Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00549

Orthogroup ID

OG0010921

Physical Location & Seq

Genomic Coordinates Forward (+)

100992 .. 104184

Gene Structure 3193 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G012260.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2067 bp

ATGACGGAGAAGAGAAACCCAGCAGCAGAAAATGCTGTGATGGAGATAGAGAGCAGCAAGCCCTCTGGAAATGGGATTGTGGCTGATGGACTTAGTCCTCTGAGTGAAACTCTATGGAGGGAGAAGGTCAGTGTGGAAATAGTAGGGGATGTGTCGGCGAGGCTGACGTGGAATGATCTGACGGTGATGGTGACTCTGAGCAACGGTGAGACTCAGATGGTTTTGGAGGGTTTAACTGGTTATGCAGAACCTGGAAGCTTCACAGCTTTGATGGGCCCTTCTGGTTCGGGCAAATCAACCTTGCTTGATGCTCTCTCTAGCCGTTTGGCTTCCAATGCCTTCCTTTCTGGCTCTGTTTTACTCAATGGCAGCAAAAGAAAGCTCTCTTTCGGCACTGCTGCATATGTGACCCAAGATGACAATTTGATTGGGACTCTGACTGTAAGAGAGACGATATCATACTCGGCTAGATTGAGGCTGCCGGATAAGATGGGGAGGTCGGAGAAGCGAGCACTGGTGGAGAGGACAATCATAGAAATGGGTCTGCAGGATTGCGCCGATACAGTTATTGGGAATTGGCATTTGCGTGGGATCAGTGGGGGAGAGAAGAGAAGGGTCAGCATTGCTGTGGAGATCTTGATGAGGCCTAGATTGCTCTTTCTTGATGAGCCAACCAGTGGACTAGATAGTGCTTCAGCATTTTTTGTAACACAGACACTACGTGCTCTAACACGAGATGGAAGGACTGTGATAGCTTCAATTCACCAGCCAAGCAGTGAAGTCTTTGAACTATTTGATCAACTGTACTTGCTTTCTGGTGGTAAAACAGTTTACTTTGGTCAGGCCTCTGAGGCATATGAGTTCTTTTCACAAGCTGGTTTTCCCTGCCCTGCTTTGAGGAATCCATCTGATCATTTTCTTAGATGTGTAAACTCTGACTTTGATAAAGTAAAGGCCACACTGAAAGGGTCCATGAAACTCAGGAGTCCTGTTGATTCCTATCGTAGTTCGCAATACTCTTATGCAGCTACAGAAAAAGTTGCAGAGATATCCAAAGTTAAAGGGACTGTTTTAGACTCTGGAGGAAGTCAGGCTAGTTTCCTAATGCAGACCTTCACATTGACAAAGCGTTCATTTGTCAACATGTCAAGGGACTTTGGCTATTACTGGCTCAGGCTTGTCATTTACATTGTTGTTGTAGTTTGTATCGGAACCATCTATCTGAATATTGGAACTGGCTACGCTTCGATTCTGGCAAGGGGTTCATGTGCATCTTTTGTTTTTGGTTTTGTCACTTTCATGTCAATTGGCGGGTTTCCTTCATTTGTAGAGGACATGAAGGTTTTCCAAAGAGAGAGGTTGAATGGTCACTATGGTGTCACTGCTTTTGTCCTCAGCAACACATTCTCTGCAATGCCATTCCTGATACTGATTACCTTTCTGGTCGGAACTATCTGTTACTTCATGGTCGGTCTCCATCCAGGCTTCGAGCATTACTTCTTCTTTGTGGTGTGCTTCTATGCATGTGTCACTGTAGTTGAGAGCTTGATGATGGCGATAGCGAGCGTTATTCCTAACTTCCTCATGGGTATCATCATAGGGGCCGGAATTCAGGGCATATTCATGCTAGTCTCCGGCTACTTAAGGCTACCAAATGACATCCCTAAGCCAGTCTGGCGTTACCCGATGTCATACATCAGCTTCCACTTCTGGGCTTTACAGGGTCAATATCAGAATGACTTGGCCGGCTTAATGTTTGACAACGAGACACCGGATCAAATTAAGATACCAGGTGACTACATCCTAGTAAATGTGTTCCAGATTGACATCAGCAGATCAAAATGGATAGACCTTGGTGTTATATTCAGCATGATTGTTGCCTACCGGATCATCTTTTTCATCATGATCAAGTGCAGTGAGGATGTCTCACCTTGGATTCGTGGTTATATGGCGAGGAGAAGACTGCAACAGAAACATGCCAGCCAAAACACAAATATTGCCCCTGATGGTCTCACACAGTCCCCTTCTTTGAGGACCTACGCAACTGGTAAAAGGTTGACGAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005319 GO:0005342 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006950 GO:0006970 GO:0007275 GO:0007389 GO:0008028 GO:0008150 GO:0008509 GO:0008514 GO:0009611 GO:0009628 GO:0009651 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0009897 GO:0009965 GO:0009986 GO:0010016 GO:0010033 GO:0010051 GO:0010154 GO:0010222 GO:0010588 GO:0010876 GO:0015075 GO:0015245 GO:0015318 GO:0015399 GO:0015405 GO:0015711 GO:0015718 GO:0015849 GO:0015908 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0022804 GO:0022857 GO:0031224 GO:0032501 GO:0032502 GO:0033036 GO:0033993 GO:0034220 GO:0042221 GO:0042623 GO:0042626 GO:0042802 GO:0042803 GO:0043492 GO:0044425 GO:0044459 GO:0044464 GO:0046942 GO:0046943 GO:0046983 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071702 GO:0071944 GO:0080051 GO:0090698 GO:0097305 GO:0098552 GO:0098656 GO:0099402 GO:1901700 GO:1903825 GO:1905039 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

