Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0008775

Physical Location & Seq

Genomic Coordinates Reverse (-)

4022295 .. 4028018

Gene Structure 5724 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g05190.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1641 bp

ATGACAGAGACTCCAAGGTCCTTAAATCTTTCTGGAATTTTTACCAAAGCAGATGGCTCTACCGGTGCTTCATATACCTTCAAGGATAGTGGTGTTTTATCCGATCGACATGCAACTACAAAGGAGATGGAGGTTGATATCCCAGATTCATCCAAGCTCTATTCTCCCTCTGGGATGGTTGAATCAAAGTCAGTGGGAACGTTTTCACCTTTCCAAAAGCAAGATAATCACAAGGGTCTCTTTGTGGATAGGGGTGTTGGATCGATCCCTTGTTTCTTGCTTCTTCCTAGGCTAGTTAAATCATCTAGTACTAGTACTTTCTCCGAGTCCAGATTTGATACAGAAAAAAAGAATTCGATGCCAGAAGCTGCTGGAGCGGTTGCGGCTGCAGCTGTAGCTGATCAAATGCTTGGACCAAAGGAAGATAAGCATTTGGCAATTGTCCTGGTTGGTTTGCCTGCTCGTGGAAAAACTTTTACAGCAGCTAAGCTTACAAGGTATCTCCGCTGGTTGGGTCATGATACCAAGCACTTCAATATTGGAAAGTACCGCCGTCTTAAGCATGGAGCTAATCAGACTGCTGATTTTTTCCGACCTGACAACCCTGAAGGCATGGAGGCACGTAATGAGGTAGCAGCCCTGGCATTCGATGACATGGTTTCTTGGATGCAAGAGGGTGGCCAGGTAGGAATATTTGATGCCACAAACAGTTCAAGGAAACGGAGAAATATGCTCATGAAATTGGCTGAAGGAAAGTGCAAGATTATTTTTCTGGAAACATTATGCAACGATGAACGCATTATAGAAAGAAATATACGTCTTAAAATTCAGCAAAGTCCCGATTATGCAGAACAGACAGATTTTGAGGCTGGGTTACAGGATTTCAAAAGTCGACTGGCTTATTATGAAAAAGTTTATGAGCCAGTAGAGGAAGGGTCGTACATCAAAATGATTGATATGGTCAGTGGACATGGAGGCCAAATACAAGTGAACAACATCAGTGGCTATCTTCCTGGACGAATTGTTTTCTTCCTGGTGAATACTCACCTCACGCCCCGCCCAATATTACTTACTAGGCATGGAGAGAGTATGGATAATGTTAGAGGCAGAATTGGAGGAGACAATCCTTTGAGTGATACAGGAGAAATTTATGCAAAGAAACTTGCTAACTTTGTTGAAAAGCGACTGAAATCAGAACGTGCTGCTTCTATTTGGACTAGCACGCTGCAGCGAACAATTTTGACAGCAAGTCCCATTGTAGGATTTCCCAAGATACAATGGCGTGCACTGGATGAGATAAATGCTGGAGCCTGTGATGGAATGACGTATGAAGAGATACAGAAAAACATGCCGAACGAGTATGAAGCACGTAATAAAGACAAACTGAGGTATCGGTATCCTCGTGGAGAATCTTATTTAGATGTTATCCAAAGGCTAGAGCCAGTAATCATTGAACTCGAACGACAACGTGCACCTGTTGTGGTTATATCTCACCAGGCTGTTTTGAGAGCGTTATATGCTTACTTTGCTGATAGGCCTCTGAAAGAGGTTCCACACATTGAGATGCCACTTCACACCATCATAGAGATTCAAATGGGAGTTACAGGCGTACAGGAGAAAAGATACAAGCTCATGGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005975 GO:0005996 GO:0006000 GO:0006002 GO:0006003 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0019318 GO:0019637 GO:0043609 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0065007 GO:0071704 GO:0071944 GO:1901135

