Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0013353

Physical Location & Seq

Genomic Coordinates Forward (+)

5892004 .. 5894362

Gene Structure 2359 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2226 bp

ATGTTGGCTGGGTGCTCTAGTTCCACATTGTTGTCACCAAGGCATAGATTGAGGAGTGAAGCAGCAGCCCAGTTACAAGCTTGCAGTTTCCAGCTACCATCAATGAGCACGCAGAGATTGGACTTACCATGCAGTTTTCCCCGCAAGGACACCTCAAGATCGATCGATTCGAAGGCGGGCGGTTGTTCTCTGAAGCAGAGCATCCGGCTGCCTCCTCTGGCTACCAGCGGTCCTGTGACGGCAACAGCGGCGTTCGTGGAGACAGGGAAGGAGAATCATGATCAGTTTTGGGGGGAGAAGAAGAGAGGGAAGAGGTTCGCGGAGCCGGTGGATGATGATGAGTCTTTCAGAAAAAGGGCAAAGAGGAAAAGGGGTTGTGGGGATAATGGCGGTGACGGCGAAGGCGGCGGTGGTTTGAGTTTAGGCCAATTGGGTGGTGGGAATTTTTGGTTTCAGCCTGGCTTCCATCTCCCTCCAACGACTCAGCCTCCGTTCTCTCTGACATGTTCAGGGGATGAAGAGAGGGTTTGTTATGTTCCGGCAGAGGAGATTTCGCAGCCTCTTCCGTTGTCGAACAATCCTTGGTTGGACTCAATTGTGACTGAGATTACTGACTTGGGGAAGAAGGATGGCGGCGGCGAGGCTAGCCGTGGATTGGTGGGGGAAGGATCAGCAGGGTCGAGTACTTCGTCGGAGAGCCAGAGCTTGGCTTTGAGGGTAAATGAGAGTGCCTCCGAACACGACACAGGTAACGGTACTCGGAATCCTTATGTCCCACAGGGAGGAGCAGGGGTTGTGGCAGAGGAGGAGGAGGATGATGAGAGTGAGGCAGAGCATCTAGGGTTTGAGCTTGTCAGCTTGCTTACAGCTTGTGTGGAGGCAATTGGGTTGAAGAACATTGCAGCAATCAACCATTTTATAGCTAAGTTAGGGGAGCTTGCTTCGCCGAAAGGAAGTGCTATAAGCCGGCTTTCTGCTTATTACACTGAGGCATTATCTCTGAGAGTCACAAGGCTTTGGCCTCATGTGTTTCAGATCGATGCTCCACGAAAGTTTGATCGAAGGGATGAGGACTCTGGGATTGAGCTGAGGCTTCTAAACCAGGTTAGCCCAATTCCAAAATTTGTTCATTTCACTTCAAATGAGATACTGCTGAGAGCTTTTGAAGGGAAGGACAGGGTTCACATCATAGATTTCGACATCAAGCAAGGGCTGCAGTGGCCCAGTTTGTTCCAGAGTTTGGCGTCGAGGACCAATCCTCCGAGCCATGTTAGGATCACAGGGATAGGGGAGTCGAAGCAAGAGCTCAACGAGACGGGAGATAGGCTTGCTGGATTTGCTGGGGCACTGAACCTACCTTTTGAGTTCCACCCAGTTGTGGATAGGTTGGAGGATGTGAGGCTTTGGATGCTTCATGTCAAGGAGCATGAGAGTGTGGCTGTGAATTGTGTTTTCCAACTGCACAAGACGCTTTATGACGCAACAGGAGGAGCGCTGAGGGATTTTTTGGGACTCATTCGAAGTACAAACCCAGCAATAGTCCTTATGGCAGAGCAAGAGGCCGAGCACAATGAGTCCAAGTTGGAGACAAGAGTCTCCAACTCATTGAAGTACTACTCTGCCATCTTTGACTCGATTGGTTCTAGTCTTCCCTTTGAGAGCCAGGCCAGGATCAAAGTAGAGGAGATGTTTGCACAAGAAATTAGGAACATCATTGCTTGTGAAGGAAGCGACAGGCTGGAGAGGCACGAGAGCTTTGAGAAGTGGAGGAAGTTGATGGAGCAAGAAGGGTTTCGATGCGTTGGGATAACGGAGAGGGAAATGCTTCAGAGCCAGTTTCTGTTAAAGATGTATGCTAGTGAGAATTACACCGTGAAGAAGCAAGAGAAAGACGGAGCAGCAGAAGCACTTACTCTAAGTTGGATGGATCAGCCGCTTTACACAGTCTCAGCATGGACACCAGTTGATGCAGCAGGCAGCTCGTCATCATTTTCGCAACCAATCCATTGTTGCATACAGAAAAAAGGGATACAGAATTCTTTGTATGTAGGGGAAATCTGTCACAAGTATTCATTCATTCTTTTGTTGCAGATAAATCTTCGTCCGATAGTGTTGATATTTGATTTCAATTCTTTGCAGTCCATGTTGTTGTTAGTATTCAGAGTCAATCCAATTTCTGTTTATTCTTTGATTCTTTATGTAATGTTGAAATTCTTTATTAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0009966 GO:0009967 GO:0010468 GO:0010556 GO:0010646 GO:0010647 GO:0019219 GO:0019222 GO:0023051 GO:0023056 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1900457 GO:1900459 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

