Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G44050 |
| fragaria_vesca | FvH4_3g26820 FvH4_3g26820 |
| malus_domestica | MD03G1160900.v1.1 MD11G1176500.v1.1 |
| prunus_persica | Prupe.6G149000_v2.0.a1 Prupe.6G149000_v2.0.a1 |
| pyrus_communis | pycom03g11310 pycom03g11320 pycom11g15070 |
| rosa_chinensis | RchiOBHm_Chr5g0049231 |
| rosa_laevigata | RLG00000034603 |
| rosa_multiflora | Rmu_sc0005358.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00032440 |
| rosa_rugosa | Rorug05G0245900 |
| rosa_samantha | Rh5AG323900 Rh5BG334500 Rh5CG359200 Rh5DG346600 |
| rosa_wichuraiana | Rw5G030590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1181 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 176 |
| AatII | GACGTC | 1 cut(s) | 197 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 4237 |
| AccBSI | CCGCTC | 1 cut(s) | 1864 |
| AccI | GTMKAC | 1 cut(s) | 3616 |
| AccII | CGCG | 2 cut(s) | 222, 4244 |
| AccIII | TCCGGA | 3 cut(s) | 75, 85, 2894 |
| AciI | CCGC | 9 cut(s) | 102, 105, 186, 220, 1689, 1813, 1864, 3176, 3642 |
| AclWI | GGATC | 8 cut(s) | 96, 708, 985, 1429, 1438, 1449, 1462, 3258 |
| AcoI | YGGCCR | 1 cut(s) | 493 |
| AcuI | CTGAAG | 9 cut(s) | 1026, 1130, 1652, 2970, 3096, 3192, 3690, 3851, 4001 |
| AcyI | GRCGYC | 2 cut(s) | 194, 578 |
| AdeI | CACNNNGTG | 1 cut(s) | 1250 |
| AfaI | GTAC | 8 cut(s) | 596, 1118, 2503, 2530, 2709, 2947, 3525, 4100 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 111, 237, 507, 876, 2089, 2843, 4237 |
| AflII | CTTAAG | 2 cut(s) | 1334, 2408 |
| AflIII | ACRYGT | 1 cut(s) | 2855 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 560, 715 |
| AjnI | CCWGG | 5 cut(s) | 255, 1417, 1426, 1581, 2812 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 101, 133, 804, 836, 2147, 2179, 3171, 3203 |
| AleI | CACNNNNGTG | 1 cut(s) | 2757 |
| Alw21I | GWGCWC | 4 cut(s) | 83, 799, 1232, 2869 |
| Alw26I | GTCTC | 9 cut(s) | 1050, 1214, 1700, 2201, 2354, 3038, 3134, 3209, 3995 |
| AlwI | GGATC | 8 cut(s) | 96, 708, 985, 1429, 1438, 1449, 1462, 3258 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 697, 980 |
| Ama87I | CYCGRG | 4 cut(s) | 798, 3549, 3879, 4094 |
| Aor13HI | TCCGGA | 3 cut(s) | 75, 85, 2894 |
| AoxI | GGCC | 7 cut(s) | 493, 1360, 1627, 2091, 2457, 3589, 4317 |
| AseI | ATTAAT | 1 cut(s) | 2280 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 693, 2039, 3723, 4287, 4308 |
| AspLEI | GCGC | 2 cut(s) | 29, 127 |
| AspS9I | GGNCC | 5 cut(s) | 73, 709, 879, 2457, 3589 |
| AsuC2I | CCSGG | 3 cut(s) | 71, 373, 1121 |
| AsuHPI | GGTGA | 5 cut(s) | 929, 1022, 1871, 2942, 4004 |
| AsuNHI | GCTAGC | 1 cut(s) | 1597 |
| AvaI | CYCGRG | 4 cut(s) | 798, 3549, 3879, 4094 |
