pycom03g11310
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Reverse (-)
11009248 .. 11010957
1710 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g11310.1

Sequence Viewer

Length: 1710 bp
ATGAAGCTTAAGGTTTTGATTGAAGATAACAATAAACTCATTGAATTATATGAAGGGGCCACTTCAGAGACTAGTTACAGAAATATTAACAAATCTGAATGTTCTCATGACGGCATCAAAGCTCACAGTAATAGTGGTGGTTTTGTGGAACTTGCCAAAGAAAAGGAGGCTGAGATGACTAAAGTGGTTGAGAATTTGGAGCATCAACTTGCAGATTTGCATGAAGAAAATGAGAAACTAATGGGGTTGTATGAAAGAGCCATGCAAGAGAGGGATGAACTCAAAAGGATGCTTGCATCTCCTATGTCTCTGGAGGGAAAGAATTTTATTGGCAATAATAGTCTTTCTGGTTCTGATGGAGGAGCAGTCTCAATAGAGGAATCTGGTTTGTCTGGATTGAATGCGCAAGCTAGGCTCGGCCATATATCTGATGAAGTGAAAGTGGAAATTGCAAGTGGTGGGTCGAAATCTGTGCTTGTTACTGCTGGTATATGCACAGTTAACACTGAAGGGGATTCTGGAAATGAGGTTGATGTTGGAACTGCGTCTGACATGGAACTGGACGCATCAGATCTCACCATAGTAAAGCTTTCAGACGATCTCAATTTGGCCAGAATGAATCTGGAAAAAGCAGATGAACAACTTCTAGATTCTGCAAAAACTGTTGCCTTATTTGGTTCCATCGAGAAATTAATTTTTGAGGTTGAAAAACTCTCAAGAGAAATTGAAGTAACGGAAAATGAACTTCAGGTCAAGCAGCAGCTTTTTGAATCGTATAAACTCCTCTGTGCAAAAGTGAAAGAAAATAGCAATCTGATAGACAAAAAGTTGTCAGCTCTCAAGTACTCCTTGTCTAACTTTTCTTCCTCAGTAGTTTACTTTGAGCAACGAGAAGCTCGGGCAAGATCAAGGGTAGAAGCTTCGACAGCGTATCTGGACCAAAAGAAAGGGGAATTGGTCTGCCTACAAGCACAAAAGGATGAAATAGCTACTGAACAGATGAAAATGCAACAATCTGAAGTCGAACTAAAGAAAAGTCTTGCATGCCTGAAGTCAAAGCTAGAGGATGAAAACCGAAAACAGGAGAATGAACAGGTTCTCTTTGCGATAGATAATGTTGAGAAGATAGACCCCTCACAGAAAAATTGGCATTTGGGAGGTAAAGCTACCGAGTTACTGAAGTCTGCGGAAGAGAAAACTAAACTGCAGATGGAGATGAAGCAATGTCGAGAAAATCTTGGAGTCGAGAGAAGGAAACTTGAGGATCTAAACAGGAAGTCTGATAAGGTAGATAGTGAGATGGTAGCTGTACAAGTGGAAATGCAGAAAGCTGTGAAGTCGGTGGAAGAGATGGAACTTGCACTTGAGAATGTGTTAAAAGAGAAGGAAATGCTGTTGGAAGTAAGAGATAACGGAAAGACTGAAATTGAAAGCCTGGTCGTTGAGTACCAGCAGAATTTGTGTGAGTCGGATTTGAAGGAGGCAGAGTCAAAGATTTTGGAGGAAGACTTGCAGACTGAGTTGCGAAAGTTGGAAGAGCTGCGAAAAGCAAGGGTTTTAGCGGCCGAGAAAACAATGCAGCTGTTGGAGACAAGGTCTCATCCATGCTTGTTATCAGAAAATATGGAGAAAGAGCTTGAGAGTGTTAGGAAATACGTCGTAGAGGCAAGGTCATGCCTGCTAAGTAGGGCCGATTCAACTGTCAGTTGA

Protein Analysis

570

Amino Acids

63.98

Weight (kDa)

4.92

Isoelectric Point (pI)

