Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0008775

Physical Location & Seq

Genomic Coordinates Forward (+)

69961566 .. 69969260

Gene Structure 7695 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG503600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2097 bp

ATGGGGACCGGCGCGTCCAAGCGGACGCAGGACGGCTCTCACGCCGGCGAAGCCCCCGAGGAGGAGGAAGAGTACCTCGACCAAGGCGGCGGCGGCCAGCTCTACGTCTCCTTGAAGATGGAGAACAATTACAAGCTCAAGAAAGGCGAGCTCCTCCCTCACGTCTTCGGCTCCGTCCCCCTCGTCGGCTCCTGGGACCCCAACAAAGCCCTTTCTATGGAGCGTGAATCCACCTCCATGTGGGAGCTCAGCTTCGTTGTTCCTCCGAATCACGAGACTCTGGATTTCAAGTTCCTGTTGAAGTCCAAGTACAACGCCAATGCGGTTTATGTGGTTGAGGAGGGTCCGAATCGCCAGCTCATAGGGGGAGCCTTGCAAGGGGATGCTAGGCAGGCTCTGTTTAGGATTGGTAGTGATGAGGTGCTCGAGTACCGGGTGTTTATTAAGGCGGATAGAGTATCGCCTTTTGATCTTGCAGCTAGTTGGAGGGCTTATCAGGAGAATCTCCGGCCTTCTGCGGTTCGCGGCATTCCTGATGTCAGTATTGGCTCAGTGCCGGAAATTGGTGGTGAGAATGGCTCCTCAGCAAGTTTGGAGCTTGATCTCGAACATTATGTTGTTCCAGCTCCTTCGGCTTCAGGTCCAGGTTATGCAGCTAACAATACAGAGACTCCAAGGTCATTATCTCTAACTGGGGTTTTTACTAAATCCGATGGCTCTACCAATTCCTCGTATACCTTCAAGGATAGCGGTATTCCGATAGATCGATCAAGCAAAAAGGAGATGGAGGTTGTTATTCCAGATTCATCAAAAATGTATTCTTCTTCTGGGATGGTTGAATCAAAGTCCGTGGGAACATTTTCGCCTTTCCAAAAGCAAGACAGTCAGAGGGGTCTCTTTGTGGATAGAGGTGTTGGGTCTCCTAGGCTCGTTAAATCATCCAGCTCCAGTGCATTCTCTCCTGAGGTCAGGAAGGAGACAGAAACAAAGAACTCAATGCCAGAAGCTGCTGGAGCTGTTGCAGCTGCAGCCATAGCTGATCAAATGCTCGGACCAAAGGAAGATGTGCATTTGGCAATTGTCCTGGTTGGTTTGCCAGCTCGAGGAAAAACTTTTACGGCAGCTAAACTTACAAGGTATCTTCGATGGTTGGGTCATGATACCAAACACTTCAATGTTGGAAAGTACCGTCGTCTTAAGCATGGGACTAATCAGACTGCTGATTTTTTCCGAGCTGACAACCCTGAAGGCATGGAGGCACGTAACGAGGTAGCAGCCTTGGCATTTGATGACATGGTTTCTTGGATGCAAGAAGGTGGCCAGGTAGGAATATTTGATGCCACAAACAGCACAAAGAAACGGAGGAATATGCTCATGAAAATGGCTGAAGGAAAATGCAAGATTATCTTTCTGGAAACAATATGCAACGATGAACGAATTATAGAAAGAAATATACGTCTTAAAATTCAACAAAGTCCTGACTATGCAGAAGAGCCAGATTTTGAGGCTGGATGCAAGGACTTCAAAGATCGACTTTCTTATTATGAAAAAGTTTATGATCCGGTAGAAGAAGGGTCGTATATCAAAATGATTGACATGGTCAGTGGACATGGAGGTCAAATACAAGTGAACAATATCAGTGGGTATCTTCCTGGACGAATTGTTTTTTTCCTGGTGAATACACATCTCACACCCCGGCCAATCTTACTTACAAGGCATGGTGAGAGCATGGATAATCTCAGAGGAAGAATAGGTGGAGACCATGCTTTGAGTGATGCCGGAGAACTTTATGCCAAGAAACTTGTTAACTTTGTTGAAAAGCGACTGAAATCAGAGCGCGCTGCTTCAATTTGGACTAGCACGCTGGAGCGAACAATTCTGACCGCAGCTCCCATTTCGGGATTTCCCAAGATACAATGGCGTGCACTGGATGAGATTTATGCTGGAGTGTGTGATGGAATGACGTATGAGGAGATAAAGAAAAACATGCCAGAGGAATATGAGTATGTTGCATACTATCTCTCTTTCTCTAAAAGAAATTATAGAGAGAATGGAAAGCATTGCATTGTTTTTGAAGGTTCACTGAATAAGGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005975 GO:0005996 GO:0006000 GO:0006002 GO:0006003 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0019318 GO:0019637 GO:0043609 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0065007 GO:0071704 GO:0071944 GO:1901135

