Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0013190

Physical Location & Seq

Genomic Coordinates Reverse (-)

1258085 .. 1260930

Gene Structure 2846 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1626 bp

ATGAAGCCACCAATCCACATTACCAACCACATAACCATCCCAAAAGGACAAAATGGTATTTTCAGCAAATGCAGGCTCTATAAACCCCAATCGTCAGTTTGCCACCACCACCCCACAACCACCTCTCTCTCTATCTCTATCTCTCTCTCTATCTCTATCTGCCTCCGTTTTTCTTCCTCCTCCTCCTTTCTTCCTCTCCGATCCGTCCCCATGGAACCAGTAAACGCGTGGGGCAACTCCTCCCTCGAGAGCGTGGACCCCGAGATCCACGACCTCATCGAGAAGGAGAAGCGCCGCCAATGCCGAGGAATCGAGCTCATTGCCTCCGAAAACTTCACCTCCTTCGCCGTCATTGAGGCCCTCGGCAGCGCCCTCACCAACAAGTATTCCGAAGGCATGCCCGGCAACCGCTACTACGGAGGCAACGAGTTCATCGACGAGATCGAGAACTTGTGCCGCTCGCGCGCCCTCCAGGCCTTCCACCTCGACGCCGCCAAATGGGGTGTCAATGTTCAGCCCTACTCCGGTTCTCCCGCCAACTTCGCCGCCTACACCGCCGTCCTCGAGCCCCATGACCGCATCATGGGATTGGACCTTCCATCCGGCGGTCACCTGACCCACGGGTACTACACTTCCGGAGGGAAGAAGATCTCGGCGACCTCGATTTACTTCGAGAGTCTGCCGTACAAGGTCAATTCCTCAACTGGGTTCATCGATTACGACAAGTTGGAGGAGAAGGCCTTGGATTTCAGGCCAAAATTGATAATTTGCGGCGGCAGTGCGTACCCCAGGGACTGGGATTACGCAAGGTTCCGCGCCGTTGCGGATAAGTGCGGTGCTCTTTTGCTCTGCGACATGGCTCACATTAGCGGCCTTGTTGCTGCTCAGGAAGCTGCAAATCCCTTTGAGTACTGTGACATTGTCACAACCACAACCCACAAGAGCTTGAGGGGTCCTAGGGCTGGTATGATCTTCTACAGGAAGGGACCAAAACCACCCAAGAAGGGCCAGCCCGAGGGTGCAGTTTACGACTTTGAAGACAAGGTCAACTTTGCTGTTTTTCCCTCCCTTCAAGGTGGTCCTCACAATCACCAAATCGGTGCCCTAGCTGTTGCTCTTAAGCAGGCCATGACACCCGGGTTCAAGGCATACGCCATACAAGTCAAGGCCAACGCTGTTGCCCTCGGGAACTACCTGATGAGCAAGGATTACAAGCTTGTCACAGGAGGAACAGAGAACCACCTTGTTCTGTGGGATCTCAGGCCTCTTGGTTTGACCGGCAACAAGGTTGAGAAGCTTTGTGACCTGTGCAACATTACTGTGAACAAGAATGCTGTTTTTGGTGACAGCAGTGCCTTGGCTCCTGGAGGAGTAAGAATCGGTGCTCCGGCTATGACCTCAAGAGGTTTGGTTGAGAAGGATTTTGAGAAGATAGGGGAATTCCTTCACAGGGCCGTAACTCTCACCTTGAAAATCCAGAAGGAGCATGGAAAACTACTCAAGGACTTCAACAAGGGTTTGGTGAACAACAAGGACATTGAAGAACTCAAGGCTGATGTCGAGAAGTTCTCCGCCTCATTTGACATGCCCGGCTTCTCCTTGGCCGACATGAAGTACAAGGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000741 GO:0003674 GO:0003824 GO:0004372 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006730 GO:0006996 GO:0006997 GO:0007275 GO:0007623 GO:0008150 GO:0008152 GO:0009506 GO:0009553 GO:0009555 GO:0009559 GO:0009561 GO:0009987 GO:0010035 GO:0010038 GO:0010197 GO:0016020 GO:0016043 GO:0016740 GO:0016741 GO:0016742 GO:0030054 GO:0030154 GO:0032501 GO:0032502 GO:0042221 GO:0044237 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0048229 GO:0048284 GO:0048511 GO:0048856 GO:0048869 GO:0050896 GO:0055044 GO:0071840 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00260 ko00460 ko00630 ko00670 ko00680 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 ko01523 map00260 map00460 map00630 map00670 map00680 map01100 map01110 map01120 map01130 map01200 map01230 map01523