| AvaII | GGWCC | 3 cut(s) | 73, 709, 879 |
| BaeGI | GKGCMC | 1 cut(s) | 2274 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 4082, 4082, 4115, 4115 |
| BalI | TGGCCA | 1 cut(s) | 495 |
| BamHI | GGATCC | 1 cut(s) | 1454 |
| BanII | GRGCYC | 3 cut(s) | 1950, 2221, 4210 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1605, 1637 |
| BbsI | GAAGAC | 5 cut(s) | 231, 518, 559, 747, 4229 |
| Bbv12I | GWGCWC | 4 cut(s) | 83, 799, 1232, 2869 |
| BbvCI | CCTCAGC | 2 cut(s) | 128, 2349 |
| BceAI | ACGGC | 1 cut(s) | 36 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1300, 1334 |
| BciT130I | CCWGG | 5 cut(s) | 257, 1419, 1428, 1583, 2814 |
| BciVI | GTATCC | 1 cut(s) | 1357 |
| BclI | TGATCA | 1 cut(s) | 2290 |
| BcnI | CCSGG | 3 cut(s) | 71, 373, 1121 |
| BcoDI | GTCTC | 9 cut(s) | 1050, 1214, 1700, 2201, 2354, 3038, 3134, 3209, 3995 |
| BfmI | CTRYAG | 4 cut(s) | 1559, 2476, 3231, 3857 |
| BfoI | RGCGCY | 2 cut(s) | 30, 128 |
| BfrI | CTTAAG | 2 cut(s) | 1334, 2408 |
| BfuI | GTATCC | 1 cut(s) | 1357 |
| BglII | AGATCT | 3 cut(s) | 1695, 3989, 4247 |
| BlpI | GCTNAGC | 1 cut(s) | 1992 |
| BmcAI | AGTACT | 5 cut(s) | 596, 2503, 2530, 2709, 3525 |
| Bme1390I | CCNGG | 8 cut(s) | 71, 257, 373, 1121, 1419, 1428, 1583, 2814 |
| Bme18I | GGWCC | 3 cut(s) | 73, 709, 879 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 560, 715 |
| BmeT110I | CYCGRG | 4 cut(s) | 798, 3549, 3879, 4094 |
| BmgT120I | GGNCC | 5 cut(s) | 73, 709, 879, 2457, 3589 |
| BmiI | GGNNCC | 5 cut(s) | 50, 711, 881, 1456, 2458 |
| BmrFI | CCNGG | 8 cut(s) | 71, 257, 373, 1121, 1419, 1428, 1583, 2814 |
| BmrI | ACTGGG | 2 cut(s) | 154, 366 |
| BmsI | GCATC | 9 cut(s) | 144, 370, 909, 1279, 1301, 2590, 2771, 3093, 3100 |
| BmtI | GCTAGC | 1 cut(s) | 1601 |
| BmuI | ACTGGG | 2 cut(s) | 154, 366 |
| BpiI | GAAGAC | 5 cut(s) | 231, 518, 559, 747, 4229 |
| BpmI | CTGGAG | 3 cut(s) | 1317, 3233, 3734 |
| Bpu10I | CCTNAGC | 2 cut(s) | 128, 2349 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1992 |
| BpuEI | CTTGAG | 7 cut(s) | 17, 589, 758, 1749, 2950, 3352, 3932 |
| BpuMI | CCSGG | 3 cut(s) | 71, 373, 1121 |
| BsaAI | YACGTR | 1 cut(s) | 763 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2916 |
| BsaHI | GRCGYC | 2 cut(s) | 194, 578 |
| BsaJI | CCNNGG | 2 cut(s) | 925, 3837 |
| BsaWI | WCCGGW | 4 cut(s) | 75, 85, 500, 2894 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 4031, 4061, 4145, 4175 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 111, 237, 507, 876, 2089, 2843, 4237 |
| Bse118I | RCCGGY | 1 cut(s) | 39 |
| Bse1I | ACTGG | 8 cut(s) | 149, 361, 870, 2536, 3279, 3717, 3745, 4231 |
