Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0010921

Physical Location & Seq

Genomic Coordinates Forward (+)

43520774 .. 43524442

Gene Structure 3669 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00422710.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2163 bp

ATGGCGGAGAAGAGAAACCCAGCAGCAGAAAATGCTATGATGGAGATAGAGAGCAGCAAGCCCTCTGGAAATGGGATTGTGGCTAGTGGACTTAGTCCTCTGAGTGAGACTCTATGGAGGGAGAAGGCCAGTGTGGAAATTGTAGGGGATGTGTCGGCGAGGCTGACGTGGAAGGATCTGACGGTGATGGTGACTCTGAGCAACGGTGAGACTCAGAAGGTTTTGGAGGGTTTAACTGGTTATGCAGAACCTGGAAGCTTCACAGCTTTGATGGGCCCTTCTGGTTCCGGCAAATCAACCTTGCTTGATGCTCTCTCTAGCCGTTTGGCTTCCAATGCCTTCCTTTCTGGCTCTGTTTTACTCAATGGCCGCAAAAGAAAGCTCTCTTTCGGCACTGCTGCATATGTGACCCAAGATGACAATTTGATTGGGACTCTGACTGTAAGAGAGACGATATCGTACTCGGCTAGATTGAGGCTGCCGGATAAGATGGGGAGGTCGGAGAAGCGAGCACTGGTGGAGAGGACAATCATAGAAATGGGTCTGCAGGATTGCGCCGATACAGTTATTGGGAATTGGCATTTGCGTGGGATCAGTGGGGGAGAGAAGAGAAGGGTCAGCATTGCTGTGGAGATCTTGATGAGGCCTAGATTGCTCTTTCTTGATGAGCCAACCAGTGGACTAGATAGGGTGAGTCTGCTAGTGACCATTTGGGCTTTAATTCATCGCAGTGCTTCAGCATTTTTTGTAACACAGACACTACGTGCTCTATCACGAGATGGAAGGACTGTGATAGCTTCAATTCACCAGCCAAGCAGTGAAGTCTTTGAACTATTTGATCAACTGTACTTGCTTTCTGGTGGCAAAACAGTTTACTTTGGTCAGGCCTCTGAGGCATATGAGTTCTTTTCACAAGCTGGTTTTCCTTGCCCTGCTTTGAGGAATCCATCTGATCATTTTCTTAGATGTGTAAACTCTGACTTTGATAAAGTAAAGGCCACACTGAAAGGGTCCATGAAACTCAGGTTTGAAGCAAGTGATGATCCTGTGGAGAAGATTTCCACCGCTGAAGCTATAAGAGTCCTTGTTGATTCGTATCGTAGTTCGCAATACTCTTATGCAGCTACAGAAAAAGTTGCAGAGATATCCAAAGTTAAAGGGACTGTTTTAGACTCTGGAGGAAGTCAGGCTAGTTTCCTAAGGCAGACGTTCACATTGACAAAGCGTTCATTTGTCAACATGTCAAGGGACTTTGGCTATTACTGGCTCAGGCTTGTCATTTACATTGTTGTTGTAGTTTGTATCGGAACCATCTATCTGAATATTGGAACTGGTTACGCTTCGATTCTGGCAAGGGGTTCATGTGCATCTTTTGTTTTTGGTTTTGTCACTTTCATGTCAATTGGCGGGTTTCCTTCATTTGTAGAAGATATGAAGGTTTTCCAAAGAGAGAGGTTGAATGGTCACTATGGTGTCACTGCTTTTGTCCTCAGCAACACATTCTCTGCAATGCCATTCCTGATACTGATTACCTTTCTGGCTGGAACTATCTGTTACTTCATGGTCGGTCTCCATCCAGGCTTCGAGCATTACTTCTTCTTTGTGGTGTGCCTCTATGCATGTGTCACTGTAGTTGAGAGCTTGATGATGGCGATAGCCAGCGTTATTCCTAACTTCCTCATGGGTATCATCATAGGGGCCGGAATTCAGGGCATATTCATGCTAGTCTCCGGCTACTTCAGGCTACCAAATGACATCCCTAAGCCAGTCTGGCGTTACCCGATGTCATACATCAGCTTCCACTTCTGGGCTCTACAGGGTCAATATCAGAATGACTTGGCCGGCTTAATGTTTGACAACGAGACACCGGATCAAAGTAAGATACCAGGTGACTACATCCTAGTAAATGTGTTCCAGATTGACATCAGCAGATCAAAATGGATAGACCTTGGTGTTATATTCAGCATGATTGTTGCCTACCGGATCATCTTTTTCATTATGATCAAGTACAGTGAGGATGTCTCACCTTGGATTCGAGGTTATATGGCGAGGAGAAGACTGAAACAGAAAAATGCCATCCAAAACACAAATATTGCCCCTGATGGTCTCACACAGTCCCCTTCTTTGAGGACCTATGCAACTGGTAAAAGGTTGACGAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005319 GO:0005342 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006950 GO:0006970 GO:0007275 GO:0007389 GO:0008028 GO:0008150 GO:0008509 GO:0008514 GO:0009611 GO:0009628 GO:0009651 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0009897 GO:0009965 GO:0009986 GO:0010016 GO:0010033 GO:0010051 GO:0010154 GO:0010222 GO:0010588 GO:0010876 GO:0015075 GO:0015245 GO:0015318 GO:0015399 GO:0015405 GO:0015711 GO:0015718 GO:0015849 GO:0015908 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0022804 GO:0022857 GO:0031224 GO:0032501 GO:0032502 GO:0033036 GO:0033993 GO:0034220 GO:0042221 GO:0042623 GO:0042626 GO:0042802 GO:0042803 GO:0043492 GO:0044425 GO:0044459 GO:0044464 GO:0046942 GO:0046943 GO:0046983 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071702 GO:0071944 GO:0080051 GO:0090698 GO:0097305 GO:0098552 GO:0098656 GO:0099402 GO:1901700 GO:1903825 GO:1905039 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

720

Amino Acids

80.0

Weight (kDa)

9.11

Isoelectric Point (pI)

40.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	76 - 226	1.3e-24	ABC transporter
AAA_29	PF13555	87 - 111	2.5e-06	P-loop containing region of AAA domain
ABC2_membrane_7	PF19055	269 - 324	1.1e-08	ABC-2 type transporter
ABC2_membrane	PF01061	401 - 611	5.5e-40	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010921)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17840
fragaria_vesca	FvH4_6g06950 FvH4_6g06950
malus_domestica	MD04G1197400.v1.1 MD12G1210200.v1.1
prunus_persica	Prupe.6G317800_v2.0.a1 Prupe.6G317800_v2.0.a1
pyrus_communis	pycom04g17460 pycom12g19760
rosa_chinensis	RchiOBHm_Chr3g0456491