40.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011008)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 405
AciI CCGC 2 cut(s) 1187, 1562
AclWI GGATC 1 cut(s) 1272
AcoI YGGCCR 3 cut(s) 418, 609, 1563
AcsI RAATTY 3 cut(s) 193, 322, 1456
AcuI CTGAAG 6 cut(s) 48, 528, 731, 1038, 1070, 1199
AfaI GTAC 3 cut(s) 845, 1311, 1448
AfiI CCNNNNNNNGG 1 cut(s) 1081
AflII CTTAAG 1 cut(s) 8
AgsI TTSAA 9 cut(s) 23, 44, 400, 707, 728, 770, 1430, 1477, 1698
AhlI ACTAGT 1 cut(s) 71
AjnI CCWGG 1 cut(s) 1434
AjuI GAANNNNNNNTTGG 2 cut(s) 938, 970
Alw26I GTCTC 5 cut(s) 62, 312, 373, 1583, 1602
AlwI GGATC 1 cut(s) 1272
Ama87I CYCGRG 1 cut(s) 897
AoxI GGCC 5 cut(s) 57, 418, 609, 1563, 1689
ApeKI GCWGC 4 cut(s) 757, 760, 1540, 1579
ApoI RAATTY 3 cut(s) 193, 322, 1456
AseI ATTAAT 1 cut(s) 692
Asp700I GAANNNNTTC 2 cut(s) 642, 1095
AspLEI GCGC 1 cut(s) 406
AspS9I GGNCC 3 cut(s) 57, 937, 1689
AsuHPI GGTGA 1 cut(s) 568
AvaI CYCGRG 1 cut(s) 897
AvaII GGWCC 1 cut(s) 937
BalI TGGCCA 1 cut(s) 611
BbsI GAAGAC 1 cut(s) 1512
BbvI GCAGC 4 cut(s) 769, 772, 1527, 1591
BccI CCATC 5 cut(s) 350, 689, 1204, 1294, 1345
BceAI ACGGC 1 cut(s) 127
BcgI CGANNNNNNTGC 2 cut(s) 454, 488
BciT130I CCWGG 1 cut(s) 1436
BcoDI GTCTC 5 cut(s) 62, 312, 373, 1583, 1602
BcuI ACTAGT 1 cut(s) 71
BfaI CTAG 4 cut(s) 72, 411, 647, 1061
BfmI CTRYAG 1 cut(s) 1205
BfrI CTTAAG 1 cut(s) 8
BglII AGATCT 1 cut(s) 571
BisI GCNGC 5 cut(s) 758, 761, 1541, 1563, 1580
BlsI GCNGC 5 cut(s) 759, 762, 1542, 1564, 1581
BmcAI AGTACT 1 cut(s) 845
Bme1390I CCNGG 1 cut(s) 1436
Bme18I GGWCC 1 cut(s) 937
BmeT110I CYCGRG 1 cut(s) 897
BmgT120I GGNCC 3 cut(s) 57, 937, 1689
BmiI GGNNCC 2 cut(s) 58, 679
BmrFI CCNGG 1 cut(s) 1436
BmsI GCATC 5 cut(s) 123, 211, 279, 305, 575
BpiI GAAGAC 1 cut(s) 1512
BpmI CTGGAG 1 cut(s) 332
BpuEI CTTGAG 5 cut(s) 700, 824, 1280, 1385, 1658
BsaI GGTCTC 1 cut(s) 1602
BsaXI ACNNNNNCTCC 6 cut(s) 351, 381, 1472, 1502, 1580, 1610
Bsc4I CCNNNNNNNGG 1 cut(s) 1081
Bse1I ACTGG 1 cut(s) 564
Bse3DI GCAATG 1 cut(s) 1229
BseBI CCWGG 1 cut(s) 1436
BseGI GGATG 5 cut(s) 280, 294, 985, 1072, 1600
BseLI CCNNNNNNNGG 1 cut(s) 1081
BseMI GCAATG 1 cut(s) 1229
BseMII CTCAG 3 cut(s) 162, 882, 1509
BseNI ACTGG 1 cut(s) 564
BseRI GAGGAG 2 cut(s) 375, 773
BseX3I CGGCCG 1 cut(s) 1563
BseXI GCAGC 4 cut(s) 769, 772, 1527, 1591
Bsh1285I CGRYCG 1 cut(s) 1566