742

Amino Acids

82.02

Weight (kDa)

5.74

Isoelectric Point (pI)

52.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	284 - 653	8.4e-127	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013353)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63100 AT1G63100
fragaria_vesca	FvH4_5g01550
malus_domestica	MD04G1066800.v1.1 MD06G1073500.v1.1
prunus_persica	Prupe.5G091700_v2.0.a1
pyrus_communis	pycom04g06010 pycom06g07270
rosa_chinensis	RchiOBHm_Chr7g0199131
rosa_laevigata	RLG00000003812
rosa_multiflora	Rmu_sc0006266.1_g000052
rosa_roxburghii	Rroxscaffold_3G00257050
rosa_rugosa	Rorug07G0052900
rosa_samantha	Rh7AG176400 Rh7BG179900 Rh7CG185500 Rh7DG179400
rosa_wichuraiana	Rw7G015510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	706, 1240
AccII	CGCG	1 cut(s)	320
AclWI	GGATC	4 cut(s)	676, 1283, 1679, 1935
AcsI	RAATTY	4 cut(s)	442, 1121, 2035, 2210
AcuI	CTGAAG	2 cut(s)	212, 1811
AcyI	GRCGYC	1 cut(s)	1244
AfaI	GTAC	4 cut(s)	685, 757, 1525, 1613
AfeI	AGCGCT	1 cut(s)	1494
AfiI	CCNNNNNNNGG	5 cut(s)	655, 706, 782, 1240, 1378
AflIII	ACRYGT	1 cut(s)	503
AgsI	TTSAA	6 cut(s)	892, 1140, 1166, 1609, 2128, 2209
AjnI	CCWGG	4 cut(s)	457, 1101, 1662, 1667
Alw21I	GWGCWC	4 cut(s)	17, 110, 1308, 1569
Alw26I	GTCTC	5 cut(s)	254, 1307, 1580, 1600, 1951
AlwI	GGATC	4 cut(s)	676, 1283, 1679, 1935
AlwNI	CAGNNNCTG	1 cut(s)	1840
Aor51HI	AGCGCT	1 cut(s)	1494
AoxI	GGCC	5 cut(s)	424, 1019, 1220, 1560, 1665
ApeKI	GCWGC	9 cut(s)	62, 65, 208, 556, 902, 1213, 1898, 1970, 1977
ApoI	RAATTY	4 cut(s)	442, 1121, 2035, 2210
Asp700I	GAANNNNTTC	3 cut(s)	314, 1791, 1824
AspLEI	GCGC	1 cut(s)	1495
AspS9I	GGNCC	3 cut(s)	230, 1221, 1251
AsuHPI	GGTGA	2 cut(s)	27, 404
AsuII	TTCGAA	2 cut(s)	170, 1519
AsuNHI	GCTAGC	1 cut(s)	644
AvaII	GGWCC	2 cut(s)	230, 1251
BaeGI	GKGCMC	1 cut(s)	1348
BanII	GRGCYC	1 cut(s)	1308
BauI	CACGAG	1 cut(s)	1748
BbsI	GAAGAC	1 cut(s)	1640
Bbv12I	GWGCWC	4 cut(s)	17, 110, 1308, 1569
BbvCI	CCTCAGC	2 cut(s)	1088, 1496
BbvI	GCAGC	9 cut(s)	74, 77, 195, 568, 914, 1200, 1910, 1982, 1989
BccI	CCATC	6 cut(s)	106, 474, 623, 1631, 1771, 1918
BceAI	ACGGC	3 cut(s)	255, 412, 633
BcgI	CGANNNNNNTGC	2 cut(s)	1962, 1996