KEGG Pathways

Metabolic & Signaling

ko00051 ko04066 ko04152 map00051 map04066 map04152

Pfam Domains

Protein Families

6PF2K CBM_20 His_Phos_1

Protein Analysis

698

Amino Acids

77.37

Weight (kDa)

6.1

Isoelectric Point (pI)

40.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CBM_20	PF00686	55 - 120	1.5e-06	Starch binding domain
6PF2K	PF01591	349 - 565	4.4e-83	6-phosphofructo-2-kinase
AAA_33	PF13671	360 - 485	8.1e-06	AAA domain
His_Phos_1	PF00300	568 - 668	1.9e-17	Histidine phosphatase superfamily (branch 1)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008775)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07110
fragaria_vesca	FvH4_3g39080 FvH4_3g39080 FvH4_3g39080 FvH4_3g39080
malus_domestica	MD03G1064800.v1.1 MD11G1068800.v1.1
prunus_persica	Prupe.6G053800_v2.0.a1 Prupe.6G053800_v2.0.a1 Prupe.6G053800_v2.0.a1
pyrus_communis	pycom03g05190 pycom11g05730
rosa_chinensis	RchiOBHm_Chr5g0070401
rosa_laevigata	RLG00000036130
rosa_multiflora	Rmu_sc0007961.1_g000013
rosa_roxburghii	Rroxscaffold_1G00010800
rosa_rugosa	Rorug05G0405600 Rorug05G0405700.1
rosa_samantha	Rh5AG461100 Rh5BG479400 Rh5CG503600 Rh5DG491400
rosa_wichuraiana	Rw5G042980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	13, 676, 1614
AccI	GTMKAC	1 cut(s)	734
AccII	CGCG	3 cut(s)	14, 525, 1839
AclWI	GGATC	1 cut(s)	1553
AcoI	YGGCCR	3 cut(s)	94, 1318, 1697
AcsI	RAATTY	1 cut(s)	1464
AcuI	CTGAAG	3 cut(s)	621, 1266, 1407
AfaI	GTAC	4 cut(s)	74, 311, 431, 1187
AfiI	CCNNNNNNNGG	8 cut(s)	61, 185, 217, 240, 378, 563, 1103, 1898
AflII	CTTAAG	1 cut(s)	1196
AjiI	CACGTC	1 cut(s)	163
AjnI	CCWGG	6 cut(s)	191, 643, 1083, 1320, 1651, 1671
AloI	GAACNNNNNNTCC	2 cut(s)	275, 307
Alw21I	GWGCWC	4 cut(s)	153, 249, 426, 1927
Alw26I	GTCTC	7 cut(s)	112, 269, 662, 899, 924, 971, 1752
Alw44I	GTGCAC	1 cut(s)	1923
AlwI	GGATC	1 cut(s)	1553
AlwNI	CAGNNNCTG	2 cut(s)	397, 1007
Ama87I	CYCGRG	3 cut(s)	56, 425, 1101
AoxI	GGCC	4 cut(s)	94, 509, 1318, 1697
ApaLI	GTGCAC	1 cut(s)	1923
ApoI	RAATTY	1 cut(s)	1464
Asp700I	GAANNNNTTC	1 cut(s)	859
AspA2I	CCTAGG	1 cut(s)	923
