Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0008775

Physical Location & Seq

Genomic Coordinates Reverse (-)

13755533 .. 13763417

Gene Structure 7885 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00010800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2208 bp

ATGGGGACCGGCGCCTCCAAGCGGACGCAGGACGGCTCTCACGCCGGCGAAGCCCCCGAGGAGGGGGAAGAGTACCTTGACCAAGGCGGCGGCGGCCAGCTCTACGTCTCCTTGAAGATGGAGAACAATTACAAGCTCAAGAAAGGCGAGCTCCTCCCTCACGTCTTCGGCTCCGTCCCTCTCGTCGGCTCCTGGGACCCCAACAAAGCCCTTTCTATGGAGCGTGAATCCACCTCCATGTGGGAGCTCAGCTTCGTTGTTCCTCCGAATCACGAGACTCTGGATTTCAAGTTCCTGTTGAAGTCCAAGTACAACACCAATGCGGTTTATGTGGTTGAGGAGGGTCCGAATCGCCAGCTCATAGGGGGAGCCTTGCAAGGGGATGCTAGGCAGGCTCTGTTTAGGATTAGTAGTGATGAGGTGCTCGAGTACCGGGTGTTTATTAAGGCGGATAGGGTATCGCCTTTTGATCTTGCAGCTAGTTGGAGGGCTTATCAGGAGAATCTCCGGCCTTCTGCGGTTCGGGGCATTCCTGATGTCAGTATTGGCACAGTGCCGGAAATTGGTGGTGAGAACGGCTCTTCAGCGAGTTTGGAGCTTGATCTCGAACATTATGTTGTTCCAGCTCCTTCGGCTTCAGGTCCGGTTTATGCAGCTAACAATACAGAGACTCCAAGTCCACCTAATACAACATTTATACAGGAGATGGAGGTTGTTATTCCAGATTCATCAAAAATGTATTCTTCCTCTGGGATGGTTGAATCAAAGTCCGTGGGAACATTTTCGCCTTTCCAAAAGCAAGACAATCAGAGGGGTCTCTTTGTGGATAGAGGTGTTGGGTCTCCTAGGCTCGTTAAATCATCCAGCTCCAGTGCATTCTCTCCTGAGGTCAGGAAGGAGACAGAAACAAAGAACTCAATGCCAGAAGCTGCTGGAGCTGTTGCAGCTGCAGCCATAGCTGATCAAATGCTCGGACCAAAGGAAGATGTGCATTTGGCAATTGTCCTGGTTGGTTTGCCAGCTCGAGGAAAAACTTTTACGGCAGCTAAACTTACAAGGTATCTTCGATGGTTGGGTCATGATACCAAACACTTCAATGTTGGAAAGTACCGCCGTCTTAAGCATGGGACTAATCAGACTGCTGATTTTTTCCGAGCTGACAACCCTGAAGGCATGGAGGCACGGAACGAGGTAGCAGCCTTGGCATTTGATGACATGGTTTCTTGGATGCAAGAAGGTGGCCAGGTAGGAATATTTGATGCCACAAACAGCACAAAGAAGCGGAGGAATATGCTCATGAAAATGGCTGAAGGAAAATGCAAGATTATCTTTCTGGAAACAATATGCAATGATGAACGAATTATAGAAAGAAATATACGTCTTAAAATTCAACAAAGTCCTGACTATGCAGAAGAGCCAGATTTTGAGGCTGGATGCAAGGACTTCAAAGATCGACTTTCTTATTATGAAAAAGTTTATGATCCGGTAGAAGAAGGGTCGTATATCAAAATGATTGACATGGTCAGTGGACATGGAGGTCAAATACAAGTGAACAATATCAGTGGGTATCTTCCTGGACGAATTGTTTTTTTCCTGGTGAATACACATCTCACACCCCGGCCAATCTTACTTACAAGGCATGGTGAGAGCATGGATAATCTCAGAGGAAGAATAGGTGGAGACCATGCTTTGAGTGATGCCGGAGAACTTTATGCCAAGAAACTTGGTAACTTTGTTGAAAAGCGACTGAAATCAGAGCGAGCTGCTTCGATTTGGACTAGCACGCTGGAGCGAACAATTCTGACTGCAGCTCCCATTTCGGGATTTCCCAAGATACAATGGCGTGCACTGGATGAGATATATGCTGGAGTGTGTGATGGAATGACGTATGAGGAGATAAAGAAAAACATGCCAGAGGAATACGAGGCGCGTAAAAAAGATAAGCTGAGGTATCGGTATCCTCGTGGAGAATCTTATTTAGATGTTATCCAAAGGCTAGAGCCTGTAATCATTGAACTCGAACGACAACGTGCACCTGTTGTGGTGATATCTCACCAGGCTGTTTTGAGAGCATTATATGCTTACTTTGCTGATAGGCCGCTGAAAGAAATTCCACATATTGAGATCGTGACCTTTCACCTTATTAGACTTGCAAAGCTTTGCAGAGGTGGGGGTACTGGTCTAACTATAAAAGTTGAAGAATCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005975 GO:0005996 GO:0006000 GO:0006002 GO:0006003 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0019318 GO:0019637 GO:0043609 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0065007 GO:0071704 GO:0071944 GO:1901135

