Rroxscaffold_1G00032440
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
46395613 .. 46406158
10546 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00032440.1

Sequence Viewer

Length: 4425 bp
ATGCCTTTCATTTCAGACACGGCGAGCGCCCTCAAGAGCCGGTTCGGGTTCCACGACCACTCTTCCGACCCGGTCCGGAGCACTCCGGATCTTCACAAATCCGCCGCCAAAGGGAGTTTCTCGGCGCTGAGGAGCATCGGCGACTGGGACGACGACCACGACGACGACGATGACGGGAAAGTCAGCACCGCTACGACGTCTTCCAGCCAGAGCTTCGAGTTCCGCGAAGACCCCTCGTTCTGGAAAGATCACAACGTCCAGGTTATTATTCGGGTTCGTCCACTTAGTAGCACTGAAATATCTGTGCAAGGCTATGGCAAATGCGTTCGTCAAGATAGCTGTCAGACCGTTACTTGGACCGGGCCTCCAGAGTCCCGGTTTACATTTGACATTGTTGCAGATGAGAATGTTACGCAGGAGCAGTTATTCAAAGTGGCAGGATTGCCGATGGTGGACAACTGCATGATAGGCTACAATAGTTGCATGTTTGCTTATGGCCAAACCGGAAGTGGGAAGACCCACACAATGCTTGGAGATATTGAGGGAGGCACACGAAGACACAGTGTCAACTGTGGGATGACGCCTAGAGTCTTTGAGTACTTATTCTCAAGAATTCAAAAGGAAAAAGAGGCAGGCAGAGATGAAAAGCTAAAGTTCATATGTAAATGCTCATTTTTAGAGATATACAATGAACAGATTCTGGATCTTTTGGACCCGTCGTCTAACAACTTGCAGATAAGAGAAGACATAAAGAAAGGGGTTTACGTGGAAAATCTCAAGGAGGTTGAAGTTACAAGTGCTCGAGATGTTATCCAACAACTTATTCAAGGTGCAGCTAACAGAAAGGTTGCTGCTACTAATATGAATCGTGCCAGTAGTCGGTCCCATAGTGTATTCACATGCATCATCGAAAGTAAAAGAGAATGCCAAGGAGTAACTCACCATCGGTTTGCTCGGCTTAATCTTGTTGACTTAGCAGGATCTGAAAGGCAGAAGAGTTCTGGTGCTGAAGGTGAACGGTTGAAGGAAGCTACTAATATCAACAAGTCTCTTTCAACATTGGGACTTGTGATTATGAATCTAGTAAATATGTCCAATGGGAAGTCACTCCATGTTCCGTACCGGGATTCAAAGCTAACATTTTTGCTTCAGGATTCTCTCGGTGGGAATTCCAAGACAATTATAATAGCAAATATCAGTCCTTCGAGCTGTTGTTCATTGGAGACATTGAGCACTTTGAAGTTTGCACAACGTGCTAAATTCATTAAGAACAATGCAATTGTGAATGAGGATGCATCTGGAGATGTTATTGCGATGAGAGTGCAAATTCATCAGCTTAAGGTTGCATGCTTAATCTTATCTCTGTGCCCCATTGGGAGATACTCTTTATGTATTGTAATGAAAGAAGTATCCCACTTACGAGGCCTTGTGGGTGGAGGCATTGAAAATCAGGACAATGAAACTTTGGCTGTAAGCTTTCCAGGATCTCCTGGATCTTTTAAGTGGGATGGACATGGATCCTTTAGTCCACTTGCTTCTGGTAAAAGAATATCTCAGAAAAAGGACTATGAAGTTGCTCTTGTTGGGGCTTTCAGGAGGGAAAAGGACAAAGACACTGCACTGCAGGCGTTGGCTTCTGAATGCCAGGCAGCTATGAAGCTAGCCAAACAAAGAGAAGATGAAATACAGGGCCTGAAGATGAGGCTTCGATTTCGAGAGGCTGGCATAAAAAGGTTGGAAGTGGTTGCCAGTGGAAAGATCTCTGCTGAGACACACTTACTAACGGAAAAGGAGGAACATTTGAAGGAAATAGAGGTATTGCGTTCTCAGGTTGATCGAAGCCAAGAAGTGACTAGATTTGCTATGGAAAATTTGCGGCTAAAGGAAGAAATCAGAAGGTTAAAGTCATTTTATGAAGAAGGTGAGCGGGAGATAATGAATGAACAAATAATGGTGCTACAGAACAAGTTGCTAGAAGCTCTCGATTGGAAACTTATGCATGAATCAGAGCCCTCCATGATTCAGAATACAAATCCAGATGTGCCAATGGAAGCTCAGCATGATGATGATGATGATTTTCTGAACTCCAAACAGGAGAAAGCATTCCATTGGCAATCTTCAATCAATGAGGAGAATGAATTTCTCCGTATGCAGGCCATTCAAAACCAATCAGAAATTGATACGCTTCATAGACAGCTTGAAGTCTGCCTTGAAGAGAAAGGGAATTTGGAAAGGAATGTCAATGATTTGATGACAAAACTTGAAGAAGAGACATCTAGAGCCCTGAAAGAAAACACAAATCAAGTTGAGCTTCCTTCCTTGTTATCTGATATGCCCATCATTAATTTCAGTGATCAAATGGAGCTAAAAACAATGGTTGACGCAATTGCTGCTGCAAGTCAGAGAGAGGCTGAGGCTCATGAGACAGCGATAACCCTGTCTAAAGAGAATGATGAACTGCGAAAGAAGCTTAAGGTTTTGATTGAAGATAATAACAAGCTCATTGAATTATATGAAGGGGCCACTTCGGAGAGTAACTACAGAAATTTAAATAAGTCTGAAAGTACTCATGATGGCAATGAAACTCACAGTAATGGTGGTTTTGTTGAACTTGCTAACGCAACGGAGGTTAAGAACTTGAAGCATCAGCTTGTGGAAATGCATGAAGAAAATGAAAAACTTTTGGGTTTATATGAAAGAGCTATGCAGGAGAGGGATGAATTCAAAAGGGTGCTTTCTTCCTGTGGACAGAAAAGAGTTGATGATAAAGTACTTGAATCCCCAGAGAAGCTTGTTGAAGTTGATGGAGGGAAACACATAAGAGCGTCTCCTACAGCTGTTGACGGGAGGAATTTTATTATTGAAGATGGTATTCCTGGTTCTGATGGAGGAGAAAGTCCTCAGTTTGGGATACCTACATGTCAAGGAGCACTCTCAATTCAGGAATCTGGTCTGTCCGGATTCACCGCACAAGATGGACATCATACATCTGATGAAGTGAAAATGTGTACTGAAGAAAGTGGTGGCTCAAGATTCGTTGTGCATGATACTGAAATAAATTTAGGAAATGAGGTTGGTGTGGGAATTAAGTCTGGCATGGAGATGGAGACACCATATCTCACTACTGTCAAGAATACTGAAGCAACAACCTATACTGAAAGATTCATGATGCATGATGCTGGAACTCAGTCTGACATGGAAATGGAGACACCAAATTTCACTACTGTCAATAATACTGAAGCGGAAGTTGATTTTGGAACTCAGTCTGATATGAAGCTGGAGACACCATCTCTTACTACAGCAAAGCTTTCAGAGGATCTAAATTTGGTCAGAAAGAAACTGGAAAGAGCAGATGAACAACTTGTAGATTCTGCCCAAACTGTTGCTGCATTTTATTCCGTTGAGAAAGTAATACTAGAGGTTGGCACACTCTCAAGAGAAATTGATGTAATGGAAGATGAAATTCAGGTCAAGCAGCAGCAATTGGAATCCTATAAGCTTCTCGCTTCAAAAAAAGAAGAAGAAAGGACTCTAATTGACAAAAAGTTGTCAGCTCTCAAATACTCCTTGTCCAACTTCTCTTCATCAGTACTTTACTTTGAGCAACGAGAAGCTCGGGCAAGAGCAAAGGCAACTGCTTCATCATCTTATCTGGGCCAAAAGAAAGGGGAATTCAGCTGTCTACAAGCGGAGAAGGATGAAATATCTGCTGCACAGAGAAAAATGCAAGAATCTGAAGTTGAATTAAAGAACATCCTTTCATGCTTGAAGTCAAAACTGGAGGAAGAAATTCAAAAACAACAGACTGGTCAGGTTCTCTTTGCAATAGATAATGTTGAAAGGATAGATACCTCACAGAAACATTGGCAGTTGGGAGGTAAAGCTACTGAGTTACTGAAGTCTGAGGAAGAGAAAACCAAGCTGCAGACCGAGATGAAGCTATCTCGAGAAAAACTTGGTGCTTTAATAAAGGAACTTGAGGAGTTGAACAGGAAATCTGAAAAGGTAGAAAGTAAGATGTTGGCTGTTCAGGTGGAGATACAGAAAGGTTTGAGGTCTGTGGAAGAGACAGAACTTCACCTTCAGGGTGTAATTAAGGAGAAGGAGATGCTGTTGGAAGTAAGAGATAATGGAAAGAGTGAAATCGAAAGTCTGATACTCGAGTACCAGCAGCATTGGTTTGAATCAGATTTGAAGGAGGGAGAGATGGAGATTTTGGAGGAGGAGTTGCAGATTGAGTTAAAGAAGATGGATGACCTTCGTATATCAAGGGCTCTTGCAGCTGAGAAGACAAACCAGTTCTTAGACGCGAGATCTAATTCATGTTTCTTATCAGAAAAGATGGAAGAAGAGCTTCAAAGTGTTAGGGAATATGTTCTAGAGGCCAAGTCATTGCTAGGGGAGGAAAATTCAACCGTCAGTTGA

Protein Analysis

1474

Amino Acids

165.99

Weight (kDa)

5.13

Isoelectric Point (pI)

45.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Microtub_bd PF16796 85 - 237 4.1e-20 Microtubule binding