KEGG Pathways

Metabolic & Signaling

ko00051 ko04066 ko04152 map00051 map04066 map04152

Pfam Domains

Protein Families

6PF2K CBM_20 His_Phos_1

Protein Analysis

547

Amino Acids

61.48

Weight (kDa)

8.71

Isoelectric Point (pI)

42.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008775)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07110
fragaria_vesca	FvH4_3g39080 FvH4_3g39080 FvH4_3g39080 FvH4_3g39080
malus_domestica	MD03G1064800.v1.1 MD11G1068800.v1.1
prunus_persica	Prupe.6G053800_v2.0.a1 Prupe.6G053800_v2.0.a1 Prupe.6G053800_v2.0.a1
pyrus_communis	pycom03g05190 pycom11g05730
rosa_chinensis	RchiOBHm_Chr5g0070401
rosa_laevigata	RLG00000036130
rosa_multiflora	Rmu_sc0007961.1_g000013
rosa_roxburghii	Rroxscaffold_1G00010800
rosa_rugosa	Rorug05G0405600 Rorug05G0405700.1
rosa_samantha	Rh5AG461100 Rh5BG479400 Rh5CG503600 Rh5DG491400
rosa_wichuraiana	Rw5G042980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	16
AccBSI	CCGCTC	1 cut(s)	377
AccI	GTMKAC	1 cut(s)	892
AciI	CCGC	5 cut(s)	377, 383, 505, 550, 1057
AclI	AACGTT	1 cut(s)	200
AclWI	GGATC	2 cut(s)	259, 268
AcoI	YGGCCR	1 cut(s)	679
AcsI	RAATTY	4 cut(s)	36, 352, 825, 1146
AcuI	CTGAAG	2 cut(s)	627, 768
AfaI	GTAC	5 cut(s)	310, 316, 548, 941, 1611
AfiI	CCNNNNNNNGG	3 cut(s)	464, 511, 1259
AflII	CTTAAG	1 cut(s)	557
AgeI	ACCGGT	1 cut(s)	62
AgsI	TTSAA	8 cut(s)	82, 182, 535, 714, 886, 1178, 1454, 1592
AhdI	GACNNNNNGTC	1 cut(s)	1248
AhlI	ACTAGT	1 cut(s)	311
AjnI	CCWGG	6 cut(s)	444, 639, 681, 1012, 1032, 1494
AluBI	AGCT	8 cut(s)	157, 368, 392, 398, 485, 490, 569, 1630
AluI	AGCT	8 cut(s)	157, 368, 392, 398, 485, 490, 569, 1630
Alw21I	GWGCWC	2 cut(s)	1288, 1474
Alw26I	GTCTC	3 cut(s)	2, 242, 1113
Alw44I	GTGCAC	2 cut(s)	1284, 1470
AlwI	GGATC	2 cut(s)	259, 268
AlwNI	CAGNNNCTG	1 cut(s)	368
AoxI	GGCC	3 cut(s)	679, 976, 1535
ApaLI	GTGCAC	2 cut(s)	1284, 1470
ApeKI	GCWGC	8 cut(s)	368, 386, 389, 482, 635, 1202, 1225, 1228
ApoI	RAATTY	4 cut(s)	36, 352, 825, 1146
AsiGI	ACCGGT	1 cut(s)	62
Asp700I	GAANNNNTTC	1 cut(s)	202
AspA2I	CCTAGG	1 cut(s)	287
AspS9I	GGNCC	2 cut(s)	18, 413
AsuHPI	GGTGA	4 cut(s)	198, 1037, 1048, 1484