Pfam Domains

Protein Families

SHMT

Protein Analysis

542

Amino Acids

59.37

Weight (kDa)

8.56

Isoelectric Point (pI)

41.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SHMT	PF00464	82 - 481	2.3e-187	Serine hydroxymethyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013190)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G13890 AT4G13890 AT4G13930
fragaria_vesca	FvH4_4g13290 FvH4_4g13290
malus_domestica	MD05G1230200.v1.1
prunus_persica	Prupe.1G165100_v2.0.a1
pyrus_communis	pycom04g01360 pycom420g00990
rosa_chinensis	RchiOBHm_Chr4g0413581
rosa_laevigata	RLG00000008211
rosa_multiflora	Rmu_sc0008298.1_g000001
rosa_roxburghii	Rroxscaffold_5G00357460
rosa_rugosa	Rorug04G0121000
rosa_samantha	Rh4AG180800 Rh4BG180000 Rh4CG191900
rosa_wichuraiana	Rw4G015100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1100
AccB7I	CCANNNNNTGG	1 cut(s)	795
AccBSI	CCGCTC	1 cut(s)	459
AccII	CGCG	4 cut(s)	227, 463, 465, 816
AccIII	TCCGGA	1 cut(s)	635
AclWI	GGATC	3 cut(s)	195, 259, 1263
AcoI	YGGCCR	1 cut(s)	1602
AcsI	RAATTY	1 cut(s)	1439
AcyI	GRCGYC	1 cut(s)	489
AfaI	GTAC	5 cut(s)	626, 686, 785, 911, 1616
AflII	CTTAAG	1 cut(s)	1118
AflIII	ACRYGT	1 cut(s)	225
AgsI	TTSAA	6 cut(s)	1037, 1073, 1144, 1471, 1510, 1541
AjnI	CCWGG	3 cut(s)	471, 788, 1363
AluBI	AGCT	6 cut(s)	316, 893, 945, 1109, 1216, 1297
AluI	AGCT	6 cut(s)	316, 893, 945, 1109, 1216, 1297
Alw21I	GWGCWC	3 cut(s)	318, 841, 1387
AlwI	GGATC	3 cut(s)	195, 259, 1263
AlwNI	CAGNNNCTG	1 cut(s)	795
Ama87I	CYCGRG	6 cut(s)	245, 260, 563, 1013, 1136, 1184
Aor13HI	TCCGGA	1 cut(s)	635
ApeKI	GCWGC	3 cut(s)	366, 881, 893
ApoI	RAATTY	1 cut(s)	1439
ArsI	GACNNNNNNTTYG	2 cut(s)	489, 521
Asp700I	GAANNNNTTC	1 cut(s)	1443
AspA2I	CCTAGG	1 cut(s)	956
AspLEI	GCGC	5 cut(s)	294, 371, 465, 467, 818
AspS9I	GGNCC	8 cut(s)	256, 358, 592, 953, 986, 1006, 1079, 1452
AsuC2I	CCSGG	4 cut(s)	402, 1137, 1138, 1590
AsuHPI	GGTGA	7 cut(s)	328, 367, 602, 1082, 1355, 1456, 1534
AvaI	CYCGRG	6 cut(s)	245, 260, 563, 1013, 1136, 1184
AvaII	GGWCC	5 cut(s)	256, 592, 953, 986, 1079
AvrII	CCTAGG	1 cut(s)	956
BaeGI	GKGCMC	1 cut(s)	1105
BanI	GGYRCC	1 cut(s)	1100
BanII	GRGCYC	2 cut(s)	318, 570
BbsI	GAAGAC	1 cut(s)	1044
Bbv12I	GWGCWC	3 cut(s)	318, 841, 1387
BbvI	GCAGC	3 cut(s)	378, 868, 880