AspLEI	GCGC	3 cut(s)	14, 1839, 1841
AspS9I	GGNCC	5 cut(s)	6, 196, 344, 641, 1052
AsuC2I	CCSGG	2 cut(s)	434, 1696
AsuHPI	GGTGA	3 cut(s)	581, 1687, 1733
AvaI	CYCGRG	3 cut(s)	56, 425, 1101
AvaII	GGWCC	5 cut(s)	6, 196, 344, 641, 1052
AvrII	CCTAGG	1 cut(s)	923
AxyI	CCTNAGG	1 cut(s)	963
BaeGI	GKGCMC	1 cut(s)	1927
BalI	TGGCCA	1 cut(s)	1320
BanII	GRGCYC	2 cut(s)	153, 249
BarI	GAAGNNNNNNTAC	2 cut(s)	293, 325
BauI	CACGAG	1 cut(s)	272
BbsI	GAAGAC	1 cut(s)	157
Bbv12I	GWGCWC	4 cut(s)	153, 249, 426, 1927
BbvCI	CCTCAGC	1 cut(s)	583
BccI	CCATC	6 cut(s)	112, 707, 778, 826, 1140, 1949
BceAI	ACGGC	2 cut(s)	49, 1134
BciT130I	CCWGG	6 cut(s)	193, 645, 1085, 1322, 1653, 1673
BclI	TGATCA	1 cut(s)	1039
BcnI	CCSGG	2 cut(s)	434, 1696
BcoDI	GTCTC	7 cut(s)	112, 269, 662, 899, 924, 971, 1752
BfaI	CTAG	4 cut(s)	387, 480, 924, 1857
BfmI	CTRYAG	1 cut(s)	1026
BfrI	CTTAAG	1 cut(s)	1196
BlnI	CCTAGG	1 cut(s)	923
BlpI	GCTNAGC	1 cut(s)	248
Bme1390I	CCNGG	8 cut(s)	193, 434, 645, 1085, 1322, 1653, 1673, 1696
Bme18I	GGWCC	5 cut(s)	6, 196, 344, 641, 1052
BmeT110I	CYCGRG	3 cut(s)	56, 425, 1101
BmgBI	CACGTC	1 cut(s)	163
BmgT120I	GGNCC	5 cut(s)	6, 196, 344, 641, 1052
BmiI	GGNNCC	8 cut(s)	7, 172, 190, 197, 198, 345, 370, 580
BmrFI	CCNGG	8 cut(s)	193, 434, 645, 1085, 1322, 1653, 1673, 1696
BmrI	ACTGGG	1 cut(s)	702
BmsI	GCATC	5 cut(s)	373, 1296, 1327, 1502, 1765
BmuI	ACTGGG	1 cut(s)	702
BpiI	GAAGAC	1 cut(s)	157
BplI	GAGNNNNNCTC	2 cut(s)	563, 595
BpmI	CTGGAG	4 cut(s)	931, 1032, 1886, 1965
Bpu10I	CCTNAGC	1 cut(s)	583
Bpu1102I	GCTNAGC	1 cut(s)	248
BpuEI	CTTGAG	1 cut(s)	122
BpuMI	CCSGG	2 cut(s)	434, 1696
Bsa29I	ATCGAT	1 cut(s)	766
BsaAI	YACGTR	1 cut(s)	1262
BsaI	GGTCTC	3 cut(s)	899, 924, 1752
BsaJI	CCNNGG	8 cut(s)	57, 82, 192, 674, 849, 923, 1278, 1694
BsaWI	WCCGGW	1 cut(s)	1561
BsaXI	ACNNNNNCTCC	6 cut(s)	56, 86, 655, 685, 1873, 1903
Bsc4I	CCNNNNNNNGG	8 cut(s)	61, 185, 217, 240, 378, 563, 1103, 1898
Bse118I	RCCGGY	2 cut(s)	8, 44
Bse1I	ACTGG	3 cut(s)	697, 948, 1932
Bse21I	CCTNAGG	1 cut(s)	963
Bse3DI	GCAATG	1 cut(s)	2059
BseBI	CCWGG	6 cut(s)	193, 645, 1085, 1322, 1653, 1673
BseCI	ATCGAT	1 cut(s)	766