AvaII	GGWCC	2 cut(s)	18, 413
AvrII	CCTAGG	1 cut(s)	287
BaeGI	GKGCMC	2 cut(s)	1288, 1474
BaeI	ACNNNNGTAYC	2 cut(s)	1373, 1406
BalI	TGGCCA	1 cut(s)	681
BauI	CACGAG	2 cut(s)	462, 1401
Bbv12I	GWGCWC	2 cut(s)	1288, 1474
BbvI	GCAGC	8 cut(s)	355, 373, 401, 494, 647, 1189, 1212, 1240
BccI	CCATC	5 cut(s)	47, 121, 169, 1310, 1586
BceAI	ACGGC	1 cut(s)	537
BcgI	CGANNNNNNTGC	2 cut(s)	92, 126
BciT130I	CCWGG	6 cut(s)	446, 641, 683, 1014, 1034, 1496
BciVI	GTATCC	1 cut(s)	1407
BclI	TGATCA	1 cut(s)	400
BcoDI	GTCTC	3 cut(s)	2, 242, 1113
BcuI	ACTAGT	1 cut(s)	311
BfaI	CTAG	7 cut(s)	288, 293, 306, 312, 1074, 1218, 1436
BfmI	CTRYAG	3 cut(s)	387, 393, 1226
BfrI	CTTAAG	1 cut(s)	557
BfuI	GTATCC	1 cut(s)	1407
BisI	GCNGC	9 cut(s)	369, 384, 387, 390, 483, 636, 1203, 1226, 1229
BlnI	CCTAGG	1 cut(s)	287
BlpI	GCTNAGC	1 cut(s)	486
BlsI	GCNGC	9 cut(s)	370, 385, 388, 391, 484, 637, 1204, 1227, 1230
BmcAI	AGTACT	2 cut(s)	310, 316
Bme1390I	CCNGG	6 cut(s)	446, 641, 683, 1014, 1034, 1496
Bme18I	GGWCC	2 cut(s)	18, 413
BmeRI	GACNNNNNGTC	1 cut(s)	1248
BmgT120I	GGNCC	2 cut(s)	18, 413
BmiI	GGNNCC	2 cut(s)	1309, 1551
BmrFI	CCNGG	6 cut(s)	446, 641, 683, 1014, 1034, 1496
BmsI	GCATC	4 cut(s)	348, 657, 688, 1554
BpmI	CTGGAG	2 cut(s)	393, 1326
Bpu1102I	GCTNAGC	1 cut(s)	486
Bsa29I	ATCGAT	1 cut(s)	263
BsaAI	YACGTR	2 cut(s)	623, 1370
BsaI	GGTCTC	1 cut(s)	242
BsaJI	CCNNGG	3 cut(s)	14, 287, 639
BsaWI	WCCGGW	1 cut(s)	62
BsaXI	ACNNNNNCTCC	1 cut(s)	25
Bsc4I	CCNNNNNNNGG	3 cut(s)	464, 511, 1259
Bse118I	RCCGGY	1 cut(s)	62
Bse1I	ACTGG	4 cut(s)	900, 923, 1293, 1442
BseBI	CCWGG	6 cut(s)	446, 641, 683, 1014, 1034, 1496
BseCI	ATCGAT	1 cut(s)	263
BseDI	CCNNGG	3 cut(s)	14, 287, 639
BseGI	GGATG	4 cut(s)	149, 180, 672, 1297
BseLI	CCNNNNNNNGG	3 cut(s)	464, 511, 1259
BseMII	CTCAG	1 cut(s)	1376
BseNI	ACTGG	4 cut(s)	900, 923, 1293, 1442
BseRI	GAGGAG	1 cut(s)	1131
BseSI	GKGCMC	2 cut(s)	1288, 1474
BseXI	GCAGC	8 cut(s)	355, 373, 401, 494, 647, 1189, 1212, 1240
BseYI	CCCAGC	1 cut(s)	869
Bsh1285I	CGRYCG	1 cut(s)	106
BshFI	GGCC	3 cut(s)	681, 978, 1537
BshTI	ACCGGT	1 cut(s)	62
BshVI	ATCGAT	1 cut(s)	263
BsiEI	CGRYCG	1 cut(s)	106
