Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0012976

Physical Location & Seq

Genomic Coordinates Reverse (-)

16245756 .. 16250739

Gene Structure 4984 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g14880.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2760 bp

ATGGAGGAGGCCACGGAGGCTAAGAAGGCTGACACTGCTGGGTTCAACAAGCGAAGAGCTGAGGGCAACGACAAGAATGATAGGCCGAAGAAGAACCTTCAGCGGAAAGTGCGCTCCCTTAATCCCATCAATACCCTATCTTATGTGCAGATACTAGGGACTGGAATGGATACTCATGATACATCTTCTTCAGTGTTGCTATTCTTTGACAAACAGAGATTTATATTTAATGCTGGAGAGGGTTTGCAAAGGTTCTGCACAGAACATAAGATTAAGTTGTCAAAGATTGATCACATTTTTCTCTCTCGCGTCTGCTCAGAGACTGCAGGTGGACTTCCAGGTTTGCTGTTAACTTTGGCTGGCATGGGTGAAGAAGGAATGTCTGTCAATGTATGGGGTCCGTCAGATCTCAAGTATTTGGTAGATGCCATGAGGTGTTTCATCCCAAATGCTGCCATGGTTCACACTCGGAGCTTTGGGCCGACTCTCGGTTCTGTGGGGGGTTTTATGGATGATCAAACTAAGTTTAAAGAGCCGATTGTTCTTGTTGATGATGAGGTTGTCAAAATATCAGCCATTCTTCTACTCCCAAATTTCTCAAAAGGGACTCGACTCCCAAATGAAGTAACCAGTACACAGAATCCGACAGAAAAGGTTCTTGATGATAGGATGGATCATGCTTCACAACCCTTTAGACTAAATGGCAACAGTAGACCTAATGCAAAGCCTGGTGACATGTCTGTCGTTTACATCTGTGAATTACCTGAGATTAAAGGGAAATTTGACCCTGAAAAGGCTAAGGCTTTGGGTCTTAAACCAGGGTCAAAATATCGGGAACTGCAACTTGGAAATTCTGTAAACTCAGATTTTCAAAATATCACGGTTCATCCAAGTGATGTAATGGAACCCTCCATTCCTGGTCCGATTGTATTACTTGTAGACTGCCCAACGGAATCTCATTTGGAGGAGCTGGTATCCATAAAATGTCTCAGTCGCTATTATGTGGATTTCTCAGGCCCGCCTGAGAATGCTAAGGGCGTGACTTGTGTCATTCATTTGGGTCCTGCATCTCTAATTAGCAGTCCGAACTACCAGAGCTGGATGAAGAGATTTGGTTTAGCCCAACATATCATGGCTGGGAATGAAAGGAAGAATGTGGAGATTCCAATCCTAAGAGCGAGTGCAAGAATTGCAGCTCGACTTAACTATCTATGTCCACAGTTCTTTCCAGCTCCAGGTTTTTGGTCTCTTCAGAACCTTGATTGTTTGGCACCAGAATCCACTGCTTCAAGTGAGGGTTCTGTTTCAAAGTCTTGTGAAAGCATTTCCGCTGAAAACCTCCTCAAGTTCACTTTGCGTCCATTTGCTCGTCTTGGATTAGATAGGTCCGTTATTCCAAGTCAAGTGGCTTCCTCAGACATCATTGATGAGTTAATTTCAGAGATTCCAGAGGTTGTAGACGCTGCCCATTGTGTTAGTCGGTTCTGGCACCAGTCTGCAGAAATAAACGGAGAGATAAGTTTAACTAAAGATGATGAAGTTTTGGTTGAAGAGCCATGGTATAATGAGAATACGCTTCCTAGTTGTTTGGAAAATATAAGGAGAGATGACTTGGAGATAGTTCTTTTAGGGACTGGATCATCTCAGCCATCTAAGTATCGCAATGTCACTTCTATCCATATCAATCTATTCTCCAAAGGAGGTTTACTTTTAGATTGCGGTGAAGGAACACTGGGACAGCTGAAAAGAAGATATGGTGTAGAAGGTGCTGATAATGCTGTGAGAGGTCTTAGCTGTATATGGATTTCTCATATTCATGCTGATCACCATACTGGGTTGGCAAGAATACTTACTCTACGACGTGATTTGTTGAAGGGGGTGCCTCATGAGCCATTACTTGTTGTTGGACCGAGAAAGCTTAAGTCCTTTTTGGATGCATACCAGAGACTCGAAGATTTAGATATGCAGTTCCTTGATTGTAAGCACACCACAGAAGCCTCTTTACTTGCTTTTGAGGGTGTTACTGAACTCAATAGGGACTACTCTTCTCCAGCAAGTCCAACCCGTTTTGAGGACATGAGCATTAAAAATACAGAGAGGCAATTAGCGGAGAGAGTTGATTCCACTCTATTTGCTAAAGGATCCCGTATGCAGAGCTATTGGAAGAGGCCGGGTAGTCCTATTGACAACAGTGTAGTTCCAATTGTAAAGAGCTTGCAAAAAGTGCTCAATGAAACTGGTTTGGAAGCCTTGATTAGTTTTCCTGTCATCCACTGTCCGCAGGCATTTGGTGTTGTCTTGCAAGCTTCAGAGAGATTGAATAGTGTTGGAAAAATGATTCCAGGTTGGAAGGTTGTATACTCAGGTGACACTAGGCCCTGTCCGGAACTTATAGACGCATCTCGTGGTGCAACAGTTCTAATACATGAGGCAAGTTATGACGCAACTTTTGAGGATGGCATGGTGGACGAGGCTGTAGCAAGAAACCATAGCACAACAAAGGAAGCCATAGAAGTTGGGAACTCTGCTGGAGTTTATCGTATCATCCTCACTCACTTCAGCCAGCGATATCCTAAAATCCCAGTACTTGATGATACACACATGCATAAGACATGCATTGGATTTGACATGATGAGTATTAACATTGCTGATTTGCCTGTGGCCCCAAAGGTACTTCCATACTTGAAACTGCTTTTTAGAGACGAGATGATTGTTGACGAGGAAGATGAGTTGATAGAGGCTGCAAGTGTGGCTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0000963 GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006399 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0031123 GO:0034414 GO:0034470 GO:0034641 GO:0034660 GO:0042779 GO:0042780 GO:0042781 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043628 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0072684 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0140053 GO:0140098 GO:1901360 GO:1905267