688

Amino Acids

76.3

Weight (kDa)

8.76

Isoelectric Point (pI)

42.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	76 - 226	1.9e-24	ABC transporter
AAA_29	PF13555	87 - 111	2.4e-06	P-loop containing region of AAA domain
ABC2_membrane_7	PF19055	255 - 310	1e-08	ABC-2 type transporter
ABC2_membrane	PF01061	370 - 579	6e-39	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010921)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17840
fragaria_vesca	FvH4_6g06950 FvH4_6g06950
malus_domestica	MD04G1197400.v1.1 MD12G1210200.v1.1
prunus_persica	Prupe.6G317800_v2.0.a1 Prupe.6G317800_v2.0.a1
pyrus_communis	pycom04g17460 pycom12g19760
rosa_chinensis	RchiOBHm_Chr3g0456491
rosa_laevigata	RLG00000025301
rosa_multiflora	Rmu_sc0002607.1_g000010 Rmu_ssc0000446.1_g000010
rosa_roxburghii	Rroxscaffold_6G00422710
rosa_rugosa	Rorug03G0013400
rosa_samantha	Rh3AG073800 Rh3CG075200 Rh3DG077000
rosa_wichuraiana	Rw0G012260 Rw3G006330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	677
AciI	CCGC	1 cut(s)	1311
AclWI	GGATC	3 cut(s)	599, 1782, 1895
AcoI	YGGCCR	1 cut(s)	1743
AcsI	RAATTY	1 cut(s)	1608
AcuI	CTGAAG	1 cut(s)	678
AdeI	CACNNNGTG	1 cut(s)	722
AfaI	GTAC	1 cut(s)	806
AfiI	CCNNNNNNNGG	2 cut(s)	677, 1711
AflII	CTTAAG	1 cut(s)	1642
AflIII	ACRYGT	1 cut(s)	1143
AgsI	TTSAA	3 cut(s)	759, 788, 1363
AjiI	CACGTC	1 cut(s)	168
AjnI	CCWGG	3 cut(s)	250, 1480, 1789
AleI	CACNNNNGTG	1 cut(s)	1374
AluBI	AGCT	8 cut(s)	258, 266, 382, 755, 875, 1028, 1545, 1701
AluI	AGCT	8 cut(s)	258, 266, 382, 755, 875, 1028, 1545, 1701
Alw21I	GWGCWC	2 cut(s)	514, 727
Alw26I	GTCTC	7 cut(s)	203, 443, 1478, 1636, 1760, 1930, 2015
AlwI	GGATC	3 cut(s)	599, 1782, 1895
AlwNI	CAGNNNCTG	1 cut(s)	251
AoxI	GGCC	6 cut(s)	274, 644, 843, 954, 1602, 1743
ApaI	GGGCCC	1 cut(s)	278
ApeKI	GCWGC	6 cut(s)	23, 54, 369, 398, 478, 1025
ApoI	RAATTY	1 cut(s)	1608
Asp700I	GAANNNNTTC	1 cut(s)	1343
AspLEI	GCGC	1 cut(s)	557
AspS9I	GGNCC	5 cut(s)	274, 275, 969, 1602, 2034
AsuHPI	GGTGA	6 cut(s)	196, 202, 218, 755, 1805, 1920
AvaII	GGWCC	2 cut(s)	969, 2034
BaeGI	GKGCMC	1 cut(s)	278
BanII	GRGCYC	1 cut(s)	278
BauI	CACGAG	1 cut(s)	732
BbsI	GAAGAC	1 cut(s)	1966
