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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD17G1108900.v1.1 |
| pyrus_communis | pycom01g03490 pycom02g19090 pycom02g19120 pycom13g18600 pycom17g16210 pycom17g16270 pycom17g17880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 312, 647, 1217 |
| AbsI | CCTCGAGG | 1 cut(s) | 1410 |
| AccI | GTMKAC | 1 cut(s) | 769 |
| AccII | CGCG | 2 cut(s) | 1388, 1390 |
| AciI | CCGC | 4 cut(s) | 365, 796, 1379, 2077 |
| AclI | AACGTT | 1 cut(s) | 399 |
| AclWI | GGATC | 3 cut(s) | 890, 1956, 2106 |
| AcoI | YGGCCR | 2 cut(s) | 1251, 1666 |
| AcuI | CTGAAG | 2 cut(s) | 188, 738 |
| AfaI | GTAC | 3 cut(s) | 291, 941, 1820 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1238, 1260, 1345, 1822 |
| AflIII | ACRYGT | 1 cut(s) | 520 |
| AjnI | CCWGG | 3 cut(s) | 80, 1399, 1821 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 796, 828 |
| AluBI | AGCT | 4 cut(s) | 716, 980, 1298, 1606 |
| AluI | AGCT | 4 cut(s) | 716, 980, 1298, 1606 |
| Alw21I | GWGCWC | 3 cut(s) | 531, 833, 1558 |
| Alw26I | GTCTC | 4 cut(s) | 61, 108, 1060, 1585 |
| Alw44I | GTGCAC | 3 cut(s) | 527, 829, 1554 |
| AlwI | GGATC | 3 cut(s) | 890, 1956, 2106 |
| Ama87I | CYCGRG | 4 cut(s) | 839, 1113, 1410, 1738 |
| AoxI | GGCC | 3 cut(s) | 1117, 1251, 1666 |
| ApaLI | GTGCAC | 3 cut(s) | 527, 829, 1554 |
| ApeKI | GCWGC | 2 cut(s) | 977, 1381 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2009, 2041 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1917 |
| AspLEI | GCGC | 2 cut(s) | 196, 1390 |
| AspS9I | GGNCC | 6 cut(s) | 737, 954, 1028, 1207, 1880, 2108 |
| AsuC2I | CCSGG | 3 cut(s) | 840, 841, 2112 |
| AsuHPI | GGTGA | 3 cut(s) | 1442, 1920, 2289 |
| AsuII | TTCGAA | 1 cut(s) | 1911 |
| AvaI | CYCGRG | 4 cut(s) | 839, 1113, 1410, 1738 |
| AvaII | GGWCC | 6 cut(s) | 737, 954, 1028, 1207, 1880, 2108 |
| BaeGI | GKGCMC | 4 cut(s) | 531, 833, 1351, 1558 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1173, 1205 |
| Bbv12I | GWGCWC | 3 cut(s) | 531, 833, 1558 |
| BbvI | GCAGC | 2 cut(s) | 989, 1368 |
| BccI | CCATC | 2 cut(s) | 239, 259 |
| BceAI | ACGGC | 2 cut(s) | 338, 1681 |
| BciT130I | CCWGG | 3 cut(s) | 82, 1401, 1823 |
| BclI | TGATCA | 5 cut(s) | 984, 1101, 1545, 1651, 1716 |
| BcnI | CCSGG | 3 cut(s) | 840, 841, 2112 |
| BcoDI | GTCTC | 4 cut(s) | 61, 108, 1060, 1585 |
| BfaI | CTAG | 2 cut(s) | 368, 473 |
| BisI | GCNGC | 2 cut(s) | 978, 1382 |
| BlsI | GCNGC | 2 cut(s) | 979, 1383 |
| Bme1390I | CCNGG | 6 cut(s) | 82, 840, 841, 1401, 1823, 2112 |
| Bme18I | GGWCC | 6 cut(s) | 737, 954, 1028, 1207, 1880, 2108 |
| BmeT110I | CYCGRG | 4 cut(s) | 839, 1113, 1410, 1738 |
| BmgT120I | GGNCC | 6 cut(s) | 737, 954, 1028, 1207, 1880, 2108 |