rosa_laevigata	RLG00000025301
rosa_multiflora	Rmu_sc0002607.1_g000010 Rmu_ssc0000446.1_g000010
rosa_roxburghii	Rroxscaffold_6G00422710
rosa_rugosa	Rorug03G0013400
rosa_samantha	Rh3AG073800 Rh3CG075200 Rh3DG077000
rosa_wichuraiana	Rw0G012260 Rw3G006330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	677
AciI	CCGC	4 cut(s)	5, 370, 1065, 1407
AclWI	GGATC	5 cut(s)	183, 599, 1037, 1878, 1991
AcoI	YGGCCR	2 cut(s)	367, 1839
AcsI	RAATTY	1 cut(s)	1704
AcuI	CTGAAG	3 cut(s)	720, 1089, 1723
AdeI	CACNNNGTG	1 cut(s)	764
AfaI	GTAC	3 cut(s)	461, 848, 2009
AfiI	CCNNNNNNNGG	2 cut(s)	677, 1807
AflIII	ACRYGT	1 cut(s)	1239
AgsI	TTSAA	4 cut(s)	801, 830, 1031, 1459
AjiI	CACGTC	1 cut(s)	168
AjnI	CCWGG	3 cut(s)	250, 1576, 1885
AleI	CACNNNNGTG	1 cut(s)	1470
AluBI	AGCT	9 cut(s)	258, 266, 382, 797, 917, 1073, 1124, 1641, 1797
AluI	AGCT	9 cut(s)	258, 266, 382, 797, 917, 1073, 1124, 1641, 1797
Alw21I	GWGCWC	2 cut(s)	514, 769
Alw26I	GTCTC	8 cut(s)	101, 203, 443, 1574, 1732, 1856, 2026, 2111
AlwI	GGATC	5 cut(s)	183, 599, 1037, 1878, 1991
AlwNI	CAGNNNCTG	1 cut(s)	251
AoxI	GGCC	8 cut(s)	126, 274, 367, 644, 885, 996, 1698, 1839
ApaI	GGGCCC	1 cut(s)	278
ApeKI	GCWGC	5 cut(s)	23, 54, 398, 478, 1121
ApoI	RAATTY	1 cut(s)	1704
Asp700I	GAANNNNTTC	1 cut(s)	1439
AspLEI	GCGC	1 cut(s)	557
AspS9I	GGNCC	5 cut(s)	274, 275, 1011, 1698, 2130
AsuHPI	GGTGA	7 cut(s)	196, 202, 218, 703, 797, 1901, 2016
AvaII	GGWCC	2 cut(s)	1011, 2130
AxyI	CCTNAGG	1 cut(s)	1199
BaeGI	GKGCMC	1 cut(s)	278
BanII	GRGCYC	2 cut(s)	278, 1813
BauI	CACGAG	1 cut(s)	774
BbsI	GAAGAC	1 cut(s)	2062
Bbv12I	GWGCWC	2 cut(s)	514, 769
BbvCI	CCTCAGC	1 cut(s)	1490
BbvI	GCAGC	5 cut(s)	35, 66, 385, 465, 1133
BceAI	ACGGC	1 cut(s)	306
BciT130I	CCWGG	3 cut(s)	252, 1578, 1887
BclI	TGATCA	3 cut(s)	838, 952, 2001
BcoDI	GTCTC	8 cut(s)	101, 203, 443, 1574, 1732, 1856, 2026, 2111
BfaI	CTAG	9 cut(s)	84, 318, 468, 648, 683, 701, 1191, 1724, 1901
BfmI	CTRYAG	4 cut(s)	545, 1125, 1629, 1814
BglI	GCCNNNNNGGC	2 cut(s)	893, 1771
BglII	AGATCT	1 cut(s)	633
BisI	GCNGC	6 cut(s)	24, 55, 370, 399, 479, 1122
BlsI	GCNGC	6 cut(s)	25, 56, 371, 400, 480, 1123