BshFI GGCC 5 cut(s) 59, 420, 611, 1565, 1691
BsiEI CGRYCG 1 cut(s) 1566
BsiHKCI CYCGRG 1 cut(s) 897
BslI CCNNNNNNNGG 1 cut(s) 1081
BsmAI GTCTC 5 cut(s) 62, 312, 373, 1583, 1602
BsmI GAATGC 1 cut(s) 406
BsnI GGCC 5 cut(s) 59, 420, 611, 1565, 1691
Bso31I GGTCTC 1 cut(s) 1602
BsoBI CYCGRG 1 cut(s) 897
Bsp1407I TGTACA 1 cut(s) 1309
Bsp143I GATC 4 cut(s) 571, 598, 905, 1264
BspACI CCGC 2 cut(s) 1187, 1562
BspANI GGCC 5 cut(s) 59, 420, 611, 1565, 1691
BspCNI CTCAG 3 cut(s) 163, 881, 1510
BspHI TCATGA 1 cut(s) 106
BspLI GGNNCC 2 cut(s) 58, 679
BspMAI CTGCAG 1 cut(s) 1209
BspPI GGATC 1 cut(s) 1272
BspQI GCTCTTC 1 cut(s) 1530
BspTI CTTAAG 1 cut(s) 8
BspTNI GGTCTC 1 cut(s) 1602
BsrDI GCAATG 1 cut(s) 1229
BsrGI TGTACA 1 cut(s) 1309
BsrI ACTGG 1 cut(s) 564
BssMI GATC 4 cut(s) 571, 598, 905, 1264
Bst2UI CCWGG 1 cut(s) 1436
Bst4CI ACNGT 4 cut(s) 128, 499, 664, 1702
Bst6I CTCTTC 3 cut(s) 1185, 1341, 1530
BstAFI CTTAAG 1 cut(s) 8
BstAUI TGTACA 1 cut(s) 1309
BstC8I GCNNGC 4 cut(s) 294, 408, 1045, 1679
BstDEI CTNAG 4 cut(s) 171, 868, 1518, 1682
BstF5I GGATG 5 cut(s) 280, 294, 985, 1072, 1600
BstHHI GCGC 1 cut(s) 406
BstKTI GATC 4 cut(s) 574, 601, 908, 1267
BstMAI GTCTC 5 cut(s) 62, 312, 373, 1583, 1602
BstMBI GATC 4 cut(s) 571, 598, 905, 1264
BstMCI CGRYCG 1 cut(s) 1566
BstMWI GCNNNNNNNGC 2 cut(s) 412, 926
BstNI CCWGG 1 cut(s) 1436
BstNSI RCATGY 1 cut(s) 1047
BstSCI CCNGG 1 cut(s) 1434
BstSFI CTRYAG 1 cut(s) 1205
BstV1I GCAGC 4 cut(s) 769, 772, 1527, 1591
BstV2I GAAGAC 1 cut(s) 1512
BstX2I RGATCY 2 cut(s) 571, 1264
BstYI RGATCY 2 cut(s) 571, 1264
BstZI CGGCCG 1 cut(s) 1563
BsuRI GGCC 5 cut(s) 59, 420, 611, 1565, 1691
BtsCI GGATG 5 cut(s) 280, 294, 985, 1072, 1600
BtsIMutI CAGTG 1 cut(s) 504
Cac8I GCNNGC 4 cut(s) 294, 408, 1045, 1679
CciI TCATGA 1 cut(s) 106
CfoI GCGC 1 cut(s) 406
Cfr13I GGNCC 3 cut(s) 57, 937, 1689
CseI GACGC 2 cut(s) 534, 572
Csp6I GTAC 3 cut(s) 844, 1310, 1447
CviAII CATG 7 cut(s) 107, 221, 262, 553, 1044, 1605, 1674
CviQI GTAC 3 cut(s) 844, 1310, 1447
DdeI CTNAG 4 cut(s) 171, 868, 1518, 1682
DpnI GATC 4 cut(s) 573, 600, 907, 1266
DpnII GATC 4 cut(s) 571, 598, 905, 1264
EaeI YGGCCR 3 cut(s) 418, 609, 1563
EagI CGGCCG 1 cut(s) 1563
Eam1104I CTCTTC 3 cut(s) 1185, 1341, 1530
EarI CTCTTC 3 cut(s) 1185, 1341, 1530
EclXI CGGCCG 1 cut(s) 1563
Eco31I GGTCTC 1 cut(s) 1602
Eco47I GGWCC 1 cut(s) 937
Eco52I CGGCCG 1 cut(s) 1563