Kinesin PF00225 91 - 421 2.9e-112 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011008)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1184
AasI GACNNNNNNGTC 1 cut(s) 179
AatII GACGTC 1 cut(s) 200
AccBSI CCGCTC 1 cut(s) 1927
AccI GTMKAC 1 cut(s) 3682
AccII CGCG 2 cut(s) 225, 4310
AccIII TCCGGA 3 cut(s) 75, 85, 2957
AciI CCGC 9 cut(s) 102, 105, 189, 223, 1876, 1927, 2967, 3242, 3689
AclWI GGATC 8 cut(s) 96, 711, 988, 1492, 1501, 1512, 1525, 3324
AcoI YGGCCR 1 cut(s) 496
AcuI CTGAAG 9 cut(s) 1029, 1133, 1715, 3033, 3159, 3258, 3756, 3917, 4067
AcyI GRCGYC 2 cut(s) 197, 581
AdeI CACNNNGTG 1 cut(s) 1253
AfaI GTAC 7 cut(s) 599, 1121, 2566, 2772, 3010, 3591, 4166
AfiI CCNNNNNNNGG 7 cut(s) 111, 240, 354, 510, 879, 2152, 2906
AflII CTTAAG 2 cut(s) 1337, 2471
AflIII ACRYGT 1 cut(s) 2918
AhdI GACNNNNNGTC 2 cut(s) 563, 718
AjnI CCWGG 5 cut(s) 258, 1480, 1489, 1644, 2875
AjuI GAANNNNNNNTTGG 8 cut(s) 101, 133, 807, 839, 2210, 2242, 3237, 3269
Alw21I GWGCWC 4 cut(s) 83, 802, 1235, 2932
AlwI GGATC 8 cut(s) 96, 711, 988, 1492, 1501, 1512, 1525, 3324
AlwNI CAGNNNCTG 3 cut(s) 700, 983, 1693
Ama87I CYCGRG 4 cut(s) 801, 3615, 3945, 4160
Aor13HI TCCGGA 3 cut(s) 75, 85, 2957
AoxI GGCC 8 cut(s) 362, 496, 1423, 1690, 2154, 2520, 3655, 4383
AseI ATTAAT 1 cut(s) 2343
Asp700I GAANNNNTTC 5 cut(s) 696, 2102, 3789, 4353, 4374
AspLEI GCGC 2 cut(s) 29, 127
AspS9I GGNCC 8 cut(s) 73, 357, 362, 712, 882, 1690, 2520, 3655
AsuC2I CCSGG 4 cut(s) 71, 361, 376, 1124
AsuHPI GGTGA 5 cut(s) 932, 1025, 1934, 2956, 4070
AsuNHI GCTAGC 1 cut(s) 1660
AvaI CYCGRG 4 cut(s) 801, 3615, 3945, 4160
AvaII GGWCC 4 cut(s) 73, 357, 712, 882
BaeGI GKGCMC 1 cut(s) 1370
BaeI ACNNNNGTAYC 4 cut(s) 4148, 4148, 4181, 4181
BalI TGGCCA 1 cut(s) 498
BamHI GGATCC 1 cut(s) 1517
BanII GRGCYC 3 cut(s) 2013, 2284, 4276
BarI GAAGNNNNNNTAC 2 cut(s) 1668, 1700
BbsI GAAGAC 6 cut(s) 192, 234, 521, 562, 750, 4295
Bbv12I GWGCWC 4 cut(s) 83, 802, 1235, 2932
BbvCI CCTCAGC 2 cut(s) 128, 2412
BceAI ACGGC 1 cut(s) 36
BcgI CGANNNNNNTGC 2 cut(s) 1303, 1337
BciT130I CCWGG 5 cut(s) 260, 1482, 1491, 1646, 2877
BciVI GTATCC 2 cut(s) 1420, 2904
BclI TGATCA 1 cut(s) 2353
BcnI CCSGG 4 cut(s) 71, 361, 376, 1124
BfaI CTAG 9 cut(s) 585, 1082, 1661, 1854, 1973, 2277, 3416, 4379, 4397
BfmI CTRYAG 6 cut(s) 1622, 1958, 2539, 2832, 3297, 3923
BfoI RGCGCY 2 cut(s) 30, 128
BfrI CTTAAG 2 cut(s) 1337, 2471
BfuI GTATCC 2 cut(s) 1420, 2904
BglII AGATCT 2 cut(s) 1758, 4313
BlpI GCTNAGC 1 cut(s) 2055
BmcAI AGTACT 4 cut(s) 599, 2566, 2772, 3591