KEGG Pathways

Metabolic & Signaling

ko00051 ko04066 ko04152 map00051 map04066 map04152

Pfam Domains

Protein Families

6PF2K CBM_20 His_Phos_1

Protein Analysis

735

Amino Acids

81.87

Weight (kDa)

6.27

Isoelectric Point (pI)

41.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CBM_20	PF00686	55 - 120	1.5e-06	Starch binding domain
6PF2K	PF01591	323 - 539	4.8e-83	6-phosphofructo-2-kinase
AAA_33	PF13671	334 - 459	8.8e-06	AAA domain
His_Phos_1	PF00300	542 - 715	1.8e-36	Histidine phosphatase superfamily (branch 1)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008775)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07110
fragaria_vesca	FvH4_3g39080 FvH4_3g39080 FvH4_3g39080 FvH4_3g39080
malus_domestica	MD03G1064800.v1.1 MD11G1068800.v1.1
prunus_persica	Prupe.6G053800_v2.0.a1 Prupe.6G053800_v2.0.a1 Prupe.6G053800_v2.0.a1
pyrus_communis	pycom03g05190 pycom11g05730
rosa_chinensis	RchiOBHm_Chr5g0070401
rosa_laevigata	RLG00000036130
rosa_multiflora	Rmu_sc0007961.1_g000013
rosa_roxburghii	Rroxscaffold_1G00010800
rosa_rugosa	Rorug05G0405600 Rorug05G0405700.1
rosa_samantha	Rh5AG461100 Rh5BG479400 Rh5CG503600 Rh5DG491400
rosa_wichuraiana	Rw5G042980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1536
AccB1I	GGYRCC	1 cut(s)	11
AccII	CGCG	1 cut(s)	1930
AclWI	GGATC	1 cut(s)	1475
AcoI	YGGCCR	3 cut(s)	94, 1240, 1619
AcsI	RAATTY	2 cut(s)	1386, 2109
AcuI	CTGAAG	4 cut(s)	567, 621, 1188, 1329
AcyI	GRCGYC	1 cut(s)	12
AfaI	GTAC	5 cut(s)	74, 311, 431, 1109, 2176
AflII	CTTAAG	1 cut(s)	1118
AhdI	GACNNNNNGTC	1 cut(s)	675
AjiI	CACGTC	1 cut(s)	163
AjnI	CCWGG	6 cut(s)	191, 1005, 1242, 1573, 1593, 2055
AloI	GAACNNNNNNTCC	2 cut(s)	275, 307
Alw21I	GWGCWC	5 cut(s)	153, 249, 426, 1849, 2035
Alw26I	GTCTC	7 cut(s)	112, 269, 662, 821, 846, 893, 1674
Alw44I	GTGCAC	2 cut(s)	1845, 2031
AlwI	GGATC	1 cut(s)	1475
AlwNI	CAGNNNCTG	2 cut(s)	397, 929
Ama87I	CYCGRG	3 cut(s)	56, 425, 1023
AoxI	GGCC	5 cut(s)	94, 509, 1240, 1619, 2096
ApaLI	GTGCAC	2 cut(s)	1845, 2031
ApoI	RAATTY	2 cut(s)	1386, 2109
Asp700I	GAANNNNTTC	1 cut(s)	781
AspA2I	CCTAGG	1 cut(s)	845