| Bse3DI | GCAATG | 1 cut(s) | 4325 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2916 |
| BseAI | TCCGGA | 3 cut(s) | 75, 85, 2894 |
| BseBI | CCWGG | 5 cut(s) | 257, 1419, 1428, 1583, 2814 |
| BseDI | CCNNGG | 2 cut(s) | 925, 3837 |
| BseGI | GGATG | 7 cut(s) | 361, 579, 1294, 1450, 3637, 3687, 4192 |
| BseJI | GATNNNNATC | 1 cut(s) | 2916 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 111, 237, 507, 876, 2089, 2843, 4237 |
| BseMI | GCAATG | 1 cut(s) | 4325 |
| BseNI | ACTGG | 8 cut(s) | 149, 361, 870, 2536, 3279, 3717, 3745, 4231 |
| BseRI | GAGGAG | 6 cut(s) | 145, 2081, 2841, 3929, 4169, 4172 |
| BseSI | GKGCMC | 1 cut(s) | 2274 |
| BsgI | GTGCAG | 4 cut(s) | 849, 1539, 2889, 3630 |
| Bsh1236I | CGCG | 2 cut(s) | 222, 4244 |
| BshFI | GGCC | 7 cut(s) | 495, 1362, 1629, 2093, 2459, 3591, 4319 |
| BsiHKAI | GWGCWC | 4 cut(s) | 83, 799, 1232, 2869 |
| BsiHKCI | CYCGRG | 4 cut(s) | 798, 3549, 3879, 4094 |
| BsiSI | CCGG | 8 cut(s) | 40, 71, 76, 86, 373, 501, 1120, 2895 |
| BslFI | GGGAC | 6 cut(s) | 161, 261, 355, 865, 1074, 2666 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 111, 237, 507, 876, 2089, 2843, 4237 |
| BsmAI | GTCTC | 9 cut(s) | 1050, 1214, 1700, 2201, 2354, 3038, 3134, 3209, 3995 |
| BsmBI | CGTCTC | 1 cut(s) | 1214 |
| BsmFI | GGGAC | 6 cut(s) | 161, 261, 355, 865, 1074, 2666 |
| BsmI | GAATGC | 3 cut(s) | 926, 1583, 2039 |
| BsnI | GGCC | 7 cut(s) | 495, 1362, 1629, 2093, 2459, 3591, 4319 |
| BsoBI | CYCGRG | 4 cut(s) | 798, 3549, 3879, 4094 |
| Bsp1286I | GDGCHC | 8 cut(s) | 83, 799, 1232, 1950, 2221, 2274, 2869, 4210 |
| Bsp13I | TCCGGA | 3 cut(s) | 75, 85, 2894 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1992 |
| BspACI | CCGC | 9 cut(s) | 102, 105, 186, 220, 1689, 1813, 1864, 3176, 3642 |
| BspANI | GGCC | 7 cut(s) | 495, 1362, 1629, 2093, 2459, 3591, 4319 |
| BspEI | TCCGGA | 3 cut(s) | 75, 85, 2894 |
| BspFNI | CGCG | 2 cut(s) | 222, 4244 |
| BspHI | TCATGA | 3 cut(s) | 2356, 2506, 3099 |
| BspLI | GGNNCC | 5 cut(s) | 50, 711, 881, 1456, 2458 |
| BspMAI | CTGCAG | 2 cut(s) | 1563, 3861 |
| BspOI | GCTAGC | 1 cut(s) | 1601 |
| BspPI | GGATC | 8 cut(s) | 96, 708, 985, 1429, 1438, 1449, 1462, 3258 |
| BspQI | GCTCTTC | 1 cut(s) | 4278 |
| BspTI | CTTAAG | 2 cut(s) | 1334, 2408 |
| BsrBI | CCGCTC | 1 cut(s) | 1864 |
| BsrDI | GCAATG | 1 cut(s) | 4325 |
| BsrFI | RCCGGY | 1 cut(s) | 39 |
| BsrI | ACTGG | 8 cut(s) | 149, 361, 870, 2536, 3279, 3717, 3745, 4231 |
| BssAI | RCCGGY | 1 cut(s) | 39 |
| BssECI | CCNNGG | 2 cut(s) | 925, 3837 |
| BssNI | GRCGYC | 2 cut(s) | 194, 578 |
| BssT1I | CCWWGG | 1 cut(s) | 925 |
| Bst2UI | CCWGG | 5 cut(s) | 257, 1419, 1428, 1583, 2814 |
| Bst4CI | ACNGT | 9 cut(s) | 346, 560, 569, 1017, 2528, 3064, 3160, 3316, 4351 |