| BmiI | GGNNCC | 4 cut(s) | 738, 956, 1208, 1471 |
| BmrFI | CCNGG | 6 cut(s) | 82, 840, 841, 1401, 1823, 2112 |
| BmsI | GCATC | 6 cut(s) | 1032, 1360, 1743, 1762, 2048, 2064 |
| Bpu14I | TTCGAA | 1 cut(s) | 1911 |
| BpuMI | CCSGG | 3 cut(s) | 840, 841, 2112 |
| BsaAI | YACGTR | 1 cut(s) | 411 |
| BsaJI | CCNNGG | 4 cut(s) | 758, 839, 1114, 2111 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1233, 1263 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1238, 1260, 1345, 1822 |
| Bse1I | ACTGG | 1 cut(s) | 675 |
| BseBI | CCWGG | 3 cut(s) | 82, 1401, 1823 |
| BseDI | CCNNGG | 4 cut(s) | 758, 839, 1114, 2111 |
| BseGI | GGATG | 5 cut(s) | 90, 270, 1047, 1269, 1375 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1238, 1260, 1345, 1822 |
| BseNI | ACTGG | 1 cut(s) | 675 |
| BseRI | GAGGAG | 1 cut(s) | 1580 |
| BseSI | GKGCMC | 4 cut(s) | 531, 833, 1351, 1558 |
| BseXI | GCAGC | 2 cut(s) | 989, 1368 |
| Bsh1236I | CGCG | 2 cut(s) | 1388, 1390 |
| BshFI | GGCC | 3 cut(s) | 1119, 1253, 1668 |
| BsiHKAI | GWGCWC | 3 cut(s) | 531, 833, 1558 |
| BsiHKCI | CYCGRG | 4 cut(s) | 839, 1113, 1410, 1738 |
| BsiSI | CCGG | 2 cut(s) | 840, 2111 |
| BslFI | GGGAC | 2 cut(s) | 18, 940 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1238, 1260, 1345, 1822 |
| BsmAI | GTCTC | 4 cut(s) | 61, 108, 1060, 1585 |
| BsmBI | CGTCTC | 1 cut(s) | 1060 |
| BsmFI | GGGAC | 2 cut(s) | 18, 940 |
| BsnI | GGCC | 3 cut(s) | 1119, 1253, 1668 |
| BsoBI | CYCGRG | 4 cut(s) | 839, 1113, 1410, 1738 |
| Bsp119I | TTCGAA | 1 cut(s) | 1911 |
| Bsp1286I | GDGCHC | 4 cut(s) | 531, 833, 1351, 1558 |
| Bsp1407I | TGTACA | 1 cut(s) | 289 |
| Bsp143I | GATC | 9 cut(s) | 882, 984, 1101, 1545, 1651, 1716, 1759, 1961, 2098 |
| BspACI | CCGC | 4 cut(s) | 365, 796, 1379, 2077 |
| BspANI | GGCC | 3 cut(s) | 1119, 1253, 1668 |
| BspFNI | CGCG | 2 cut(s) | 1388, 1390 |
| BspHI | TCATGA | 1 cut(s) | 63 |
| BspLI | GGNNCC | 4 cut(s) | 738, 956, 1208, 1471 |
| BspPI | GGATC | 3 cut(s) | 890, 1956, 2106 |
| BspT104I | TTCGAA | 1 cut(s) | 1911 |
| BsrGI | TGTACA | 1 cut(s) | 289 |
| BsrI | ACTGG | 1 cut(s) | 675 |
| BssECI | CCNNGG | 4 cut(s) | 758, 839, 1114, 2111 |
| BssMI | GATC | 9 cut(s) | 882, 984, 1101, 1545, 1651, 1716, 1759, 1961, 2098 |
| BssT1I | CCWWGG | 1 cut(s) | 758 |
| Bst2UI | CCWGG | 3 cut(s) | 82, 1401, 1823 |
| Bst4CI | ACNGT | 3 cut(s) | 580, 890, 1659 |
| BstAUI | TGTACA | 1 cut(s) | 289 |
| BstBAI | YACGTR | 1 cut(s) | 411 |
| BstBI | TTCGAA | 1 cut(s) | 1911 |
| BstC8I | GCNNGC | 5 cut(s) | 1375, 1379, 1386, 1608, 1777 |
| BstDEI | CTNAG | 4 cut(s) | 712, 1193, 2162, 2216 |
| BstF5I | GGATG | 5 cut(s) | 90, 270, 1047, 1269, 1375 |
| BstFNI | CGCG | 2 cut(s) | 1388, 1390 |