AspLEI	GCGC	2 cut(s)	14, 1930
AspS9I	GGNCC	5 cut(s)	6, 196, 344, 641, 974
AsuC2I	CCSGG	2 cut(s)	434, 1618
AsuHPI	GGTGA	6 cut(s)	581, 1609, 1655, 2045, 2056, 2129
AvaI	CYCGRG	3 cut(s)	56, 425, 1023
AvaII	GGWCC	5 cut(s)	6, 196, 344, 641, 974
AvrII	CCTAGG	1 cut(s)	845
AxyI	CCTNAGG	1 cut(s)	885
BaeGI	GKGCMC	2 cut(s)	1849, 2035
BalI	TGGCCA	1 cut(s)	1242
BanI	GGYRCC	1 cut(s)	11
BanII	GRGCYC	2 cut(s)	153, 249
BarI	GAAGNNNNNNTAC	2 cut(s)	293, 325
BauI	CACGAG	2 cut(s)	272, 1962
BbsI	GAAGAC	1 cut(s)	157
Bbv12I	GWGCWC	5 cut(s)	153, 249, 426, 1849, 2035
BbvCI	CCTCAGC	1 cut(s)	1946
BccI	CCATC	5 cut(s)	112, 700, 748, 1062, 1871
BceAI	ACGGC	4 cut(s)	49, 592, 1056, 1098
BciT130I	CCWGG	6 cut(s)	193, 1007, 1244, 1575, 1595, 2057
BciVI	GTATCC	1 cut(s)	1968
BclI	TGATCA	1 cut(s)	961
BcnI	CCSGG	2 cut(s)	434, 1618
BcoDI	GTCTC	7 cut(s)	112, 269, 662, 821, 846, 893, 1674
BfaI	CTAG	5 cut(s)	387, 480, 846, 1779, 1997
BfmI	CTRYAG	2 cut(s)	948, 1806
BfoI	RGCGCY	1 cut(s)	15
BfrI	CTTAAG	1 cut(s)	1118
BfuI	GTATCC	1 cut(s)	1968
BlnI	CCTAGG	1 cut(s)	845
BlpI	GCTNAGC	1 cut(s)	248
Bme1390I	CCNGG	8 cut(s)	193, 434, 1007, 1244, 1575, 1595, 1618, 2057
Bme18I	GGWCC	5 cut(s)	6, 196, 344, 641, 974
BmeRI	GACNNNNNGTC	1 cut(s)	675
BmeT110I	CYCGRG	3 cut(s)	56, 425, 1023
BmgBI	CACGTC	1 cut(s)	163
BmgT120I	GGNCC	5 cut(s)	6, 196, 344, 641, 974
BmiI	GGNNCC	8 cut(s)	7, 13, 172, 190, 197, 198, 345, 370
BmrFI	CCNGG	8 cut(s)	193, 434, 1007, 1244, 1575, 1595, 1618, 2057
BmsI	GCATC	5 cut(s)	373, 1218, 1249, 1424, 1687
BpiI	GAAGAC	1 cut(s)	157
BplI	GAGNNNNNCTC	2 cut(s)	563, 595
BpmI	CTGGAG	4 cut(s)	853, 954, 1808, 1887
Bpu10I	CCTNAGC	1 cut(s)	1946
Bpu1102I	GCTNAGC	1 cut(s)	248
BpuEI	CTTGAG	1 cut(s)	122
BpuMI	CCSGG	2 cut(s)	434, 1618
BsaHI	GRCGYC	1 cut(s)	12
BsaI	GGTCTC	3 cut(s)	821, 846, 1674
BsaJI	CCNNGG	7 cut(s)	57, 82, 192, 771, 845, 1200, 1616
BsaWI	WCCGGW	2 cut(s)	643, 1483
BsaXI	ACNNNNNCTCC	4 cut(s)	655, 685, 1795, 1825
Bse118I	RCCGGY	2 cut(s)	8, 44
Bse1I	ACTGG	3 cut(s)	870, 1854, 2182
Bse21I	CCTNAGG	1 cut(s)	885
Bse3DI	GCAATG	1 cut(s)	1354
BseBI	CCWGG	6 cut(s)	193, 1007, 1244, 1575, 1595, 2057