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

Lactamase_B_2 Lactamase_B_4

Protein Analysis

920

Amino Acids

101.65

Weight (kDa)

5.76

Isoelectric Point (pI)

44.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012976)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16260 AT3G16260 AT3G16260
fragaria_vesca	FvH4_6g31990 FvH4_6g31990
malus_domestica	MD03G1197500.v1.1
prunus_persica	Prupe.3G063700_v2.0.a1
pyrus_communis	pycom03g14880
rosa_chinensis	RchiOBHm_Chr2g0139581
rosa_laevigata	RLG00000019820
rosa_multiflora	Rmu_sc0003427.1_g000004
rosa_roxburghii	Rroxscaffold_2G00105380
rosa_rugosa	Rorug02G0358400
rosa_samantha	Rh2AG408300 Rh2BG418900 Rh2CG394300 Rh2DG428000
rosa_wichuraiana	Rw2G033530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	317
AasI	GACNNNNNNGTC	1 cut(s)	740
Acc36I	ACCTGC	1 cut(s)	317
AccB1I	GGYRCC	3 cut(s)	1270, 1488, 1879
AccI	GTMKAC	4 cut(s)	712, 939, 1458, 2358
AccII	CGCG	1 cut(s)	309
AccIII	TCCGGA	1 cut(s)	2383
AciI	CCGC	6 cut(s)	103, 1019, 1329, 1719, 2108, 2279
AclWI	GGATC	4 cut(s)	681, 1645, 2136, 2149
AcsI	RAATTY	3 cut(s)	592, 779, 850
AcuI	CTGAAG	5 cut(s)	83, 174, 1235, 2292, 2542
AfaI	GTAC	3 cut(s)	634, 2586, 2673
AfiI	CCNNNNNNNGG	4 cut(s)	488, 793, 1235, 2071
AflII	CTTAAG	1 cut(s)	1919
AflIII	ACRYGT	1 cut(s)	735
AgsI	TTSAA	8 cut(s)	46, 872, 1290, 1308, 1550, 1873, 2320, 2686
AjiI	CACGTC	1 cut(s)	1862
AjnI	CCWGG	6 cut(s)	337, 727, 817, 916, 1234, 2341
AjuI	GAANNNNNNNTTGG	2 cut(s)	828, 860
Alw21I	GWGCWC	1 cut(s)	2229
Alw26I	GTCTC	5 cut(s)	314, 992, 1251, 1939, 2694
AlwI	GGATC	4 cut(s)	681, 1645, 2136, 2149
AlwNI	CAGNNNCTG	1 cut(s)	323
Aor13HI	TCCGGA	1 cut(s)	2383
AoxI	GGCC	7 cut(s)	9, 83, 479, 1015, 2168, 2375, 2661
ApeKI	GCWGC	4 cut(s)	452, 1193, 1463, 2741
ApoI	RAATTY	3 cut(s)	592, 779, 850
ArsI	GACNNNNNNTTYG	2 cut(s)	2432, 2464
Asp700I	GAANNNNTTC	1 cut(s)	654
AspLEI	GCGC	1 cut(s)	114
AspS9I	GGNCC	9 cut(s)	398, 479, 920, 1016, 1061, 1386, 1907, 2376, 2662
AsuC2I	CCSGG	1 cut(s)	2172
AsuHPI	GGTGA	5 cut(s)	380, 743, 1733, 1817, 2378
AvaII	GGWCC	5 cut(s)	398, 920, 1061, 1386, 1907
BamHI	GGATCC	1 cut(s)	2141
BanI	GGYRCC	3 cut(s)	1270, 1488, 1879
BarI	GAAGNNNNNNTAC	4 cut(s)	1986, 2018, 2342, 2374
BauI	CACGAG	1 cut(s)	2403
Bbv12I	GWGCWC	1 cut(s)	2229
BbvCI	CCTCAGC	1 cut(s)	60
BbvI	GCAGC	4 cut(s)	439, 1205, 1450, 2728
BccI	CCATC	4 cut(s)	134, 664, 1657, 2450
