pycom04g17460

ABC transporter G family member

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
19843657 .. 19847039
3383 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g17460.5

Sequence Viewer

Length: 1530 bp
ATGGGGCCTTCTGGTTCTGGGAAGTCTACTTTGCTTGATGCTCTGTCGAGTCGGTTGGCCGCCAATGCTTTTCTTTCTGGTACTATTCTGCTCAATGGCCGCAAACGGAAGCTCTCTTTTGGCACTGCTGCCTATGTGACCCAAGATGACAATTTGATTGGAACTTTAACGGTGCGAGAGACGATTTCTTATTCGGCAAGACTAAGGCGGCCGGATAAGATGGCTTGGTCCGAAAAGCGGGCACTGGTTGAGAGTACAATCATAGAGATGGGACTGCAGGATTGCGCCGACACAGTTATTGGAAATTGGCATTTGCGTGGGATCAGTGGGGGAGAGAAGAGAAGGGTCAGCATTGCTCTTGAAACCTTGACGAGGCCTAGATTGCTCTTCCTAGATGAGCCAAGCGGACTTGATAGTGCTTCGGCGTTTTTCGTGACTCAGACATTACGCGCCCTGGCACGAGACGGAAGGACTGTCATAGCCTCAATTCACCAACCTAGTAGTGAAGCCTTTGAACTGTTTGATCAACTGTACTTGCTTTCTAGCGGCAAAACAGTCTATTTTGGTCAGGCGGCGGACGCATATGAGTTCTTTGCACAAGCTGGCTTTCCGTGCCCTGCTTTGAGGAACCCATCTGATCATTTTCTTAGATGCATAAACTCCGACTTCGACAAAGTAAAGGCCACACTGAAAGGGTCCATGAAACTCAGGTTCGAGGCAAGTGATGACCCGTTGGAGAAGATTACCACTGCTGAAGCTATAAGAGTTCTTATTGATTCCTATCGTTCTTCTCAATACTCGTACACAGCTAGAGAAAAAGTTGAGGAGATATCGAAAGTTAAAGGAACTGTGCTAGATTCTGGAGGAAGTCAGGCTAGTTTCTTTATGCAGGCCTTCCAATTGTCCAAGCGTTCGTTTATCAATATGTCGAGGGACTTTGGATACTATTGGCTCAGGCTCGTCATTTACATTGTCGTCACAGTTTGTATCGGAGCCATCTATTTGAATGTGGGAACAGGTTACAGTTCGATTCTGGCACGGGGTTCATGTGCATCTTTCGTCTTTGGTTTTGTCACGTTCATGTCAATTGGCGGGTTTCCTTCTTTTGTAGAGGATATGAAGGTTTTCCAAAGAGAGAGGCTGAACGGCCACTACGGCGTTACTGCATTTGTCATCAGCAACACGCTCTCTGCAATGCCATTCCTGATACTAATTACCTTTCTCGCTGGAACTGTCTGTTACTTCATGGTCCGGCTCCACCCGGGCTTTGAGCATTGTCTCTTCTTTGTGTTGTGCCTTTATGCAAGTGTCACTGTCGTTGAGAGCTTGATGATGGCGATAGCCAGCATCGTCCCCAACTTCCTCATGGGCATTATCATAGGGGCTAGAATTCAGGGTATCTTCATGTTAGTCTCCGGGTACTTCAGGCTCCCGAATGACATCCCAAAACCCATCTGGCGTTACCCTATGTCATACATCACATCAGCTTCCACTTCTGGGCTTTACAGGGACAATACCAGAATGACCTGA

Protein Analysis

510

Amino Acids

56.47

Weight (kDa)

9.12

Isoelectric Point (pI)