BseDI	CCNNGG	7 cut(s)	57, 82, 192, 771, 845, 1200, 1616
BseGI	GGATG	6 cut(s)	388, 759, 860, 1233, 1439, 1858
BseMI	GCAATG	1 cut(s)	1354
BseMII	CTCAG	4 cut(s)	262, 876, 1675, 1937
BseNI	ACTGG	3 cut(s)	870, 1854, 2182
BseRI	GAGGAG	4 cut(s)	74, 143, 353, 1907
BseSI	GKGCMC	2 cut(s)	1849, 2035
Bsh1236I	CGCG	1 cut(s)	1930
BshFI	GGCC	5 cut(s)	96, 511, 1242, 1621, 2098
BshNI	GGYRCC	1 cut(s)	11
BsiHKAI	GWGCWC	5 cut(s)	153, 249, 426, 1849, 2035
BsiHKCI	CYCGRG	3 cut(s)	56, 425, 1023
BsiSI	CCGG	9 cut(s)	9, 45, 433, 508, 557, 644, 1484, 1618, 1701
BslFI	GGGAC	4 cut(s)	19, 161, 209, 1141
BsmAI	GTCTC	7 cut(s)	112, 269, 662, 821, 846, 893, 1674
BsmBI	CGTCTC	1 cut(s)	112
BsmFI	GGGAC	4 cut(s)	19, 161, 209, 1141
BsmI	GAATGC	2 cut(s)	528, 875
BsnI	GGCC	5 cut(s)	96, 511, 1242, 1621, 2098
Bso31I	GGTCTC	3 cut(s)	821, 846, 1674
BsoBI	CYCGRG	3 cut(s)	56, 425, 1023
Bsp1286I	GDGCHC	5 cut(s)	153, 249, 426, 1849, 2035
Bsp143I	GATC	6 cut(s)	469, 601, 961, 1450, 1480, 2124
Bsp1720I	GCTNAGC	1 cut(s)	248
BspANI	GGCC	5 cut(s)	96, 511, 1242, 1621, 2098
BspCNI	CTCAG	4 cut(s)	261, 877, 1674, 1938
BspFNI	CGCG	1 cut(s)	1930
BspHI	TCATGA	2 cut(s)	1078, 1296
BspLI	GGNNCC	8 cut(s)	7, 13, 172, 190, 197, 198, 345, 370
BspMAI	CTGCAG	2 cut(s)	952, 1810
BspPI	GGATC	1 cut(s)	1475
BspQI	GCTCTTC	2 cut(s)	586, 1407
BspT107I	GGYRCC	1 cut(s)	11
BspTI	CTTAAG	1 cut(s)	1118
BspTNI	GGTCTC	3 cut(s)	821, 846, 1674
BsrDI	GCAATG	1 cut(s)	1354
BsrFI	RCCGGY	2 cut(s)	8, 44
BsrI	ACTGG	3 cut(s)	870, 1854, 2182
BssAI	RCCGGY	2 cut(s)	8, 44
BssECI	CCNNGG	7 cut(s)	57, 82, 192, 771, 845, 1200, 1616
BssMI	GATC	6 cut(s)	469, 601, 961, 1450, 1480, 2124
BssNI	GRCGYC	1 cut(s)	12
BssSI	CACGAG	2 cut(s)	272, 1962
BssT1I	CCWWGG	3 cut(s)	82, 845, 1200
Bst2BI	CACGAG	2 cut(s)	272, 1962
Bst2UI	CCWGG	6 cut(s)	193, 1007, 1244, 1575, 1595, 2057
Bst4CI	ACNGT	1 cut(s)	553
Bst6I	CTCTTC	3 cut(s)	63, 586, 1407
BstACI	GRCGYC	1 cut(s)	12
BstAFI	CTTAAG	1 cut(s)	1118
BstAPI	GCANNNNNTGC	1 cut(s)	2078
BstC8I	GCNNGC	9 cut(s)	46, 98, 149, 356, 393, 1020, 1761, 1784, 1845
BstDEI	CTNAG	5 cut(s)	248, 885, 1661, 1946, 2205