| Bst6I | CTCTTC | 8 cut(s) | 67, 986, 2145, 2199, 3520, 3837, 3993, 4278 |
| BstACI | GRCGYC | 2 cut(s) | 194, 578 |
| BstAFI | CTTAAG | 2 cut(s) | 1334, 2408 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1250, 2327 |
| BstBAI | YACGTR | 1 cut(s) | 763 |
| BstC8I | GCNNGC | 7 cut(s) | 25, 631, 1563, 1599, 1660, 1687, 2091 |
| BstF5I | GGATG | 7 cut(s) | 361, 579, 1294, 1450, 3637, 3687, 4192 |
| BstFNI | CGCG | 2 cut(s) | 222, 4244 |
| BstH2I | RGCGCY | 2 cut(s) | 30, 128 |
| BstHHI | GCGC | 2 cut(s) | 29, 127 |
| BstMAI | GTCTC | 9 cut(s) | 1050, 1214, 1700, 2201, 2354, 3038, 3134, 3209, 3995 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 465, 1250, 1562, 2327, 2404, 4214 |
| BstNI | CCWGG | 5 cut(s) | 257, 1419, 1428, 1583, 2814 |
| BstNSI | RCATGY | 3 cut(s) | 484, 900, 2859 |
| BstSCI | CCNGG | 8 cut(s) | 69, 255, 371, 1119, 1417, 1426, 1581, 2812 |
| BstSFI | CTRYAG | 4 cut(s) | 1559, 2476, 3231, 3857 |
| BstSLI | GKGCMC | 1 cut(s) | 2274 |
| BstUI | CGCG | 2 cut(s) | 222, 4244 |
| BstV2I | GAAGAC | 5 cut(s) | 231, 518, 559, 747, 4229 |
| BsuI | GTATCC | 1 cut(s) | 1357 |
| BsuRI | GGCC | 7 cut(s) | 495, 1362, 1629, 2093, 2459, 3591, 4319 |
| BtgZI | GCGATG | 1 cut(s) | 1325 |
| BtsCI | GGATG | 7 cut(s) | 361, 579, 1294, 1450, 3637, 3687, 4192 |
| BtsI | GCAGTG | 3 cut(s) | 1551, 1556, 2901 |
| BtsIMutI | CAGTG | 7 cut(s) | 288, 565, 1551, 1556, 2293, 2514, 2901 |
| Cac8I | GCNNGC | 7 cut(s) | 25, 631, 1563, 1599, 1660, 1687, 2091 |
| CaiI | CAGNNNCTG | 2 cut(s) | 697, 980 |
| CciI | TCATGA | 3 cut(s) | 2356, 2506, 3099 |
| CfoI | GCGC | 2 cut(s) | 29, 127 |
| Cfr10I | RCCGGY | 1 cut(s) | 39 |
| Cfr13I | GGNCC | 5 cut(s) | 73, 709, 879, 2457, 3589 |
| CpoI | CGGWCCG | 1 cut(s) | 73 |
| CseI | GACGC | 3 cut(s) | 586, 2327, 4250 |
| Csp6I | GTAC | 8 cut(s) | 595, 1117, 2502, 2529, 2708, 2946, 3524, 4099 |
| CspI | CGGWCCG | 1 cut(s) | 73 |
| CviQI | GTAC | 8 cut(s) | 595, 1117, 2502, 2529, 2708, 2946, 3524, 4099 |
| DraI | TTTAAA | 1 cut(s) | 2487 |
| DraIII | CACNNNGTG | 1 cut(s) | 1250 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 176 |
| DriI | GACNNNNNGTC | 2 cut(s) | 560, 715 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 176 |
| EaeI | YGGCCR | 1 cut(s) | 493 |
| Eam1104I | CTCTTC | 8 cut(s) | 67, 986, 2145, 2199, 3520, 3837, 3993, 4278 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 560, 715 |
| EarI | CTCTTC | 8 cut(s) | 67, 986, 2145, 2199, 3520, 3837, 3993, 4278 |
| EciI | GGCGGA | 1 cut(s) | 91 |
| Eco130I | CCWWGG | 1 cut(s) | 925 |
| Eco147I | AGGCCT | 2 cut(s) | 1362, 1629 |
| Eco24I | GRGCYC | 3 cut(s) | 1950, 2221, 4210 |
