Rmu_sc0008298.1_g000001

Interconversion of serine and glycine

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008298.1
Physical Location & Seq
Reverse (-)
1 .. 2117
2117 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008298.1_g000001.1.cds

Sequence Viewer

Length: 1171 bp
atggaggcagtaaacgcatggggtaacaccaacctggaggccgtggacccagagatccacgacctgatcgagaaggagaagcgtcgccaatgccgcggcatcgagctcatcgcctccgagaacttcacctccttcgccgtcatcgaggccctcggcagcgccctcaccaacaaatactccgagggcatgcccggcaaccgctactacggcggcaacgagtacatcgaccagatcgagaacctctgccgctcacgcgccctccaggccttccacctcgacgcgtctcagtggggcgtcaatgtccagccctactccggctccccggccaacttcgccgcctacaccgccgtgctccagccccacgaccgcatcatgggcctggacctcccctccggcgggcacttgacccacggttactacacctccggcgggaagaagatctccgccacctcgatctacttcgagagtctgccgtacaaggtgaattcctccaccgggtacattgattacgataagctggaggagaaggccttggatttcaggccgagattgatcatttgcggcgggagtgcgtatcccagagactgggactacgctaggttcagggccgtggcggataagtgcggtgcgcttttgctctgtgacatggctcacatcagtggccttgtttgtgctcaggaagctgcaaatccatttgagttctgtgacattgtcacaaccacaacccacaagagcttgaggggacctagggctggtatgatcttttacaggaaggggcctaagccacccaagaagggccagccagagggtgcagaatatgactttgaagacaagatcaactttgctgttttcccctcgcttcagggtggtcctcataatcaccagattggtgctctcgctgttgctcttaagcaggccatgacacctgggttcaaagcctatgctcaacaagtcaaggccaatgctgttgccctcggaaagtatctgatgagcaaggattacaagcttgtaacaggaggaaccgagaaccaccttgttctgtgggatctcaggcctctgggtttgaccggcaacaaggttgagaagctttgtgacctagcaaacattactgtgaacaagaatgctgtttttggtgacagcagtgccttggcccctggaggagtaagaattg

Protein Analysis

390

Amino Acids

42.69

Weight (kDa)

7.12

Isoelectric Point (pI)