BstDSI	CCRYGG	1 cut(s)	771
BstF5I	GGATG	6 cut(s)	388, 759, 860, 1233, 1439, 1858
BstFNI	CGCG	1 cut(s)	1930
BstH2I	RGCGCY	1 cut(s)	15
BstHHI	GCGC	2 cut(s)	14, 1930
BstKTI	GATC	6 cut(s)	472, 604, 964, 1453, 1483, 2127
BstMAI	GTCTC	7 cut(s)	112, 269, 662, 821, 846, 893, 1674
BstMBI	GATC	6 cut(s)	469, 601, 961, 1450, 1480, 2124
BstNI	CCWGG	6 cut(s)	193, 1007, 1244, 1575, 1595, 2057
BstNSI	RCATGY	1 cut(s)	1912
BstSCI	CCNGG	8 cut(s)	191, 432, 1005, 1242, 1573, 1593, 1616, 2055
BstSFI	CTRYAG	2 cut(s)	948, 1806
BstSLI	GKGCMC	2 cut(s)	1849, 2035
BstUI	CGCG	1 cut(s)	1930
BstV2I	GAAGAC	1 cut(s)	157
Bsu36I	CCTNAGG	1 cut(s)	885
BsuI	GTATCC	1 cut(s)	1968
BsuRI	GGCC	5 cut(s)	96, 511, 1242, 1621, 2098
BtgI	CCRYGG	1 cut(s)	771
BtrI	CACGTC	1 cut(s)	163
BtsCI	GGATG	6 cut(s)	388, 759, 860, 1233, 1439, 1858
BtsIMutI	CAGTG	5 cut(s)	558, 877, 1531, 1567, 1847
Cac8I	GCNNGC	9 cut(s)	46, 98, 149, 356, 393, 1020, 1761, 1784, 1845
CaiI	CAGNNNCTG	2 cut(s)	397, 929
CciI	TCATGA	2 cut(s)	1078, 1296
CfoI	GCGC	2 cut(s)	14, 1930
Cfr10I	RCCGGY	2 cut(s)	8, 44
Cfr13I	GGNCC	5 cut(s)	6, 196, 344, 641, 974
CseI	GACGC	1 cut(s)	34
Csp6I	GTAC	5 cut(s)	73, 310, 430, 1108, 2175
CspCI	CAANNNNNGTGG	4 cut(s)	753, 788, 1543, 1578
CviQI	GTAC	5 cut(s)	73, 310, 430, 1108, 2175
DdeI	CTNAG	5 cut(s)	248, 885, 1661, 1946, 2205
DinI	GGCGCC	1 cut(s)	13
DpnI	GATC	6 cut(s)	471, 603, 963, 1452, 1482, 2126
DpnII	GATC	6 cut(s)	469, 601, 961, 1450, 1480, 2124
DrdI	GACNNNNNNGTC	1 cut(s)	1536
DriI	GACNNNNNGTC	1 cut(s)	675
DseDI	GACNNNNNNGTC	1 cut(s)	1536
EaeI	YGGCCR	3 cut(s)	94, 1240, 1619
Eam1104I	CTCTTC	3 cut(s)	63, 586, 1407
Eam1105I	GACNNNNNGTC	1 cut(s)	675
EarI	CTCTTC	3 cut(s)	63, 586, 1407
EciI	GGCGGA	1 cut(s)	464
Ecl136II	GAGCTC	2 cut(s)	151, 247
Eco130I	CCWWGG	3 cut(s)	82, 845, 1200
Eco24I	GRGCYC	2 cut(s)	153, 249
Eco31I	GGTCTC	3 cut(s)	821, 846, 1674
Eco32I	GATATC	1 cut(s)	2049
Eco47I	GGWCC	5 cut(s)	6, 196, 344, 641, 974
Eco53kI	GAGCTC	2 cut(s)	151, 247
Eco57I	CTGAAG	4 cut(s)	567, 621, 1188, 1329
Eco81I	CCTNAGG	1 cut(s)	885
Eco88I	CYCGRG	3 cut(s)	56, 425, 1023