Bme1390I	CCNGG	3 cut(s)	252, 1578, 1887
Bme18I	GGWCC	2 cut(s)	1011, 2130
BmgBI	CACGTC	1 cut(s)	168
BmgT120I	GGNCC	5 cut(s)	274, 275, 1011, 1698, 2130
BmiI	GGNNCC	5 cut(s)	276, 286, 1012, 1309, 1699
BmrFI	CCNGG	3 cut(s)	252, 1578, 1887
BmsI	GCATC	2 cut(s)	298, 1376
BpiI	GAAGAC	1 cut(s)	2062
BplI	GAGNNNNNCTC	4 cut(s)	94, 126, 2006, 2038
BpmI	CTGGAG	1 cut(s)	1197
Bpu10I	CCTNAGC	3 cut(s)	1268, 1490, 1761
BsaAI	YACGTR	1 cut(s)	764
BsaBI	GATNNNNATC	2 cut(s)	1095, 1922
BsaI	GGTCTC	2 cut(s)	1574, 2111
BsaJI	CCNNGG	2 cut(s)	1948, 2027
BsaWI	WCCGGW	2 cut(s)	1867, 1980
Bsc4I	CCNNNNNNNGG	2 cut(s)	677, 1807
Bse118I	RCCGGY	1 cut(s)	1841
Bse1I	ACTGG	8 cut(s)	129, 241, 519, 675, 1268, 1336, 1766, 2146
Bse21I	CCTNAGG	1 cut(s)	1199
Bse3DI	GCAATG	2 cut(s)	621, 1515
Bse8I	GATNNNNATC	2 cut(s)	1095, 1922
BseBI	CCWGG	3 cut(s)	252, 1578, 1887
BseDI	CCNNGG	2 cut(s)	1948, 2027
BseGI	GGATG	6 cut(s)	154, 1573, 1755, 1896, 2023, 2076
BseJI	GATNNNNATC	2 cut(s)	1095, 1922
BseLI	CCNNNNNNNGG	2 cut(s)	677, 1807
BseMI	GCAATG	2 cut(s)	621, 1515
BseMII	CTCAG	7 cut(s)	92, 188, 227, 882, 1036, 1282, 1504
BseNI	ACTGG	8 cut(s)	129, 241, 519, 675, 1268, 1336, 1766, 2146
BseRI	GAGGAG	1 cut(s)	2065
BseSI	GKGCMC	1 cut(s)	278
BseXI	GCAGC	5 cut(s)	35, 66, 385, 465, 1133
BseYI	CCCAGC	1 cut(s)	19
BshFI	GGCC	8 cut(s)	128, 276, 369, 646, 887, 998, 1700, 1841
BsiHKAI	GWGCWC	2 cut(s)	514, 769
BsiSI	CCGG	7 cut(s)	288, 482, 1701, 1731, 1842, 1868, 1981
BslFI	GGGAC	4 cut(s)	445, 1174, 1262, 2101
BslI	CCNNNNNNNGG	2 cut(s)	677, 1807
BsmAI	GTCTC	8 cut(s)	101, 203, 443, 1574, 1732, 1856, 2026, 2111
BsmBI	CGTCTC	1 cut(s)	443
BsmFI	GGGAC	4 cut(s)	445, 1174, 1262, 2101
BsnI	GGCC	8 cut(s)	128, 276, 369, 646, 887, 998, 1700, 1841
Bso31I	GGTCTC	2 cut(s)	1574, 2111
Bsp120I	GGGCCC	1 cut(s)	274
Bsp1286I	GDGCHC	4 cut(s)	278, 514, 769, 1813
BspACI	CCGC	4 cut(s)	5, 370, 1065, 1407
BspANI	GGCC	8 cut(s)	128, 276, 369, 646, 887, 998, 1700, 1841
BspCNI	CTCAG	7 cut(s)	93, 189, 226, 883, 1035, 1281, 1503
BspLI	GGNNCC	5 cut(s)	276, 286, 1012, 1309, 1699
BspMAI	CTGCAG	1 cut(s)	549