33.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010921)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 26
AccII CGCG 1 cut(s) 450
AciI CCGC 9 cut(s) 60, 100, 208, 238, 405, 546, 572, 575, 1092
AclWI GGATC 1 cut(s) 329
AcoI YGGCCR 4 cut(s) 57, 97, 209, 1147
AcsI RAATTY 1 cut(s) 1389
AcuI CTGAAG 2 cut(s) 774, 1408
AfaI GTAC 5 cut(s) 82, 256, 533, 803, 1421
AfiI CCNNNNNNNGG 3 cut(s) 237, 372, 1497
AgsI TTSAA 3 cut(s) 362, 515, 1006
AjnI CCWGG 1 cut(s) 453
AluBI AGCT 6 cut(s) 112, 602, 758, 809, 1326, 1487
AluI AGCT 6 cut(s) 112, 602, 758, 809, 1326, 1487
Alw26I GTCTC 4 cut(s) 173, 456, 1283, 1417
AlwI GGATC 1 cut(s) 329
Ama87I CYCGRG 1 cut(s) 1261
AoxI GGCC 8 cut(s) 5, 57, 97, 209, 374, 681, 891, 1147
ApeKI GCWGC 1 cut(s) 128
ApoI RAATTY 1 cut(s) 1389
Asp700I GAANNNNTTC 1 cut(s) 1124
AspLEI GCGC 2 cut(s) 287, 452
AspS9I GGNCC 4 cut(s) 5, 228, 696, 1249
AsuC2I CCSGG 3 cut(s) 1262, 1263, 1417
AsuHPI GGTGA 1 cut(s) 482
AvaI CYCGRG 1 cut(s) 1261
AvaII GGWCC 3 cut(s) 228, 696, 1249
BaeGI GKGCMC 2 cut(s) 244, 617
BauI CACGAG 1 cut(s) 459
BbvI GCAGC 1 cut(s) 115
BccI CCATC 6 cut(s) 214, 262, 640, 1004, 1327, 1460
BceAI ACGGC 2 cut(s) 1162, 1171
BciT130I CCWGG 1 cut(s) 455
BciVI GTATCC 1 cut(s) 935
BclI TGATCA 2 cut(s) 523, 637
BcnI CCSGG 3 cut(s) 1262, 1263, 1417
BcoDI GTCTC 4 cut(s) 173, 456, 1283, 1417
BfaI CTAG 8 cut(s) 378, 392, 498, 543, 810, 854, 876, 1386
BfmI CTRYAG 1 cut(s) 275
BfuI GTATCC 1 cut(s) 935
BglI GCCNNNNNGGC 1 cut(s) 1155
BisI GCNGC 6 cut(s) 60, 100, 129, 209, 547, 573
BlsI GCNGC 6 cut(s) 61, 101, 130, 210, 548, 574
Bme1390I CCNGG 4 cut(s) 455, 1262, 1263, 1417
Bme18I GGWCC 3 cut(s) 228, 696, 1249
BmeT110I CYCGRG 1 cut(s) 1261
BmgT120I GGNCC 4 cut(s) 5, 228, 696, 1249
BmiI GGNNCC 6 cut(s) 6, 629, 697, 994, 1256, 1430
BmrFI CCNGG 4 cut(s) 455, 1262, 1263, 1417
BmsI GCATC 4 cut(s) 28, 641, 1061, 1356
BpmI CTGGAG 1 cut(s) 882
Bpu10I CCTNAGC 1 cut(s) 953
BpuMI CCSGG 3 cut(s) 1262, 1263, 1417
BsaBI GATNNNNATC 1 cut(s) 780
BsaJI CCNNGG 2 cut(s) 453, 1261
Bsc4I CCNNNNNNNGG 3 cut(s) 237, 372, 1497
Bse1I ACTGG 1 cut(s) 249