BsiHKAI	GWGCWC	2 cut(s)	1288, 1474
BsiSI	CCGG	1 cut(s)	63
BslFI	GGGAC	2 cut(s)	822, 1236
BslI	CCNNNNNNNGG	3 cut(s)	464, 511, 1259
BsmAI	GTCTC	3 cut(s)	2, 242, 1113
BsmFI	GGGAC	2 cut(s)	822, 1236
BsmI	GAATGC	1 cut(s)	644
BsnI	GGCC	3 cut(s)	681, 978, 1537
Bso31I	GGTCTC	1 cut(s)	242
Bsp1286I	GDGCHC	2 cut(s)	1288, 1474
Bsp143I	GATC	4 cut(s)	103, 260, 264, 400
Bsp1720I	GCTNAGC	1 cut(s)	486
BspACI	CCGC	5 cut(s)	377, 383, 505, 550, 1057
BspANI	GGCC	3 cut(s)	681, 978, 1537
BspCNI	CTCAG	1 cut(s)	1377
BspDI	ATCGAT	1 cut(s)	263
BspHI	TCATGA	2 cut(s)	517, 735
BspLI	GGNNCC	2 cut(s)	1309, 1551
BspMAI	CTGCAG	2 cut(s)	391, 1230
BspPI	GGATC	2 cut(s)	259, 268
BspTI	CTTAAG	1 cut(s)	557
BspTNI	GGTCTC	1 cut(s)	242
BsrBI	CCGCTC	1 cut(s)	377
BsrFI	RCCGGY	1 cut(s)	62
BsrI	ACTGG	4 cut(s)	900, 923, 1293, 1442
BssAI	RCCGGY	1 cut(s)	62
BssECI	CCNNGG	3 cut(s)	14, 287, 639
BssMI	GATC	4 cut(s)	103, 260, 264, 400
BssSI	CACGAG	2 cut(s)	462, 1401
BssT1I	CCWWGG	2 cut(s)	14, 287
Bst2BI	CACGAG	2 cut(s)	462, 1401
Bst2UI	CCWGG	6 cut(s)	446, 641, 683, 1014, 1034, 1496
Bst4CI	ACNGT	1 cut(s)	710
Bst6I	CTCTTC	1 cut(s)	1326
BstAFI	CTTAAG	1 cut(s)	557
BstBAI	YACGTR	2 cut(s)	623, 1370
BstC8I	GCNNGC	3 cut(s)	459, 1223, 1284
BstDEI	CTNAG	2 cut(s)	486, 1385
BstF5I	GGATG	4 cut(s)	149, 180, 672, 1297
BstKTI	GATC	4 cut(s)	106, 263, 267, 403
BstMAI	GTCTC	3 cut(s)	2, 242, 1113
BstMBI	GATC	4 cut(s)	103, 260, 264, 400
BstMCI	CGRYCG	1 cut(s)	106
BstMWI	GCNNNNNNNGC	7 cut(s)	374, 383, 389, 395, 641, 1517, 1526
BstNI	CCWGG	6 cut(s)	446, 641, 683, 1014, 1034, 1496
BstNSI	RCATGY	2 cut(s)	113, 1351
BstSCI	CCNGG	6 cut(s)	444, 639, 681, 1012, 1032, 1494
BstSFI	CTRYAG	3 cut(s)	387, 393, 1226
BstSLI	GKGCMC	2 cut(s)	1288, 1474
BstV1I	GCAGC	8 cut(s)	355, 373, 401, 494, 647, 1189, 1212, 1240
Bsu15I	ATCGAT	1 cut(s)	263
BsuI	GTATCC	1 cut(s)	1407
BsuRI	GGCC	3 cut(s)	681, 978, 1537
BsuTUI	ATCGAT	1 cut(s)	263
BtsCI	GGATG	4 cut(s)	149, 180, 672, 1297
BtsIMutI	CAGTG	4 cut(s)	198, 970, 1006, 1286
Cac8I	GCNNGC	3 cut(s)	459, 1223, 1284
CaiI	CAGNNNCTG	1 cut(s)	368
CciI	TCATGA	2 cut(s)	517, 735
Cfr10I	RCCGGY	1 cut(s)	62
Cfr13I	GGNCC	2 cut(s)	18, 413