EcoICRI	GAGCTC	2 cut(s)	151, 247
EcoO109I	RGGNCCY	1 cut(s)	196
EcoRII	CCWGG	6 cut(s)	191, 1005, 1242, 1573, 1593, 2055
EcoRV	GATATC	1 cut(s)	2049
EcoT14I	CCWWGG	3 cut(s)	82, 845, 1200
EcoT38I	GRGCYC	2 cut(s)	153, 249
EgeI	GGCGCC	1 cut(s)	13
EheI	GGCGCC	1 cut(s)	13
ErhI	CCWWGG	3 cut(s)	82, 845, 1200
Esp3I	CGTCTC	1 cut(s)	112
FalI	AAGNNNNNCTT	6 cut(s)	60, 92, 1313, 1345, 1440, 1472
FaqI	GGGAC	4 cut(s)	19, 161, 209, 1141
FbaI	TGATCA	1 cut(s)	961
FokI	GGATG	6 cut(s)	395, 766, 847, 1240, 1446, 1865
FriOI	GRGCYC	2 cut(s)	153, 249
FspBI	CTAG	5 cut(s)	387, 480, 846, 1779, 1997
GlaI	GCGC	2 cut(s)	13, 1929
GsuI	CTGGAG	4 cut(s)	853, 954, 1808, 1887
HaeII	RGCGCY	1 cut(s)	15
HaeIII	GGCC	5 cut(s)	96, 511, 1242, 1621, 2098
HapII	CCGG	9 cut(s)	9, 45, 433, 508, 557, 644, 1484, 1618, 1701
HgaI	GACGC	1 cut(s)	34
HhaI	GCGC	2 cut(s)	14, 1930
Hin1I	GRCGYC	1 cut(s)	12
Hin6I	GCGC	2 cut(s)	12, 1928
HinP1I	GCGC	2 cut(s)	12, 1928
HindIII	AAGCTT	1 cut(s)	2156
HpaII	CCGG	9 cut(s)	9, 45, 433, 508, 557, 644, 1484, 1618, 1701
HphI	GGTGA	6 cut(s)	581, 1609, 1655, 2045, 2056, 2129
Hpy166II	GTNNAC	5 cut(s)	680, 1529, 1552, 1847, 2033
Hpy188I	TCNGA	9 cut(s)	267, 348, 810, 974, 1137, 1154, 1664, 1756, 1803
Hpy8I	GTNNAC	5 cut(s)	680, 1529, 1552, 1847, 2033
Hpy99I	CGWCG	1 cut(s)	188
HpyAV	CCTTC	7 cut(s)	522, 639, 889, 1163, 1229, 1304, 1487
HpyCH4III	ACNGT	1 cut(s)	553
HpyCH4IV	ACGT	5 cut(s)	105, 162, 1378, 1886, 2029
HpyF3I	CTNAG	5 cut(s)	248, 885, 1661, 1946, 2205
HpySE526I	ACGT	5 cut(s)	105, 162, 1378, 1886, 2029
Hsp92I	GRCGYC	1 cut(s)	12
HspAI	GCGC	2 cut(s)	12, 1928
KasI	GGCGCC	1 cut(s)	11
KflI	GGGWCCC	1 cut(s)	196
KroI	GCCGGC	1 cut(s)	44
KroNI	GCCGGC	1 cut(s)	46
Ksp22I	TGATCA	1 cut(s)	961
Kzo9I	GATC	6 cut(s)	469, 601, 961, 1450, 1480, 2124
LguI	GCTCTTC	2 cut(s)	586, 1407
LweI	GCATC	5 cut(s)	373, 1218, 1249, 1424, 1687
MaeI	CTAG	5 cut(s)	387, 480, 846, 1779, 1997
MaeII	ACGT	5 cut(s)	105, 162, 1378, 1886, 2029
MaeIII	GTNAC	2 cut(s)	1727, 2128
MalI	GATC	6 cut(s)	471, 603, 963, 1452, 1482, 2126
MboI	GATC	6 cut(s)	469, 601, 961, 1450, 1480, 2124
MfeI	CAATTG	1 cut(s)	999