BspPI	GGATC	5 cut(s)	183, 599, 1037, 1878, 1991
BspTNI	GGTCTC	2 cut(s)	1574, 2111
BsrDI	GCAATG	2 cut(s)	621, 1515
BsrFI	RCCGGY	1 cut(s)	1841
BsrI	ACTGG	8 cut(s)	129, 241, 519, 675, 1268, 1336, 1766, 2146
BssAI	RCCGGY	1 cut(s)	1841
BssECI	CCNNGG	2 cut(s)	1948, 2027
BssSI	CACGAG	1 cut(s)	774
BssT1I	CCWWGG	2 cut(s)	1948, 2027
Bst2BI	CACGAG	1 cut(s)	774
Bst2UI	CCWGG	3 cut(s)	252, 1578, 1887
Bst6I	CTCTTC	2 cut(s)	5, 602
BstAPI	GCANNNNNTGC	1 cut(s)	32
BstBAI	YACGTR	1 cut(s)	764
BstC8I	GCNNGC	4 cut(s)	59, 510, 1660, 1843
BstF5I	GGATG	6 cut(s)	154, 1573, 1755, 1896, 2023, 2076
BstHHI	GCGC	1 cut(s)	557
BstMAI	GTCTC	8 cut(s)	101, 203, 443, 1574, 1732, 1856, 2026, 2111
BstMWI	GCNNNNNNNGC	5 cut(s)	32, 335, 652, 893, 1771
BstNI	CCWGG	3 cut(s)	252, 1578, 1887
BstNSI	RCATGY	2 cut(s)	1243, 1623
BstSCI	CCNGG	3 cut(s)	250, 1576, 1885
BstSFI	CTRYAG	4 cut(s)	545, 1125, 1629, 1814
BstSLI	GKGCMC	1 cut(s)	278
BstV1I	GCAGC	5 cut(s)	35, 66, 385, 465, 1133
BstV2I	GAAGAC	1 cut(s)	2062
BstX2I	RGATCY	2 cut(s)	175, 633
BstYI	RGATCY	2 cut(s)	175, 633
Bsu36I	CCTNAGG	1 cut(s)	1199
BsuRI	GGCC	8 cut(s)	128, 276, 369, 646, 887, 998, 1700, 1841
BtgZI	GCGATG	1 cut(s)	710
BtrI	CACGTC	1 cut(s)	168
BtsCI	GGATG	6 cut(s)	154, 1573, 1755, 1896, 2023, 2076
BtsI	GCAGTG	4 cut(s)	393, 736, 823, 1476
Cac8I	GCNNGC	4 cut(s)	59, 510, 1660, 1843
CaiI	CAGNNNCTG	1 cut(s)	251
CfoI	GCGC	1 cut(s)	557
Cfr10I	RCCGGY	1 cut(s)	1841
Cfr13I	GGNCC	5 cut(s)	274, 275, 1011, 1698, 2130
CsiI	ACCWGGT	1 cut(s)	1885
Csp6I	GTAC	3 cut(s)	460, 847, 2008
CviAII	CATG	9 cut(s)	1015, 1240, 1362, 1396, 1561, 1620, 1681, 1720, 1966
CviQI	GTAC	3 cut(s)	460, 847, 2008
DraIII	CACNNNGTG	1 cut(s)	764
EaeI	YGGCCR	2 cut(s)	367, 1839
Eam1104I	CTCTTC	2 cut(s)	5, 602
EarI	CTCTTC	2 cut(s)	5, 602
EciI	GGCGGA	1 cut(s)	20
Eco130I	CCWWGG	2 cut(s)	1948, 2027
Eco147I	AGGCCT	2 cut(s)	646, 887
Eco24I	GRGCYC	2 cut(s)	278, 1813
Eco31I	GGTCTC	2 cut(s)	1574, 2111
Eco32I	GATATC	2 cut(s)	456, 1146
Eco47I	GGWCC	2 cut(s)	1011, 2130
Eco57I	CTGAAG	3 cut(s)	720, 1089, 1723
Eco81I	CCTNAGG	1 cut(s)	1199
EcoO109I	RGGNCCY	2 cut(s)	275, 2130