BciT130I	CCWGG	4 cut(s)	459, 1103, 1664, 1669
BciVI	GTATCC	1 cut(s)	2022
BclI	TGATCA	1 cut(s)	280
BcoDI	GTCTC	5 cut(s)	254, 1307, 1580, 1600, 1951
BfaI	CTAG	5 cut(s)	18, 645, 839, 1644, 1857
BfmI	CTRYAG	1 cut(s)	1214
BfoI	RGCGCY	1 cut(s)	1496
BfuI	GTATCC	1 cut(s)	2022
BmcAI	AGTACT	2 cut(s)	685, 1613
Bme1390I	CCNGG	4 cut(s)	459, 1103, 1664, 1669
Bme18I	GGWCC	2 cut(s)	230, 1251
BmgT120I	GGNCC	3 cut(s)	230, 1221, 1251
BmiI	GGNNCC	1 cut(s)	324
BmrFI	CCNGG	4 cut(s)	459, 1103, 1664, 1669
BmrI	ACTGGG	3 cut(s)	64, 1218, 1367
BmsI	GCATC	6 cut(s)	210, 844, 1030, 1398, 1787, 1957
BmtI	GCTAGC	1 cut(s)	648
BmuI	ACTGGG	3 cut(s)	64, 1218, 1367
BoxI	GACNNNNGTC	1 cut(s)	1592
BpiI	GAAGAC	1 cut(s)	1640
BplI	GAGNNNNNCTC	2 cut(s)	716, 748
BpmI	CTGGAG	1 cut(s)	1760
Bpu10I	CCTNAGC	2 cut(s)	1088, 1496
Bpu14I	TTCGAA	2 cut(s)	170, 1519
BpuEI	CTTGAG	1 cut(s)	139
Bsa29I	ATCGAT	3 cut(s)	161, 165, 1038
BsaHI	GRCGYC	1 cut(s)	1244
BsaJI	CCNNGG	3 cut(s)	38, 581, 649
BsaXI	ACNNNNNCTCC	6 cut(s)	472, 502, 777, 807, 1243, 1273
Bsc4I	CCNNNNNNNGG	5 cut(s)	655, 706, 782, 1240, 1378
Bse118I	RCCGGY	2 cut(s)	325, 966
Bse1I	ACTGG	5 cut(s)	70, 1224, 1373, 1834, 1961
Bse3DI	GCAATG	2 cut(s)	897, 1713
BseBI	CCWGG	4 cut(s)	459, 1103, 1664, 1669
BseCI	ATCGAT	3 cut(s)	161, 165, 1038
BseDI	CCNNGG	3 cut(s)	38, 581, 649
BseGI	GGATG	9 cut(s)	201, 337, 520, 634, 820, 1072, 1399, 1413, 1929
BseLI	CCNNNNNNNGG	5 cut(s)	655, 706, 782, 1240, 1378
BseMI	GCAATG	2 cut(s)	897, 1713
BseMII	CTCAG	8 cut(s)	497, 594, 978, 992, 1079, 1145, 1487, 1962
BseNI	ACTGG	5 cut(s)	70, 1224, 1373, 1834, 1961
BseRI	GAGGAG	9 cut(s)	67, 204, 560, 798, 818, 821, 824, 1503, 1697
BseSI	GKGCMC	1 cut(s)	1348
BseXI	GCAGC	9 cut(s)	74, 77, 195, 568, 914, 1200, 1910, 1982, 1989
BseYI	CCCAGC	3 cut(s)	8, 1340, 1531
BsgI	GTGCAG	1 cut(s)	1445
Bsh1236I	CGCG	1 cut(s)	320
Bsh1285I	CGRYCG	1 cut(s)	165
BshFI	GGCC	5 cut(s)	426, 1021, 1222, 1562, 1667
BshVI	ATCGAT	3 cut(s)	161, 165, 1038
BsiEI	CGRYCG	1 cut(s)	165
BsiHKAI	GWGCWC	4 cut(s)	17, 110, 1308, 1569
BsiSI	CCGG	4 cut(s)	205, 326, 539, 967
BslFI	GGGAC	2 cut(s)	758, 1524
BslI	CCNNNNNNNGG	5 cut(s)	655, 706, 782, 1240, 1378