BccI	CCATC	2 cut(s)	44, 607
BceAI	ACGGC	5 cut(s)	332, 542, 667, 803, 1439
BcgI	CGANNNNNNTGC	2 cut(s)	302, 336
BciT130I	CCWGG	3 cut(s)	473, 790, 1365
BcnI	CCSGG	4 cut(s)	402, 1137, 1138, 1590
BfaI	CTAG	2 cut(s)	957, 1106
BfmI	CTRYAG	1 cut(s)	976
BfoI	RGCGCY	2 cut(s)	295, 372
BfrI	CTTAAG	1 cut(s)	1118
BglI	GCCNNNNNGGC	1 cut(s)	473
BglII	AGATCT	1 cut(s)	648
BlnI	CCTAGG	1 cut(s)	956
BmcAI	AGTACT	1 cut(s)	911
Bme1390I	CCNGG	7 cut(s)	402, 473, 790, 1137, 1138, 1365, 1590
Bme18I	GGWCC	5 cut(s)	256, 592, 953, 986, 1079
BmeT110I	CYCGRG	6 cut(s)	245, 260, 563, 1013, 1136, 1184
BmgT120I	GGNCC	8 cut(s)	256, 358, 592, 953, 986, 1006, 1079, 1452
BmiI	GGNNCC	7 cut(s)	216, 258, 812, 954, 987, 1102, 1362
BmrFI	CCNGG	7 cut(s)	402, 473, 790, 1137, 1138, 1365, 1590
BmrI	ACTGGG	2 cut(s)	714, 805
BmsI	GCATC	1 cut(s)	588
BmuI	ACTGGG	2 cut(s)	714, 805
BpiI	GAAGAC	1 cut(s)	1044
BplI	GAGNNNNNCTC	2 cut(s)	1553, 1585
BpmI	CTGGAG	2 cut(s)	455, 1386
Bpu10I	CCTNAGC	1 cut(s)	885
BpuEI	CTTGAG	4 cut(s)	967, 1384, 1484, 1532
BpuMI	CCSGG	4 cut(s)	402, 1137, 1138, 1590
Bsa29I	ATCGAT	1 cut(s)	714
BsaHI	GRCGYC	1 cut(s)	489
BsaWI	WCCGGW	2 cut(s)	524, 635
BsaXI	ACNNNNNCTCC	2 cut(s)	323, 353
Bse118I	RCCGGY	1 cut(s)	1277
Bse1I	ACTGG	3 cut(s)	218, 709, 800
Bse3DI	GCAATG	1 cut(s)	318
BseAI	TCCGGA	1 cut(s)	635
BseBI	CCWGG	3 cut(s)	473, 790, 1365
BseCI	ATCGAT	1 cut(s)	714
BseGI	GGATG	2 cut(s)	36, 599
BseMI	GCAATG	1 cut(s)	318
BseMII	CTCAG	2 cut(s)	899, 1273
BseNI	ACTGG	3 cut(s)	218, 709, 800
BsePI	GCGCGC	1 cut(s)	463
BseRI	GAGGAG	5 cut(s)	169, 172, 229, 746, 1383
BseSI	GKGCMC	1 cut(s)	1105
BseXI	GCAGC	3 cut(s)	378, 868, 880
BsgI	GTGCAG	1 cut(s)	1041
Bsh1236I	CGCG	4 cut(s)	227, 463, 465, 816
BshNI	GGYRCC	1 cut(s)	1100
BshVI	ATCGAT	1 cut(s)	714
BsiHKAI	GWGCWC	3 cut(s)	318, 841, 1387
BsiHKCI	CYCGRG	6 cut(s)	245, 260, 563, 1013, 1136, 1184
BsiSI	CCGG	8 cut(s)	402, 525, 603, 636, 1137, 1278, 1388, 1590
BslFI	GGGAC	3 cut(s)	191, 806, 999
BsmFI	GGGAC	3 cut(s)	191, 806, 999
BsmI	GAATGC	1 cut(s)	1336
BsoBI	CYCGRG	6 cut(s)	245, 260, 563, 1013, 1136, 1184
Bsp1286I	GDGCHC	5 cut(s)	318, 570, 841, 1105, 1387
Bsp13I	TCCGGA	1 cut(s)	635
Bsp143I	GATC	6 cut(s)	200, 264, 441, 648, 969, 1255
Bsp19I	CCATGG	1 cut(s)	210