| BstHHI | GCGC | 2 cut(s) | 196, 1390 |
| BstKTI | GATC | 9 cut(s) | 885, 987, 1104, 1548, 1654, 1719, 1762, 1964, 2101 |
| BstMAI | GTCTC | 4 cut(s) | 61, 108, 1060, 1585 |
| BstMBI | GATC | 9 cut(s) | 882, 984, 1101, 1545, 1651, 1716, 1759, 1961, 2098 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1355, 1387, 1740 |
| BstNI | CCWGG | 3 cut(s) | 82, 1401, 1823 |
| BstNSI | RCATGY | 3 cut(s) | 524, 977, 1985 |
| BstSCI | CCNGG | 6 cut(s) | 80, 838, 839, 1399, 1821, 2110 |
| BstSLI | GKGCMC | 4 cut(s) | 531, 833, 1351, 1558 |
| BstUI | CGCG | 2 cut(s) | 1388, 1390 |
| BstV1I | GCAGC | 2 cut(s) | 989, 1368 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1038 |
| BsuRI | GGCC | 3 cut(s) | 1119, 1253, 1668 |
| BtsCI | GGATG | 5 cut(s) | 90, 270, 1047, 1269, 1375 |
| Cac8I | GCNNGC | 5 cut(s) | 1375, 1379, 1386, 1608, 1777 |
| CciI | TCATGA | 1 cut(s) | 63 |
| CfoI | GCGC | 2 cut(s) | 196, 1390 |
| Cfr13I | GGNCC | 6 cut(s) | 737, 954, 1028, 1207, 1880, 2108 |
| Cfr9I | CCCGGG | 1 cut(s) | 839 |
| CsiI | ACCWGGT | 1 cut(s) | 1399 |
| Csp6I | GTAC | 3 cut(s) | 290, 940, 1819 |
| CviQI | GTAC | 3 cut(s) | 290, 940, 1819 |
| DdeI | CTNAG | 4 cut(s) | 712, 1193, 2162, 2216 |
| DpnI | GATC | 9 cut(s) | 884, 986, 1103, 1547, 1653, 1718, 1761, 1963, 2100 |
| DpnII | GATC | 9 cut(s) | 882, 984, 1101, 1545, 1651, 1716, 1759, 1961, 2098 |
| DraI | TTTAAA | 3 cut(s) | 492, 555, 2155 |
| EaeI | YGGCCR | 2 cut(s) | 1251, 1666 |
| EciI | GGCGGA | 1 cut(s) | 785 |
| Eco130I | CCWWGG | 1 cut(s) | 758 |
| Eco47I | GGWCC | 6 cut(s) | 737, 954, 1028, 1207, 1880, 2108 |
| Eco57I | CTGAAG | 2 cut(s) | 188, 738 |
| Eco88I | CYCGRG | 4 cut(s) | 839, 1113, 1410, 1738 |
| EcoRI | GAATTC | 1 cut(s) | 2288 |
| EcoRII | CCWGG | 3 cut(s) | 80, 1399, 1821 |
| EcoT14I | CCWWGG | 1 cut(s) | 758 |
| ErhI | CCWWGG | 1 cut(s) | 758 |
| Esp3I | CGTCTC | 1 cut(s) | 1060 |
| FaqI | GGGAC | 2 cut(s) | 18, 940 |
| FauI | CCCGC | 2 cut(s) | 1386, 2070 |
| FauNDI | CATATG | 2 cut(s) | 1713, 2235 |
| FbaI | TGATCA | 5 cut(s) | 984, 1101, 1545, 1651, 1716 |
| FblI | GTMKAC | 1 cut(s) | 769 |
| Fnu4HI | GCNGC | 2 cut(s) | 978, 1382 |
| FokI | GGATG | 5 cut(s) | 97, 277, 1054, 1276, 1382 |
| Fsp4HI | GCNGC | 2 cut(s) | 978, 1382 |
| FspBI | CTAG | 2 cut(s) | 368, 473 |
| GlaI | GCGC | 2 cut(s) | 195, 1389 |
| GluI | GCNGC | 2 cut(s) | 978, 1382 |
| HaeIII | GGCC | 3 cut(s) | 1119, 1253, 1668 |
| HapII | CCGG | 2 cut(s) | 840, 2111 |
| HhaI | GCGC | 2 cut(s) | 196, 1390 |
| Hin6I | GCGC | 2 cut(s) | 194, 1388 |
| HinP1I | GCGC | 2 cut(s) | 194, 1388 |
| HincII | GTYRAC | 4 cut(s) | 403, 458, 997, 2022 |
| HindII | GTYRAC | 4 cut(s) | 403, 458, 997, 2022 |
| HinfI | GANTC | 5 cut(s) | 425, 1745, 1913, 1925, 2177 |
