No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD17G1108900.v1.1 |
| pyrus_communis | pycom01g03490 pycom02g19090 pycom02g19120 pycom13g18600 pycom17g16210 pycom17g16270 pycom17g17880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 117 |
| AccBSI | CCGCTC | 1 cut(s) | 21 |
| AciI | CCGC | 2 cut(s) | 21, 381 |
| AclWI | GGATC | 1 cut(s) | 174 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 14 |
| AgsI | TTSAA | 2 cut(s) | 251, 342 |
| AluBI | AGCT | 2 cut(s) | 84, 96 |
| AluI | AGCT | 2 cut(s) | 84, 96 |
| AlwI | GGATC | 1 cut(s) | 174 |
| Ama87I | CYCGRG | 1 cut(s) | 365 |
| AoxI | GGCC | 1 cut(s) | 37 |
| AspLEI | GCGC | 1 cut(s) | 118 |
| AspS9I | GGNCC | 2 cut(s) | 38, 378 |
| AsuC2I | CCSGG | 3 cut(s) | 180, 366, 367 |
| AsuHPI | GGTGA | 1 cut(s) | 353 |
| AvaI | CYCGRG | 1 cut(s) | 365 |
| AvaII | GGWCC | 1 cut(s) | 378 |
| BcnI | CCSGG | 3 cut(s) | 180, 366, 367 |
| BfaI | CTAG | 2 cut(s) | 81, 275 |
| Bme1390I | CCNGG | 3 cut(s) | 180, 366, 367 |
| Bme18I | GGWCC | 1 cut(s) | 378 |
| BmeT110I | CYCGRG | 1 cut(s) | 365 |
| BmgT120I | GGNCC | 2 cut(s) | 38, 378 |
| BmiI | GGNNCC | 1 cut(s) | 78 |
| BmrFI | CCNGG | 3 cut(s) | 180, 366, 367 |
| BpuMI | CCSGG | 3 cut(s) | 180, 366, 367 |
| BsaJI | CCNNGG | 3 cut(s) | 179, 364, 365 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 14 |
| BseDI | CCNNGG | 3 cut(s) | 179, 364, 365 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 14 |
| BseRI | GAGGAG | 1 cut(s) | 86 |
| BshFI | GGCC | 1 cut(s) | 39 |
| BsiHKCI | CYCGRG | 1 cut(s) | 365 |
| BsiSI | CCGG | 2 cut(s) | 179, 366 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 14 |
| BsmI | GAATGC | 1 cut(s) | 211 |
| BsnI | GGCC | 1 cut(s) | 39 |
| BsoBI | CYCGRG | 1 cut(s) | 365 |
| Bsp143I | GATC | 1 cut(s) | 166 |
| BspACI | CCGC | 2 cut(s) | 21, 381 |
| BspANI | GGCC | 1 cut(s) | 39 |
| BspLI | GGNNCC | 1 cut(s) | 78 |
| BspPI | GGATC | 1 cut(s) | 174 |
| BsrBI | CCGCTC | 1 cut(s) | 21 |
| BssECI | CCNNGG | 3 cut(s) | 179, 364, 365 |
| BssMI | GATC | 1 cut(s) | 166 |
| BstC8I | GCNNGC | 3 cut(s) | 23, 27, 31 |
| BstHHI | GCGC | 1 cut(s) | 118 |
| BstKTI | GATC | 1 cut(s) | 169 |
| BstMBI | GATC | 1 cut(s) | 166 |
| BstSCI | CCNGG | 3 cut(s) | 178, 364, 365 |
| BsuRI | GGCC | 1 cut(s) | 39 |
| Cac8I | GCNNGC | 3 cut(s) | 23, 27, 31 |
| CfoI | GCGC | 1 cut(s) | 118 |
| Cfr13I | GGNCC | 2 cut(s) | 38, 378 |
| Cfr9I | CCCGGG | 1 cut(s) | 365 |
| CviAII | CATG | 1 cut(s) | 42 |
| CviJI | RGCY | 3 cut(s) | 39, 84, 96 |
| CviKI_1 | RGCY | 3 cut(s) | 39, 84, 96 |
| DpnI | GATC | 1 cut(s) | 168 |
| DpnII | GATC | 1 cut(s) | 166 |
| Eco47I | GGWCC | 1 cut(s) | 378 |
| Eco88I | CYCGRG | 1 cut(s) | 365 |
| FaeI | CATG | 1 cut(s) | 45 |
| FaiI | YATR | 9 cut(s) | 43, 112, 114, 152, 158, 300, 302, 315, 351 |