BseDI	CCNNGG	8 cut(s)	57, 82, 192, 674, 849, 923, 1278, 1694
BseGI	GGATG	6 cut(s)	388, 837, 938, 1311, 1517, 1936
BseLI	CCNNNNNNNGG	8 cut(s)	61, 185, 217, 240, 378, 563, 1103, 1898
BseMI	GCAATG	1 cut(s)	2059
BseMII	CTCAG	5 cut(s)	262, 564, 597, 954, 1753
BseNI	ACTGG	3 cut(s)	697, 948, 1932
BsePI	GCGCGC	1 cut(s)	1837
BseRI	GAGGAG	6 cut(s)	74, 77, 143, 353, 571, 1985
BseSI	GKGCMC	1 cut(s)	1927
Bsh1236I	CGCG	3 cut(s)	14, 525, 1839
BshFI	GGCC	4 cut(s)	96, 511, 1320, 1699
BshVI	ATCGAT	1 cut(s)	766
BsiHKAI	GWGCWC	4 cut(s)	153, 249, 426, 1927
BsiHKCI	CYCGRG	3 cut(s)	56, 425, 1101
BsiSI	CCGG	8 cut(s)	9, 45, 433, 508, 557, 1562, 1696, 1779
BslFI	GGGAC	4 cut(s)	19, 161, 209, 1219
BslI	CCNNNNNNNGG	8 cut(s)	61, 185, 217, 240, 378, 563, 1103, 1898
BsmAI	GTCTC	7 cut(s)	112, 269, 662, 899, 924, 971, 1752
BsmBI	CGTCTC	1 cut(s)	112
BsmFI	GGGAC	4 cut(s)	19, 161, 209, 1219
BsmI	GAATGC	2 cut(s)	528, 953
BsnI	GGCC	4 cut(s)	96, 511, 1320, 1699
Bso31I	GGTCTC	3 cut(s)	899, 924, 1752
BsoBI	CYCGRG	3 cut(s)	56, 425, 1101
Bsp1286I	GDGCHC	4 cut(s)	153, 249, 426, 1927
Bsp143I	GATC	7 cut(s)	469, 601, 763, 767, 1039, 1528, 1558
Bsp1720I	GCTNAGC	1 cut(s)	248
BspANI	GGCC	4 cut(s)	96, 511, 1320, 1699
BspCNI	CTCAG	5 cut(s)	261, 563, 596, 955, 1752
BspDI	ATCGAT	1 cut(s)	766
BspFNI	CGCG	3 cut(s)	14, 525, 1839
BspHI	TCATGA	2 cut(s)	1156, 1374
BspLI	GGNNCC	8 cut(s)	7, 172, 190, 197, 198, 345, 370, 580
BspMAI	CTGCAG	1 cut(s)	1030
BspPI	GGATC	1 cut(s)	1553
BspQI	GCTCTTC	1 cut(s)	1485
BspTI	CTTAAG	1 cut(s)	1196
BspTNI	GGTCTC	3 cut(s)	899, 924, 1752
BsrDI	GCAATG	1 cut(s)	2059
BsrFI	RCCGGY	2 cut(s)	8, 44
BsrI	ACTGG	3 cut(s)	697, 948, 1932
BssAI	RCCGGY	2 cut(s)	8, 44
BssECI	CCNNGG	8 cut(s)	57, 82, 192, 674, 849, 923, 1278, 1694
BssHII	GCGCGC	1 cut(s)	1837
BssMI	GATC	7 cut(s)	469, 601, 763, 767, 1039, 1528, 1558
BssNAI	GTATAC	1 cut(s)	735
BssSI	CACGAG	1 cut(s)	272
BssT1I	CCWWGG	4 cut(s)	82, 674, 923, 1278
Bst1107I	GTATAC	1 cut(s)	735
Bst2BI	CACGAG	1 cut(s)	272
Bst2UI	CCWGG	6 cut(s)	193, 645, 1085, 1322, 1653, 1673
Bst4CI	ACNGT	2 cut(s)	884, 1190