40.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013190)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G13890 AT4G13890 AT4G13930
fragaria_vesca FvH4_4g13290 FvH4_4g13290
malus_domestica MD05G1230200.v1.1
prunus_persica Prupe.1G165100_v2.0.a1
pyrus_communis pycom04g01360 pycom420g00990
rosa_chinensis RchiOBHm_Chr4g0413581
rosa_laevigata RLG00000008211
rosa_multiflora Rmu_sc0008298.1_g000001
rosa_roxburghii Rroxscaffold_5G00357460
rosa_rugosa Rorug04G0121000
rosa_samantha Rh4AG180800 Rh4BG180000 Rh4CG191900
rosa_wichuraiana Rw4G015100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 585
AccBSI CCGCTC 1 cut(s) 249
AccII CGCG 3 cut(s) 96, 255, 281
AclWI GGATC 2 cut(s) 49, 1053
AcoI YGGCCR 1 cut(s) 324
AcsI RAATTY 1 cut(s) 484
AcuI CTGAAG 1 cut(s) 845
AcyI GRCGYC 1 cut(s) 294
AfaI GTAC 3 cut(s) 221, 476, 500
AflII CTTAAG 1 cut(s) 908
AflIII ACRYGT 1 cut(s) 279
AgsI TTSAA 2 cut(s) 827, 934
AjnI CCWGG 5 cut(s) 33, 261, 378, 925, 1153
AleI CACNNNNGTG 2 cut(s) 347, 657
AloI GAACNNNNNNTCC 2 cut(s) 113, 145
AluBI AGCT 6 cut(s) 106, 517, 683, 735, 1006, 1087
AluI AGCT 6 cut(s) 106, 517, 683, 735, 1006, 1087
Alw21I GWGCWC 4 cut(s) 108, 354, 676, 895
Alw26I GTCTC 2 cut(s) 288, 576
AlwI GGATC 2 cut(s) 49, 1053
AlwNI CAGNNNCTG 1 cut(s) 585
ApeKI GCWGC 2 cut(s) 156, 683
ApoI RAATTY 1 cut(s) 484
AspA2I CCTAGG 1 cut(s) 746
AspLEI GCGC 3 cut(s) 161, 257, 631
AsuC2I CCSGG 3 cut(s) 192, 323, 496
AsuHPI GGTGA 5 cut(s) 118, 157, 493, 872, 1145
AvaII GGWCC 4 cut(s) 46, 382, 743, 869
AvrII CCTAGG 1 cut(s) 746
BaeGI GKGCMC 1 cut(s) 402
BanII GRGCYC 1 cut(s) 108
BbsI GAAGAC 1 cut(s) 834
Bbv12I GWGCWC 4 cut(s) 108, 354, 676, 895
BbvI GCAGC 2 cut(s) 168, 670
BceAI ACGGC 6 cut(s) 26, 122, 223, 332, 457, 593
BciT130I CCWGG 5 cut(s) 35, 263, 380, 927, 1155
BciVI GTATCC 1 cut(s) 585
BclI TGATCA 1 cut(s) 552
BcnI CCSGG 3 cut(s) 192, 323, 496
BcoDI GTCTC 2 cut(s) 288, 576
BfaI CTAG 3 cut(s) 597, 747, 1097
BfoI RGCGCY 1 cut(s) 162
BfrI CTTAAG 1 cut(s) 908
BfuI GTATCC 1 cut(s) 585
BglI GCCNNNNNGGC 1 cut(s) 263
BglII AGATCT 1 cut(s) 438
BisI GCNGC 8 cut(s) 94, 97, 157, 211, 247, 336, 562, 684
BlnI CCTAGG 1 cut(s) 746
BlsI GCNGC 8 cut(s) 95, 98, 158, 212, 248, 337, 563, 685
Bme1390I CCNGG 8 cut(s) 35, 192, 263, 323, 380, 496, 927, 1155
Bme18I GGWCC 4 cut(s) 46, 382, 743, 869
BmiI GGNNCC 6 cut(s) 48, 319, 744, 777, 1021, 1152
BmrFI CCNGG 8 cut(s) 35, 192, 263, 323, 380, 496, 927, 1155
BmrI ACTGGG 1 cut(s) 595
BmsI GCATC 2 cut(s) 108, 378
BmuI ACTGGG 1 cut(s) 595
BpiI GAAGAC 1 cut(s) 834
BpmI CTGGAG 4 cut(s) 56, 245, 338, 539
Bpu10I CCTNAGC 2 cut(s) 675, 780
BpuEI CTTGAG 1 cut(s) 757
BpuMI CCSGG 3 cut(s) 192, 323, 496
BsaHI GRCGYC 1 cut(s) 294
Bse118I RCCGGY 1 cut(s) 1067
Bse1I ACTGG 1 cut(s) 590