Bme1390I CCNGG 9 cut(s) 71, 260, 361, 376, 1124, 1482, 1491, 1646, 2877
Bme18I GGWCC 4 cut(s) 73, 357, 712, 882
BmeRI GACNNNNNGTC 2 cut(s) 563, 718
BmeT110I CYCGRG 4 cut(s) 801, 3615, 3945, 4160
BmgT120I GGNCC 8 cut(s) 73, 357, 362, 712, 882, 1690, 2520, 3655
BmiI GGNNCC 5 cut(s) 50, 714, 884, 1519, 2521
BmrFI CCNGG 9 cut(s) 71, 260, 361, 376, 1124, 1482, 1491, 1646, 2877
BmrI ACTGGG 1 cut(s) 154
BmsI GCATC 8 cut(s) 144, 912, 1282, 1304, 2653, 3159, 3166, 4098
BmtI GCTAGC 1 cut(s) 1664
BmuI ACTGGG 1 cut(s) 154
BpiI GAAGAC 6 cut(s) 192, 234, 521, 562, 750, 4295
BpmI CTGGAG 4 cut(s) 351, 1320, 3299, 3800
Bpu10I CCTNAGC 2 cut(s) 128, 2412
Bpu1102I GCTNAGC 1 cut(s) 2055
BpuEI CTTGAG 6 cut(s) 17, 592, 761, 3013, 3418, 3998
BpuMI CCSGG 4 cut(s) 71, 361, 376, 1124
BsaAI YACGTR 1 cut(s) 766
BsaBI GATNNNNATC 1 cut(s) 2979
BsaHI GRCGYC 2 cut(s) 197, 581
BsaJI CCNNGG 1 cut(s) 928
BsaWI WCCGGW 4 cut(s) 75, 85, 503, 2957
BsaXI ACNNNNNCTCC 6 cut(s) 349, 379, 4097, 4127, 4211, 4241
Bsc4I CCNNNNNNNGG 7 cut(s) 111, 240, 354, 510, 879, 2152, 2906
Bse118I RCCGGY 1 cut(s) 39
Bse1I ACTGG 7 cut(s) 149, 873, 1749, 3345, 3783, 3811, 4297
Bse3DI GCAATG 2 cut(s) 2584, 4391
Bse8I GATNNNNATC 1 cut(s) 2979
BseAI TCCGGA 3 cut(s) 75, 85, 2957
BseBI CCWGG 5 cut(s) 260, 1482, 1491, 1646, 2877
BseDI CCNNGG 1 cut(s) 928
BseGI GGATG 7 cut(s) 582, 1297, 1513, 2722, 3703, 3753, 4258
BseJI GATNNNNATC 1 cut(s) 2979
BseLI CCNNNNNNNGG 7 cut(s) 111, 240, 354, 510, 879, 2152, 2906
BseMI GCAATG 2 cut(s) 2584, 4391
BseNI ACTGG 7 cut(s) 149, 873, 1749, 3345, 3783, 3811, 4297
BseRI GAGGAG 6 cut(s) 145, 2144, 2904, 3995, 4235, 4238
BseSI GKGCMC 1 cut(s) 1370
BsgI GTGCAG 3 cut(s) 852, 1602, 3696
Bsh1236I CGCG 2 cut(s) 225, 4310
BshFI GGCC 8 cut(s) 364, 498, 1425, 1692, 2156, 2522, 3657, 4385
BsiHKAI GWGCWC 4 cut(s) 83, 802, 1235, 2932
BsiHKCI CYCGRG 4 cut(s) 801, 3615, 3945, 4160
BsiSI CCGG 9 cut(s) 40, 71, 76, 86, 360, 376, 504, 1123, 2958
BslFI GGGAC 4 cut(s) 161, 358, 868, 1077
BslI CCNNNNNNNGG 7 cut(s) 111, 240, 354, 510, 879, 2152, 2906
BsmBI CGTCTC 1 cut(s) 2832
BsmFI GGGAC 4 cut(s) 161, 358, 868, 1077
BsmI GAATGC 3 cut(s) 929, 1646, 2102
BsnI GGCC 8 cut(s) 364, 498, 1425, 1692, 2156, 2522, 3657, 4385
BsoBI CYCGRG 4 cut(s) 801, 3615, 3945, 4160
Bsp1286I GDGCHC 8 cut(s) 83, 802, 1235, 1370, 2013, 2284, 2932, 4276
Bsp13I TCCGGA 3 cut(s) 75, 85, 2957
Bsp1720I GCTNAGC 1 cut(s) 2055
BspACI CCGC 9 cut(s) 102, 105, 189, 223, 1876, 1927, 2967, 3242, 3689