| Eco47I | GGWCC | 3 cut(s) | 73, 709, 879 |
| Eco57I | CTGAAG | 9 cut(s) | 1026, 1130, 1652, 2970, 3096, 3192, 3690, 3851, 4001 |
| Eco88I | CYCGRG | 4 cut(s) | 798, 3549, 3879, 4094 |
| EcoRI | GAATTC | 4 cut(s) | 609, 1165, 2657, 3605 |
| EcoRII | CCWGG | 5 cut(s) | 255, 1417, 1426, 1581, 2812 |
| EcoT14I | CCWWGG | 1 cut(s) | 925 |
| EcoT22I | ATGCAT | 5 cut(s) | 902, 1294, 1938, 2601, 3108 |
| EcoT38I | GRGCYC | 3 cut(s) | 1950, 2221, 4210 |
| ErhI | CCWWGG | 1 cut(s) | 925 |
| Esp3I | CGTCTC | 1 cut(s) | 1214 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 1500, 1532, 2130, 2162, 2232, 2264, 4272, 4304 |
| FaqI | GGGAC | 6 cut(s) | 161, 261, 355, 865, 1074, 2666 |
| FauI | CCCGC | 1 cut(s) | 1857 |
| FauNDI | CATATG | 1 cut(s) | 656 |
| FbaI | TGATCA | 1 cut(s) | 2290 |
| FblI | GTMKAC | 1 cut(s) | 3616 |
| FokI | GGATG | 7 cut(s) | 348, 586, 1301, 1457, 3644, 3674, 4199 |
| FriOI | GRGCYC | 3 cut(s) | 1950, 2221, 4210 |
| GlaI | GCGC | 2 cut(s) | 28, 126 |
| GsuI | CTGGAG | 3 cut(s) | 1317, 3233, 3734 |
| HaeII | RGCGCY | 2 cut(s) | 30, 128 |
| HaeIII | GGCC | 7 cut(s) | 495, 1362, 1629, 2093, 2459, 3591, 4319 |
| HapII | CCGG | 8 cut(s) | 40, 71, 76, 86, 373, 501, 1120, 2895 |
| HgaI | GACGC | 3 cut(s) | 586, 2327, 4250 |
| HhaI | GCGC | 2 cut(s) | 29, 127 |
| Hin1I | GRCGYC | 2 cut(s) | 194, 578 |
| Hin6I | GCGC | 2 cut(s) | 27, 125 |
| HinP1I | GCGC | 2 cut(s) | 27, 125 |
| HincII | GTYRAC | 4 cut(s) | 565, 967, 2317, 3483 |
| HindII | GTYRAC | 4 cut(s) | 565, 967, 2317, 3483 |
| HindIII | AAGCTT | 5 cut(s) | 1411, 2405, 2726, 3239, 3431 |
| HpaII | CCGG | 8 cut(s) | 40, 71, 76, 86, 373, 501, 1120, 2895 |
| HphI | GGTGA | 5 cut(s) | 929, 1022, 1871, 2942, 4004 |
| Hpy99I | CGWCG | 5 cut(s) | 155, 167, 196, 199, 718 |
| HpyCH4III | ACNGT | 9 cut(s) | 346, 560, 569, 1017, 2528, 3064, 3160, 3316, 4351 |
| HpyCH4IV | ACGT | 5 cut(s) | 194, 252, 762, 1223, 1249 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 465, 1250, 1562, 2327, 2404, 4214 |
| HpySE526I | ACGT | 5 cut(s) | 194, 252, 762, 1223, 1249 |
| Hsp92I | GRCGYC | 2 cut(s) | 194, 578 |
| HspAI | GCGC | 2 cut(s) | 27, 125 |
| Kpn2I | TCCGGA | 3 cut(s) | 75, 85, 2894 |
| Ksp22I | TGATCA | 1 cut(s) | 2290 |
| LguI | GCTCTTC | 1 cut(s) | 4278 |
| LmnI | GCTCC | 5 cut(s) | 78, 132, 415, 2299, 2864 |
| LweI | GCATC | 9 cut(s) | 144, 370, 909, 1279, 1301, 2590, 2771, 3093, 3100 |
| MaeII | ACGT | 5 cut(s) | 194, 252, 762, 1223, 1249 |
| MaeIII | GTNAC | 6 cut(s) | 346, 787, 931, 1101, 1786, 3825 |
| MbiI | CCGCTC | 1 cut(s) | 1864 |
| MfeI | CAATTG | 3 cut(s) | 1275, 2322, 3416 |
| MhlI | GDGCHC | 8 cut(s) | 83, 799, 1232, 1950, 2221, 2274, 2869, 4210 |
| MlsI | TGGCCA | 1 cut(s) | 495 |