EcoRI	GAATTC	1 cut(s)	1704
EcoRII	CCWGG	3 cut(s)	250, 1576, 1885
EcoRV	GATATC	2 cut(s)	456, 1146
EcoT14I	CCWWGG	2 cut(s)	1948, 2027
EcoT22I	ATGCAT	1 cut(s)	1621
EcoT38I	GRGCYC	2 cut(s)	278, 1813
ErhI	CCWWGG	2 cut(s)	1948, 2027
Esp3I	CGTCTC	1 cut(s)	443
FaeI	CATG	9 cut(s)	1018, 1243, 1365, 1399, 1564, 1623, 1684, 1723, 1969
FaqI	GGGAC	4 cut(s)	445, 1174, 1262, 2101
FatI	CATG	9 cut(s)	1014, 1239, 1361, 1395, 1560, 1619, 1680, 1719, 1965
FauI	CCCGC	1 cut(s)	1400
FauNDI	CATATG	2 cut(s)	403, 898
FbaI	TGATCA	3 cut(s)	838, 952, 2001
Fnu4HI	GCNGC	6 cut(s)	24, 55, 370, 399, 479, 1122
FokI	GGATG	6 cut(s)	161, 1560, 1742, 1883, 2030, 2063
FriOI	GRGCYC	2 cut(s)	278, 1813
Fsp4HI	GCNGC	6 cut(s)	24, 55, 370, 399, 479, 1122
FspBI	CTAG	9 cut(s)	84, 318, 468, 648, 683, 701, 1191, 1724, 1901
GlaI	GCGC	1 cut(s)	556
GluI	GCNGC	6 cut(s)	24, 55, 370, 399, 479, 1122
GsaI	CCCAGC	1 cut(s)	23
GsuI	CTGGAG	1 cut(s)	1197
HaeIII	GGCC	8 cut(s)	128, 276, 369, 646, 887, 998, 1700, 1841
HapII	CCGG	7 cut(s)	288, 482, 1701, 1731, 1842, 1868, 1981
HhaI	GCGC	1 cut(s)	557
Hin1II	CATG	9 cut(s)	1018, 1243, 1365, 1399, 1564, 1623, 1684, 1723, 1969
Hin6I	GCGC	1 cut(s)	555
HinP1I	GCGC	1 cut(s)	555
HincII	GTYRAC	2 cut(s)	1237, 2154
HindII	GTYRAC	2 cut(s)	1237, 2154
HindIII	AAGCTT	1 cut(s)	256
HpaII	CCGG	7 cut(s)	288, 482, 1701, 1731, 1842, 1868, 1981
HphI	GGTGA	7 cut(s)	196, 202, 218, 703, 797, 1901, 2016
Hpy166II	GTNNAC	7 cut(s)	89, 680, 874, 973, 1212, 1237, 2154
Hpy188III	TCNNGA	7 cut(s)	66, 637, 662, 774, 1176, 1519, 1915
Hpy8I	GTNNAC	7 cut(s)	89, 680, 874, 973, 1212, 1237, 2154
HpyCH4IV	ACGT	3 cut(s)	167, 763, 1208
HpyCH4V	TGCA	9 cut(s)	245, 401, 547, 1121, 1139, 1367, 1508, 1619, 2138
HpyF10VI	GCNNNNNNNGC	5 cut(s)	32, 335, 652, 893, 1771
HpySE526I	ACGT	3 cut(s)	167, 763, 1208
Hsp92II	CATG	9 cut(s)	1018, 1243, 1365, 1399, 1564, 1623, 1684, 1723, 1969
HspAI	GCGC	1 cut(s)	555
KroI	GCCGGC	1 cut(s)	1841
KroNI	GCCGGC	1 cut(s)	1843
Ksp22I	TGATCA	3 cut(s)	838, 952, 2001
Lsp1109I	GCAGC	5 cut(s)	35, 66, 385, 465, 1133
LweI	GCATC	2 cut(s)	298, 1376
MabI	ACCWGGT	1 cut(s)	1885