BspANI GGCC 8 cut(s) 364, 498, 1425, 1692, 2156, 2522, 3657, 4385
BspEI TCCGGA 3 cut(s) 75, 85, 2957
BspFNI CGCG 2 cut(s) 225, 4310
BspHI TCATGA 3 cut(s) 2419, 2569, 3165
BspLI GGNNCC 5 cut(s) 50, 714, 884, 1519, 2521
BspMAI CTGCAG 2 cut(s) 1626, 3927
BspOI GCTAGC 1 cut(s) 1664
BspPI GGATC 8 cut(s) 96, 711, 988, 1492, 1501, 1512, 1525, 3324
BspQI GCTCTTC 1 cut(s) 4344
BspTI CTTAAG 2 cut(s) 1337, 2471
BsrBI CCGCTC 1 cut(s) 1927
BsrDI GCAATG 2 cut(s) 2584, 4391
BsrFI RCCGGY 1 cut(s) 39
BsrI ACTGG 7 cut(s) 149, 873, 1749, 3345, 3783, 3811, 4297
BssAI RCCGGY 1 cut(s) 39
BssECI CCNNGG 1 cut(s) 928
BssNI GRCGYC 2 cut(s) 197, 581
BssT1I CCWWGG 1 cut(s) 928
Bst2UI CCWGG 5 cut(s) 260, 1482, 1491, 1646, 2877
Bst4CI ACNGT 9 cut(s) 349, 563, 572, 1020, 2591, 3127, 3226, 3382, 4417
Bst6I CTCTTC 8 cut(s) 67, 989, 2208, 2262, 3586, 3903, 4059, 4344
BstACI GRCGYC 2 cut(s) 197, 581
BstAFI CTTAAG 2 cut(s) 1337, 2471
BstAPI GCANNNNNTGC 2 cut(s) 1253, 2390
BstBAI YACGTR 1 cut(s) 766
BstC8I GCNNGC 7 cut(s) 25, 634, 1348, 1626, 1662, 1723, 2154
BstF5I GGATG 7 cut(s) 582, 1297, 1513, 2722, 3703, 3753, 4258
BstFNI CGCG 2 cut(s) 225, 4310
BstH2I RGCGCY 2 cut(s) 30, 128
BstHHI GCGC 2 cut(s) 29, 127
BstMWI GCNNNNNNNGC 6 cut(s) 468, 1253, 1625, 2390, 2467, 4280
BstNI CCWGG 5 cut(s) 260, 1482, 1491, 1646, 2877
BstNSI RCATGY 4 cut(s) 487, 903, 1350, 2922
BstSCI CCNGG 9 cut(s) 69, 258, 359, 374, 1122, 1480, 1489, 1644, 2875
BstSFI CTRYAG 6 cut(s) 1622, 1958, 2539, 2832, 3297, 3923
BstSLI GKGCMC 1 cut(s) 1370
BstUI CGCG 2 cut(s) 225, 4310
BstV2I GAAGAC 6 cut(s) 192, 234, 521, 562, 750, 4295
BstX2I RGATCY 9 cut(s) 88, 703, 980, 1484, 1493, 1517, 1758, 3316, 4313
BstYI RGATCY 9 cut(s) 88, 703, 980, 1484, 1493, 1517, 1758, 3316, 4313
BsuI GTATCC 2 cut(s) 1420, 2904
BsuRI GGCC 8 cut(s) 364, 498, 1425, 1692, 2156, 2522, 3657, 4385
BtgZI GCGATG 1 cut(s) 1328
BtsCI GGATG 7 cut(s) 582, 1297, 1513, 2722, 3703, 3753, 4258
BtsI GCAGTG 2 cut(s) 1614, 1619
BtsIMutI CAGTG 6 cut(s) 291, 568, 1614, 1619, 1756, 2356
Cac8I GCNNGC 7 cut(s) 25, 634, 1348, 1626, 1662, 1723, 2154
CaiI CAGNNNCTG 3 cut(s) 700, 983, 1693
CciI TCATGA 3 cut(s) 2419, 2569, 3165
CfoI GCGC 2 cut(s) 29, 127
Cfr10I RCCGGY 1 cut(s) 39
Cfr13I GGNCC 8 cut(s) 73, 357, 362, 712, 882, 1690, 2520, 3655
CpoI CGGWCCG 1 cut(s) 73
CseI GACGC 4 cut(s) 589, 2390, 2814, 4316
Csp6I GTAC 7 cut(s) 598, 1120, 2565, 2771, 3009, 3590, 4165
CspI CGGWCCG 1 cut(s) 73