BciT130I	CCWGG	6 cut(s)	339, 729, 819, 918, 1236, 2343
BciVI	GTATCC	2 cut(s)	163, 985
BclI	TGATCA	3 cut(s)	289, 514, 1822
BcnI	CCSGG	1 cut(s)	2172
BcoDI	GTCTC	5 cut(s)	314, 992, 1251, 1939, 2694
BfaI	CTAG	3 cut(s)	155, 1581, 2373
BfmI	CTRYAG	3 cut(s)	324, 1497, 2475
BfrI	CTTAAG	1 cut(s)	1919
BfuAI	ACCTGC	1 cut(s)	317
BfuI	GTATCC	2 cut(s)	163, 985
BglI	GCCNNNNNGGC	1 cut(s)	17
BglII	AGATCT	1 cut(s)	406
BisI	GCNGC	4 cut(s)	453, 1194, 1464, 2742
BlsI	GCNGC	4 cut(s)	454, 1195, 1465, 2743
BmcAI	AGTACT	1 cut(s)	2586
Bme1390I	CCNGG	7 cut(s)	339, 729, 819, 918, 1236, 2172, 2343
Bme18I	GGWCC	5 cut(s)	398, 920, 1061, 1386, 1907
BmgBI	CACGTC	1 cut(s)	1862
BmgT120I	GGNCC	9 cut(s)	398, 479, 920, 1016, 1061, 1386, 1907, 2376, 2662
BmiI	GGNNCC	8 cut(s)	399, 906, 1062, 1272, 1490, 1881, 2143, 2664
BmrFI	CCNGG	7 cut(s)	339, 729, 819, 918, 1236, 2172, 2343
BmrI	ACTGGG	3 cut(s)	1742, 1842, 2576
BmsI	GCATC	4 cut(s)	415, 1076, 1924, 2408
BmuI	ACTGGG	3 cut(s)	1742, 1842, 2576
BoxI	GACNNNNGTC	1 cut(s)	1046
BpmI	CTGGAG	4 cut(s)	255, 1218, 2034, 2550
Bpu10I	CCTNAGC	3 cut(s)	60, 798, 1032
BpuEI	CTTGAG	2 cut(s)	395, 1328
BpuMI	CCSGG	1 cut(s)	2172
BsaBI	GATNNNNATC	1 cut(s)	1166
BsaI	GGTCTC	1 cut(s)	1251
BsaJI	CCNNGG	4 cut(s)	12, 456, 818, 1556
BsaWI	WCCGGW	1 cut(s)	2383
Bsc4I	CCNNNNNNNGG	4 cut(s)	488, 793, 1235, 2071
Bse1I	ACTGG	8 cut(s)	166, 630, 1492, 1639, 1737, 1837, 2242, 2582
Bse3DI	GCAATG	2 cut(s)	1669, 2643
Bse8I	GATNNNNATC	1 cut(s)	1166
BseAI	TCCGGA	1 cut(s)	2383
BseBI	CCWGG	6 cut(s)	339, 729, 819, 918, 1236, 2343
BseDI	CCNNGG	4 cut(s)	12, 456, 818, 1556
BseGI	GGATG	9 cut(s)	441, 517, 675, 886, 1107, 1939, 2268, 2461, 2544
BseJI	GATNNNNATC	1 cut(s)	1166
BseLI	CCNNNNNNNGG	4 cut(s)	488, 793, 1235, 2071
BseMI	GCAATG	2 cut(s)	1669, 2643
BseNI	ACTGG	8 cut(s)	166, 630, 1492, 1639, 1737, 1837, 2242, 2582
BseRI	GAGGAG	3 cut(s)	20, 980, 1331
BseXI	GCAGC	4 cut(s)	439, 1205, 1450, 2728
BseYI	CCCAGC	2 cut(s)	38, 1136
BsgI	GTGCAG	2 cut(s)	167, 241
Bsh1236I	CGCG	1 cut(s)	309
BshFI	GGCC	7 cut(s)	11, 85, 481, 1017, 2170, 2377, 2663
BshNI	GGYRCC	3 cut(s)	1270, 1488, 1879
BsiHKAI	GWGCWC	1 cut(s)	2229
BsiSI	CCGG	2 cut(s)	2171, 2384
BslFI	GGGAC	5 cut(s)	172, 619, 1645, 1749, 2051
BslI	CCNNNNNNNGG	4 cut(s)	488, 793, 1235, 2071
BsmAI	GTCTC	5 cut(s)	314, 992, 1251, 1939, 2694
BsmBI	CGTCTC	1 cut(s)	2694
BsmFI	GGGAC	5 cut(s)	172, 619, 1645, 1749, 2051