ClaI	ATCGAT	1 cut(s)	263
Csp6I	GTAC	5 cut(s)	309, 315, 547, 940, 1610
CspAI	ACCGGT	1 cut(s)	62
CspCI	CAANNNNNGTGG	6 cut(s)	70, 105, 174, 209, 982, 1017
CviQI	GTAC	5 cut(s)	309, 315, 547, 940, 1610
DdeI	CTNAG	2 cut(s)	486, 1385
DpnI	GATC	4 cut(s)	105, 262, 266, 402
DpnII	GATC	4 cut(s)	103, 260, 264, 400
DrdI	GACNNNNNNGTC	1 cut(s)	16
DriI	GACNNNNNGTC	1 cut(s)	1248
DseDI	GACNNNNNNGTC	1 cut(s)	16
EaeI	YGGCCR	1 cut(s)	679
Eam1104I	CTCTTC	1 cut(s)	1326
Eam1105I	GACNNNNNGTC	1 cut(s)	1248
EarI	CTCTTC	1 cut(s)	1326
Eco130I	CCWWGG	2 cut(s)	14, 287
Eco147I	AGGCCT	1 cut(s)	1537
Eco31I	GGTCTC	1 cut(s)	242
Eco32I	GATATC	1 cut(s)	139
Eco47I	GGWCC	2 cut(s)	18, 413
Eco57I	CTGAAG	2 cut(s)	627, 768
EcoO109I	RGGNCCY	1 cut(s)	18
EcoRI	GAATTC	1 cut(s)	352
EcoRII	CCWGG	6 cut(s)	444, 639, 681, 1012, 1032, 1494
EcoRV	GATATC	1 cut(s)	139
EcoT14I	CCWWGG	2 cut(s)	14, 287
ErhI	CCWWGG	2 cut(s)	14, 287
FalI	AAGNNNNNCTT	2 cut(s)	224, 256
FaqI	GGGAC	2 cut(s)	822, 1236
FauI	CCCGC	1 cut(s)	1064
FbaI	TGATCA	1 cut(s)	400
FblI	GTMKAC	1 cut(s)	892
Fnu4HI	GCNGC	9 cut(s)	369, 384, 387, 390, 483, 636, 1203, 1226, 1229
FokI	GGATG	4 cut(s)	136, 187, 679, 1304
Fsp4HI	GCNGC	9 cut(s)	369, 384, 387, 390, 483, 636, 1203, 1226, 1229
FspBI	CTAG	7 cut(s)	288, 293, 306, 312, 1074, 1218, 1436
GluI	GCNGC	9 cut(s)	369, 384, 387, 390, 483, 636, 1203, 1226, 1229
GsaI	CCCAGC	1 cut(s)	873
GsuI	CTGGAG	2 cut(s)	393, 1326
HaeIII	GGCC	3 cut(s)	681, 978, 1537
HapII	CCGG	1 cut(s)	63
HincII	GTYRAC	1 cut(s)	893
HindII	GTYRAC	1 cut(s)	893
HindIII	AAGCTT	1 cut(s)	488
HinfI	GANTC	6 cut(s)	10, 146, 182, 326, 1409, 1588
HpaII	CCGG	1 cut(s)	63
HphI	GGTGA	4 cut(s)	198, 1037, 1048, 1484
Hpy166II	GTNNAC	5 cut(s)	893, 968, 991, 1286, 1472
Hpy188I	TCNGA	6 cut(s)	103, 325, 576, 593, 1195, 1542
Hpy188III	TCNNGA	6 cut(s)	33, 330, 518, 736, 773, 839
Hpy8I	GTNNAC	5 cut(s)	893, 968, 991, 1286, 1472
HpyAV	CCTTC	4 cut(s)	88, 602, 743, 926
HpyCH4III	ACNGT	1 cut(s)	710
HpyCH4IV	ACGT	7 cut(s)	200, 622, 817, 1198, 1325, 1369, 1468
HpyF10VI	GCNNNNNNNGC	7 cut(s)	374, 383, 389, 395, 641, 1517, 1526
HpyF3I	CTNAG	2 cut(s)	486, 1385