MhlI	GDGCHC	5 cut(s)	153, 249, 426, 1849, 2035
MlsI	TGGCCA	1 cut(s)	1242
MluCI	AATT	8 cut(s)	127, 561, 999, 1359, 1386, 1581, 1797, 2109
MluNI	TGGCCA	1 cut(s)	1242
Mly113I	GGCGCC	1 cut(s)	12
MlyI	GAGTC	2 cut(s)	271, 664
MmeI	TCCRAC	2 cut(s)	464, 1081
Mox20I	TGGCCA	1 cut(s)	1242
MreI	CGCCGGCG	1 cut(s)	44
MroNI	GCCGGC	1 cut(s)	44
MroXI	GAANNNNTTC	1 cut(s)	781
MscI	TGGCCA	1 cut(s)	1242
MseI	TTAA	4 cut(s)	444, 855, 1119, 1383
MslI	CAYNNNNRTG	3 cut(s)	236, 1095, 1301
Msp20I	TGGCCA	1 cut(s)	1242
MspA1I	CMGCKG	2 cut(s)	947, 2101
MspCI	CTTAAG	1 cut(s)	1118
MspI	CCGG	9 cut(s)	9, 45, 433, 508, 557, 644, 1484, 1618, 1701
MspR9I	CCNGG	8 cut(s)	193, 434, 1007, 1244, 1575, 1595, 1618, 2057
MunI	CAATTG	1 cut(s)	999
Mva1269I	GAATGC	2 cut(s)	528, 875
MvaI	CCWGG	6 cut(s)	193, 1007, 1244, 1575, 1595, 2057
MvnI	CGCG	1 cut(s)	1930
NaeI	GCCGGC	1 cut(s)	46
NarI	GGCGCC	1 cut(s)	12
NciI	CCSGG	2 cut(s)	434, 1618
NdeII	GATC	6 cut(s)	469, 601, 961, 1450, 1480, 2124
NgoMIV	GCCGGC	1 cut(s)	44
NlaIV	GGNNCC	8 cut(s)	7, 13, 172, 190, 197, 198, 345, 370
NmuCI	GTSAC	1 cut(s)	2128
NspI	RCATGY	1 cut(s)	1912
PaeR7I	CTCGAG	2 cut(s)	425, 1023
PagI	TCATGA	2 cut(s)	1078, 1296
PciSI	GCTCTTC	2 cut(s)	586, 1407
PcsI	WCGNNNNNNNCGW	1 cut(s)	1960
PctI	GAATGC	2 cut(s)	528, 875
PdiI	GCCGGC	1 cut(s)	46
PdmI	GAANNNNTTC	1 cut(s)	781
PfeI	GAWTC	8 cut(s)	227, 268, 349, 502, 725, 761, 1970, 2201
PflFI	GACNNNGTC	1 cut(s)	1520
PfoI	TCCNGGA	1 cut(s)	1573
PleI	GAGTC	2 cut(s)	271, 664
PluTI	GGCGCC	1 cut(s)	15
PpsI	GAGTC	2 cut(s)	271, 664
PpuMI	RGGWCCY	1 cut(s)	196
Psp124BI	GAGCTC	2 cut(s)	153, 249
Psp5II	RGGWCCY	1 cut(s)	196
Psp6I	CCWGG	6 cut(s)	191, 1005, 1242, 1573, 1593, 2055
PspGI	CCWGG	6 cut(s)	191, 1005, 1242, 1573, 1593, 2055
PspN4I	GGNNCC	8 cut(s)	7, 13, 172, 190, 197, 198, 345, 370
PspPI	GGNCC	5 cut(s)	6, 196, 344, 641, 974
PspPPI	RGGWCCY	1 cut(s)	196
PspXI	VCTCGAGB	2 cut(s)	425, 1023
PstI	CTGCAG	2 cut(s)	952, 1810
PstNI	CAGNNNCTG	2 cut(s)	397, 929
PsyI	GACNNNGTC	1 cut(s)	1520
PvuII	CAGCTG	1 cut(s)	947
RsaI	GTAC	5 cut(s)	74, 311, 431, 1109, 2176
RsaNI	GTAC	5 cut(s)	73, 310, 430, 1108, 2175