Bbv12I	GWGCWC	2 cut(s)	514, 727
BbvCI	CCTCAGC	1 cut(s)	1394
BbvI	GCAGC	6 cut(s)	35, 66, 381, 385, 465, 1037
BceAI	ACGGC	1 cut(s)	306
BciT130I	CCWGG	3 cut(s)	252, 1482, 1791
BclI	TGATCA	3 cut(s)	796, 910, 1905
BcoDI	GTCTC	7 cut(s)	203, 443, 1478, 1636, 1760, 1930, 2015
BfaI	CTAG	7 cut(s)	318, 468, 648, 683, 1095, 1628, 1805
BfmI	CTRYAG	3 cut(s)	545, 1029, 1533
BfrI	CTTAAG	1 cut(s)	1642
BglI	GCCNNNNNGGC	2 cut(s)	851, 1675
BglII	AGATCT	1 cut(s)	633
BisI	GCNGC	6 cut(s)	24, 55, 370, 399, 479, 1026
BlsI	GCNGC	6 cut(s)	25, 56, 371, 400, 480, 1027
Bme1390I	CCNGG	3 cut(s)	252, 1482, 1791
Bme18I	GGWCC	2 cut(s)	969, 2034
BmgBI	CACGTC	1 cut(s)	168
BmgT120I	GGNCC	5 cut(s)	274, 275, 969, 1602, 2034
BmiI	GGNNCC	4 cut(s)	276, 970, 1213, 1603
BmrFI	CCNGG	3 cut(s)	252, 1482, 1791
BmsI	GCATC	2 cut(s)	298, 1280
BpiI	GAAGAC	1 cut(s)	1966
BplI	GAGNNNNNCTC	4 cut(s)	94, 126, 1910, 1942
BpmI	CTGGAG	1 cut(s)	1101
Bpu10I	CCTNAGC	3 cut(s)	1172, 1394, 1665
BsaAI	YACGTR	1 cut(s)	722
BsaBI	GATNNNNATC	2 cut(s)	999, 1826
BsaI	GGTCTC	2 cut(s)	1478, 2015
BsaJI	CCNNGG	2 cut(s)	1852, 1931
BsaWI	WCCGGW	2 cut(s)	1771, 1884
Bsc4I	CCNNNNNNNGG	2 cut(s)	677, 1711
Bse118I	RCCGGY	1 cut(s)	1745
Bse1I	ACTGG	7 cut(s)	241, 519, 675, 1172, 1240, 1670, 2050
Bse3DI	GCAATG	2 cut(s)	621, 1419
Bse8I	GATNNNNATC	2 cut(s)	999, 1826
BseBI	CCWGG	3 cut(s)	252, 1482, 1791
BseDI	CCNNGG	2 cut(s)	1852, 1931
BseGI	GGATG	5 cut(s)	154, 1477, 1659, 1800, 1927
BseJI	GATNNNNATC	2 cut(s)	999, 1826
BseLI	CCNNNNNNNGG	2 cut(s)	677, 1711
BseMI	GCAATG	2 cut(s)	621, 1419
BseMII	CTCAG	7 cut(s)	92, 188, 227, 840, 994, 1186, 1408
BseNI	ACTGG	7 cut(s)	241, 519, 675, 1172, 1240, 1670, 2050
BseRI	GAGGAG	1 cut(s)	1969
BseSI	GKGCMC	1 cut(s)	278
BseXI	GCAGC	6 cut(s)	35, 66, 381, 385, 465, 1037
BseYI	CCCAGC	1 cut(s)	19
BsgI	GTGCAG	1 cut(s)	1933
BshFI	GGCC	6 cut(s)	276, 646, 845, 956, 1604, 1745
BsiHKAI	GWGCWC	2 cut(s)	514, 727
BsiSI	CCGG	6 cut(s)	482, 1605, 1635, 1746, 1772, 1885
BslFI	GGGAC	4 cut(s)	445, 1078, 1166, 2005
BslI	CCNNNNNNNGG	2 cut(s)	677, 1711
BsmAI	GTCTC	7 cut(s)	203, 443, 1478, 1636, 1760, 1930, 2015
BsmBI	CGTCTC	1 cut(s)	443
BsmFI	GGGAC	4 cut(s)	445, 1078, 1166, 2005