Bse3DI GCAATG 2 cut(s) 351, 1200
Bse8I GATNNNNATC 1 cut(s) 780
BseBI CCWGG 1 cut(s) 455
BseDI CCNNGG 2 cut(s) 453, 1261
BseGI GGATG 1 cut(s) 1440
BseJI GATNNNNATC 1 cut(s) 780
BseLI CCNNNNNNNGG 3 cut(s) 237, 372, 1497
BseMI GCAATG 2 cut(s) 351, 1200
BseMII CTCAG 3 cut(s) 452, 721, 967
BseNI ACTGG 1 cut(s) 249
BseRI GAGGAG 1 cut(s) 839
BseSI GKGCMC 2 cut(s) 244, 617
BseX3I CGGCCG 1 cut(s) 209
BseXI GCAGC 1 cut(s) 115
Bsh1236I CGCG 1 cut(s) 450
Bsh1285I CGRYCG 1 cut(s) 212
BshFI GGCC 8 cut(s) 7, 59, 99, 211, 376, 683, 893, 1149
BsiEI CGRYCG 1 cut(s) 212
BsiHKCI CYCGRG 1 cut(s) 1261
BsiSI CCGG 4 cut(s) 212, 1252, 1262, 1416
BslFI GGGAC 4 cut(s) 285, 947, 1337, 1523
BslI CCNNNNNNNGG 3 cut(s) 237, 372, 1497
BsmAI GTCTC 4 cut(s) 173, 456, 1283, 1417
BsmBI CGTCTC 2 cut(s) 173, 456
BsmFI GGGAC 4 cut(s) 285, 947, 1337, 1523
BsnI GGCC 8 cut(s) 7, 59, 99, 211, 376, 683, 893, 1149
BsoBI CYCGRG 1 cut(s) 1261
Bsp1286I GDGCHC 2 cut(s) 244, 617
Bsp143I GATC 3 cut(s) 321, 523, 637
BspACI CCGC 9 cut(s) 60, 100, 208, 238, 405, 546, 572, 575, 1092
BspANI GGCC 8 cut(s) 7, 59, 99, 211, 376, 683, 893, 1149
BspCNI CTCAG 3 cut(s) 451, 720, 966
BspFNI CGCG 1 cut(s) 450
BspLI GGNNCC 6 cut(s) 6, 629, 697, 994, 1256, 1430
BspMAI CTGCAG 1 cut(s) 279
BspPI GGATC 1 cut(s) 329
BspQI GCTCTTC 1 cut(s) 392
BsrDI GCAATG 2 cut(s) 351, 1200
BsrI ACTGG 1 cut(s) 249
BssECI CCNNGG 2 cut(s) 453, 1261
BssMI GATC 3 cut(s) 321, 523, 637
BssSI CACGAG 1 cut(s) 459
Bst2BI CACGAG 1 cut(s) 459
Bst2UI CCWGG 1 cut(s) 455
Bst6I CTCTTC 3 cut(s) 332, 392, 1286
BstC8I GCNNGC 4 cut(s) 240, 604, 891, 1345
BstDEI CTNAG 5 cut(s) 203, 438, 647, 707, 953
BstENI CCTNNNNNAGG 1 cut(s) 370
BstF5I GGATG 1 cut(s) 1440
BstFNI CGCG 1 cut(s) 450
BstHHI GCGC 2 cut(s) 287, 452
BstKTI GATC 3 cut(s) 324, 526, 640
BstMAI GTCTC 4 cut(s) 173, 456, 1283, 1417
BstMBI GATC 3 cut(s) 321, 523, 637
BstMCI CGRYCG 1 cut(s) 212
BstMWI GCNNNNNNNGC 5 cut(s) 65, 382, 578, 612, 1155
BstNI CCWGG 1 cut(s) 455
BstSCI CCNGG 4 cut(s) 453, 1260, 1261, 1415
BstSFI CTRYAG 1 cut(s) 275
BstSLI GKGCMC 2 cut(s) 244, 617
BstUI CGCG 1 cut(s) 450