BsmI	GAATGC	1 cut(s)	1033
BsnI	GGCC	7 cut(s)	11, 85, 481, 1017, 2170, 2377, 2663
Bso31I	GGTCTC	1 cut(s)	1251
Bsp1286I	GDGCHC	1 cut(s)	2229
Bsp13I	TCCGGA	1 cut(s)	2383
Bsp143I	GATC	7 cut(s)	289, 406, 514, 673, 1637, 1822, 2141
Bsp19I	CCATGG	2 cut(s)	456, 1556
BspACI	CCGC	6 cut(s)	103, 1019, 1329, 1719, 2108, 2279
BspANI	GGCC	7 cut(s)	11, 85, 481, 1017, 2170, 2377, 2663
BspEI	TCCGGA	1 cut(s)	2383
BspFNI	CGCG	1 cut(s)	309
BspHI	TCATGA	2 cut(s)	175, 1885
BspLI	GGNNCC	8 cut(s)	399, 906, 1062, 1272, 1490, 1881, 2143, 2664
BspMAI	CTGCAG	2 cut(s)	328, 1501
BspMI	ACCTGC	1 cut(s)	317
BspPI	GGATC	4 cut(s)	681, 1645, 2136, 2149
BspQI	GCTCTTC	2 cut(s)	49, 1545
BspT107I	GGYRCC	3 cut(s)	1270, 1488, 1879
BspTI	CTTAAG	1 cut(s)	1919
BspTNI	GGTCTC	1 cut(s)	1251
BsrDI	GCAATG	2 cut(s)	1669, 2643
BsrI	ACTGG	8 cut(s)	166, 630, 1492, 1639, 1737, 1837, 2242, 2582
BssECI	CCNNGG	4 cut(s)	12, 456, 818, 1556
BssMI	GATC	7 cut(s)	289, 406, 514, 673, 1637, 1822, 2141
BssNAI	GTATAC	1 cut(s)	2359
BssSI	CACGAG	1 cut(s)	2403
BssT1I	CCWWGG	2 cut(s)	456, 1556
Bst1107I	GTATAC	1 cut(s)	2359
Bst2BI	CACGAG	1 cut(s)	2403
Bst2UI	CCWGG	6 cut(s)	339, 729, 819, 918, 1236, 2343
Bst4CI	ACNGT	6 cut(s)	710, 883, 1221, 2192, 2276, 2416
Bst6I	CTCTTC	6 cut(s)	49, 1100, 1254, 1545, 2050, 2159
BstAFI	CTTAAG	1 cut(s)	1919
BstAPI	GCANNNNNTGC	2 cut(s)	1190, 2224
BstC8I	GCNNGC	6 cut(s)	361, 1019, 2216, 2283, 2304, 2564
BstDSI	CCRYGG	3 cut(s)	12, 456, 1556
BstF5I	GGATG	9 cut(s)	441, 517, 675, 886, 1107, 1939, 2268, 2461, 2544
BstFNI	CGCG	1 cut(s)	309
BstHHI	GCGC	1 cut(s)	114
BstKTI	GATC	7 cut(s)	292, 409, 517, 676, 1640, 1825, 2144
BstMAI	GTCTC	5 cut(s)	314, 992, 1251, 1939, 2694
BstMBI	GATC	7 cut(s)	289, 406, 514, 673, 1637, 1822, 2141
BstMWI	GCNNNNNNNGC	9 cut(s)	17, 26, 35, 109, 1190, 1775, 1888, 2224, 2750
BstNI	CCWGG	6 cut(s)	339, 729, 819, 918, 1236, 2343
BstNSI	RCATGY	3 cut(s)	739, 2605, 2616
BstPAI	GACNNNNGTC	1 cut(s)	1046
BstSCI	CCNGG	7 cut(s)	337, 727, 817, 916, 1234, 2170, 2341
BstSFI	CTRYAG	3 cut(s)	324, 1497, 2475
BstUI	CGCG	1 cut(s)	309
BstV1I	GCAGC	4 cut(s)	439, 1205, 1450, 2728
BstX2I	RGATCY	2 cut(s)	406, 2141
BstXI	CCANNNNNNTGG	1 cut(s)	1242
BstYI	RGATCY	2 cut(s)	406, 2141
BstZ17I	GTATAC	1 cut(s)	2359
BsuI	GTATCC	2 cut(s)	163, 985
BsuRI	GGCC	7 cut(s)	11, 85, 481, 1017, 2170, 2377, 2663
BtgI	CCRYGG	3 cut(s)	12, 456, 1556
BtrI	CACGTC	1 cut(s)	1862