BseBI CCWGG 5 cut(s) 35, 263, 380, 927, 1155
BseMII CTCAG 3 cut(s) 299, 689, 1063
BseNI ACTGG 1 cut(s) 590
BseRI GAGGAG 1 cut(s) 536
BseSI GKGCMC 1 cut(s) 402
BseXI GCAGC 2 cut(s) 168, 670
BsgI GTGCAG 1 cut(s) 831
Bsh1236I CGCG 3 cut(s) 96, 255, 281
Bsh1285I CGRYCG 1 cut(s) 367
BsiEI CGRYCG 1 cut(s) 367
BsiHKAI GWGCWC 4 cut(s) 108, 354, 676, 895
BsiSI CCGG 7 cut(s) 192, 315, 323, 393, 426, 495, 1068
BslFI GGGAC 2 cut(s) 602, 756
BsmAI GTCTC 2 cut(s) 288, 576
BsmBI CGTCTC 1 cut(s) 288
BsmFI GGGAC 2 cut(s) 602, 756
BsmI GAATGC 1 cut(s) 1126
Bsp1286I GDGCHC 5 cut(s) 108, 354, 402, 676, 895
Bsp143I GATC 9 cut(s) 54, 66, 231, 438, 453, 552, 759, 834, 1045
BspCNI CTCAG 3 cut(s) 298, 688, 1062
BspFNI CGCG 3 cut(s) 96, 255, 281
BspLI GGNNCC 6 cut(s) 48, 319, 744, 777, 1021, 1152
BspPI GGATC 2 cut(s) 49, 1053
BspTI CTTAAG 1 cut(s) 908
BsrBI CCGCTC 1 cut(s) 249
BsrFI RCCGGY 1 cut(s) 1067
BsrI ACTGG 1 cut(s) 590
BssAI RCCGGY 1 cut(s) 1067
BssMI GATC 9 cut(s) 54, 66, 231, 438, 453, 552, 759, 834, 1045
BssNI GRCGYC 1 cut(s) 294
BssT1I CCWWGG 3 cut(s) 531, 746, 1146
Bst2UI CCWGG 5 cut(s) 35, 263, 380, 927, 1155
Bst4CI ACNGT 2 cut(s) 413, 1111
BstACI GRCGYC 1 cut(s) 294
BstAFI CTTAAG 1 cut(s) 908
BstC8I GCNNGC 4 cut(s) 188, 398, 800, 915
BstDEI CTNAG 4 cut(s) 285, 675, 780, 1049
BstDSI CCRYGG 4 cut(s) 42, 94, 409, 609
BstFNI CGCG 3 cut(s) 96, 255, 281
BstH2I RGCGCY 1 cut(s) 162
BstHHI GCGC 3 cut(s) 161, 257, 631
BstKTI GATC 9 cut(s) 57, 69, 234, 441, 456, 555, 762, 837, 1048
BstMAI GTCTC 2 cut(s) 288, 576
BstMBI GATC 9 cut(s) 54, 66, 231, 438, 453, 552, 759, 834, 1045
BstMCI CGRYCG 1 cut(s) 367
BstNI CCWGG 5 cut(s) 35, 263, 380, 927, 1155
BstNSI RCATGY 1 cut(s) 190
BstSCI CCNGG 8 cut(s) 33, 190, 261, 321, 378, 494, 925, 1153
BstSLI GKGCMC 1 cut(s) 402
BstUI CGCG 3 cut(s) 96, 255, 281
BstV1I GCAGC 2 cut(s) 168, 670
BstV2I GAAGAC 1 cut(s) 834
BstX2I RGATCY 3 cut(s) 54, 438, 1045
BstYI RGATCY 3 cut(s) 54, 438, 1045
BsuI GTATCC 1 cut(s) 585
BtgI CCRYGG 4 cut(s) 42, 94, 409, 609
BtgZI GCGATG 1 cut(s) 94
BtsI GCAGTG 1 cut(s) 1147
BtsIMutI CAGTG 3 cut(s) 293, 664, 1147
Cac8I GCNNGC 4 cut(s) 188, 398, 800, 915
CaiI CAGNNNCTG 1 cut(s) 585
CfoI GCGC 3 cut(s) 161, 257, 631
Cfr10I RCCGGY 1 cut(s) 1067
Cfr42I CCGCGG 1 cut(s) 97
CseI GACGC 4 cut(s) 71, 270, 283, 287
Csp6I GTAC 3 cut(s) 220, 475, 499
CviAII CATG 5 cut(s) 18, 187, 373, 646, 919
CviQI GTAC 3 cut(s) 220, 475, 499
DdeI CTNAG 4 cut(s) 285, 675, 780, 1049
DpnI GATC 9 cut(s) 56, 68, 233, 440, 455, 554, 761, 836, 1047
DpnII GATC 9 cut(s) 54, 66, 231, 438, 453, 552, 759, 834, 1045
EaeI YGGCCR 1 cut(s) 324
EciI GGCGGA 2 cut(s) 433, 629
Ecl136II GAGCTC 1 cut(s) 106
Eco130I CCWWGG 3 cut(s) 531, 746, 1146
Eco147I AGGCCT 3 cut(s) 266, 530, 1054
Eco24I GRGCYC 1 cut(s) 108