Eco57I CTGAAG 6 cut(s) 48, 528, 731, 1038, 1070, 1199
Eco88I CYCGRG 1 cut(s) 897
EcoRII CCWGG 1 cut(s) 1434
FaeI CATG 7 cut(s) 110, 224, 265, 556, 1047, 1608, 1677
FalI AAGNNNNNCTT 2 cut(s) 833, 865
FatI CATG 7 cut(s) 106, 220, 261, 552, 1043, 1604, 1673
Fnu4HI GCNGC 5 cut(s) 758, 761, 1541, 1563, 1580
FokI GGATG 5 cut(s) 287, 301, 992, 1079, 1587
Fsp4HI GCNGC 5 cut(s) 758, 761, 1541, 1563, 1580
FspBI CTAG 4 cut(s) 72, 411, 647, 1061
FspI TGCGCA 1 cut(s) 405
GlaI GCGC 1 cut(s) 405
GluI GCNGC 5 cut(s) 758, 761, 1541, 1563, 1580
GsuI CTGGAG 1 cut(s) 332
HaeIII GGCC 5 cut(s) 59, 420, 611, 1565, 1691
HgaI GACGC 2 cut(s) 534, 572
HhaI GCGC 1 cut(s) 406
Hin1II CATG 7 cut(s) 110, 224, 265, 556, 1047, 1608, 1677
Hin6I GCGC 1 cut(s) 404
HinP1I GCGC 1 cut(s) 404
HincII GTYRAC 1 cut(s) 502
HindII GTYRAC 1 cut(s) 502
HindIII AAGCTT 3 cut(s) 5, 587, 918
HinfI GANTC 9 cut(s) 380, 515, 619, 650, 770, 1242, 1466, 1487, 1694
HpaI GTTAAC 1 cut(s) 502
HphI GGTGA 1 cut(s) 568
Hpy166II GTNNAC 2 cut(s) 502, 877
Hpy8I GTNNAC 2 cut(s) 502, 877
Hpy99I CGWCG 1 cut(s) 1661
HpyAV CCTTC 5 cut(s) 47, 503, 1245, 1378, 1471
HpyCH4III ACNGT 4 cut(s) 128, 499, 664, 1702
HpyCH4IV ACGT 1 cut(s) 1656
HpyF10VI GCNNNNNNNGC 2 cut(s) 412, 926
HpyF3I CTNAG 4 cut(s) 171, 868, 1518, 1682
HpySE526I ACGT 1 cut(s) 1656
Hsp92II CATG 7 cut(s) 110, 224, 265, 556, 1047, 1608, 1677
HspAI GCGC 1 cut(s) 404
KspAI GTTAAC 1 cut(s) 502
Kzo9I GATC 4 cut(s) 571, 598, 905, 1264
LguI GCTCTTC 1 cut(s) 1530
LmnI GCTCC 2 cut(s) 199, 362
Lsp1109I GCAGC 4 cut(s) 769, 772, 1527, 1591
LweI GCATC 5 cut(s) 123, 211, 279, 305, 575
MaeI CTAG 4 cut(s) 72, 411, 647, 1061
MaeII ACGT 1 cut(s) 1656
MaeIII GTNAC 4 cut(s) 74, 478, 730, 1173
MalI GATC 4 cut(s) 573, 600, 907, 1266
MboI GATC 4 cut(s) 571, 598, 905, 1264
MboII GAAGA 8 cut(s) 35, 236, 855, 1135, 1202, 1358, 1517, 1547
MflI RGATCY 2 cut(s) 571, 1264
MlsI TGGCCA 1 cut(s) 611
MluNI TGGCCA 1 cut(s) 611
MlyI GAGTC 3 cut(s) 1251, 1475, 1496
MmeI TCCRAC 5 cut(s) 517, 1377, 1449, 1512, 1566
Mox20I TGGCCA 1 cut(s) 611
MroXI GAANNNNTTC 2 cut(s) 642, 1095
MscI TGGCCA 1 cut(s) 611
MseI TTAA 5 cut(s) 9, 87, 501, 692, 1376
Msp20I TGGCCA 1 cut(s) 611
MspA1I CMGCKG 1 cut(s) 1582
MspCI CTTAAG 1 cut(s) 8
MspR9I CCNGG 1 cut(s) 1436
Mva1269I GAATGC 1 cut(s) 406
MvaI CCWGG 1 cut(s) 1436
MwoI GCNNNNNNNGC 2 cut(s) 412, 926