BsmAI	GTCTC	5 cut(s)	254, 1307, 1580, 1600, 1951
BsmBI	CGTCTC	1 cut(s)	1307
BsmFI	GGGAC	2 cut(s)	758, 1524
BsnI	GGCC	5 cut(s)	426, 1021, 1222, 1562, 1667
Bsp119I	TTCGAA	2 cut(s)	170, 1519
Bsp1286I	GDGCHC	5 cut(s)	17, 110, 1308, 1348, 1569
Bsp143I	GATC	9 cut(s)	158, 162, 280, 668, 1035, 1057, 1275, 1671, 1927
BspANI	GGCC	5 cut(s)	426, 1021, 1222, 1562, 1667
BspCNI	CTCAG	8 cut(s)	496, 595, 979, 993, 1080, 1146, 1488, 1961
BspDI	ATCGAT	3 cut(s)	161, 165, 1038
BspFNI	CGCG	1 cut(s)	320
BspHI	TCATGA	1 cut(s)	277
BspLI	GGNNCC	1 cut(s)	324
BspMAI	CTGCAG	1 cut(s)	1218
BspOI	GCTAGC	1 cut(s)	648
BspPI	GGATC	4 cut(s)	676, 1283, 1679, 1935
BspT104I	TTCGAA	2 cut(s)	170, 1519
BsrDI	GCAATG	2 cut(s)	897, 1713
BsrFI	RCCGGY	2 cut(s)	325, 966
BsrI	ACTGG	5 cut(s)	70, 1224, 1373, 1834, 1961
BssAI	RCCGGY	2 cut(s)	325, 966
BssECI	CCNNGG	3 cut(s)	38, 581, 649
BssMI	GATC	9 cut(s)	158, 162, 280, 668, 1035, 1057, 1275, 1671, 1927
BssNI	GRCGYC	1 cut(s)	1244
BssSI	CACGAG	1 cut(s)	1748
BssT1I	CCWWGG	2 cut(s)	38, 581
Bst2BI	CACGAG	1 cut(s)	1748
Bst2UI	CCWGG	4 cut(s)	459, 1103, 1664, 1669
Bst4CI	ACNGT	3 cut(s)	755, 1873, 1945
Bst6I	CTCTTC	4 cut(s)	296, 305, 513, 567
BstACI	GRCGYC	1 cut(s)	1244
BstAPI	GCANNNNNTGC	1 cut(s)	1213
BstBI	TTCGAA	2 cut(s)	170, 1519
BstC8I	GCNNGC	9 cut(s)	82, 110, 178, 646, 860, 939, 968, 1329, 1975
BstDSI	CCRYGG	1 cut(s)	649
BstF5I	GGATG	9 cut(s)	201, 337, 520, 634, 820, 1072, 1399, 1413, 1929
BstFNI	CGCG	1 cut(s)	320
BstH2I	RGCGCY	1 cut(s)	1496
BstHHI	GCGC	1 cut(s)	1495
BstKTI	GATC	9 cut(s)	161, 165, 283, 671, 1038, 1060, 1278, 1674, 1930
BstMAI	GTCTC	5 cut(s)	254, 1307, 1580, 1600, 1951
BstMBI	GATC	9 cut(s)	158, 162, 280, 668, 1035, 1057, 1275, 1671, 1927
BstMCI	CGRYCG	1 cut(s)	165
BstNI	CCWGG	4 cut(s)	459, 1103, 1664, 1669
BstNSI	RCATGY	1 cut(s)	507
BstPAI	GACNNNNGTC	1 cut(s)	1592
BstSCI	CCNGG	4 cut(s)	457, 1101, 1662, 1667
BstSFI	CTRYAG	1 cut(s)	1214
BstSLI	GKGCMC	1 cut(s)	1348
BstUI	CGCG	1 cut(s)	320
BstV1I	GCAGC	9 cut(s)	74, 77, 195, 568, 914, 1200, 1910, 1982, 1989
BstV2I	GAAGAC	1 cut(s)	1640
BstXI	CCANNNNNNTGG	1 cut(s)	434
Bsu15I	ATCGAT	3 cut(s)	161, 165, 1038