| MluNI | TGGCCA | 1 cut(s) | 495 |
| MlyI | GAGTC | 3 cut(s) | 377, 594, 3457 |
| MmeI | TCCRAC | 5 cut(s) | 90, 835, 1653, 3531, 4029 |
| Mox20I | TGGCCA | 1 cut(s) | 495 |
| Mph1103I | ATGCAT | 5 cut(s) | 902, 1294, 1938, 2601, 3108 |
| MroI | TCCGGA | 3 cut(s) | 75, 85, 2894 |
| MroXI | GAANNNNTTC | 5 cut(s) | 693, 2039, 3723, 4287, 4308 |
| MscI | TGGCCA | 1 cut(s) | 495 |
| MslI | CAYNNNNRTG | 4 cut(s) | 2001, 2757, 3038, 3134 |
| Msp20I | TGGCCA | 1 cut(s) | 495 |
| MspA1I | CMGCKG | 4 cut(s) | 1689, 3612, 3644, 4217 |
| MspCI | CTTAAG | 2 cut(s) | 1334, 2408 |
| MspI | CCGG | 8 cut(s) | 40, 71, 76, 86, 373, 501, 1120, 2895 |
| MspR9I | CCNGG | 8 cut(s) | 71, 257, 373, 1121, 1419, 1428, 1583, 2814 |
| MunI | CAATTG | 3 cut(s) | 1275, 2322, 3416 |
| Mva1269I | GAATGC | 3 cut(s) | 926, 1583, 2039 |
| MvaI | CCWGG | 5 cut(s) | 257, 1419, 1428, 1583, 2814 |
| MvnI | CGCG | 2 cut(s) | 222, 4244 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 465, 1250, 1562, 2327, 2404, 4214 |
| NciI | CCSGG | 3 cut(s) | 71, 373, 1121 |
| NdeI | CATATG | 1 cut(s) | 656 |
| NheI | GCTAGC | 1 cut(s) | 1597 |
| NlaIV | GGNNCC | 5 cut(s) | 50, 711, 881, 1456, 2458 |
| NmeAIII | GCCGAG | 3 cut(s) | 101, 931, 3649 |
| NmuCI | GTSAC | 2 cut(s) | 1101, 1786 |
| NsiI | ATGCAT | 5 cut(s) | 902, 1294, 1938, 2601, 3108 |
| NspI | RCATGY | 3 cut(s) | 484, 900, 2859 |
| OliI | CACNNNNGTG | 1 cut(s) | 2757 |
| PaeR7I | CTCGAG | 3 cut(s) | 798, 3879, 4094 |
| PagI | TCATGA | 3 cut(s) | 2356, 2506, 3099 |
| PceI | AGGCCT | 2 cut(s) | 1362, 1629 |
| PciI | ACATGT | 1 cut(s) | 2855 |
| PciSI | GCTCTTC | 1 cut(s) | 4278 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 51, 159, 219 |
| PctI | GAATGC | 3 cut(s) | 926, 1583, 2039 |
| PdmI | GAANNNNTTC | 5 cut(s) | 693, 2039, 3723, 4287, 4308 |
| PflFI | GACNNNGTC | 2 cut(s) | 71, 196 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 4237 |
| PfoI | TCCNGGA | 2 cut(s) | 1417, 1426 |
| PleI | GAGTC | 3 cut(s) | 376, 593, 3457 |
| PpsI | GAGTC | 3 cut(s) | 376, 593, 3457 |
| Ppu21I | YACGTR | 1 cut(s) | 763 |
| PscI | ACATGT | 1 cut(s) | 2855 |
| PshBI | ATTAAT | 1 cut(s) | 2280 |
| PsiI | TTATAA | 1 cut(s) | 1181 |
| Psp6I | CCWGG | 5 cut(s) | 255, 1417, 1426, 1581, 2812 |
| PspGI | CCWGG | 5 cut(s) | 255, 1417, 1426, 1581, 2812 |
| PspN4I | GGNNCC | 5 cut(s) | 50, 711, 881, 1456, 2458 |
| PspPI | GGNCC | 5 cut(s) | 73, 709, 879, 2457, 3589 |
| PspXI | VCTCGAGB | 1 cut(s) | 4094 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2800, 2832 |
| PstI | CTGCAG | 2 cut(s) | 1563, 3861 |
| PstNI | CAGNNNCTG | 2 cut(s) | 697, 980 |
| PsyI | GACNNNGTC | 2 cut(s) | 71, 196 |