Bst6I	CTCTTC	2 cut(s)	63, 1485
BstAFI	CTTAAG	1 cut(s)	1196
BstBAI	YACGTR	1 cut(s)	1262
BstC8I	GCNNGC	9 cut(s)	46, 98, 149, 356, 393, 1098, 1839, 1862, 1923
BstDEI	CTNAG	5 cut(s)	248, 550, 583, 963, 1739
BstDSI	CCRYGG	1 cut(s)	849
BstF5I	GGATG	6 cut(s)	388, 837, 938, 1311, 1517, 1936
BstFNI	CGCG	3 cut(s)	14, 525, 1839
BstHHI	GCGC	3 cut(s)	14, 1839, 1841
BstKTI	GATC	7 cut(s)	472, 604, 766, 770, 1042, 1531, 1561
BstMAI	GTCTC	7 cut(s)	112, 269, 662, 899, 924, 971, 1752
BstMBI	GATC	7 cut(s)	469, 601, 763, 767, 1039, 1528, 1558
BstMWI	GCNNNNNNNGC	9 cut(s)	50, 93, 392, 632, 1013, 1022, 1028, 1034, 1280
BstNI	CCWGG	6 cut(s)	193, 645, 1085, 1322, 1653, 1673
BstNSI	RCATGY	1 cut(s)	1990
BstSCI	CCNGG	8 cut(s)	191, 432, 643, 1083, 1320, 1651, 1671, 1694
BstSFI	CTRYAG	1 cut(s)	1026
BstSLI	GKGCMC	1 cut(s)	1927
BstUI	CGCG	3 cut(s)	14, 525, 1839
BstV2I	GAAGAC	1 cut(s)	157
BstZ17I	GTATAC	1 cut(s)	735
Bsu15I	ATCGAT	1 cut(s)	766
Bsu36I	CCTNAGG	1 cut(s)	963
BsuRI	GGCC	4 cut(s)	96, 511, 1320, 1699
BsuTUI	ATCGAT	1 cut(s)	766
BtgI	CCRYGG	1 cut(s)	849
BtrI	CACGTC	1 cut(s)	163
BtsCI	GGATG	6 cut(s)	388, 837, 938, 1311, 1517, 1936
BtsIMutI	CAGTG	6 cut(s)	558, 955, 1609, 1645, 1925, 2081
Cac8I	GCNNGC	9 cut(s)	46, 98, 149, 356, 393, 1098, 1839, 1862, 1923
CaiI	CAGNNNCTG	2 cut(s)	397, 1007
CciI	TCATGA	2 cut(s)	1156, 1374
CfoI	GCGC	3 cut(s)	14, 1839, 1841
Cfr10I	RCCGGY	2 cut(s)	8, 44
Cfr13I	GGNCC	5 cut(s)	6, 196, 344, 641, 1052
ClaI	ATCGAT	1 cut(s)	766
CseI	GACGC	2 cut(s)	3, 34
Csp6I	GTAC	4 cut(s)	73, 310, 430, 1186
CspCI	CAANNNNNGTGG	4 cut(s)	831, 866, 1621, 1656
CviQI	GTAC	4 cut(s)	73, 310, 430, 1186
DdeI	CTNAG	5 cut(s)	248, 550, 583, 963, 1739
DpnI	GATC	7 cut(s)	471, 603, 765, 769, 1041, 1530, 1560
DpnII	GATC	7 cut(s)	469, 601, 763, 767, 1039, 1528, 1558
DrdI	GACNNNNNNGTC	3 cut(s)	13, 676, 1614
DseDI	GACNNNNNNGTC	3 cut(s)	13, 676, 1614
EaeI	YGGCCR	3 cut(s)	94, 1318, 1697
Eam1104I	CTCTTC	2 cut(s)	63, 1485
EarI	CTCTTC	2 cut(s)	63, 1485
EciI	GGCGGA	1 cut(s)	464
Ecl136II	GAGCTC	2 cut(s)	151, 247
Eco130I	CCWWGG	4 cut(s)	82, 674, 923, 1278
Eco24I	GRGCYC	2 cut(s)	153, 249