BspCNI	CTCAG	2 cut(s)	898, 1272
BspDI	ATCGAT	1 cut(s)	714
BspEI	TCCGGA	1 cut(s)	635
BspFNI	CGCG	4 cut(s)	227, 463, 465, 816
BspLI	GGNNCC	7 cut(s)	216, 258, 812, 954, 987, 1102, 1362
BspPI	GGATC	3 cut(s)	195, 259, 1263
BspT107I	GGYRCC	1 cut(s)	1100
BspTI	CTTAAG	1 cut(s)	1118
BsrBI	CCGCTC	1 cut(s)	459
BsrDI	GCAATG	1 cut(s)	318
BsrFI	RCCGGY	1 cut(s)	1277
BsrI	ACTGG	3 cut(s)	218, 709, 800
BssAI	RCCGGY	1 cut(s)	1277
BssHII	GCGCGC	1 cut(s)	463
BssMI	GATC	6 cut(s)	200, 264, 441, 648, 969, 1255
BssNI	GRCGYC	1 cut(s)	489
BssT1I	CCWWGG	5 cut(s)	210, 741, 956, 1356, 1599
Bst2UI	CCWGG	3 cut(s)	473, 790, 1365
Bst4CI	ACNGT	2 cut(s)	914, 1321
BstACI	GRCGYC	1 cut(s)	489
BstAFI	CTTAAG	1 cut(s)	1118
BstC8I	GCNNGC	6 cut(s)	74, 398, 461, 465, 1010, 1125
BstDEI	CTNAG	2 cut(s)	885, 1259
BstDSI	CCRYGG	2 cut(s)	210, 619
BstEII	GGTNACC	1 cut(s)	608
BstF5I	GGATG	2 cut(s)	36, 599
BstFNI	CGCG	4 cut(s)	227, 463, 465, 816
BstH2I	RGCGCY	2 cut(s)	295, 372
BstHHI	GCGC	5 cut(s)	294, 371, 465, 467, 818
BstKTI	GATC	6 cut(s)	203, 267, 444, 651, 972, 1258
BstMBI	GATC	6 cut(s)	200, 264, 441, 648, 969, 1255
BstMWI	GCNNNNNNNGC	7 cut(s)	300, 402, 462, 473, 542, 554, 890
BstNI	CCWGG	3 cut(s)	473, 790, 1365
BstNSI	RCATGY	2 cut(s)	400, 1588
BstPI	GGTNACC	1 cut(s)	608
BstSCI	CCNGG	7 cut(s)	400, 471, 788, 1135, 1136, 1363, 1588
BstSFI	CTRYAG	1 cut(s)	976
BstSLI	GKGCMC	1 cut(s)	1105
BstUI	CGCG	4 cut(s)	227, 463, 465, 816
BstV1I	GCAGC	3 cut(s)	378, 868, 880
BstV2I	GAAGAC	1 cut(s)	1044
BstX2I	RGATCY	3 cut(s)	264, 648, 1255
BstYI	RGATCY	3 cut(s)	264, 648, 1255
Bsu15I	ATCGAT	1 cut(s)	714
BsuTUI	ATCGAT	1 cut(s)	714
BtgI	CCRYGG	2 cut(s)	210, 619
BtsCI	GGATG	2 cut(s)	36, 599
BtsI	GCAGTG	2 cut(s)	784, 1357
BtsIMutI	CAGTG	2 cut(s)	784, 1357
Cac8I	GCNNGC	6 cut(s)	74, 398, 461, 465, 1010, 1125
CaiI	CAGNNNCTG	1 cut(s)	795
CfoI	GCGC	5 cut(s)	294, 371, 465, 467, 818
Cfr10I	RCCGGY	1 cut(s)	1277
Cfr13I	GGNCC	8 cut(s)	256, 358, 592, 953, 986, 1006, 1079, 1452
Cfr9I	CCCGGG	1 cut(s)	1136
ClaI	ATCGAT	1 cut(s)	714
CseI	GACGC	1 cut(s)	497
Csp6I	GTAC	5 cut(s)	625, 685, 784, 910, 1615
CviAII	CATG	9 cut(s)	211, 397, 572, 583, 856, 1129, 1487, 1585, 1609
CviQI	GTAC	5 cut(s)	625, 685, 784, 910, 1615
DdeI	CTNAG	2 cut(s)	885, 1259
DpnI	GATC	6 cut(s)	202, 266, 443, 650, 971, 1257