| PvuII | CAGCTG | 2 cut(s) | 3612, 4217 |
| RsaI | GTAC | 8 cut(s) | 596, 1118, 2503, 2530, 2709, 2947, 3525, 4100 |
| RsaNI | GTAC | 8 cut(s) | 595, 1117, 2502, 2529, 2708, 2946, 3524, 4099 |
| RseI | CAYNNNNRTG | 4 cut(s) | 2001, 2757, 3038, 3134 |
| Rsr2I | CGGWCCG | 1 cut(s) | 73 |
| RsrII | CGGWCCG | 1 cut(s) | 73 |
| SapI | GCTCTTC | 1 cut(s) | 4278 |
| Sau96I | GGNCC | 5 cut(s) | 73, 709, 879, 2457, 3589 |
| ScaI | AGTACT | 5 cut(s) | 596, 2503, 2530, 2709, 3525 |
| SchI | GAGTC | 3 cut(s) | 377, 594, 3457 |
| ScrFI | CCNGG | 8 cut(s) | 71, 257, 373, 1121, 1419, 1428, 1583, 2814 |
| SduI | GDGCHC | 8 cut(s) | 83, 799, 1232, 1950, 2221, 2274, 2869, 4210 |
| SfaNI | GCATC | 9 cut(s) | 144, 370, 909, 1279, 1301, 2590, 2771, 3093, 3100 |
| SfcI | CTRYAG | 4 cut(s) | 1559, 2476, 3231, 3857 |
| Sfr274I | CTCGAG | 3 cut(s) | 798, 3879, 4094 |
| SinI | GGWCC | 3 cut(s) | 73, 709, 879 |
| SlaI | CTCGAG | 3 cut(s) | 798, 3879, 4094 |
| SmiI | ATTTAAAT | 1 cut(s) | 2487 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 2001, 2757, 3038, 3134 |
| SseBI | AGGCCT | 2 cut(s) | 1362, 1629 |
| SsiI | CCGC | 9 cut(s) | 102, 105, 186, 220, 1689, 1813, 1864, 3176, 3642 |
| StuI | AGGCCT | 2 cut(s) | 1362, 1629 |
| StyD4I | CCNGG | 8 cut(s) | 69, 255, 371, 1119, 1417, 1426, 1581, 2812 |
| StyI | CCWWGG | 1 cut(s) | 925 |
| SwaI | ATTTAAAT | 1 cut(s) | 2487 |
| TaaI | ACNGT | 9 cut(s) | 346, 560, 569, 1017, 2528, 3064, 3160, 3316, 4351 |
| TaiI | ACGT | 5 cut(s) | 197, 255, 765, 1226, 1252 |
| TaqI | TCGA | 8 cut(s) | 213, 799, 906, 1645, 1774, 3771, 3880, 4095 |
| TaqII | GACCGA | 2 cut(s) | 867, 3878 |
| TatI | WGTACW | 6 cut(s) | 594, 2501, 2528, 2707, 2945, 3523 |
| TauI | GCSGC | 2 cut(s) | 107, 1816 |
| TscAI | CASTG | 7 cut(s) | 295, 565, 1558, 1563, 2293, 2521, 2908 |
| TseFI | GTSAC | 2 cut(s) | 1101, 1786 |
| Tsp45I | GTSAC | 2 cut(s) | 1101, 1786 |
| TspGWI | ACGGA | 5 cut(s) | 1104, 1736, 2072, 2576, 3322 |
| TspRI | CASTG | 7 cut(s) | 295, 565, 1558, 1563, 2293, 2521, 2908 |
| Tth111I | GACNNNGTC | 2 cut(s) | 71, 196 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 4237 |
| Vha464I | CTTAAG | 2 cut(s) | 1334, 2408 |
| VpaK11BI | GGWCC | 3 cut(s) | 73, 709, 879 |
| VspI | ATTAAT | 1 cut(s) | 2280 |
| XbaI | TCTAGA | 2 cut(s) | 2213, 4312 |
| XceI | RCATGY | 3 cut(s) | 484, 900, 2859 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 503, 524 |
| XhoI | CTCGAG | 3 cut(s) | 798, 3879, 4094 |
| XmiI | GTMKAC | 1 cut(s) | 3616 |
| XmnI | GAANNNNTTC | 5 cut(s) | 693, 2039, 3723, 4287, 4308 |
| ZraI | GACGTC | 1 cut(s) | 195 |
| ZrmI | AGTACT | 5 cut(s) | 596, 2503, 2530, 2709, 3525 |
| Zsp2I | ATGCAT | 5 cut(s) | 902, 1294, 1938, 2601, 3108 |