAI	GTCTC	2 cut(s)	267, 483
BsmFI	GGGAC	2 cut(s)	568, 769
BsnI	GGCC	3 cut(s)	237, 255, 497
Bso31I	GGTCTC	1 cut(s)	267
Bsp1286I	GDGCHC	2 cut(s)	38, 605
Bsp143I	GATC	4 cut(s)	312, 438, 451, 637
BspANI	GGCC	3 cut(s)	237, 255, 497
BspCNI	CTCAG	2 cut(s)	263, 646
BspHI	TCATGA	1 cut(s)	861
BspLI	GGNNCC	2 cut(s)	144, 556
BspMI	ACCTGC	1 cut(s)	400
BspPI	GGATC	1 cut(s)	307
BspTNI	GGTCTC	1 cut(s)	267
BsrI	ACTGG	3 cut(s)	289, 538, 610
BssMI	GATC	4 cut(s)	312, 438, 451, 637
Bst2UI	CCWGG	1 cut(s)	140
Bst4CI	ACNGT	3 cut(s)	58, 760, 790
Bst6I	CTCTTC	1 cut(s)	479
BstDEI	CTNAG	3 cut(s)	250, 648, 654
BstHHI	GCGC	1 cut(s)	387
BstKTI	GATC	4 cut(s)	315, 441, 454, 640
BstMAI	GTCTC	2 cut(s)	267, 483
BstMBI	GATC	4 cut(s)	312, 438, 451, 637
BstMWI	GCNNNNNNNGC	1 cut(s)	16
BstNI	CCWGG	1 cut(s)	140
BstSCI	CCNGG	1 cut(s)	138
BstSFI	CTRYAG	2 cut(s)	709, 759
BstSLI	GKGCMC	1 cut(s)	605
BstV1I	GCAGC	3 cut(s)	365, 827, 868
BstX2I	RGATCY	2 cut(s)	312, 438
BstYI	RGATCY	2 cut(s)	312, 438
BsuRI	GGCC	3 cut(s)	237, 255, 497
BtsI	GCAGTG	3 cut(s)	475, 590, 807
BtsIMutI	CAGTG	6 cut(s)	296, 475, 590, 603, 795, 807
BveI	ACCTGC	1 cut(s)	400
CaiI	CAGNNNCTG	1 cut(s)	758
CciI	TCATGA	1 cut(s)	861
CfoI	GCGC	1 cut(s)	387
Cfr13I	GGNCC	2 cut(s)	142, 555
CspCI	CAANNNNNGTGG	2 cut(s)	319, 354
CviAII	CATG	4 cut(s)	31, 862, 872, 884
DdeI	CTNAG	3 cut(s)	250, 648, 654
DpnI	GATC	4 cut(s)	314, 440, 453, 639
DpnII	GATC	4 cut(s)	312, 438, 451, 637
DrdI	GACNNNNNNGTC	2 cut(s)	562, 763
DseDI	GACNNNNNNGTC	2 cut(s)	562, 763
Eam1104I	CTCTTC	1 cut(s)	479
EarI	CTCTTC	1 cut(s)	479
Eco147I	AGGCCT	1 cut(s)	255
Eco31I	GGTCTC	1 cut(s)	267
Eco47I	GGWCC	2 cut(s)	142, 555
Eco57I	CTGAAG	1 cut(s)	674
EcoO109I	RGGNCCY	2 cut(s)	142, 555
EcoRII	CCWGG	1 cut(s)	138
FaeI	CATG	4 cut(s)	34, 865, 875, 887
FalI	AAGNNNNNCTT	4 cut(s)	197, 229, 727, 759
FaqI	GGGAC	2 cut(s)	568, 769
FatI	CATG	4 cut(s)	30, 861, 871, 883
FbaI	TGATCA	1 cut(s)	637
Fnu4HI	GCNGC	3 cut(s)	354, 816, 857
Fsp4HI	GCNGC	3 cut(s)	354, 816, 857
FspBI	CTAG	2 cut(s)	357, 768
GlaI	GCGC	1 cut(s)	386
GluI	GCNGC	3 cut(s)	354, 816, 857
GsaI	CCCAGC	2 cut(s)	402, 555
HaeIII	GGCC	3 cut(s)	237, 255, 497
HhaI	GCGC	1 cut(s)	387
Hin1II	CATG	4 cut(s)	34, 865, 875, 887
Hin6I	GCGC	1 cut(s)	385
HinP1I	GCGC	1 cut(s)	385
HinfI	GANTC	3 cut(s)	179, 491, 665
HphI	GGTGA	5 cut(s)	242, 271, 532, 605, 674
Hpy166II	GTNNAC	2 cut(s)	112, 881
Hpy188I	TCNGA	3 cut(s)	451, 642, 693