Eco47I GGWCC 4 cut(s) 46, 382, 743, 869
Eco53kI GAGCTC 1 cut(s) 106
Eco57I CTGAAG 1 cut(s) 845
EcoICRI GAGCTC 1 cut(s) 106
EcoO109I RGGNCCY 3 cut(s) 148, 743, 776
EcoRI GAATTC 1 cut(s) 484
EcoRII CCWGG 5 cut(s) 33, 261, 378, 925, 1153
EcoT14I CCWWGG 3 cut(s) 531, 746, 1146
EcoT38I GRGCYC 1 cut(s) 108
ErhI CCWWGG 3 cut(s) 531, 746, 1146
Esp3I CGTCTC 1 cut(s) 288
FaeI CATG 5 cut(s) 21, 190, 376, 649, 922
FaiI YATR 9 cut(s) 19, 188, 374, 647, 758, 819, 876, 920, 942
FalI AAGNNNNNCTT 2 cut(s) 824, 856
FaqI GGGAC 2 cut(s) 602, 756
FatI CATG 5 cut(s) 17, 186, 372, 645, 918
FauI CCCGC 3 cut(s) 389, 422, 557
FbaI TGATCA 1 cut(s) 552
Fnu4HI GCNGC 8 cut(s) 94, 97, 157, 211, 247, 336, 562, 684
FriOI GRGCYC 1 cut(s) 108
Fsp4HI GCNGC 8 cut(s) 94, 97, 157, 211, 247, 336, 562, 684
FspBI CTAG 3 cut(s) 597, 747, 1097
GlaI GCGC 3 cut(s) 160, 256, 630
GluI GCNGC 8 cut(s) 94, 97, 157, 211, 247, 336, 562, 684
GsuI CTGGAG 4 cut(s) 56, 245, 338, 539
HaeII RGCGCY 1 cut(s) 162
HapII CCGG 7 cut(s) 192, 315, 323, 393, 426, 495, 1068
HgaI GACGC 4 cut(s) 71, 270, 283, 287
HhaI GCGC 3 cut(s) 161, 257, 631
Hin1I GRCGYC 1 cut(s) 294
Hin1II CATG 5 cut(s) 21, 190, 376, 649, 922
Hin6I GCGC 3 cut(s) 159, 255, 629
HinP1I GCGC 3 cut(s) 159, 255, 629
HindIII AAGCTT 2 cut(s) 1004, 1085
HinfI GANTC 1 cut(s) 466
HpaII CCGG 7 cut(s) 192, 315, 323, 393, 426, 495, 1068
HphI GGTGA 5 cut(s) 118, 157, 493, 872, 1145
Hpy166II GTNNAC 3 cut(s) 13, 46, 1114
Hpy188I TCNGA 4 cut(s) 118, 181, 977, 987
Hpy188III TCNNGA 4 cut(s) 70, 235, 463, 677
Hpy8I GTNNAC 3 cut(s) 13, 46, 1114
Hpy99I CGWCG 2 cut(s) 87, 281
HpyAV CCTTC 6 cut(s) 67, 142, 277, 520, 766, 787
HpyCH4III ACNGT 2 cut(s) 413, 1111
HpyCH4V TGCA 2 cut(s) 686, 812
HpyF3I CTNAG 4 cut(s) 285, 675, 780, 1049
Hsp92I GRCGYC 1 cut(s) 294
Hsp92II CATG 5 cut(s) 21, 190, 376, 649, 922
HspAI GCGC 3 cut(s) 159, 255, 629
Ksp22I TGATCA 1 cut(s) 552
KspI CCGCGG 1 cut(s) 97
Kzo9I GATC 9 cut(s) 54, 66, 231, 438, 453, 552, 759, 834, 1045
LmnI GCTCC 2 cut(s) 323, 357
Lsp1109I GCAGC 2 cut(s) 168, 670
LweI GCATC 2 cut(s) 108, 378
MaeI CTAG 3 cut(s) 597, 747, 1097
MaeIII GTNAC 8 cut(s) 23, 413, 641, 704, 712, 1009, 1091, 1133
MalI GATC 9 cut(s) 56, 68, 233, 440, 455, 554, 761, 836, 1047
MbiI CCGCTC 1 cut(s) 249
MboI GATC 9 cut(s) 54, 66, 231, 438, 453, 552, 759, 834, 1045
MboII GAAGA 3 cut(s) 445, 448, 839
MflI RGATCY 3 cut(s) 54, 438, 1045
MhlI GDGCHC 5 cut(s) 108, 354, 402, 676, 895
MluCI AATT 2 cut(s) 484, 1167
MluI ACGCGT 1 cut(s) 279
MlyI GAGTC 1 cut(s) 475
MseI TTAA 1 cut(s) 909
MslI CAYNNNNRTG 3 cut(s) 347, 657, 1109
MspA1I CMGCKG 1 cut(s) 96
MspCI CTTAAG 1 cut(s) 908
MspI CCGG 7 cut(s) 192, 315, 323, 393, 426, 495, 1068
MspR9I CCNGG 8 cut(s) 35, 192, 263, 323, 380, 496, 927, 1155
Mva1269I GAATGC 1 cut(s) 1126