CviQI GTAC 7 cut(s) 598, 1120, 2565, 2771, 3009, 3590, 4165
DraI TTTAAA 1 cut(s) 2550
DraIII CACNNNGTG 1 cut(s) 1253
DrdI GACNNNNNNGTC 1 cut(s) 179
DriI GACNNNNNGTC 2 cut(s) 563, 718
DseDI GACNNNNNNGTC 1 cut(s) 179
EaeI YGGCCR 1 cut(s) 496
Eam1104I CTCTTC 8 cut(s) 67, 989, 2208, 2262, 3586, 3903, 4059, 4344
Eam1105I GACNNNNNGTC 2 cut(s) 563, 718
EarI CTCTTC 8 cut(s) 67, 989, 2208, 2262, 3586, 3903, 4059, 4344
EciI GGCGGA 1 cut(s) 91
Eco130I CCWWGG 1 cut(s) 928
Eco147I AGGCCT 1 cut(s) 1425
Eco24I GRGCYC 3 cut(s) 2013, 2284, 4276
Eco47I GGWCC 4 cut(s) 73, 357, 712, 882
Eco57I CTGAAG 9 cut(s) 1029, 1133, 1715, 3033, 3159, 3258, 3756, 3917, 4067
Eco88I CYCGRG 4 cut(s) 801, 3615, 3945, 4160
EcoO109I RGGNCCY 1 cut(s) 1690
EcoRI GAATTC 4 cut(s) 612, 1168, 2720, 3671
EcoRII CCWGG 5 cut(s) 258, 1480, 1489, 1644, 2875
EcoT14I CCWWGG 1 cut(s) 928
EcoT22I ATGCAT 5 cut(s) 905, 1297, 2001, 2664, 3174
EcoT38I GRGCYC 3 cut(s) 2013, 2284, 4276
ErhI CCWWGG 1 cut(s) 928
Esp3I CGTCTC 1 cut(s) 2832
FalI AAGNNNNNCTT 8 cut(s) 1563, 1595, 2193, 2225, 2295, 2327, 4338, 4370
FaqI GGGAC 4 cut(s) 161, 358, 868, 1077
FauI CCCGC 1 cut(s) 1920
FauNDI CATATG 1 cut(s) 659
FbaI TGATCA 1 cut(s) 2353
FblI GTMKAC 1 cut(s) 3682
FokI GGATG 7 cut(s) 589, 1304, 1520, 2729, 3710, 3740, 4265
FriOI GRGCYC 3 cut(s) 2013, 2284, 4276
FspBI CTAG 9 cut(s) 585, 1082, 1661, 1854, 1973, 2277, 3416, 4379, 4397
GlaI GCGC 2 cut(s) 28, 126
GsuI CTGGAG 4 cut(s) 351, 1320, 3299, 3800
HaeII RGCGCY 2 cut(s) 30, 128
HaeIII GGCC 8 cut(s) 364, 498, 1425, 1692, 2156, 2522, 3657, 4385
HapII CCGG 9 cut(s) 40, 71, 76, 86, 360, 376, 504, 1123, 2958
HgaI GACGC 4 cut(s) 589, 2390, 2814, 4316
HhaI GCGC 2 cut(s) 29, 127
Hin1I GRCGYC 2 cut(s) 197, 581
Hin6I GCGC 2 cut(s) 27, 125
HinP1I GCGC 2 cut(s) 27, 125
HincII GTYRAC 4 cut(s) 568, 970, 2380, 2842
HindII GTYRAC 4 cut(s) 568, 970, 2380, 2842
HindIII AAGCTT 5 cut(s) 1474, 2468, 2789, 3305, 3497
HpaII CCGG 9 cut(s) 40, 71, 76, 86, 360, 376, 504, 1123, 2958
HphI GGTGA 5 cut(s) 932, 1025, 1934, 2956, 4070
Hpy99I CGWCG 6 cut(s) 155, 164, 167, 170, 199, 721
HpyCH4III ACNGT 9 cut(s) 349, 563, 572, 1020, 2591, 3127, 3226, 3382, 4417
HpyCH4IV ACGT 4 cut(s) 197, 255, 765, 1252
HpyF10VI GCNNNNNNNGC 6 cut(s) 468, 1253, 1625, 2390, 2467, 4280
HpySE526I ACGT 4 cut(s) 197, 255, 765, 1252
Hsp92I GRCGYC 2 cut(s) 197, 581
HspAI GCGC 2 cut(s) 27, 125
Kpn2I TCCGGA 3 cut(s) 75, 85, 2957
Ksp22I TGATCA 1 cut(s) 2353
LguI GCTCTTC 1 cut(s) 4344