BsnI	GGCC	6 cut(s)	276, 646, 845, 956, 1604, 1745
Bso31I	GGTCTC	2 cut(s)	1478, 2015
Bsp120I	GGGCCC	1 cut(s)	274
Bsp1286I	GDGCHC	3 cut(s)	278, 514, 727
Bsp143I	GATC	9 cut(s)	175, 591, 633, 796, 910, 1774, 1835, 1887, 1905
BspACI	CCGC	1 cut(s)	1311
BspANI	GGCC	6 cut(s)	276, 646, 845, 956, 1604, 1745
BspCNI	CTCAG	7 cut(s)	93, 189, 226, 841, 993, 1185, 1407
BspHI	TCATGA	1 cut(s)	1902
BspLI	GGNNCC	4 cut(s)	276, 970, 1213, 1603
BspMAI	CTGCAG	1 cut(s)	549
BspPI	GGATC	3 cut(s)	599, 1782, 1895
BspTI	CTTAAG	1 cut(s)	1642
BspTNI	GGTCTC	2 cut(s)	1478, 2015
BsrDI	GCAATG	2 cut(s)	621, 1419
BsrFI	RCCGGY	1 cut(s)	1745
BsrI	ACTGG	7 cut(s)	241, 519, 675, 1172, 1240, 1670, 2050
BssAI	RCCGGY	1 cut(s)	1745
BssECI	CCNNGG	2 cut(s)	1852, 1931
BssMI	GATC	9 cut(s)	175, 591, 633, 796, 910, 1774, 1835, 1887, 1905
BssSI	CACGAG	1 cut(s)	732
BssT1I	CCWWGG	2 cut(s)	1852, 1931
Bst2BI	CACGAG	1 cut(s)	732
Bst2UI	CCWGG	3 cut(s)	252, 1482, 1791
Bst6I	CTCTTC	2 cut(s)	5, 602
BstAFI	CTTAAG	1 cut(s)	1642
BstAPI	GCANNNNNTGC	1 cut(s)	32
BstBAI	YACGTR	1 cut(s)	722
BstC8I	GCNNGC	5 cut(s)	59, 510, 1564, 1747, 1981
BstF5I	GGATG	5 cut(s)	154, 1477, 1659, 1800, 1927
BstHHI	GCGC	1 cut(s)	557
BstKTI	GATC	9 cut(s)	178, 594, 636, 799, 913, 1777, 1838, 1890, 1908
BstMAI	GTCTC	7 cut(s)	203, 443, 1478, 1636, 1760, 1930, 2015
BstMBI	GATC	9 cut(s)	175, 591, 633, 796, 910, 1774, 1835, 1887, 1905
BstMWI	GCNNNNNNNGC	5 cut(s)	32, 335, 652, 851, 1675
BstNI	CCWGG	3 cut(s)	252, 1482, 1791
BstNSI	RCATGY	3 cut(s)	1147, 1527, 1979
BstSCI	CCNGG	3 cut(s)	250, 1480, 1789
BstSFI	CTRYAG	3 cut(s)	545, 1029, 1533
BstSLI	GKGCMC	1 cut(s)	278
BstV1I	GCAGC	6 cut(s)	35, 66, 381, 385, 465, 1037
BstV2I	GAAGAC	1 cut(s)	1966
BstX2I	RGATCY	1 cut(s)	633
BstYI	RGATCY	1 cut(s)	633
BsuRI	GGCC	6 cut(s)	276, 646, 845, 956, 1604, 1745
BtrI	CACGTC	1 cut(s)	168
BtsCI	GGATG	5 cut(s)	154, 1477, 1659, 1800, 1927
BtsI	GCAGTG	4 cut(s)	393, 781, 1380, 1921
Cac8I	GCNNGC	5 cut(s)	59, 510, 1564, 1747, 1981
CaiI	CAGNNNCTG	1 cut(s)	251
CciI	TCATGA	1 cut(s)	1902
CfoI	GCGC	1 cut(s)	557
Cfr10I	RCCGGY	1 cut(s)	1745
Cfr13I	GGNCC	5 cut(s)	274, 275, 969, 1602, 2034
CsiI	ACCWGGT	1 cut(s)	1789