Eco31I	GGTCTC	3 cut(s)	899, 924, 1752
Eco47I	GGWCC	5 cut(s)	6, 196, 344, 641, 1052
Eco53kI	GAGCTC	2 cut(s)	151, 247
Eco57I	CTGAAG	3 cut(s)	621, 1266, 1407
Eco81I	CCTNAGG	1 cut(s)	963
Eco88I	CYCGRG	3 cut(s)	56, 425, 1101
EcoICRI	GAGCTC	2 cut(s)	151, 247
EcoO109I	RGGNCCY	1 cut(s)	196
EcoRII	CCWGG	6 cut(s)	191, 643, 1083, 1320, 1651, 1671
EcoT14I	CCWWGG	4 cut(s)	82, 674, 923, 1278
EcoT38I	GRGCYC	2 cut(s)	153, 249
ErhI	CCWWGG	4 cut(s)	82, 674, 923, 1278
Esp3I	CGTCTC	1 cut(s)	112
FalI	AAGNNNNNCTT	4 cut(s)	1391, 1423, 1518, 1550
FaqI	GGGAC	4 cut(s)	19, 161, 209, 1219
FbaI	TGATCA	1 cut(s)	1039
FblI	GTMKAC	1 cut(s)	734
FokI	GGATG	6 cut(s)	395, 844, 925, 1318, 1524, 1943
FriOI	GRGCYC	2 cut(s)	153, 249
FspBI	CTAG	4 cut(s)	387, 480, 924, 1857
GlaI	GCGC	3 cut(s)	13, 1838, 1840
GsuI	CTGGAG	4 cut(s)	931, 1032, 1886, 1965
HaeIII	GGCC	4 cut(s)	96, 511, 1320, 1699
HapII	CCGG	8 cut(s)	9, 45, 433, 508, 557, 1562, 1696, 1779
HgaI	GACGC	2 cut(s)	3, 34
HhaI	GCGC	3 cut(s)	14, 1839, 1841
Hin6I	GCGC	3 cut(s)	12, 1837, 1839
HinP1I	GCGC	3 cut(s)	12, 1837, 1839
HincII	GTYRAC	1 cut(s)	1807
HindII	GTYRAC	1 cut(s)	1807
HinfI	GANTC	8 cut(s)	227, 268, 277, 349, 502, 670, 803, 839
HpaI	GTTAAC	1 cut(s)	1807
HpaII	CCGG	8 cut(s)	9, 45, 433, 508, 557, 1562, 1696, 1779
HphI	GGTGA	3 cut(s)	581, 1687, 1733
Hpy166II	GTNNAC	6 cut(s)	735, 1607, 1630, 1807, 1925, 2081
Hpy8I	GTNNAC	6 cut(s)	735, 1607, 1630, 1807, 1925, 2081
Hpy99I	CGWCG	2 cut(s)	188, 1194
HpyAV	CCTTC	9 cut(s)	522, 639, 748, 967, 1241, 1307, 1382, 1565, 2069
HpyCH4III	ACNGT	2 cut(s)	884, 1190
HpyCH4IV	ACGT	5 cut(s)	105, 162, 1261, 1456, 1964
HpyF10VI	GCNNNNNNNGC	9 cut(s)	50, 93, 392, 632, 1013, 1022, 1028, 1034, 1280
HpyF3I	CTNAG	5 cut(s)	248, 550, 583, 963, 1739
HpySE526I	ACGT	5 cut(s)	105, 162, 1261, 1456, 1964
HspAI	GCGC	3 cut(s)	12, 1837, 1839
KflI	GGGWCCC	1 cut(s)	196
KroI	GCCGGC	1 cut(s)	44
KroNI	GCCGGC	1 cut(s)	46
Ksp22I	TGATCA	1 cut(s)	1039
KspAI	GTTAAC	1 cut(s)	1807
Kzo9I	GATC	7 cut(s)	469, 601, 763, 767, 1039, 1528, 1558
LguI	GCTCTTC	1 cut(s)	1485
LweI	GCATC	5 cut(s)	373, 1296, 1327, 1502, 1765