Hpy188III	TCNNGA	4 cut(s)	417, 436, 768, 862
Hpy8I	GTNNAC	2 cut(s)	112, 881
HpyAV	CCTTC	3 cut(s)	227, 584, 637
HpyCH4III	ACNGT	3 cut(s)	58, 760, 790
HpyCH4V	TGCA	3 cut(s)	125, 267, 800
HpyF10VI	GCNNNNNNNGC	1 cut(s)	16
HpyF3I	CTNAG	3 cut(s)	250, 648, 654
Hsp92II	CATG	4 cut(s)	34, 865, 875, 887
HspAI	GCGC	1 cut(s)	385
Ksp22I	TGATCA	1 cut(s)	637
Kzo9I	GATC	4 cut(s)	312, 438, 451, 637
Lsp1109I	GCAGC	3 cut(s)	365, 827, 868
MaeI	CTAG	2 cut(s)	357, 768
MaeIII	GTNAC	2 cut(s)	293, 377
MalI	GATC	4 cut(s)	314, 440, 453, 639
MboI	GATC	4 cut(s)	312, 438, 451, 637
MboII	GAAGA	5 cut(s)	144, 189, 496, 535, 680
MflI	RGATCY	2 cut(s)	312, 438
MhlI	GDGCHC	2 cut(s)	38, 605
MluCI	AATT	1 cut(s)	669
MlyI	GAGTC	1 cut(s)	485
MnlI	CCTC	6 cut(s)	173, 182, 287, 295, 472, 800
MseI	TTAA	1 cut(s)	705
MspA1I	CMGCKG	1 cut(s)	300
MspR9I	CCNGG	1 cut(s)	140
MvaI	CCWGG	1 cut(s)	140
MwoI	GCNNNNNNNGC	1 cut(s)	16
NdeII	GATC	4 cut(s)	312, 438, 451, 637
NlaIII	CATG	4 cut(s)	34, 865, 875, 887
NlaIV	GGNNCC	2 cut(s)	144, 556
NmeAIII	GCCGAG	1 cut(s)	473
PagI	TCATGA	1 cut(s)	861
PceI	AGGCCT	1 cut(s)	255
PfeI	GAWTC	2 cut(s)	179, 665
PfoI	TCCNGGA	1 cut(s)	138
PkrI	GCNGC	3 cut(s)	355, 817, 858
PleI	GAGTC	1 cut(s)	485
PpsI	GAGTC	1 cut(s)	485
PpuMI	RGGWCCY	2 cut(s)	142, 555
Psp5II	RGGWCCY	2 cut(s)	142, 555
Psp6I	CCWGG	1 cut(s)	138
PspFI	CCCAGC	2 cut(s)	398, 551
PspGI	CCWGG	1 cut(s)	138
PspN4I	GGNNCC	2 cut(s)	144, 556
PspPI	GGNCC	2 cut(s)	142, 555
PspPPI	RGGWCCY	2 cut(s)	142, 555
PstNI	CAGNNNCTG	1 cut(s)	758
PsuI	RGATCY	2 cut(s)	312, 438
PvuII	CAGCTG	1 cut(s)	300
SaqAI	TTAA	1 cut(s)	705
SatI	GCNGC	3 cut(s)	354, 816, 857
Sau3AI	GATC	4 cut(s)	312, 438, 451, 637
Sau96I	GGNCC	2 cut(s)	142, 555
SchI	GAGTC	1 cut(s)	485
ScrFI	CCNGG	1 cut(s)	140
SduI	GDGCHC	2 cut(s)	38, 605
SfcI	CTRYAG	2 cut(s)	709, 759
SinI	GGWCC	2 cut(s)	142, 555
Sse9I	AATT	1 cut(s)	669
SseBI	AGGCCT	1 cut(s)	255
SspMI	CTAG	2 cut(s)	357, 768
StuI	AGGCCT	1 cut(s)	255
StyD4I	CCNGG	1 cut(s)	138
TaaI	ACNGT	3 cut(s)	58, 760, 790
TasI	AATT	1 cut(s)	669
TfiI	GAWTC	2 cut(s)	179, 665
Tru1I	TTAA	1 cut(s)	705
Tru9I	TTAA	1 cut(s)	705
TscAI	CASTG	6 cut(s)	296, 475, 590, 610, 795, 807
TseI	GCWGC	3 cut(s)	353, 815, 856
TspDTI	ATGAA	3 cut(s)	19, 735, 878
TspRI	CASTG	6 cut(s)	296, 475, 590, 610, 795, 807
VpaK11BI	GGWCC	2 cut(s)	142, 555
XbaI	TCTAGA	1 cut(s)	767
XspI	CTAG	2 cut(s)	357, 768

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.