Csp6I	GTAC	1 cut(s)	805
CviQI	GTAC	1 cut(s)	805
DpnI	GATC	9 cut(s)	177, 593, 635, 798, 912, 1776, 1837, 1889, 1907
DpnII	GATC	9 cut(s)	175, 591, 633, 796, 910, 1774, 1835, 1887, 1905
DraIII	CACNNNGTG	1 cut(s)	722
EaeI	YGGCCR	1 cut(s)	1743
Eam1104I	CTCTTC	2 cut(s)	5, 602
EarI	CTCTTC	2 cut(s)	5, 602
Eco130I	CCWWGG	2 cut(s)	1852, 1931
Eco147I	AGGCCT	2 cut(s)	646, 845
Eco24I	GRGCYC	1 cut(s)	278
Eco31I	GGTCTC	2 cut(s)	1478, 2015
Eco32I	GATATC	2 cut(s)	456, 1050
Eco47I	GGWCC	2 cut(s)	969, 2034
Eco57I	CTGAAG	1 cut(s)	678
EcoO109I	RGGNCCY	2 cut(s)	275, 2034
EcoRI	GAATTC	1 cut(s)	1608
EcoRII	CCWGG	3 cut(s)	250, 1480, 1789
EcoRV	GATATC	2 cut(s)	456, 1050
EcoT14I	CCWWGG	2 cut(s)	1852, 1931
EcoT22I	ATGCAT	1 cut(s)	1525
EcoT38I	GRGCYC	1 cut(s)	278
ErhI	CCWWGG	2 cut(s)	1852, 1931
Esp3I	CGTCTC	1 cut(s)	443
FaqI	GGGAC	4 cut(s)	445, 1078, 1166, 2005
FauI	CCCGC	1 cut(s)	1304
FauNDI	CATATG	2 cut(s)	403, 856
FbaI	TGATCA	3 cut(s)	796, 910, 1905
Fnu4HI	GCNGC	6 cut(s)	24, 55, 370, 399, 479, 1026
FokI	GGATG	5 cut(s)	161, 1464, 1646, 1787, 1934
FriOI	GRGCYC	1 cut(s)	278
Fsp4HI	GCNGC	6 cut(s)	24, 55, 370, 399, 479, 1026
FspBI	CTAG	7 cut(s)	318, 468, 648, 683, 1095, 1628, 1805
GlaI	GCGC	1 cut(s)	556
GluI	GCNGC	6 cut(s)	24, 55, 370, 399, 479, 1026
GsaI	CCCAGC	1 cut(s)	23
GsuI	CTGGAG	1 cut(s)	1101
HaeIII	GGCC	6 cut(s)	276, 646, 845, 956, 1604, 1745
HapII	CCGG	6 cut(s)	482, 1605, 1635, 1746, 1772, 1885
HhaI	GCGC	1 cut(s)	557
Hin6I	GCGC	1 cut(s)	555
HinP1I	GCGC	1 cut(s)	555
HincII	GTYRAC	2 cut(s)	1141, 2058
HindII	GTYRAC	2 cut(s)	1141, 2058
HindIII	AAGCTT	1 cut(s)	256
HinfI	GANTC	9 cut(s)	193, 211, 433, 901, 985, 995, 1076, 1249, 1936
HpaII	CCGG	6 cut(s)	482, 1605, 1635, 1746, 1772, 1885
HphI	GGTGA	6 cut(s)	196, 202, 218, 755, 1805, 1920
Hpy166II	GTNNAC	5 cut(s)	680, 832, 931, 1141, 2058
Hpy188III	TCNNGA	8 cut(s)	66, 637, 662, 982, 1080, 1423, 1819, 1903
Hpy8I	GTNNAC	5 cut(s)	680, 832, 931, 1141, 2058
HpyAV	CCTTC	9 cut(s)	118, 288, 349, 606, 735, 1123, 1329, 1333, 2034
HpyCH4IV	ACGT	2 cut(s)	167, 721
HpyF10VI	GCNNNNNNNGC	5 cut(s)	32, 335, 652, 851, 1675
HpySE526I	ACGT	2 cut(s)	167, 721
HspAI	GCGC	1 cut(s)	555
KroI	GCCGGC	1 cut(s)	1745