BsuI	GTATCC	1 cut(s)	2022
BsuRI	GGCC	5 cut(s)	426, 1021, 1222, 1562, 1667
BsuTUI	ATCGAT	3 cut(s)	161, 165, 1038
BtgI	CCRYGG	1 cut(s)	649
BtsCI	GGATG	9 cut(s)	201, 337, 520, 634, 820, 1072, 1399, 1413, 1929
BtsI	GCAGTG	1 cut(s)	1223
BtsIMutI	CAGTG	3 cut(s)	984, 1223, 1346
Cac8I	GCNNGC	9 cut(s)	82, 110, 178, 646, 860, 939, 968, 1329, 1975
CaiI	CAGNNNCTG	1 cut(s)	1840
CciI	TCATGA	1 cut(s)	277
CfoI	GCGC	1 cut(s)	1495
Cfr10I	RCCGGY	2 cut(s)	325, 966
Cfr13I	GGNCC	3 cut(s)	230, 1221, 1251
ClaI	ATCGAT	3 cut(s)	161, 165, 1038
CseI	GACGC	3 cut(s)	1233, 1477, 1487
CsiI	ACCWGGT	1 cut(s)	1101
Csp6I	GTAC	4 cut(s)	684, 756, 1524, 1612
CviAII	CATG	9 cut(s)	129, 278, 504, 1025, 1268, 1415, 1427, 1953, 2143
CviQI	GTAC	4 cut(s)	684, 756, 1524, 1612
DpnI	GATC	9 cut(s)	160, 164, 282, 670, 1037, 1059, 1277, 1673, 1929
DpnII	GATC	9 cut(s)	158, 162, 280, 668, 1035, 1057, 1275, 1671, 1927
Eam1104I	CTCTTC	4 cut(s)	296, 305, 513, 567
EarI	CTCTTC	4 cut(s)	296, 305, 513, 567
Ecl136II	GAGCTC	1 cut(s)	1306
Eco130I	CCWWGG	2 cut(s)	38, 581
Eco24I	GRGCYC	1 cut(s)	1308
Eco47I	GGWCC	2 cut(s)	230, 1251
Eco47III	AGCGCT	1 cut(s)	1494
Eco53kI	GAGCTC	1 cut(s)	1306
Eco57I	CTGAAG	2 cut(s)	212, 1811
EcoICRI	GAGCTC	1 cut(s)	1306
EcoRI	GAATTC	1 cut(s)	2035
EcoRII	CCWGG	4 cut(s)	457, 1101, 1662, 1667
EcoT14I	CCWWGG	2 cut(s)	38, 581
EcoT38I	GRGCYC	1 cut(s)	1308
ErhI	CCWWGG	2 cut(s)	38, 581
Esp3I	CGTCTC	1 cut(s)	1307
FaeI	CATG	9 cut(s)	132, 281, 507, 1028, 1271, 1418, 1430, 1956, 2146
FaqI	GGGAC	2 cut(s)	758, 1524
FatI	CATG	9 cut(s)	128, 277, 503, 1024, 1267, 1414, 1426, 1952, 2142
FauI	CCCGC	2 cut(s)	149, 169
FbaI	TGATCA	1 cut(s)	280
FokI	GGATG	9 cut(s)	188, 344, 527, 641, 827, 1079, 1406, 1420, 1936
FriOI	GRGCYC	1 cut(s)	1308
FspBI	CTAG	5 cut(s)	18, 645, 839, 1644, 1857
GlaI	GCGC	1 cut(s)	1494
GsaI	CCCAGC	3 cut(s)	12, 1344, 1535
GsuI	CTGGAG	1 cut(s)	1760
HaeII	RGCGCY	1 cut(s)	1496
HaeIII	GGCC	5 cut(s)	426, 1021, 1222, 1562, 1667
HapII	CCGG	4 cut(s)	205, 326, 539, 967
HgaI	GACGC	3 cut(s)	1233, 1477, 1487
HhaI	GCGC	1 cut(s)	1495
Hin1I	GRCGYC	1 cut(s)	1244
Hin1II	CATG	9 cut(s)	132, 281, 507, 1028, 1271, 1418, 1430, 1956, 2146