LmnI GCTCC 5 cut(s) 78, 132, 418, 2362, 2927
LweI GCATC 8 cut(s) 144, 912, 1282, 1304, 2653, 3159, 3166, 4098
MaeI CTAG 9 cut(s) 585, 1082, 1661, 1854, 1973, 2277, 3416, 4379, 4397
MaeII ACGT 4 cut(s) 197, 255, 765, 1252
MaeIII GTNAC 8 cut(s) 349, 409, 790, 934, 1104, 1849, 2534, 3891
MbiI CCGCTC 1 cut(s) 1927
MfeI CAATTG 3 cut(s) 1278, 2385, 3482
MflI RGATCY 9 cut(s) 88, 703, 980, 1484, 1493, 1517, 1758, 3316, 4313
MhlI GDGCHC 8 cut(s) 83, 802, 1235, 1370, 2013, 2284, 2932, 4276
MlsI TGGCCA 1 cut(s) 498
MluNI TGGCCA 1 cut(s) 498
MlyI GAGTC 3 cut(s) 380, 597, 3523
MmeI TCCRAC 5 cut(s) 90, 838, 1716, 3597, 4095
Mox20I TGGCCA 1 cut(s) 498
Mph1103I ATGCAT 5 cut(s) 905, 1297, 2001, 2664, 3174
MroI TCCGGA 3 cut(s) 75, 85, 2957
MroXI GAANNNNTTC 5 cut(s) 696, 2102, 3789, 4353, 4374
MscI TGGCCA 1 cut(s) 498
MslI CAYNNNNRTG 4 cut(s) 2064, 2592, 3101, 3200
Msp20I TGGCCA 1 cut(s) 498
MspA1I CMGCKG 3 cut(s) 2837, 3678, 4283
MspCI CTTAAG 2 cut(s) 1337, 2471
MspI CCGG 9 cut(s) 40, 71, 76, 86, 360, 376, 504, 1123, 2958
MspR9I CCNGG 9 cut(s) 71, 260, 361, 376, 1124, 1482, 1491, 1646, 2877
MunI CAATTG 3 cut(s) 1278, 2385, 3482
Mva1269I GAATGC 3 cut(s) 929, 1646, 2102
MvaI CCWGG 5 cut(s) 260, 1482, 1491, 1646, 2877
MvnI CGCG 2 cut(s) 225, 4310
MwoI GCNNNNNNNGC 6 cut(s) 468, 1253, 1625, 2390, 2467, 4280
NciI CCSGG 4 cut(s) 71, 361, 376, 1124
NdeI CATATG 1 cut(s) 659
NheI GCTAGC 1 cut(s) 1660
NlaIV GGNNCC 5 cut(s) 50, 714, 884, 1519, 2521
NmeAIII GCCGAG 2 cut(s) 101, 934
NmuCI GTSAC 2 cut(s) 1104, 1849
NsiI ATGCAT 5 cut(s) 905, 1297, 2001, 2664, 3174
NspI RCATGY 4 cut(s) 487, 903, 1350, 2922
PaeI GCATGC 1 cut(s) 1350
PaeR7I CTCGAG 3 cut(s) 801, 3945, 4160
PagI TCATGA 3 cut(s) 2419, 2569, 3165
PceI AGGCCT 1 cut(s) 1425
PciI ACATGT 1 cut(s) 2918
PciSI GCTCTTC 1 cut(s) 4344
PcsI WCGNNNNNNNCGW 5 cut(s) 51, 156, 159, 165, 222
PctI GAATGC 3 cut(s) 929, 1646, 2102
PdmI GAANNNNTTC 5 cut(s) 696, 2102, 3789, 4353, 4374
PflFI GACNNNGTC 1 cut(s) 71
PfoI TCCNGGA 2 cut(s) 1480, 1489
PleI GAGTC 3 cut(s) 379, 596, 3523
PpsI GAGTC 3 cut(s) 379, 596, 3523
Ppu21I YACGTR 1 cut(s) 766
PscI ACATGT 1 cut(s) 2918
PshBI ATTAAT 1 cut(s) 2343
PsiI TTATAA 1 cut(s) 1184
Psp6I CCWGG 5 cut(s) 258, 1480, 1489, 1644, 2875
PspGI CCWGG 5 cut(s) 258, 1480, 1489, 1644, 2875
PspN4I GGNNCC 5 cut(s) 50, 714, 884, 1519, 2521
PspPI GGNCC 8 cut(s) 73, 357, 362, 712, 882, 1690, 2520, 3655
PspXI VCTCGAGB 1 cut(s) 4160
PsrI GAACNNNNNNTAC 2 cut(s) 2863, 2895