RseI	CAYNNNNRTG	3 cut(s)	236, 1095, 1301
SacI	GAGCTC	2 cut(s)	153, 249
SapI	GCTCTTC	2 cut(s)	586, 1407
SaqAI	TTAA	4 cut(s)	444, 855, 1119, 1383
Sau3AI	GATC	6 cut(s)	469, 601, 961, 1450, 1480, 2124
Sau96I	GGNCC	5 cut(s)	6, 196, 344, 641, 974
SchI	GAGTC	2 cut(s)	271, 664
ScrFI	CCNGG	8 cut(s)	193, 434, 1007, 1244, 1575, 1595, 1618, 2057
SduI	GDGCHC	5 cut(s)	153, 249, 426, 1849, 2035
SfaNI	GCATC	5 cut(s)	373, 1218, 1249, 1424, 1687
SfcI	CTRYAG	2 cut(s)	948, 1806
SfoI	GGCGCC	1 cut(s)	13
Sfr274I	CTCGAG	2 cut(s)	425, 1023
SgrAI	CRCCGGYG	1 cut(s)	44
SinI	GGWCC	5 cut(s)	6, 196, 344, 641, 974
SlaI	CTCGAG	2 cut(s)	425, 1023
SmiMI	CAYNNNNRTG	3 cut(s)	236, 1095, 1301
SmlI	CTYRAG	4 cut(s)	137, 425, 1023, 1118
SmoI	CTYRAG	4 cut(s)	137, 425, 1023, 1118
Sse9I	AATT	8 cut(s)	127, 561, 999, 1359, 1386, 1581, 1797, 2109
SspDI	GGCGCC	1 cut(s)	11
SspI	AATATT	1 cut(s)	1254
SspMI	CTAG	5 cut(s)	387, 480, 846, 1779, 1997
SstI	GAGCTC	2 cut(s)	153, 249
StyD4I	CCNGG	8 cut(s)	191, 432, 1005, 1242, 1573, 1593, 1616, 2055
StyI	CCWWGG	3 cut(s)	82, 845, 1200
TaaI	ACNGT	1 cut(s)	553
TaiI	ACGT	5 cut(s)	108, 165, 1381, 1889, 2032
TaqI	TCGA	7 cut(s)	426, 606, 1024, 1066, 1453, 1769, 2019
TasI	AATT	8 cut(s)	127, 561, 999, 1359, 1386, 1581, 1797, 2109
TatI	WGTACW	1 cut(s)	309
TauI	GCSGC	4 cut(s)	90, 93, 96, 2101
TfiI	GAWTC	8 cut(s)	227, 268, 349, 502, 725, 761, 1970, 2201
Tru1I	TTAA	4 cut(s)	444, 855, 1119, 1383
Tru9I	TTAA	4 cut(s)	444, 855, 1119, 1383
TscAI	CASTG	5 cut(s)	558, 877, 1531, 1567, 1854
TseFI	GTSAC	1 cut(s)	2128
Tsp45I	GTSAC	1 cut(s)	2128
TspDTI	ATGAA	4 cut(s)	717, 1313, 1368, 1482
TspGWI	ACGGA	3 cut(s)	163, 760, 1198
TspRI	CASTG	5 cut(s)	558, 877, 1531, 1567, 1854
Tth111I	GACNNNGTC	1 cut(s)	1520
Vha464I	CTTAAG	1 cut(s)	1118
VneI	GTGCAC	2 cut(s)	1845, 2031
VpaK11BI	GGWCC	5 cut(s)	6, 196, 344, 641, 974
XapI	RAATTY	2 cut(s)	1386, 2109
XceI	RCATGY	1 cut(s)	1912
XhoI	CTCGAG	2 cut(s)	425, 1023
XmaJI	CCTAGG	1 cut(s)	845
XmnI	GAANNNNTTC	1 cut(s)	781
XspI	CTAG	5 cut(s)	387, 480, 846, 1779, 1997

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.