MvaI CCWGG 5 cut(s) 35, 263, 380, 927, 1155
MvnI CGCG 3 cut(s) 96, 255, 281
NciI CCSGG 3 cut(s) 192, 323, 496
NdeII GATC 9 cut(s) 54, 66, 231, 438, 453, 552, 759, 834, 1045
NlaIII CATG 5 cut(s) 21, 190, 376, 649, 922
NlaIV GGNNCC 6 cut(s) 48, 319, 744, 777, 1021, 1152
NmeAIII GCCGAG 2 cut(s) 132, 570
NmuCI GTSAC 5 cut(s) 641, 704, 712, 1091, 1133
NspI RCATGY 1 cut(s) 190
OliI CACNNNNGTG 2 cut(s) 347, 657
PaeI GCATGC 1 cut(s) 190
PceI AGGCCT 3 cut(s) 266, 530, 1054
PcsI WCGNNNNNNNCGW 5 cut(s) 66, 141, 213, 222, 231
PctI GAATGC 1 cut(s) 1126
PflFI GACNNNGTC 1 cut(s) 710
PflMI CCANNNNNTGG 1 cut(s) 585
PkrI GCNGC 8 cut(s) 95, 98, 158, 212, 248, 337, 563, 685
PleI GAGTC 1 cut(s) 474
PpsI GAGTC 1 cut(s) 474
PpuMI RGGWCCY 1 cut(s) 743
Psp124BI GAGCTC 1 cut(s) 108
Psp5II RGGWCCY 1 cut(s) 743
Psp6I CCWGG 5 cut(s) 33, 261, 378, 925, 1153
PspGI CCWGG 5 cut(s) 33, 261, 378, 925, 1153
PspN4I GGNNCC 6 cut(s) 48, 319, 744, 777, 1021, 1152
PspPPI RGGWCCY 1 cut(s) 743
PstNI CAGNNNCTG 1 cut(s) 585
PsuI RGATCY 3 cut(s) 54, 438, 1045
PsyI GACNNNGTC 1 cut(s) 710
RsaI GTAC 3 cut(s) 221, 476, 500
RsaNI GTAC 3 cut(s) 220, 475, 499
RseI CAYNNNNRTG 3 cut(s) 347, 657, 1109
SacI GAGCTC 1 cut(s) 108
SacII CCGCGG 1 cut(s) 97
SaqAI TTAA 1 cut(s) 909
SatI GCNGC 8 cut(s) 94, 97, 157, 211, 247, 336, 562, 684
Sau3AI GATC 9 cut(s) 54, 66, 231, 438, 453, 552, 759, 834, 1045
SchI GAGTC 1 cut(s) 475
ScrFI CCNGG 8 cut(s) 35, 192, 263, 323, 380, 496, 927, 1155
SduI GDGCHC 5 cut(s) 108, 354, 402, 676, 895
SfaNI GCATC 2 cut(s) 108, 378
Sfr303I CCGCGG 1 cut(s) 97
SgrBI CCGCGG 1 cut(s) 97
SinI GGWCC 4 cut(s) 46, 382, 743, 869
SmiMI CAYNNNNRTG 3 cut(s) 347, 657, 1109
SmlI CTYRAG 2 cut(s) 736, 908
SmoI CTYRAG 2 cut(s) 736, 908
SphI GCATGC 1 cut(s) 190
Sse9I AATT 2 cut(s) 484, 1167
SseBI AGGCCT 3 cut(s) 266, 530, 1054
SspMI CTAG 3 cut(s) 597, 747, 1097
SstI GAGCTC 1 cut(s) 108
StuI AGGCCT 3 cut(s) 266, 530, 1054
StyD4I CCNGG 8 cut(s) 33, 190, 261, 321, 378, 494, 925, 1153
StyI CCWWGG 3 cut(s) 531, 746, 1146
TaaI ACNGT 2 cut(s) 413, 1111
TaqI TCGA 8 cut(s) 69, 102, 144, 225, 234, 276, 452, 462
TasI AATT 2 cut(s) 484, 1167
TatI WGTACW 1 cut(s) 219
TauI GCSGC 6 cut(s) 96, 99, 213, 249, 338, 564
Tru1I TTAA 1 cut(s) 909
Tru9I TTAA 1 cut(s) 909
TscAI CASTG 3 cut(s) 293, 664, 1147
TseFI GTSAC 5 cut(s) 641, 704, 712, 1091, 1133
TseI GCWGC 2 cut(s) 156, 683
Tsp45I GTSAC 5 cut(s) 641, 704, 712, 1091, 1133
TspRI CASTG 3 cut(s) 293, 664, 1147
Tth111I GACNNNGTC 1 cut(s) 710
Van91I CCANNNNNTGG 1 cut(s) 585
Vha464I CTTAAG 1 cut(s) 908
VpaK11BI GGWCC 4 cut(s) 46, 382, 743, 869
XapI RAATTY 1 cut(s) 484
XceI RCATGY 1 cut(s) 190
XmaJI CCTAGG 1 cut(s) 746
XspI CTAG 3 cut(s) 597, 747, 1097
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.