BstV1I GCAGC 1 cut(s) 115
BstZI CGGCCG 1 cut(s) 209
BsuI GTATCC 1 cut(s) 935
BsuRI GGCC 8 cut(s) 7, 59, 99, 211, 376, 683, 893, 1149
BtsCI GGATG 1 cut(s) 1440
BtsI GCAGTG 2 cut(s) 123, 747
BtsIMutI CAGTG 6 cut(s) 123, 242, 331, 686, 747, 1311
Cac8I GCNNGC 4 cut(s) 240, 604, 891, 1345
CfoI GCGC 2 cut(s) 287, 452
Cfr13I GGNCC 4 cut(s) 5, 228, 696, 1249
Cfr9I CCCGGG 1 cut(s) 1261
CseI GACGC 1 cut(s) 587
Csp6I GTAC 5 cut(s) 81, 255, 532, 802, 1420
CviAII CATG 6 cut(s) 700, 1047, 1081, 1246, 1366, 1405
CviQI GTAC 5 cut(s) 81, 255, 532, 802, 1420
DdeI CTNAG 5 cut(s) 203, 438, 647, 707, 953
DpnI GATC 3 cut(s) 323, 525, 639
DpnII GATC 3 cut(s) 321, 523, 637
EaeI YGGCCR 4 cut(s) 57, 97, 209, 1147
EagI CGGCCG 1 cut(s) 209
Eam1104I CTCTTC 3 cut(s) 332, 392, 1286
EarI CTCTTC 3 cut(s) 332, 392, 1286
EciI GGCGGA 1 cut(s) 590
EclXI CGGCCG 1 cut(s) 209
Eco147I AGGCCT 2 cut(s) 376, 893
Eco32I GATATC 1 cut(s) 831
Eco47I GGWCC 3 cut(s) 228, 696, 1249
Eco52I CGGCCG 1 cut(s) 209
Eco57I CTGAAG 2 cut(s) 774, 1408
Eco88I CYCGRG 1 cut(s) 1261
EcoNI CCTNNNNNAGG 1 cut(s) 370
EcoO109I RGGNCCY 1 cut(s) 5
EcoRI GAATTC 1 cut(s) 1389
EcoRII CCWGG 1 cut(s) 453
EcoRV GATATC 1 cut(s) 831
EcoT22I ATGCAT 1 cut(s) 656
Esp3I CGTCTC 2 cut(s) 173, 456
FaeI CATG 6 cut(s) 703, 1050, 1084, 1249, 1369, 1408
FaqI GGGAC 4 cut(s) 285, 947, 1337, 1523
FatI CATG 6 cut(s) 699, 1046, 1080, 1245, 1365, 1404
FauI CCCGC 2 cut(s) 231, 1085
FauNDI CATATG 1 cut(s) 583
FbaI TGATCA 2 cut(s) 523, 637
FblI GTMKAC 1 cut(s) 26
Fnu4HI GCNGC 6 cut(s) 60, 100, 129, 209, 547, 573
FokI GGATG 1 cut(s) 1427
Fsp4HI GCNGC 6 cut(s) 60, 100, 129, 209, 547, 573
FspBI CTAG 8 cut(s) 378, 392, 498, 543, 810, 854, 876, 1386
GlaI GCGC 2 cut(s) 286, 451
GluI GCNGC 6 cut(s) 60, 100, 129, 209, 547, 573
GsuI CTGGAG 1 cut(s) 882
HaeIII GGCC 8 cut(s) 7, 59, 99, 211, 376, 683, 893, 1149
HapII CCGG 4 cut(s) 212, 1252, 1262, 1416
HgaI GACGC 1 cut(s) 587
HhaI GCGC 2 cut(s) 287, 452
Hin1II CATG 6 cut(s) 703, 1050, 1084, 1249, 1369, 1408
Hin6I GCGC 2 cut(s) 285, 450
HinP1I GCGC 2 cut(s) 285, 450
HinfI GANTC 5 cut(s) 49, 436, 776, 857, 1030