BtsCI	GGATG	9 cut(s)	441, 517, 675, 886, 1107, 1939, 2268, 2461, 2544
BtsI	GCAGTG	2 cut(s)	33, 1281
BtsIMutI	CAGTG	6 cut(s)	33, 198, 1281, 1730, 2197, 2272
BveI	ACCTGC	1 cut(s)	317
Cac8I	GCNNGC	6 cut(s)	361, 1019, 2216, 2283, 2304, 2564
CaiI	CAGNNNCTG	1 cut(s)	323
CciI	TCATGA	2 cut(s)	175, 1885
CfoI	GCGC	1 cut(s)	114
Cfr13I	GGNCC	9 cut(s)	398, 479, 920, 1016, 1061, 1386, 1907, 2376, 2662
CseI	GACGC	5 cut(s)	298, 1346, 1469, 2405, 2450
Csp6I	GTAC	3 cut(s)	633, 2585, 2672
CspCI	CAANNNNNGTGG	4 cut(s)	1386, 1421, 2113, 2148
CviQI	GTAC	3 cut(s)	633, 2585, 2672
DpnI	GATC	7 cut(s)	291, 408, 516, 675, 1639, 1824, 2143
DpnII	GATC	7 cut(s)	289, 406, 514, 673, 1637, 1822, 2141
DraI	TTTAAA	1 cut(s)	529
DrdI	GACNNNNNNGTC	1 cut(s)	740
DseDI	GACNNNNNNGTC	1 cut(s)	740
Eam1104I	CTCTTC	6 cut(s)	49, 1100, 1254, 1545, 2050, 2159
EarI	CTCTTC	6 cut(s)	49, 1100, 1254, 1545, 2050, 2159
Eco130I	CCWWGG	2 cut(s)	456, 1556
Eco31I	GGTCTC	1 cut(s)	1251
Eco32I	GATATC	1 cut(s)	2570
Eco47I	GGWCC	5 cut(s)	398, 920, 1061, 1386, 1907
Eco57I	CTGAAG	5 cut(s)	83, 174, 1235, 2292, 2542
EcoO109I	RGGNCCY	2 cut(s)	1061, 2376
EcoRII	CCWGG	6 cut(s)	337, 727, 817, 916, 1234, 2341
EcoRV	GATATC	1 cut(s)	2570
EcoT14I	CCWWGG	2 cut(s)	456, 1556
EcoT22I	ATGCAT	3 cut(s)	1939, 2607, 2618
ErhI	CCWWGG	2 cut(s)	456, 1556
Esp3I	CGTCTC	1 cut(s)	2694
FalI	AAGNNNNNCTT	1 cut(s)	2737
FaqI	GGGAC	5 cut(s)	172, 619, 1645, 1749, 2051
FauI	CCCGC	1 cut(s)	1026
FbaI	TGATCA	3 cut(s)	289, 514, 1822
FblI	GTMKAC	4 cut(s)	712, 939, 1458, 2358
Fnu4HI	GCNGC	4 cut(s)	453, 1194, 1464, 2742
FokI	GGATG	9 cut(s)	428, 524, 682, 873, 1114, 1946, 2255, 2468, 2531
Fsp4HI	GCNGC	4 cut(s)	453, 1194, 1464, 2742
FspBI	CTAG	3 cut(s)	155, 1581, 2373
GlaI	GCGC	1 cut(s)	113
GluI	GCNGC	4 cut(s)	453, 1194, 1464, 2742
GsaI	CCCAGC	2 cut(s)	42, 1140
GsuI	CTGGAG	4 cut(s)	255, 1218, 2034, 2550
HaeIII	GGCC	7 cut(s)	11, 85, 481, 1017, 2170, 2377, 2663
HapII	CCGG	2 cut(s)	2171, 2384
HgaI	GACGC	5 cut(s)	298, 1346, 1469, 2405, 2450
HhaI	GCGC	1 cut(s)	114
Hin6I	GCGC	1 cut(s)	112
HinP1I	GCGC	1 cut(s)	112
HincII	GTYRAC	2 cut(s)	351, 2716
HindII	GTYRAC	2 cut(s)	351, 2716
HindIII	AAGCTT	2 cut(s)	1916, 2304
HpaI	GTTAAC	1 cut(s)	351
HpaII	CCGG	2 cut(s)	2171, 2384
HphI	GGTGA	5 cut(s)	380, 743, 1733, 1817, 2378
Hpy188III	TCNNGA	7 cut(s)	176, 659, 833, 1448, 1886, 2384, 2757
Hpy99I	CGWCG	1 cut(s)	1863