Hin6I	GCGC	1 cut(s)	1493
HinP1I	GCGC	1 cut(s)	1493
HindIII	AAGCTT	1 cut(s)	78
HpaII	CCGG	4 cut(s)	205, 326, 539, 967
HphI	GGTGA	2 cut(s)	27, 404
Hpy166II	GTNNAC	1 cut(s)	1183
Hpy188III	TCNNGA	3 cut(s)	156, 278, 1234
Hpy8I	GTNNAC	1 cut(s)	1183
Hpy99I	CGWCG	2 cut(s)	694, 1249
HpyCH4III	ACNGT	3 cut(s)	755, 1873, 1945
Hsp92I	GRCGYC	1 cut(s)	1244
Hsp92II	CATG	9 cut(s)	132, 281, 507, 1028, 1271, 1418, 1430, 1956, 2146
HspAI	GCGC	1 cut(s)	1493
KroI	GCCGGC	1 cut(s)	966
KroNI	GCCGGC	1 cut(s)	968
Ksp22I	TGATCA	1 cut(s)	280
Kzo9I	GATC	9 cut(s)	158, 162, 280, 668, 1035, 1057, 1275, 1671, 1927
LmnI	GCTCC	8 cut(s)	322, 785, 934, 1048, 1423, 1490, 1780, 1895
Lsp1109I	GCAGC	9 cut(s)	74, 77, 195, 568, 914, 1200, 1910, 1982, 1989
LweI	GCATC	6 cut(s)	210, 844, 1030, 1398, 1787, 1957
MabI	ACCWGGT	1 cut(s)	1101
MaeI	CTAG	5 cut(s)	18, 645, 839, 1644, 1857
MaeIII	GTNAC	8 cut(s)	33, 72, 235, 392, 598, 749, 1006, 2060
MalI	GATC	9 cut(s)	160, 164, 282, 670, 1037, 1059, 1277, 1673, 1929
MboI	GATC	9 cut(s)	158, 162, 280, 668, 1035, 1057, 1275, 1671, 1927
MfeI	CAATTG	3 cut(s)	428, 594, 882
MhlI	GDGCHC	5 cut(s)	17, 110, 1308, 1348, 1569
MmeI	TCCRAC	8 cut(s)	500, 567, 672, 1368, 1480, 1563, 1623, 1901
MroNI	GCCGGC	1 cut(s)	966
MroXI	GAANNNNTTC	3 cut(s)	314, 1791, 1824
MseI	TTAA	2 cut(s)	1844, 2220
MslI	CAYNNNNRTG	1 cut(s)	1431
MspA1I	CMGCKG	2 cut(s)	228, 248
MspI	CCGG	4 cut(s)	205, 326, 539, 967
MspR9I	CCNGG	4 cut(s)	459, 1103, 1664, 1669
MunI	CAATTG	3 cut(s)	428, 594, 882
MvaI	CCWGG	4 cut(s)	459, 1103, 1664, 1669
MvnI	CGCG	1 cut(s)	320
NaeI	GCCGGC	1 cut(s)	968
NdeII	GATC	9 cut(s)	158, 162, 280, 668, 1035, 1057, 1275, 1671, 1927
NgoMIV	GCCGGC	1 cut(s)	966
NheI	GCTAGC	1 cut(s)	644
NlaIII	CATG	9 cut(s)	132, 281, 507, 1028, 1271, 1418, 1430, 1956, 2146
NlaIV	GGNNCC	1 cut(s)	324
NmeAIII	GCCGAG	1 cut(s)	1588
NmuCI	GTSAC	6 cut(s)	33, 235, 392, 598, 1006, 2060
NspI	RCATGY	1 cut(s)	507
NspV	TTCGAA	2 cut(s)	170, 1519
PagI	TCATGA	1 cut(s)	277
PciI	ACATGT	1 cut(s)	503
PcsI	WCGNNNNNNNCGW	2 cut(s)	167, 686
PdiI	GCCGGC	1 cut(s)	968
PdmI	GAANNNNTTC	3 cut(s)	314, 1791, 1824
PfeI	GAWTC	4 cut(s)	167, 274, 763, 2191