DpnII	GATC	6 cut(s)	200, 264, 441, 648, 969, 1255
EaeI	YGGCCR	1 cut(s)	1602
EciI	GGCGGA	1 cut(s)	1561
Ecl136II	GAGCTC	1 cut(s)	316
Eco130I	CCWWGG	5 cut(s)	210, 741, 956, 1356, 1599
Eco147I	AGGCCT	3 cut(s)	476, 740, 1264
Eco24I	GRGCYC	2 cut(s)	318, 570
Eco47I	GGWCC	5 cut(s)	256, 592, 953, 986, 1079
Eco53kI	GAGCTC	1 cut(s)	316
Eco88I	CYCGRG	6 cut(s)	245, 260, 563, 1013, 1136, 1184
Eco91I	GGTNACC	1 cut(s)	608
EcoICRI	GAGCTC	1 cut(s)	316
EcoO109I	RGGNCCY	2 cut(s)	358, 953
EcoO65I	GGTNACC	1 cut(s)	608
EcoRI	GAATTC	1 cut(s)	1439
EcoRII	CCWGG	3 cut(s)	471, 788, 1363
EcoT14I	CCWWGG	5 cut(s)	210, 741, 956, 1356, 1599
EcoT38I	GRGCYC	2 cut(s)	318, 570
ErhI	CCWWGG	5 cut(s)	210, 741, 956, 1356, 1599
FaeI	CATG	9 cut(s)	214, 400, 575, 586, 859, 1132, 1490, 1588, 1612
FalI	AAGNNNNNCTT	2 cut(s)	1034, 1066
FaqI	GGGAC	3 cut(s)	191, 806, 999
FatI	CATG	9 cut(s)	210, 396, 571, 582, 855, 1128, 1486, 1584, 1608
FauI	CCCGC	1 cut(s)	541
FokI	GGATG	2 cut(s)	23, 586
FriOI	GRGCYC	2 cut(s)	318, 570
FspBI	CTAG	2 cut(s)	957, 1106
GlaI	GCGC	5 cut(s)	293, 370, 464, 466, 817
GsuI	CTGGAG	2 cut(s)	455, 1386
HaeII	RGCGCY	2 cut(s)	295, 372
HapII	CCGG	8 cut(s)	402, 525, 603, 636, 1137, 1278, 1388, 1590
HgaI	GACGC	1 cut(s)	497
HhaI	GCGC	5 cut(s)	294, 371, 465, 467, 818
Hin1I	GRCGYC	1 cut(s)	489
Hin1II	CATG	9 cut(s)	214, 400, 575, 586, 859, 1132, 1490, 1588, 1612
Hin6I	GCGC	5 cut(s)	292, 369, 463, 465, 816
HinP1I	GCGC	5 cut(s)	292, 369, 463, 465, 816
HincII	GTYRAC	1 cut(s)	1048
HindII	GTYRAC	1 cut(s)	1048
HindIII	AAGCTT	2 cut(s)	1214, 1295
HinfI	GANTC	3 cut(s)	309, 676, 1377
HpaII	CCGG	8 cut(s)	402, 525, 603, 636, 1137, 1278, 1388, 1590
HphI	GGTGA	7 cut(s)	328, 367, 602, 1082, 1355, 1456, 1534
Hpy166II	GTNNAC	6 cut(s)	223, 256, 1027, 1048, 1324, 1525
Hpy188I	TCNGA	3 cut(s)	200, 328, 391
Hpy8I	GTNNAC	6 cut(s)	223, 256, 1027, 1048, 1324, 1525
Hpy99I	CGWCG	2 cut(s)	440, 491
HpyCH4III	ACNGT	2 cut(s)	914, 1321
HpyCH4V	TGCA	4 cut(s)	72, 896, 1022, 1311
HpyF10VI	GCNNNNNNNGC	7 cut(s)	300, 402, 462, 473, 542, 554, 890
HpyF3I	CTNAG	2 cut(s)	885, 1259
Hsp92I	GRCGYC	1 cut(s)	489
Hsp92II	CATG	9 cut(s)	214, 400, 575, 586, 859, 1132, 1490, 1588, 1612
HspAI	GCGC	5 cut(s)	292, 369, 463, 465, 816
Kpn2I	TCCGGA	1 cut(s)	635