MaeI	CTAG	4 cut(s)	387, 480, 924, 1857
MaeII	ACGT	5 cut(s)	105, 162, 1261, 1456, 1964
MaeIII	GTNAC	1 cut(s)	1262
MalI	GATC	7 cut(s)	471, 603, 765, 769, 1041, 1530, 1560
MboI	GATC	7 cut(s)	469, 601, 763, 767, 1039, 1528, 1558
MfeI	CAATTG	1 cut(s)	1077
MhlI	GDGCHC	4 cut(s)	153, 249, 426, 1927
MlsI	TGGCCA	1 cut(s)	1320
MluNI	TGGCCA	1 cut(s)	1320
MlyI	GAGTC	2 cut(s)	271, 664
MmeI	TCCRAC	2 cut(s)	464, 1159
Mox20I	TGGCCA	1 cut(s)	1320
MreI	CGCCGGCG	1 cut(s)	44
MroNI	GCCGGC	1 cut(s)	44
MroXI	GAANNNNTTC	1 cut(s)	859
MscI	TGGCCA	1 cut(s)	1320
MseI	TTAA	6 cut(s)	444, 933, 1197, 1461, 1806, 2095
MslI	CAYNNNNRTG	3 cut(s)	236, 1173, 1379
Msp20I	TGGCCA	1 cut(s)	1320
MspA1I	CMGCKG	1 cut(s)	1025
MspCI	CTTAAG	1 cut(s)	1196
MspI	CCGG	8 cut(s)	9, 45, 433, 508, 557, 1562, 1696, 1779
MspR9I	CCNGG	8 cut(s)	193, 434, 645, 1085, 1322, 1653, 1673, 1696
MunI	CAATTG	1 cut(s)	1077
Mva1269I	GAATGC	2 cut(s)	528, 953
MvaI	CCWGG	6 cut(s)	193, 645, 1085, 1322, 1653, 1673
MvnI	CGCG	3 cut(s)	14, 525, 1839
MwoI	GCNNNNNNNGC	9 cut(s)	50, 93, 392, 632, 1013, 1022, 1028, 1034, 1280
NaeI	GCCGGC	1 cut(s)	46
NciI	CCSGG	2 cut(s)	434, 1696
NdeII	GATC	7 cut(s)	469, 601, 763, 767, 1039, 1528, 1558
NgoMIV	GCCGGC	1 cut(s)	44
NlaIV	GGNNCC	8 cut(s)	7, 172, 190, 197, 198, 345, 370, 580
NspI	RCATGY	1 cut(s)	1990
PaeR7I	CTCGAG	2 cut(s)	425, 1101
PagI	TCATGA	2 cut(s)	1156, 1374
PauI	GCGCGC	1 cut(s)	1837
PciSI	GCTCTTC	1 cut(s)	1485
PctI	GAATGC	2 cut(s)	528, 953
PdiI	GCCGGC	1 cut(s)	46
PdmI	GAANNNNTTC	1 cut(s)	859
PfeI	GAWTC	6 cut(s)	227, 268, 349, 502, 803, 839
PflFI	GACNNNGTC	1 cut(s)	1598
PfoI	TCCNGGA	1 cut(s)	1651
PleI	GAGTC	2 cut(s)	271, 664
PpsI	GAGTC	2 cut(s)	271, 664
Ppu21I	YACGTR	1 cut(s)	1262
PpuMI	RGGWCCY	1 cut(s)	196
Psp124BI	GAGCTC	2 cut(s)	153, 249
Psp5II	RGGWCCY	1 cut(s)	196
Psp6I	CCWGG	6 cut(s)	191, 643, 1083, 1320, 1651, 1671
PspGI	CCWGG	6 cut(s)	191, 643, 1083, 1320, 1651, 1671
PspN4I	GGNNCC	8 cut(s)	7, 172, 190, 197, 198, 345, 370, 580
PspPI	GGNCC	5 cut(s)	6, 196, 344, 641, 1052
PspPPI	RGGWCCY	1 cut(s)	196
PspXI	VCTCGAGB	2 cut(s)	425, 1101
PstI	CTGCAG	1 cut(s)	1030