PflMI	CCANNNNNTGG	2 cut(s)	706, 1240
Ple19I	CGATCG	1 cut(s)	165
PscI	ACATGT	1 cut(s)	503
PshAI	GACNNNNGTC	1 cut(s)	1592
Psp124BI	GAGCTC	1 cut(s)	1308
Psp6I	CCWGG	4 cut(s)	457, 1101, 1662, 1667
PspFI	CCCAGC	3 cut(s)	8, 1340, 1531
PspGI	CCWGG	4 cut(s)	457, 1101, 1662, 1667
PspN4I	GGNNCC	1 cut(s)	324
PspPI	GGNCC	3 cut(s)	230, 1221, 1251
PstI	CTGCAG	1 cut(s)	1218
PstNI	CAGNNNCTG	1 cut(s)	1840
PvuI	CGATCG	1 cut(s)	165
RsaI	GTAC	4 cut(s)	685, 757, 1525, 1613
RsaNI	GTAC	4 cut(s)	684, 756, 1524, 1612
RseI	CAYNNNNRTG	1 cut(s)	1431
SacI	GAGCTC	1 cut(s)	1308
SaqAI	TTAA	2 cut(s)	1844, 2220
Sau3AI	GATC	9 cut(s)	158, 162, 280, 668, 1035, 1057, 1275, 1671, 1927
Sau96I	GGNCC	3 cut(s)	230, 1221, 1251
ScaI	AGTACT	2 cut(s)	685, 1613
ScrFI	CCNGG	4 cut(s)	459, 1103, 1664, 1669
SduI	GDGCHC	5 cut(s)	17, 110, 1308, 1348, 1569
SexAI	ACCWGGT	1 cut(s)	1101
SfaNI	GCATC	6 cut(s)	210, 844, 1030, 1398, 1787, 1957
SfcI	CTRYAG	1 cut(s)	1214
SfuI	TTCGAA	2 cut(s)	170, 1519
SinI	GGWCC	2 cut(s)	230, 1251
SmiMI	CAYNNNNRTG	1 cut(s)	1431
SmlI	CTYRAG	1 cut(s)	154
SmoI	CTYRAG	1 cut(s)	154
SspMI	CTAG	5 cut(s)	18, 645, 839, 1644, 1857
SstI	GAGCTC	1 cut(s)	1308
StyD4I	CCNGG	4 cut(s)	457, 1101, 1662, 1667
StyI	CCWWGG	2 cut(s)	38, 581
TaaI	ACNGT	3 cut(s)	755, 1873, 1945
TatI	WGTACW	3 cut(s)	683, 1523, 1611
TauI	GCSGC	5 cut(s)	251, 408, 636, 639, 1936
TfiI	GAWTC	4 cut(s)	167, 274, 763, 2191
Tru1I	TTAA	2 cut(s)	1844, 2220
Tru9I	TTAA	2 cut(s)	1844, 2220
TscAI	CASTG	3 cut(s)	991, 1223, 1353
TseFI	GTSAC	6 cut(s)	33, 235, 392, 598, 1006, 2060
TseI	GCWGC	9 cut(s)	62, 65, 208, 556, 902, 1213, 1898, 1970, 1977
Tsp45I	GTSAC	6 cut(s)	33, 235, 392, 598, 1006, 2060
TspDTI	ATGAA	5 cut(s)	531, 1118, 1403, 2061, 2065
TspGWI	ACGGA	4 cut(s)	480, 555, 1826, 1908
TspRI	CASTG	3 cut(s)	991, 1223, 1353
Van91I	CCANNNNNTGG	2 cut(s)	706, 1240
VpaK11BI	GGWCC	2 cut(s)	230, 1251
XapI	RAATTY	4 cut(s)	442, 1121, 2035, 2210
XceI	RCATGY	1 cut(s)	507
XcmI	CCANNNNNNNNNTGG	1 cut(s)	434
XmnI	GAANNNNTTC	3 cut(s)	314, 1791, 1824
XspI	CTAG	5 cut(s)	18, 645, 839, 1644, 1857
ZrmI	AGTACT	2 cut(s)	685, 1613

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.