HpyAV	CCTTC	7 cut(s)	19, 107, 368, 1718, 1757, 1867, 2344
HpyCH4III	ACNGT	6 cut(s)	710, 883, 1221, 2192, 2276, 2416
HpyCH4IV	ACGT	1 cut(s)	1861
HpyF10VI	GCNNNNNNNGC	9 cut(s)	17, 26, 35, 109, 1190, 1775, 1888, 2224, 2750
HpySE526I	ACGT	1 cut(s)	1861
HspAI	GCGC	1 cut(s)	112
Kpn2I	TCCGGA	1 cut(s)	2383
Ksp22I	TGATCA	3 cut(s)	289, 514, 1822
KspAI	GTTAAC	1 cut(s)	351
Kzo9I	GATC	7 cut(s)	289, 406, 514, 673, 1637, 1822, 2141
LguI	GCTCTTC	2 cut(s)	49, 1545
LmnI	GCTCC	4 cut(s)	119, 471, 967, 1237
Lsp1109I	GCAGC	4 cut(s)	439, 1205, 1450, 2728
LweI	GCATC	4 cut(s)	415, 1076, 1924, 2408
MaeI	CTAG	3 cut(s)	155, 1581, 2373
MaeII	ACGT	1 cut(s)	1861
MaeIII	GTNAC	6 cut(s)	625, 731, 1039, 1666, 2020, 2366
MalI	GATC	7 cut(s)	291, 408, 516, 675, 1639, 1824, 2143
MboI	GATC	7 cut(s)	289, 406, 514, 673, 1637, 1822, 2141
MfeI	CAATTG	1 cut(s)	2202
MflI	RGATCY	2 cut(s)	406, 2141
MhlI	GDGCHC	1 cut(s)	2229
MluCI	AATT	9 cut(s)	592, 758, 779, 850, 1074, 1188, 1434, 2102, 2202
MlyI	GAGTC	4 cut(s)	478, 601, 606, 1941
MmeI	TCCRAC	5 cut(s)	668, 1885, 2084, 2308, 2327
Mph1103I	ATGCAT	3 cut(s)	1939, 2607, 2618
MroI	TCCGGA	1 cut(s)	2383
MroXI	GAANNNNTTC	1 cut(s)	654
MslI	CAYNNNNRTG	2 cut(s)	891, 1815
MspA1I	CMGCKG	3 cut(s)	103, 1331, 1741
MspCI	CTTAAG	1 cut(s)	1919
MspI	CCGG	2 cut(s)	2171, 2384
MspR9I	CCNGG	7 cut(s)	339, 729, 819, 918, 1236, 2172, 2343
MunI	CAATTG	1 cut(s)	2202
Mva1269I	GAATGC	1 cut(s)	1033
MvaI	CCWGG	6 cut(s)	339, 729, 819, 918, 1236, 2343
MvnI	CGCG	1 cut(s)	309
MwoI	GCNNNNNNNGC	9 cut(s)	17, 26, 35, 109, 1190, 1775, 1888, 2224, 2750
NciI	CCSGG	1 cut(s)	2172
NcoI	CCATGG	2 cut(s)	456, 1556
NdeII	GATC	7 cut(s)	289, 406, 514, 673, 1637, 1822, 2141
NlaIV	GGNNCC	8 cut(s)	399, 906, 1062, 1272, 1490, 1881, 2143, 2664
NmuCI	GTSAC	4 cut(s)	731, 1039, 1666, 2366
NsiI	ATGCAT	3 cut(s)	1939, 2607, 2618
NspI	RCATGY	3 cut(s)	739, 2605, 2616
PagI	TCATGA	2 cut(s)	175, 1885
PaqCI	CACCTGC	1 cut(s)	317
PciI	ACATGT	1 cut(s)	735
PciSI	GCTCTTC	2 cut(s)	49, 1545
PctI	GAATGC	1 cut(s)	1033
PdmI	GAANNNNTTC	1 cut(s)	654
PfeI	GAWTC	7 cut(s)	640, 953, 1162, 1277, 1444, 2120, 2338
PkrI	GCNGC	4 cut(s)	454, 1195, 1465, 2743
PleI	GAGTC	4 cut(s)	478, 601, 606, 1941
PpsI	GAGTC	4 cut(s)	478, 601, 606, 1941
PpuMI	RGGWCCY	1 cut(s)	1061
PscI	ACATGT	1 cut(s)	735
PshAI	GACNNNNGTC	1 cut(s)	1046
Psp5II	RGGWCCY	1 cut(s)	1061
Psp6I	CCWGG	6 cut(s)	337, 727, 817, 916, 1234, 2341