PstI CTGCAG 2 cut(s) 1626, 3927
PstNI CAGNNNCTG 3 cut(s) 700, 983, 1693
PsuI RGATCY 9 cut(s) 88, 703, 980, 1484, 1493, 1517, 1758, 3316, 4313
PsyI GACNNNGTC 1 cut(s) 71
PvuII CAGCTG 3 cut(s) 2837, 3678, 4283
RsaI GTAC 7 cut(s) 599, 1121, 2566, 2772, 3010, 3591, 4166
RsaNI GTAC 7 cut(s) 598, 1120, 2565, 2771, 3009, 3590, 4165
RseI CAYNNNNRTG 4 cut(s) 2064, 2592, 3101, 3200
Rsr2I CGGWCCG 1 cut(s) 73
RsrII CGGWCCG 1 cut(s) 73
SapI GCTCTTC 1 cut(s) 4344
Sau96I GGNCC 8 cut(s) 73, 357, 362, 712, 882, 1690, 2520, 3655
ScaI AGTACT 4 cut(s) 599, 2566, 2772, 3591
SchI GAGTC 3 cut(s) 380, 597, 3523
ScrFI CCNGG 9 cut(s) 71, 260, 361, 376, 1124, 1482, 1491, 1646, 2877
SduI GDGCHC 8 cut(s) 83, 802, 1235, 1370, 2013, 2284, 2932, 4276
SfaNI GCATC 8 cut(s) 144, 912, 1282, 1304, 2653, 3159, 3166, 4098
SfcI CTRYAG 6 cut(s) 1622, 1958, 2539, 2832, 3297, 3923
Sfr274I CTCGAG 3 cut(s) 801, 3945, 4160
SinI GGWCC 4 cut(s) 73, 357, 712, 882
SlaI CTCGAG 3 cut(s) 801, 3945, 4160
SmiI ATTTAAAT 1 cut(s) 2550
SmiMI CAYNNNNRTG 4 cut(s) 2064, 2592, 3101, 3200
SphI GCATGC 1 cut(s) 1350
SseBI AGGCCT 1 cut(s) 1425
SsiI CCGC 9 cut(s) 102, 105, 189, 223, 1876, 1927, 2967, 3242, 3689
SspMI CTAG 9 cut(s) 585, 1082, 1661, 1854, 1973, 2277, 3416, 4379, 4397
StuI AGGCCT 1 cut(s) 1425
StyD4I CCNGG 9 cut(s) 69, 258, 359, 374, 1122, 1480, 1489, 1644, 2875
StyI CCWWGG 1 cut(s) 928
SwaI ATTTAAAT 1 cut(s) 2550
TaaI ACNGT 9 cut(s) 349, 563, 572, 1020, 2591, 3127, 3226, 3382, 4417
TaiI ACGT 4 cut(s) 200, 258, 768, 1255
TaqII GACCGA 2 cut(s) 870, 3944
TatI WGTACW 5 cut(s) 597, 2564, 2770, 3008, 3589
TauI GCSGC 2 cut(s) 107, 1879
TscAI CASTG 6 cut(s) 298, 568, 1621, 1626, 1756, 2356
TseFI GTSAC 2 cut(s) 1104, 1849
Tsp45I GTSAC 2 cut(s) 1104, 1849
TspGWI ACGGA 5 cut(s) 1107, 1799, 2135, 2639, 3388
TspRI CASTG 6 cut(s) 298, 568, 1621, 1626, 1756, 2356
Tth111I GACNNNGTC 1 cut(s) 71
Vha464I CTTAAG 2 cut(s) 1337, 2471
VpaK11BI GGWCC 4 cut(s) 73, 357, 712, 882
VspI ATTAAT 1 cut(s) 2343
XbaI TCTAGA 2 cut(s) 2276, 4378
XceI RCATGY 4 cut(s) 487, 903, 1350, 2922
XcmI CCANNNNNNNNNTGG 2 cut(s) 506, 527
XhoI CTCGAG 3 cut(s) 801, 3945, 4160
XmiI GTMKAC 1 cut(s) 3682
XmnI GAANNNNTTC 5 cut(s) 696, 2102, 3789, 4353, 4374
XspI CTAG 9 cut(s) 585, 1082, 1661, 1854, 1973, 2277, 3416, 4379, 4397
ZraI GACGTC 1 cut(s) 198
ZrmI AGTACT 4 cut(s) 599, 2566, 2772, 3591
Zsp2I ATGCAT 5 cut(s) 905, 1297, 2001, 2664, 3174
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.