| HpaI | GTTAAC | 2 cut(s) | 403, 997 |
| HpaII | CCGG | 2 cut(s) | 840, 2111 |
| HphI | GGTGA | 3 cut(s) | 1442, 1920, 2289 |
| Hpy188I | TCNGA | 5 cut(s) | 618, 1750, 1759, 1767, 1813 |
| Hpy188III | TCNNGA | 8 cut(s) | 64, 337, 1105, 1456, 1738, 1922, 2028, 2106 |
| Hpy99I | CGWCG | 1 cut(s) | 1962 |
| HpyAV | CCTTC | 9 cut(s) | 163, 269, 525, 689, 1012, 1019, 1069, 1199, 1315 |
| HpyCH4III | ACNGT | 3 cut(s) | 580, 890, 1659 |
| HpyCH4IV | ACGT | 6 cut(s) | 399, 410, 827, 833, 1558, 2024 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1355, 1387, 1740 |
| HpyF3I | CTNAG | 4 cut(s) | 712, 1193, 2162, 2216 |
| HpySE526I | ACGT | 6 cut(s) | 399, 410, 827, 833, 1558, 2024 |
| HspAI | GCGC | 2 cut(s) | 194, 1388 |
| Ksp22I | TGATCA | 5 cut(s) | 984, 1101, 1545, 1651, 1716 |
| KspAI | GTTAAC | 2 cut(s) | 403, 997 |
| Kzo9I | GATC | 9 cut(s) | 882, 984, 1101, 1545, 1651, 1716, 1759, 1961, 2098 |
| LmnI | GCTCC | 1 cut(s) | 1475 |
| Lsp1109I | GCAGC | 2 cut(s) | 989, 1368 |
| LweI | GCATC | 6 cut(s) | 1032, 1360, 1743, 1762, 2048, 2064 |
| MabI | ACCWGGT | 1 cut(s) | 1399 |
| MaeI | CTAG | 2 cut(s) | 368, 473 |
| MaeII | ACGT | 6 cut(s) | 399, 410, 827, 833, 1558, 2024 |
| MaeIII | GTNAC | 9 cut(s) | 422, 502, 707, 781, 1180, 1334, 1448, 1802, 2238 |
| MalI | GATC | 9 cut(s) | 884, 986, 1103, 1547, 1653, 1718, 1761, 1963, 2100 |
| MboI | GATC | 9 cut(s) | 882, 984, 1101, 1545, 1651, 1716, 1759, 1961, 2098 |
| MboII | GAAGA | 5 cut(s) | 744, 1549, 1754, 1900, 1981 |
| MfeI | CAATTG | 3 cut(s) | 1009, 1476, 2266 |
| MhlI | GDGCHC | 4 cut(s) | 531, 833, 1351, 1558 |
| MlyI | GAGTC | 3 cut(s) | 419, 1919, 2171 |
| MmeI | TCCRAC | 1 cut(s) | 1773 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1917 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1036 |
| MspA1I | CMGCKG | 1 cut(s) | 1381 |
| MspI | CCGG | 2 cut(s) | 840, 2111 |
| MspR9I | CCNGG | 6 cut(s) | 82, 840, 841, 1401, 1823, 2112 |
| MunI | CAATTG | 3 cut(s) | 1009, 1476, 2266 |
| MvaI | CCWGG | 3 cut(s) | 82, 1401, 1823 |
| MvnI | CGCG | 2 cut(s) | 1388, 1390 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1355, 1387, 1740 |
| NciI | CCSGG | 3 cut(s) | 840, 841, 2112 |
| NdeI | CATATG | 2 cut(s) | 1713, 2235 |
| NdeII | GATC | 9 cut(s) | 882, 984, 1101, 1545, 1651, 1716, 1759, 1961, 2098 |
| NlaIV | GGNNCC | 4 cut(s) | 738, 956, 1208, 1471 |
| NmuCI | GTSAC | 4 cut(s) | 422, 502, 781, 1448 |
| NspI | RCATGY | 3 cut(s) | 524, 977, 1985 |
| NspV | TTCGAA | 1 cut(s) | 1911 |
| PaeR7I | CTCGAG | 2 cut(s) | 1410, 1738 |
| PagI | TCATGA | 1 cut(s) | 63 |
| PciI | ACATGT | 1 cut(s) | 520 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2021 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1917 |