PspFI	CCCAGC	2 cut(s)	38, 1136
PspGI	CCWGG	6 cut(s)	337, 727, 817, 916, 1234, 2341
PspN4I	GGNNCC	8 cut(s)	399, 906, 1062, 1272, 1490, 1881, 2143, 2664
PspPI	GGNCC	9 cut(s)	398, 479, 920, 1016, 1061, 1386, 1907, 2376, 2662
PspPPI	RGGWCCY	1 cut(s)	1061
PstI	CTGCAG	2 cut(s)	328, 1501
PstNI	CAGNNNCTG	1 cut(s)	323
PsuI	RGATCY	2 cut(s)	406, 2141
PvuII	CAGCTG	1 cut(s)	1741
RsaI	GTAC	3 cut(s)	634, 2586, 2673
RsaNI	GTAC	3 cut(s)	633, 2585, 2672
RseI	CAYNNNNRTG	2 cut(s)	891, 1815
SapI	GCTCTTC	2 cut(s)	49, 1545
SatI	GCNGC	4 cut(s)	453, 1194, 1464, 2742
Sau3AI	GATC	7 cut(s)	289, 406, 514, 673, 1637, 1822, 2141
Sau96I	GGNCC	9 cut(s)	398, 479, 920, 1016, 1061, 1386, 1907, 2376, 2662
ScaI	AGTACT	1 cut(s)	2586
SchI	GAGTC	4 cut(s)	478, 601, 606, 1941
ScrFI	CCNGG	7 cut(s)	339, 729, 819, 918, 1236, 2172, 2343
SduI	GDGCHC	1 cut(s)	2229
SfaNI	GCATC	4 cut(s)	415, 1076, 1924, 2408
SfcI	CTRYAG	3 cut(s)	324, 1497, 2475
SinI	GGWCC	5 cut(s)	398, 920, 1061, 1386, 1907
SmiMI	CAYNNNNRTG	2 cut(s)	891, 1815
SmlI	CTYRAG	3 cut(s)	410, 1343, 1919
SmoI	CTYRAG	3 cut(s)	410, 1343, 1919
Sse9I	AATT	9 cut(s)	592, 758, 779, 850, 1074, 1188, 1434, 2102, 2202
SsiI	CCGC	6 cut(s)	103, 1019, 1329, 1719, 2108, 2279
SspMI	CTAG	3 cut(s)	155, 1581, 2373
StyD4I	CCNGG	7 cut(s)	337, 727, 817, 916, 1234, 2170, 2341
StyI	CCWWGG	2 cut(s)	456, 1556
TaaI	ACNGT	6 cut(s)	710, 883, 1221, 2192, 2276, 2416
TaiI	ACGT	1 cut(s)	1864
TaqI	TCGA	3 cut(s)	610, 1198, 1950
TaqII	GACCGA	1 cut(s)	1924
TasI	AATT	9 cut(s)	592, 758, 779, 850, 1074, 1188, 1434, 2102, 2202
TatI	WGTACW	2 cut(s)	632, 2584
TfiI	GAWTC	7 cut(s)	640, 953, 1162, 1277, 1444, 2120, 2338
TscAI	CASTG	6 cut(s)	40, 198, 1288, 1737, 2197, 2279
TseFI	GTSAC	4 cut(s)	731, 1039, 1666, 2366
TseI	GCWGC	4 cut(s)	452, 1193, 1463, 2741
Tsp45I	GTSAC	4 cut(s)	731, 1039, 1666, 2366
TspDTI	ATGAA	9 cut(s)	430, 636, 875, 1043, 1118, 1158, 1551, 1805, 2247
TspGWI	ACGGA	5 cut(s)	29, 390, 965, 1378, 1524
TspRI	CASTG	6 cut(s)	40, 198, 1288, 1737, 2197, 2279
Vha464I	CTTAAG	1 cut(s)	1919
VpaK11BI	GGWCC	5 cut(s)	398, 920, 1061, 1386, 1907
XapI	RAATTY	3 cut(s)	592, 779, 850
XceI	RCATGY	3 cut(s)	739, 2605, 2616
XmiI	GTMKAC	4 cut(s)	712, 939, 1458, 2358
XmnI	GAANNNNTTC	1 cut(s)	654
XspI	CTAG	3 cut(s)	155, 1581, 2373
ZrmI	AGTACT	1 cut(s)	2586
Zsp2I	ATGCAT	3 cut(s)	1939, 2607, 2618

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.