HpySE526I	ACGT	7 cut(s)	200, 622, 817, 1198, 1325, 1369, 1468
Ksp22I	TGATCA	1 cut(s)	400
Kzo9I	GATC	4 cut(s)	103, 260, 264, 400
LmnI	GCTCC	3 cut(s)	374, 566, 1307
Lsp1109I	GCAGC	8 cut(s)	355, 373, 401, 494, 647, 1189, 1212, 1240
LweI	GCATC	4 cut(s)	348, 657, 688, 1554
MaeI	CTAG	7 cut(s)	288, 293, 306, 312, 1074, 1218, 1436
MaeII	ACGT	7 cut(s)	200, 622, 817, 1198, 1325, 1369, 1468
MaeIII	GTNAC	2 cut(s)	873, 1600
MalI	GATC	4 cut(s)	105, 262, 266, 402
MbiI	CCGCTC	1 cut(s)	377
MboI	GATC	4 cut(s)	103, 260, 264, 400
MboII	GAAGA	5 cut(s)	275, 434, 1001, 1021, 1343
MfeI	CAATTG	1 cut(s)	438
MhlI	GDGCHC	2 cut(s)	1288, 1474
MlsI	TGGCCA	1 cut(s)	681
MluCI	AATT	9 cut(s)	36, 352, 438, 740, 825, 1020, 1110, 1146, 1236
MluNI	TGGCCA	1 cut(s)	681
MlyI	GAGTC	2 cut(s)	4, 335
MmeI	TCCRAC	2 cut(s)	238, 616
Mox20I	TGGCCA	1 cut(s)	681
MroXI	GAANNNNTTC	1 cut(s)	202
MscI	TGGCCA	1 cut(s)	681
MseI	TTAA	4 cut(s)	23, 297, 558, 822
MslI	CAYNNNNRTG	2 cut(s)	947, 1562
Msp20I	TGGCCA	1 cut(s)	681
MspA1I	CMGCKG	2 cut(s)	392, 507
MspCI	CTTAAG	1 cut(s)	557
MspI	CCGG	1 cut(s)	63
MspR9I	CCNGG	6 cut(s)	446, 641, 683, 1014, 1034, 1496
MunI	CAATTG	1 cut(s)	438
Mva1269I	GAATGC	1 cut(s)	644
MvaI	CCWGG	6 cut(s)	446, 641, 683, 1014, 1034, 1496
MwoI	GCNNNNNNNGC	7 cut(s)	374, 383, 389, 395, 641, 1517, 1526
NdeII	GATC	4 cut(s)	103, 260, 264, 400
NlaIV	GGNNCC	2 cut(s)	1309, 1551
NspI	RCATGY	2 cut(s)	113, 1351
PagI	TCATGA	2 cut(s)	517, 735
PceI	AGGCCT	1 cut(s)	1537
PcsI	WCGNNNNNNNCGW	1 cut(s)	1399
PctI	GAATGC	1 cut(s)	644
PdmI	GAANNNNTTC	1 cut(s)	202
PfeI	GAWTC	4 cut(s)	146, 182, 1409, 1588
PfoI	TCCNGGA	1 cut(s)	1012
PinAI	ACCGGT	1 cut(s)	62
PkrI	GCNGC	9 cut(s)	370, 385, 388, 391, 484, 637, 1204, 1227, 1230
Ple19I	CGATCG	1 cut(s)	106
PleI	GAGTC	2 cut(s)	4, 334
PpsI	GAGTC	2 cut(s)	4, 334
Ppu21I	YACGTR	2 cut(s)	623, 1370
PpuMI	RGGWCCY	1 cut(s)	18
Psp1406I	AACGTT	1 cut(s)	200
Psp5II	RGGWCCY	1 cut(s)	18
Psp6I	CCWGG	6 cut(s)	444, 639, 681, 1012, 1032, 1494
PspFI	CCCAGC	1 cut(s)	869
PspGI	CCWGG	6 cut(s)	444, 639, 681, 1012, 1032, 1494
PspN4I	GGNNCC	2 cut(s)	1309, 1551
PspPI	GGNCC	2 cut(s)	18, 413
PspPPI	RGGWCCY	1 cut(s)	18
PstI	CTGCAG	2 cut(s)	391, 1230