| PfeI | GAWTC | 2 cut(s) | 1745, 1913 |
| PkrI | GCNGC | 2 cut(s) | 979, 1383 |
| PleI | GAGTC | 3 cut(s) | 419, 1919, 2171 |
| PpsI | GAGTC | 3 cut(s) | 419, 1919, 2171 |
| Ppu21I | YACGTR | 1 cut(s) | 411 |
| PscI | ACATGT | 1 cut(s) | 520 |
| PsiI | TTATAA | 3 cut(s) | 312, 647, 1217 |
| Psp1406I | AACGTT | 1 cut(s) | 399 |
| Psp6I | CCWGG | 3 cut(s) | 80, 1399, 1821 |
| PspGI | CCWGG | 3 cut(s) | 80, 1399, 1821 |
| PspN4I | GGNNCC | 4 cut(s) | 738, 956, 1208, 1471 |
| PspPI | GGNCC | 6 cut(s) | 737, 954, 1028, 1207, 1880, 2108 |
| PspXI | VCTCGAGB | 1 cut(s) | 1410 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2086, 2118 |
| RsaI | GTAC | 3 cut(s) | 291, 941, 1820 |
| RsaNI | GTAC | 3 cut(s) | 290, 940, 1819 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1036 |
| SatI | GCNGC | 2 cut(s) | 978, 1382 |
| Sau3AI | GATC | 9 cut(s) | 882, 984, 1101, 1545, 1651, 1716, 1759, 1961, 2098 |
| Sau96I | GGNCC | 6 cut(s) | 737, 954, 1028, 1207, 1880, 2108 |
| SchI | GAGTC | 3 cut(s) | 419, 1919, 2171 |
| ScrFI | CCNGG | 6 cut(s) | 82, 840, 841, 1401, 1823, 2112 |
| SduI | GDGCHC | 4 cut(s) | 531, 833, 1351, 1558 |
| SexAI | ACCWGGT | 1 cut(s) | 1399 |
| SfaNI | GCATC | 6 cut(s) | 1032, 1360, 1743, 1762, 2048, 2064 |
| Sfr274I | CTCGAG | 2 cut(s) | 1410, 1738 |
| SfuI | TTCGAA | 1 cut(s) | 1911 |
| SinI | GGWCC | 6 cut(s) | 737, 954, 1028, 1207, 1880, 2108 |
| SlaI | CTCGAG | 2 cut(s) | 1410, 1738 |
| SmaI | CCCGGG | 1 cut(s) | 841 |
| SmiI | ATTTAAAT | 1 cut(s) | 555 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1036 |
| SmlI | CTYRAG | 2 cut(s) | 1410, 1738 |
| SmoI | CTYRAG | 2 cut(s) | 1410, 1738 |
| SsiI | CCGC | 4 cut(s) | 365, 796, 1379, 2077 |
| SspI | AATATT | 1 cut(s) | 1724 |
| SspMI | CTAG | 2 cut(s) | 368, 473 |
| StyD4I | CCNGG | 6 cut(s) | 80, 838, 839, 1399, 1821, 2110 |
| StyI | CCWWGG | 1 cut(s) | 758 |
| SwaI | ATTTAAAT | 1 cut(s) | 555 |
| TaaI | ACNGT | 3 cut(s) | 580, 890, 1659 |
| TaiI | ACGT | 6 cut(s) | 402, 413, 830, 836, 1561, 2027 |
| TaqI | TCGA | 4 cut(s) | 1364, 1411, 1739, 1911 |
| TaqII | GACCGA | 1 cut(s) | 1242 |
| TatI | WGTACW | 1 cut(s) | 289 |
| TfiI | GAWTC | 2 cut(s) | 1745, 1913 |
| TseFI | GTSAC | 4 cut(s) | 422, 502, 781, 1448 |
| TseI | GCWGC | 2 cut(s) | 977, 1381 |
| Tsp45I | GTSAC | 4 cut(s) | 422, 502, 781, 1448 |
| TspMI | CCCGGG | 1 cut(s) | 839 |
| VneI | GTGCAC | 3 cut(s) | 527, 829, 1554 |
| VpaK11BI | GGWCC | 6 cut(s) | 737, 954, 1028, 1207, 1880, 2108 |
| XceI | RCATGY | 3 cut(s) | 524, 977, 1985 |
| XhoI | CTCGAG | 2 cut(s) | 1410, 1738 |
| XmaI | CCCGGG | 1 cut(s) | 839 |
| XmiI | GTMKAC | 1 cut(s) | 769 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1917 |
| XspI | CTAG | 2 cut(s) | 368, 473 |