HpaII CCGG 4 cut(s) 212, 1252, 1262, 1416
HphI GGTGA 1 cut(s) 482
Hpy166II GTNNAC 2 cut(s) 27, 804
Hpy188I TCNGA 5 cut(s) 232, 441, 637, 664, 992
Hpy188III TCNNGA 5 cut(s) 359, 433, 861, 1204, 1432
Hpy8I GTNNAC 2 cut(s) 27, 804
HpyAV CCTTC 6 cut(s) 18, 336, 462, 904, 1110, 1114
HpyCH4IV ACGT 1 cut(s) 1076
HpyCH4V TGCA 8 cut(s) 277, 596, 654, 889, 1052, 1166, 1193, 1304
HpyF10VI GCNNNNNNNGC 5 cut(s) 65, 382, 578, 612, 1155
HpyF3I CTNAG 5 cut(s) 203, 438, 647, 707, 953
HpySE526I ACGT 1 cut(s) 1076
Hsp92II CATG 6 cut(s) 703, 1050, 1084, 1249, 1369, 1408
HspAI GCGC 2 cut(s) 285, 450
Ksp22I TGATCA 2 cut(s) 523, 637
Kzo9I GATC 3 cut(s) 321, 523, 637
LguI GCTCTTC 1 cut(s) 392
LmnI GCTCC 3 cut(s) 992, 1260, 1434
Lsp1109I GCAGC 1 cut(s) 115
LweI GCATC 4 cut(s) 28, 641, 1061, 1356
MaeI CTAG 8 cut(s) 378, 392, 498, 543, 810, 854, 876, 1386
MaeII ACGT 1 cut(s) 1076
MaeIII GTNAC 9 cut(s) 136, 433, 976, 1019, 1072, 1159, 1238, 1309, 1460
MalI GATC 3 cut(s) 323, 525, 639
MboI GATC 3 cut(s) 321, 523, 637
MboII GAAGA 6 cut(s) 349, 379, 751, 780, 1273, 1393
MfeI CAATTG 2 cut(s) 899, 1086
MhlI GDGCHC 2 cut(s) 244, 617
MluCI AATT 7 cut(s) 151, 304, 486, 899, 1086, 1212, 1389
MlyI GAGTC 2 cut(s) 58, 430
MmeI TCCRAC 2 cut(s) 687, 714
Mph1103I ATGCAT 1 cut(s) 656
MroXI GAANNNNTTC 1 cut(s) 1124
MseI TTAA 2 cut(s) 167, 840
MslI CAYNNNNRTG 3 cut(s) 266, 315, 1079
MspI CCGG 4 cut(s) 212, 1252, 1262, 1416
MspR9I CCNGG 4 cut(s) 455, 1262, 1263, 1417
MunI CAATTG 2 cut(s) 899, 1086
MvaI CCWGG 1 cut(s) 455
MvnI CGCG 1 cut(s) 450
MwoI GCNNNNNNNGC 5 cut(s) 65, 382, 578, 612, 1155
NciI CCSGG 3 cut(s) 1262, 1263, 1417
NdeI CATATG 1 cut(s) 583
NdeII GATC 3 cut(s) 321, 523, 637
NlaIII CATG 6 cut(s) 703, 1050, 1084, 1249, 1369, 1408
NlaIV GGNNCC 6 cut(s) 6, 629, 697, 994, 1256, 1430
NmuCI GTSAC 5 cut(s) 136, 433, 976, 1072, 1309
NsiI ATGCAT 1 cut(s) 656
PceI AGGCCT 2 cut(s) 376, 893
PciSI GCTCTTC 1 cut(s) 392
PdmI GAANNNNTTC 1 cut(s) 1124
PfeI GAWTC 3 cut(s) 776, 857, 1030
PkrI GCNGC 6 cut(s) 61, 101, 130, 210, 548, 574
PleI GAGTC 2 cut(s) 57, 430