NdeII GATC 4 cut(s) 571, 598, 905, 1264
NlaIII CATG 7 cut(s) 110, 224, 265, 556, 1047, 1608, 1677
NlaIV GGNNCC 2 cut(s) 58, 679
NmeAIII GCCGAG 2 cut(s) 396, 1591
NsbI TGCGCA 1 cut(s) 405
NspI RCATGY 1 cut(s) 1047
PaeI GCATGC 1 cut(s) 1047
PagI TCATGA 1 cut(s) 106
PciSI GCTCTTC 1 cut(s) 1530
PctI GAATGC 1 cut(s) 406
PdmI GAANNNNTTC 2 cut(s) 642, 1095
PfeI GAWTC 6 cut(s) 380, 515, 619, 650, 770, 1694
PflFI GACNNNGTC 1 cut(s) 1594
PkrI GCNGC 5 cut(s) 759, 762, 1542, 1564, 1581
PleI GAGTC 3 cut(s) 1250, 1474, 1495
PpsI GAGTC 3 cut(s) 1250, 1474, 1495
PshBI ATTAAT 1 cut(s) 692
Psp6I CCWGG 1 cut(s) 1434
PspGI CCWGG 1 cut(s) 1434
PspN4I GGNNCC 2 cut(s) 58, 679
PspPI GGNCC 3 cut(s) 57, 937, 1689
PstI CTGCAG 1 cut(s) 1209
PsuI RGATCY 2 cut(s) 571, 1264
PsyI GACNNNGTC 1 cut(s) 1594
PvuII CAGCTG 1 cut(s) 1582
RsaI GTAC 3 cut(s) 845, 1311, 1448
RsaNI GTAC 3 cut(s) 844, 1310, 1447
SapI GCTCTTC 1 cut(s) 1530
SaqAI TTAA 5 cut(s) 9, 87, 501, 692, 1376
SatI GCNGC 5 cut(s) 758, 761, 1541, 1563, 1580
Sau3AI GATC 4 cut(s) 571, 598, 905, 1264
Sau96I GGNCC 3 cut(s) 57, 937, 1689
ScaI AGTACT 1 cut(s) 845
SchI GAGTC 3 cut(s) 1251, 1475, 1496
ScrFI CCNGG 1 cut(s) 1436
SfaNI GCATC 5 cut(s) 123, 211, 279, 305, 575
SfcI CTRYAG 1 cut(s) 1205
SinI GGWCC 1 cut(s) 937
SmlI CTYRAG 6 cut(s) 8, 715, 839, 1259, 1364, 1637
SmoI CTYRAG 6 cut(s) 8, 715, 839, 1259, 1364, 1637
SpeI ACTAGT 1 cut(s) 71
SphI GCATGC 1 cut(s) 1047
SsiI CCGC 2 cut(s) 1187, 1562
SspI AATATT 1 cut(s) 85
SspMI CTAG 4 cut(s) 72, 411, 647, 1061
StyD4I CCNGG 1 cut(s) 1434
TaaI ACNGT 4 cut(s) 128, 499, 664, 1702
TaiI ACGT 1 cut(s) 1659
TaqI TCGA 6 cut(s) 464, 684, 923, 1023, 1228, 1245
TatI WGTACW 2 cut(s) 843, 1309
TauI GCSGC 1 cut(s) 1565
TfiI GAWTC 6 cut(s) 380, 515, 619, 650, 770, 1694
Tru1I TTAA 5 cut(s) 9, 87, 501, 692, 1376
Tru9I TTAA 5 cut(s) 9, 87, 501, 692, 1376
TscAI CASTG 1 cut(s) 511
TseI GCWGC 4 cut(s) 757, 760, 1540, 1579
TspGWI ACGGA 2 cut(s) 749, 1428
TspRI CASTG 1 cut(s) 511
Tth111I GACNNNGTC 1 cut(s) 1594
Vha464I CTTAAG 1 cut(s) 8
VpaK11BI GGWCC 1 cut(s) 937
VspI ATTAAT 1 cut(s) 692
XapI RAATTY 3 cut(s) 193, 322, 1456
XbaI TCTAGA 1 cut(s) 646
XceI RCATGY 1 cut(s) 1047
XcmI CCANNNNNNNNNTGG 1 cut(s) 619
XmnI GAANNNNTTC 2 cut(s) 642, 1095
XspI CTAG 4 cut(s) 72, 411, 647, 1061
ZrmI AGTACT 1 cut(s) 845
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.