PstNI	CAGNNNCTG	1 cut(s)	368
PvuI	CGATCG	1 cut(s)	106
PvuII	CAGCTG	1 cut(s)	392
RsaI	GTAC	5 cut(s)	310, 316, 548, 941, 1611
RsaNI	GTAC	5 cut(s)	309, 315, 547, 940, 1610
RseI	CAYNNNNRTG	2 cut(s)	947, 1562
SalI	GTCGAC	1 cut(s)	891
SaqAI	TTAA	4 cut(s)	23, 297, 558, 822
SatI	GCNGC	9 cut(s)	369, 384, 387, 390, 483, 636, 1203, 1226, 1229
Sau3AI	GATC	4 cut(s)	103, 260, 264, 400
Sau96I	GGNCC	2 cut(s)	18, 413
ScaI	AGTACT	2 cut(s)	310, 316
SchI	GAGTC	2 cut(s)	4, 335
ScrFI	CCNGG	6 cut(s)	446, 641, 683, 1014, 1034, 1496
SduI	GDGCHC	2 cut(s)	1288, 1474
SfaNI	GCATC	4 cut(s)	348, 657, 688, 1554
SfcI	CTRYAG	3 cut(s)	387, 393, 1226
SinI	GGWCC	2 cut(s)	18, 413
SmiMI	CAYNNNNRTG	2 cut(s)	947, 1562
SmlI	CTYRAG	1 cut(s)	557
SmoI	CTYRAG	1 cut(s)	557
SpeI	ACTAGT	1 cut(s)	311
Sse9I	AATT	9 cut(s)	36, 352, 438, 740, 825, 1020, 1110, 1146, 1236
SseBI	AGGCCT	1 cut(s)	1537
SsiI	CCGC	5 cut(s)	377, 383, 505, 550, 1057
SspI	AATATT	3 cut(s)	538, 693, 1065
SspMI	CTAG	7 cut(s)	288, 293, 306, 312, 1074, 1218, 1436
StuI	AGGCCT	1 cut(s)	1537
StyD4I	CCNGG	6 cut(s)	444, 639, 681, 1012, 1032, 1494
StyI	CCWWGG	2 cut(s)	14, 287
TaaI	ACNGT	1 cut(s)	710
TaiI	ACGT	7 cut(s)	203, 625, 820, 1201, 1328, 1372, 1471
TaqI	TCGA	6 cut(s)	106, 263, 356, 648, 892, 1458
TasI	AATT	9 cut(s)	36, 352, 438, 740, 825, 1020, 1110, 1146, 1236
TatI	WGTACW	2 cut(s)	308, 314
TauI	GCSGC	1 cut(s)	386
TfiI	GAWTC	4 cut(s)	146, 182, 1409, 1588
Tru1I	TTAA	4 cut(s)	23, 297, 558, 822
Tru9I	TTAA	4 cut(s)	23, 297, 558, 822
TscAI	CASTG	4 cut(s)	198, 970, 1006, 1293
TseI	GCWGC	8 cut(s)	368, 386, 389, 482, 635, 1202, 1225, 1228
TspDTI	ATGAA	7 cut(s)	60, 138, 752, 807, 921, 1344, 1377
TspGWI	ACGGA	1 cut(s)	736
TspRI	CASTG	4 cut(s)	198, 970, 1006, 1293
Vha464I	CTTAAG	1 cut(s)	557
VneI	GTGCAC	2 cut(s)	1284, 1470
VpaK11BI	GGWCC	2 cut(s)	18, 413
XapI	RAATTY	4 cut(s)	36, 352, 825, 1146
XceI	RCATGY	2 cut(s)	113, 1351
XmaJI	CCTAGG	1 cut(s)	287
XmiI	GTMKAC	1 cut(s)	892
XmnI	GAANNNNTTC	1 cut(s)	202
XspI	CTAG	7 cut(s)	288, 293, 306, 312, 1074, 1218, 1436
ZrmI	AGTACT	2 cut(s)	310, 316

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.