| FatI | CATG | 1 cut(s) | 41 |
| FauI | CCCGC | 1 cut(s) | 14 |
| FauNDI | CATATG | 1 cut(s) | 300 |
| FspAI | RTGCGCAY | 1 cut(s) | 117 |
| FspBI | CTAG | 2 cut(s) | 81, 275 |
| FspI | TGCGCA | 1 cut(s) | 117 |
| GlaI | GCGC | 1 cut(s) | 117 |
| HaeIII | GGCC | 1 cut(s) | 39 |
| HapII | CCGG | 2 cut(s) | 179, 366 |
| HhaI | GCGC | 1 cut(s) | 118 |
| Hin1II | CATG | 1 cut(s) | 45 |
| Hin6I | GCGC | 1 cut(s) | 116 |
| HinP1I | GCGC | 1 cut(s) | 116 |
| HinfI | GANTC | 1 cut(s) | 4 |
| HpaII | CCGG | 2 cut(s) | 179, 366 |
| HphI | GGTGA | 1 cut(s) | 353 |
| Hpy188I | TCNGA | 1 cut(s) | 175 |
| HpyCH4V | TGCA | 3 cut(s) | 209, 313, 336 |
| Hsp92II | CATG | 1 cut(s) | 45 |
| HspAI | GCGC | 1 cut(s) | 116 |
| Kzo9I | GATC | 1 cut(s) | 166 |
| LmnI | GCTCC | 1 cut(s) | 18 |
| LpnPI | CCDG | 4 cut(s) | 15, 24, 192, 379 |
| MaeI | CTAG | 2 cut(s) | 81, 275 |
| MaeIII | GTNAC | 1 cut(s) | 303 |
| MalI | GATC | 1 cut(s) | 168 |
| MbiI | CCGCTC | 1 cut(s) | 21 |
| MboI | GATC | 1 cut(s) | 166 |
| MfeI | CAATTG | 2 cut(s) | 142, 331 |
| MluCI | AATT | 8 cut(s) | 107, 122, 142, 212, 246, 331, 346, 372 |
| MmeI | TCCRAC | 1 cut(s) | 26 |
| MnlI | CCTC | 5 cut(s) | 64, 67, 141, 183, 226 |
| MseI | TTAA | 5 cut(s) | 125, 215, 267, 371, 385 |
| MspI | CCGG | 2 cut(s) | 179, 366 |
| MspR9I | CCNGG | 3 cut(s) | 180, 366, 367 |
| MunI | CAATTG | 2 cut(s) | 142, 331 |
| Mva1269I | GAATGC | 1 cut(s) | 211 |
| NciI | CCSGG | 3 cut(s) | 180, 366, 367 |
| NdeI | CATATG | 1 cut(s) | 300 |
| NdeII | GATC | 1 cut(s) | 166 |
| NlaIII | CATG | 1 cut(s) | 45 |
| NlaIV | GGNNCC | 1 cut(s) | 78 |
| NsbI | TGCGCA | 1 cut(s) | 117 |
| PctI | GAATGC | 1 cut(s) | 211 |
| PfeI | GAWTC | 1 cut(s) | 4 |
| PspN4I | GGNNCC | 1 cut(s) | 78 |
| PspPI | GGNCC | 2 cut(s) | 38, 378 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 154, 186 |
| SaqAI | TTAA | 5 cut(s) | 125, 215, 267, 371, 385 |
| Sau3AI | GATC | 1 cut(s) | 166 |
| Sau96I | GGNCC | 2 cut(s) | 38, 378 |
| ScrFI | CCNGG | 3 cut(s) | 180, 366, 367 |
| SetI | ASST | 6 cut(s) | 13, 78, 86, 98, 237, 380 |
| SinI | GGWCC | 1 cut(s) | 378 |
| SmaI | CCCGGG | 1 cut(s) | 367 |
| Sse9I | AATT | 8 cut(s) | 107, 122, 142, 212, 246, 331, 346, 372 |
| SsiI | CCGC | 2 cut(s) | 21, 381 |
| SspMI | CTAG | 2 cut(s) | 81, 275 |
| StyD4I | CCNGG | 3 cut(s) | 178, 364, 365 |
| TasI | AATT | 8 cut(s) | 107, 122, 142, 212, 246, 331, 346, 372 |
| TfiI | GAWTC | 1 cut(s) | 4 |
| Tru1I | TTAA | 5 cut(s) | 125, 215, 267, 371, 385 |
| Tru9I | TTAA | 5 cut(s) | 125, 215, 267, 371, 385 |
| TspDTI | ATGAA | 1 cut(s) | 366 |
| TspMI | CCCGGG | 1 cut(s) | 365 |
| VpaK11BI | GGWCC | 1 cut(s) | 378 |
| XmaI | CCCGGG | 1 cut(s) | 365 |
| XspI | CTAG | 2 cut(s) | 81, 275 |