Kzo9I	GATC	6 cut(s)	200, 264, 441, 648, 969, 1255
LmnI	GCTCC	3 cut(s)	1366, 1390, 1483
Lsp1109I	GCAGC	3 cut(s)	378, 868, 880
LweI	GCATC	1 cut(s)	588
MaeI	CTAG	2 cut(s)	957, 1106
MaeIII	GTNAC	7 cut(s)	608, 914, 922, 1219, 1301, 1343, 1456
MalI	GATC	6 cut(s)	202, 266, 443, 650, 971, 1257
MbiI	CCGCTC	1 cut(s)	459
MboI	GATC	6 cut(s)	200, 264, 441, 648, 969, 1255
MboII	GAAGA	8 cut(s)	165, 182, 655, 658, 964, 1049, 1441, 1553
MflI	RGATCY	3 cut(s)	264, 648, 1255
MhlI	GDGCHC	5 cut(s)	318, 570, 841, 1105, 1387
MluCI	AATT	4 cut(s)	694, 758, 765, 1439
MluI	ACGCGT	1 cut(s)	225
MlyI	GAGTC	1 cut(s)	685
MmeI	TCCRAC	1 cut(s)	708
MroI	TCCGGA	1 cut(s)	635
MroXI	GAANNNNTTC	1 cut(s)	1443
MseI	TTAA	2 cut(s)	1119, 1624
MslI	CAYNNNNRTG	1 cut(s)	1319
MspCI	CTTAAG	1 cut(s)	1118
MspI	CCGG	8 cut(s)	402, 525, 603, 636, 1137, 1278, 1388, 1590
MspR9I	CCNGG	7 cut(s)	402, 473, 790, 1137, 1138, 1365, 1590
Mva1269I	GAATGC	1 cut(s)	1336
MvaI	CCWGG	3 cut(s)	473, 790, 1365
MvnI	CGCG	4 cut(s)	227, 463, 465, 816
MwoI	GCNNNNNNNGC	7 cut(s)	300, 402, 462, 473, 542, 554, 890
NciI	CCSGG	4 cut(s)	402, 1137, 1138, 1590
NcoI	CCATGG	1 cut(s)	210
NdeII	GATC	6 cut(s)	200, 264, 441, 648, 969, 1255
NlaIII	CATG	9 cut(s)	214, 400, 575, 586, 859, 1132, 1490, 1588, 1612
NlaIV	GGNNCC	7 cut(s)	216, 258, 812, 954, 987, 1102, 1362
NmeAIII	GCCGAG	3 cut(s)	329, 342, 632
NmuCI	GTSAC	6 cut(s)	608, 914, 922, 1219, 1301, 1343
NspI	RCATGY	2 cut(s)	400, 1588
PaeI	GCATGC	1 cut(s)	400
PaeR7I	CTCGAG	2 cut(s)	245, 563
PasI	CCCWGGG	1 cut(s)	789
PauI	GCGCGC	1 cut(s)	463
PceI	AGGCCT	3 cut(s)	476, 740, 1264
PcsI	WCGNNNNNNNCGW	5 cut(s)	276, 423, 432, 441, 659
PctI	GAATGC	1 cut(s)	1336
PdmI	GAANNNNTTC	1 cut(s)	1443
PfeI	GAWTC	2 cut(s)	309, 1377
PflFI	GACNNNGTC	2 cut(s)	920, 1043
PflMI	CCANNNNNTGG	1 cut(s)	795
PfoI	TCCNGGA	1 cut(s)	1363
PleI	GAGTC	1 cut(s)	684
PpsI	GAGTC	1 cut(s)	684
PpuMI	RGGWCCY	1 cut(s)	953
Psp124BI	GAGCTC	1 cut(s)	318
Psp5II	RGGWCCY	1 cut(s)	953
Psp6I	CCWGG	3 cut(s)	471, 788, 1363
PspEI	GGTNACC	1 cut(s)	608
PspGI	CCWGG	3 cut(s)	471, 788, 1363
PspN4I	GGNNCC	7 cut(s)	216, 258, 812, 954, 987, 1102, 1362
PspPI	GGNCC	8 cut(s)	256, 358, 592, 953, 986, 1006, 1079, 1452
PspPPI	RGGWCCY	1 cut(s)	953
PspXI	VCTCGAGB	1 cut(s)	563