PstNI	CAGNNNCTG	2 cut(s)	397, 1007
PsyI	GACNNNGTC	1 cut(s)	1598
PteI	GCGCGC	1 cut(s)	1837
PvuII	CAGCTG	1 cut(s)	1025
RsaI	GTAC	4 cut(s)	74, 311, 431, 1187
RsaNI	GTAC	4 cut(s)	73, 310, 430, 1186
RseI	CAYNNNNRTG	3 cut(s)	236, 1173, 1379
SacI	GAGCTC	2 cut(s)	153, 249
SapI	GCTCTTC	1 cut(s)	1485
SaqAI	TTAA	6 cut(s)	444, 933, 1197, 1461, 1806, 2095
Sau3AI	GATC	7 cut(s)	469, 601, 763, 767, 1039, 1528, 1558
Sau96I	GGNCC	5 cut(s)	6, 196, 344, 641, 1052
SchI	GAGTC	2 cut(s)	271, 664
ScrFI	CCNGG	8 cut(s)	193, 434, 645, 1085, 1322, 1653, 1673, 1696
SduI	GDGCHC	4 cut(s)	153, 249, 426, 1927
SfaNI	GCATC	5 cut(s)	373, 1296, 1327, 1502, 1765
SfcI	CTRYAG	1 cut(s)	1026
Sfr274I	CTCGAG	2 cut(s)	425, 1101
SgrAI	CRCCGGYG	1 cut(s)	44
SinI	GGWCC	5 cut(s)	6, 196, 344, 641, 1052
SlaI	CTCGAG	2 cut(s)	425, 1101
SmiMI	CAYNNNNRTG	3 cut(s)	236, 1173, 1379
SmlI	CTYRAG	4 cut(s)	137, 425, 1101, 1196
SmoI	CTYRAG	4 cut(s)	137, 425, 1101, 1196
SspI	AATATT	1 cut(s)	1332
SspMI	CTAG	4 cut(s)	387, 480, 924, 1857
SstI	GAGCTC	2 cut(s)	153, 249
StyD4I	CCNGG	8 cut(s)	191, 432, 643, 1083, 1320, 1651, 1671, 1694
StyI	CCWWGG	4 cut(s)	82, 674, 923, 1278
TaaI	ACNGT	2 cut(s)	884, 1190
TaiI	ACGT	5 cut(s)	108, 165, 1264, 1459, 1967
TaqI	TCGA	7 cut(s)	78, 426, 606, 766, 1102, 1144, 1531
TatI	WGTACW	1 cut(s)	309
TauI	GCSGC	4 cut(s)	90, 93, 96, 528
TfiI	GAWTC	6 cut(s)	227, 268, 349, 502, 803, 839
Tru1I	TTAA	6 cut(s)	444, 933, 1197, 1461, 1806, 2095
Tru9I	TTAA	6 cut(s)	444, 933, 1197, 1461, 1806, 2095
TscAI	CASTG	6 cut(s)	558, 955, 1609, 1645, 1932, 2088
TspDTI	ATGAA	4 cut(s)	795, 1391, 1446, 1560
TspGWI	ACGGA	3 cut(s)	163, 838, 1375
TspRI	CASTG	6 cut(s)	558, 955, 1609, 1645, 1932, 2088
Tth111I	GACNNNGTC	1 cut(s)	1598
Vha464I	CTTAAG	1 cut(s)	1196
VneI	GTGCAC	1 cut(s)	1923
VpaK11BI	GGWCC	5 cut(s)	6, 196, 344, 641, 1052
XapI	RAATTY	1 cut(s)	1464
XceI	RCATGY	1 cut(s)	1990
XhoI	CTCGAG	2 cut(s)	425, 1101
XmaJI	CCTAGG	1 cut(s)	923
XmiI	GTMKAC	1 cut(s)	734
XmnI	GAANNNNTTC	1 cut(s)	859
XspI	CTAG	4 cut(s)	387, 480, 924, 1857

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.