KroNI	GCCGGC	1 cut(s)	1747
Ksp22I	TGATCA	3 cut(s)	796, 910, 1905
Kzo9I	GATC	9 cut(s)	175, 591, 633, 796, 910, 1774, 1835, 1887, 1905
Lsp1109I	GCAGC	6 cut(s)	35, 66, 381, 385, 465, 1037
LweI	GCATC	2 cut(s)	298, 1280
MabI	ACCWGGT	1 cut(s)	1789
MaeI	CTAG	7 cut(s)	318, 468, 648, 683, 1095, 1628, 1805
MaeII	ACGT	2 cut(s)	167, 721
MalI	GATC	9 cut(s)	177, 593, 635, 798, 912, 1776, 1837, 1889, 1907
MboI	GATC	9 cut(s)	175, 591, 633, 796, 910, 1774, 1835, 1887, 1905
MboII	GAAGA	4 cut(s)	22, 619, 1492, 1971
MfeI	CAATTG	1 cut(s)	1305
MflI	RGATCY	1 cut(s)	633
MhlI	GDGCHC	3 cut(s)	278, 514, 727
MluCI	AATT	6 cut(s)	421, 574, 759, 1305, 1608, 1779
MlyI	GAGTC	5 cut(s)	187, 205, 427, 994, 1070
MmeI	TCCRAC	2 cut(s)	480, 1426
Mph1103I	ATGCAT	1 cut(s)	1525
MroNI	GCCGGC	1 cut(s)	1745
MroXI	GAANNNNTTC	1 cut(s)	1343
MseI	TTAA	5 cut(s)	233, 1059, 1643, 1751, 1782
MslI	CAYNNNNRTG	6 cut(s)	536, 585, 626, 1298, 1374, 1622
MspCI	CTTAAG	1 cut(s)	1642
MspI	CCGG	6 cut(s)	482, 1605, 1635, 1746, 1772, 1885
MspR9I	CCNGG	3 cut(s)	252, 1482, 1791
MunI	CAATTG	1 cut(s)	1305
MvaI	CCWGG	3 cut(s)	252, 1482, 1791
MwoI	GCNNNNNNNGC	5 cut(s)	32, 335, 652, 851, 1675
NaeI	GCCGGC	1 cut(s)	1747
NdeI	CATATG	2 cut(s)	403, 856
NdeII	GATC	9 cut(s)	175, 591, 633, 796, 910, 1774, 1835, 1887, 1905
NgoMIV	GCCGGC	1 cut(s)	1745
NlaIV	GGNNCC	4 cut(s)	276, 970, 1213, 1603
NmeAIII	GCCGAG	1 cut(s)	443
NmuCI	GTSAC	7 cut(s)	190, 406, 1291, 1367, 1378, 1528, 1793
NsiI	ATGCAT	1 cut(s)	1525
NspI	RCATGY	3 cut(s)	1147, 1527, 1979
OliI	CACNNNNGTG	1 cut(s)	1374
PagI	TCATGA	1 cut(s)	1902
PceI	AGGCCT	2 cut(s)	646, 845
PciI	ACATGT	1 cut(s)	1143
PdiI	GCCGGC	1 cut(s)	1747
PdmI	GAANNNNTTC	1 cut(s)	1343
PfeI	GAWTC	4 cut(s)	901, 995, 1249, 1936
PflFI	GACNNNGTC	1 cut(s)	93
PflMI	CCANNNNNTGG	1 cut(s)	677
PkrI	GCNGC	6 cut(s)	25, 56, 371, 400, 480, 1027
PleI	GAGTC	5 cut(s)	187, 205, 427, 993, 1070
PpsI	GAGTC	5 cut(s)	187, 205, 427, 993, 1070
Ppu21I	YACGTR	1 cut(s)	722
PpuMI	RGGWCCY	1 cut(s)	2034
PscI	ACATGT	1 cut(s)	1143
Psp5II	RGGWCCY	1 cut(s)	2034
Psp6I	CCWGG	3 cut(s)	250, 1480, 1789
PspFI	CCCAGC	1 cut(s)	19
PspGI	CCWGG	3 cut(s)	250, 1480, 1789