PpsI GAGTC 2 cut(s) 57, 430
Psp6I CCWGG 1 cut(s) 453
PspGI CCWGG 1 cut(s) 453
PspN4I GGNNCC 6 cut(s) 6, 629, 697, 994, 1256, 1430
PspPI GGNCC 4 cut(s) 5, 228, 696, 1249
PsrI GAACNNNNNNTAC 2 cut(s) 1136, 1168
PstI CTGCAG 1 cut(s) 279
RsaI GTAC 5 cut(s) 82, 256, 533, 803, 1421
RsaNI GTAC 5 cut(s) 81, 255, 532, 802, 1420
RseI CAYNNNNRTG 3 cut(s) 266, 315, 1079
SapI GCTCTTC 1 cut(s) 392
SaqAI TTAA 2 cut(s) 167, 840
SatI GCNGC 6 cut(s) 60, 100, 129, 209, 547, 573
Sau3AI GATC 3 cut(s) 321, 523, 637
Sau96I GGNCC 4 cut(s) 5, 228, 696, 1249
SchI GAGTC 2 cut(s) 58, 430
ScrFI CCNGG 4 cut(s) 455, 1262, 1263, 1417
SduI GDGCHC 2 cut(s) 244, 617
SfaNI GCATC 4 cut(s) 28, 641, 1061, 1356
SfcI CTRYAG 1 cut(s) 275
SinI GGWCC 3 cut(s) 228, 696, 1249
SmaI CCCGGG 1 cut(s) 1263
SmiMI CAYNNNNRTG 3 cut(s) 266, 315, 1079
Sse9I AATT 7 cut(s) 151, 304, 486, 899, 1086, 1212, 1389
SseBI AGGCCT 2 cut(s) 376, 893
SsiI CCGC 9 cut(s) 60, 100, 208, 238, 405, 546, 572, 575, 1092
SspMI CTAG 8 cut(s) 378, 392, 498, 543, 810, 854, 876, 1386
StuI AGGCCT 2 cut(s) 376, 893
StyD4I CCNGG 4 cut(s) 453, 1260, 1261, 1415
TaiI ACGT 1 cut(s) 1079
TaqI TCGA 6 cut(s) 47, 669, 714, 833, 929, 1028
TasI AATT 7 cut(s) 151, 304, 486, 899, 1086, 1212, 1389
TatI WGTACW 2 cut(s) 254, 531
TauI GCSGC 5 cut(s) 62, 102, 211, 549, 575
TfiI GAWTC 3 cut(s) 776, 857, 1030
Tru1I TTAA 2 cut(s) 167, 840
Tru9I TTAA 2 cut(s) 167, 840
TscAI CASTG 6 cut(s) 130, 249, 331, 693, 754, 1318
TseFI GTSAC 5 cut(s) 136, 433, 976, 1072, 1309
TseI GCWGC 1 cut(s) 128
Tsp45I GTSAC 5 cut(s) 136, 433, 976, 1072, 1309
TspDTI ATGAA 6 cut(s) 716, 1035, 1069, 1133, 1234, 1393
TspGWI ACGGA 3 cut(s) 121, 480, 600
TspMI CCCGGG 1 cut(s) 1261
TspRI CASTG 6 cut(s) 130, 249, 331, 693, 754, 1318
VpaK11BI GGWCC 3 cut(s) 228, 696, 1249
XagI CCTNNNNNAGG 1 cut(s) 370
XapI RAATTY 1 cut(s) 1389
XcmI CCANNNNNNNNNTGG 2 cut(s) 1363, 1452
XmaI CCCGGG 1 cut(s) 1261
XmiI GTMKAC 1 cut(s) 26
XmnI GAANNNNTTC 1 cut(s) 1124
XspI CTAG 8 cut(s) 378, 392, 498, 543, 810, 854, 876, 1386
Zsp2I ATGCAT 1 cut(s) 656
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.