PstNI	CAGNNNCTG	1 cut(s)	795
PsuI	RGATCY	3 cut(s)	264, 648, 1255
PsyI	GACNNNGTC	2 cut(s)	920, 1043
PteI	GCGCGC	1 cut(s)	463
RsaI	GTAC	5 cut(s)	626, 686, 785, 911, 1616
RsaNI	GTAC	5 cut(s)	625, 685, 784, 910, 1615
RseI	CAYNNNNRTG	1 cut(s)	1319
SacI	GAGCTC	1 cut(s)	318
SaqAI	TTAA	2 cut(s)	1119, 1624
Sau3AI	GATC	6 cut(s)	200, 264, 441, 648, 969, 1255
Sau96I	GGNCC	8 cut(s)	256, 358, 592, 953, 986, 1006, 1079, 1452
ScaI	AGTACT	1 cut(s)	911
SchI	GAGTC	1 cut(s)	685
ScrFI	CCNGG	7 cut(s)	402, 473, 790, 1137, 1138, 1365, 1590
SduI	GDGCHC	5 cut(s)	318, 570, 841, 1105, 1387
SfaNI	GCATC	1 cut(s)	588
SfcI	CTRYAG	1 cut(s)	976
Sfr274I	CTCGAG	2 cut(s)	245, 563
SinI	GGWCC	5 cut(s)	256, 592, 953, 986, 1079
SlaI	CTCGAG	2 cut(s)	245, 563
SmaI	CCCGGG	1 cut(s)	1138
SmiMI	CAYNNNNRTG	1 cut(s)	1319
SmlI	CTYRAG	7 cut(s)	245, 563, 946, 1118, 1399, 1499, 1547
SmoI	CTYRAG	7 cut(s)	245, 563, 946, 1118, 1399, 1499, 1547
SphI	GCATGC	1 cut(s)	400
Sse9I	AATT	4 cut(s)	694, 758, 765, 1439
SseBI	AGGCCT	3 cut(s)	476, 740, 1264
SspMI	CTAG	2 cut(s)	957, 1106
SstI	GAGCTC	1 cut(s)	318
StuI	AGGCCT	3 cut(s)	476, 740, 1264
StyD4I	CCNGG	7 cut(s)	400, 471, 788, 1135, 1136, 1363, 1588
StyI	CCWWGG	5 cut(s)	210, 741, 956, 1356, 1599
TaaI	ACNGT	2 cut(s)	914, 1321
TasI	AATT	4 cut(s)	694, 758, 765, 1439
TatI	WGTACW	2 cut(s)	909, 1614
TauI	GCSGC	7 cut(s)	297, 459, 494, 548, 774, 777, 873
TfiI	GAWTC	2 cut(s)	309, 1377
Tru1I	TTAA	2 cut(s)	1119, 1624
Tru9I	TTAA	2 cut(s)	1119, 1624
TscAI	CASTG	2 cut(s)	784, 1357
TseFI	GTSAC	6 cut(s)	608, 914, 922, 1219, 1301, 1343
TseI	GCWGC	3 cut(s)	366, 881, 893
Tsp45I	GTSAC	6 cut(s)	608, 914, 922, 1219, 1301, 1343
TspDTI	ATGAA	4 cut(s)	17, 421, 700, 1625
TspGWI	ACGGA	3 cut(s)	155, 193, 432
TspMI	CCCGGG	1 cut(s)	1136
TspRI	CASTG	2 cut(s)	784, 1357
Tth111I	GACNNNGTC	2 cut(s)	920, 1043
Van91I	CCANNNNNTGG	1 cut(s)	795
Vha464I	CTTAAG	1 cut(s)	1118
VpaK11BI	GGWCC	5 cut(s)	256, 592, 953, 986, 1079
XapI	RAATTY	1 cut(s)	1439
XceI	RCATGY	2 cut(s)	400, 1588
XcmI	CCANNNNNNNNNTGG	2 cut(s)	225, 1484
XhoI	CTCGAG	2 cut(s)	245, 563
XmaI	CCCGGG	1 cut(s)	1136
XmaJI	CCTAGG	1 cut(s)	956
XmnI	GAANNNNTTC	1 cut(s)	1443
XspI	CTAG	2 cut(s)	957, 1106
ZrmI	AGTACT	1 cut(s)	911

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.