PspN4I	GGNNCC	4 cut(s)	276, 970, 1213, 1603
PspOMI	GGGCCC	1 cut(s)	274
PspPI	GGNCC	5 cut(s)	274, 275, 969, 1602, 2034
PspPPI	RGGWCCY	1 cut(s)	2034
PstI	CTGCAG	1 cut(s)	549
PstNI	CAGNNNCTG	1 cut(s)	251
PsuI	RGATCY	1 cut(s)	633
PsyI	GACNNNGTC	1 cut(s)	93
RsaI	GTAC	1 cut(s)	806
RsaNI	GTAC	1 cut(s)	805
RseI	CAYNNNNRTG	6 cut(s)	536, 585, 626, 1298, 1374, 1622
SaqAI	TTAA	5 cut(s)	233, 1059, 1643, 1751, 1782
SatI	GCNGC	6 cut(s)	24, 55, 370, 399, 479, 1026
Sau3AI	GATC	9 cut(s)	175, 591, 633, 796, 910, 1774, 1835, 1887, 1905
Sau96I	GGNCC	5 cut(s)	274, 275, 969, 1602, 2034
SchI	GAGTC	5 cut(s)	187, 205, 427, 994, 1070
ScrFI	CCNGG	3 cut(s)	252, 1482, 1791
SduI	GDGCHC	3 cut(s)	278, 514, 727
SexAI	ACCWGGT	1 cut(s)	1789
SfaNI	GCATC	2 cut(s)	298, 1280
SfcI	CTRYAG	3 cut(s)	545, 1029, 1533
SinI	GGWCC	2 cut(s)	969, 2034
SmiMI	CAYNNNNRTG	6 cut(s)	536, 585, 626, 1298, 1374, 1622
SmlI	CTYRAG	1 cut(s)	1642
SmoI	CTYRAG	1 cut(s)	1642
Sse9I	AATT	6 cut(s)	421, 574, 759, 1305, 1608, 1779
SseBI	AGGCCT	2 cut(s)	646, 845
SsiI	CCGC	1 cut(s)	1311
SspI	AATATT	2 cut(s)	1228, 1996
SspMI	CTAG	7 cut(s)	318, 468, 648, 683, 1095, 1628, 1805
StuI	AGGCCT	2 cut(s)	646, 845
StyD4I	CCNGG	3 cut(s)	250, 1480, 1789
StyI	CCWWGG	2 cut(s)	1852, 1931
TaiI	ACGT	2 cut(s)	170, 724
TaqI	TCGA	2 cut(s)	1247, 1488
TaqII	GACCGA	1 cut(s)	1460
TasI	AATT	6 cut(s)	421, 574, 759, 1305, 1608, 1779
TatI	WGTACW	1 cut(s)	804
TfiI	GAWTC	4 cut(s)	901, 995, 1249, 1936
Tru1I	TTAA	5 cut(s)	233, 1059, 1643, 1751, 1782
Tru9I	TTAA	5 cut(s)	233, 1059, 1643, 1751, 1782
TseFI	GTSAC	7 cut(s)	190, 406, 1291, 1367, 1378, 1528, 1793
TseI	GCWGC	6 cut(s)	23, 54, 369, 398, 478, 1025
Tsp45I	GTSAC	7 cut(s)	190, 406, 1291, 1367, 1378, 1528, 1793
TspDTI	ATGAA	9 cut(s)	989, 1122, 1254, 1288, 1311, 1352, 1453, 1612, 1888
TspGWI	ACGGA	1 cut(s)	20
Tth111I	GACNNNGTC	1 cut(s)	93
Van91I	CCANNNNNTGG	1 cut(s)	677
Vha464I	CTTAAG	1 cut(s)	1642
VpaK11BI	GGWCC	2 cut(s)	969, 2034
XapI	RAATTY	1 cut(s)	1608
XceI	RCATGY	3 cut(s)	1147, 1527, 1979
XmnI	GAANNNNTTC	1 cut(s)	1343
XspI	CTAG	7 cut(s)	318, 468, 648, 683, 1095, 1628, 1805
Zsp2I	ATGCAT	1 cut(s)	1525

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.