MaeI	CTAG	9 cut(s)	84, 318, 468, 648, 683, 701, 1191, 1724, 1901
MaeII	ACGT	3 cut(s)	167, 763, 1208
MboII	GAAGA	6 cut(s)	22, 619, 1066, 1439, 1588, 2067
MfeI	CAATTG	1 cut(s)	1401
MflI	RGATCY	2 cut(s)	175, 633
MhlI	GDGCHC	4 cut(s)	278, 514, 769, 1813
MluCI	AATT	7 cut(s)	138, 421, 574, 720, 801, 1401, 1704
MlyI	GAGTC	7 cut(s)	103, 187, 205, 427, 703, 1089, 1166
MmeI	TCCRAC	1 cut(s)	480
Mph1103I	ATGCAT	1 cut(s)	1621
MroNI	GCCGGC	1 cut(s)	1841
MroXI	GAANNNNTTC	1 cut(s)	1439
MseI	TTAA	4 cut(s)	233, 719, 1155, 1847
MslI	CAYNNNNRTG	7 cut(s)	536, 585, 626, 729, 1394, 1470, 1718
MspA1I	CMGCKG	1 cut(s)	1067
MspI	CCGG	7 cut(s)	288, 482, 1701, 1731, 1842, 1868, 1981
MspR9I	CCNGG	3 cut(s)	252, 1578, 1887
MunI	CAATTG	1 cut(s)	1401
MvaI	CCWGG	3 cut(s)	252, 1578, 1887
MwoI	GCNNNNNNNGC	5 cut(s)	32, 335, 652, 893, 1771
NaeI	GCCGGC	1 cut(s)	1843
NdeI	CATATG	2 cut(s)	403, 898
NgoMIV	GCCGGC	1 cut(s)	1841
NlaIII	CATG	9 cut(s)	1018, 1243, 1365, 1399, 1564, 1623, 1684, 1723, 1969
NlaIV	GGNNCC	5 cut(s)	276, 286, 1012, 1309, 1699
NmeAIII	GCCGAG	1 cut(s)	443
NmuCI	GTSAC	8 cut(s)	190, 406, 703, 1387, 1463, 1474, 1624, 1889
NsiI	ATGCAT	1 cut(s)	1621
NspI	RCATGY	2 cut(s)	1243, 1623
OliI	CACNNNNGTG	1 cut(s)	1470
PceI	AGGCCT	2 cut(s)	646, 887
PciI	ACATGT	1 cut(s)	1239
PdiI	GCCGGC	1 cut(s)	1843
PdmI	GAANNNNTTC	1 cut(s)	1439
PfeI	GAWTC	4 cut(s)	943, 1091, 1345, 2032
PflFI	GACNNNGTC	1 cut(s)	93
PflMI	CCANNNNNTGG	1 cut(s)	677
PkrI	GCNGC	6 cut(s)	25, 56, 371, 400, 480, 1123
PleI	GAGTC	7 cut(s)	103, 187, 205, 427, 702, 1088, 1166
PpsI	GAGTC	7 cut(s)	103, 187, 205, 427, 702, 1088, 1166
Ppu21I	YACGTR	1 cut(s)	764
PpuMI	RGGWCCY	1 cut(s)	2130
PscI	ACATGT	1 cut(s)	1239
Psp5II	RGGWCCY	1 cut(s)	2130
Psp6I	CCWGG	3 cut(s)	250, 1576, 1885
PspFI	CCCAGC	1 cut(s)	19
PspGI	CCWGG	3 cut(s)	250, 1576, 1885
PspN4I	GGNNCC	5 cut(s)	276, 286, 1012, 1309, 1699
PspOMI	GGGCCC	1 cut(s)	274
PspPI	GGNCC	5 cut(s)	274, 275, 1011, 1698, 2130
PspPPI	RGGWCCY	1 cut(s)	2130
PstI	CTGCAG	1 cut(s)	549
PstNI	CAGNNNCTG	1 cut(s)	251
PsuI	RGATCY	2 cut(s)	175, 633
PsyI	GACNNNGTC	1 cut(s)	93
RsaI	GTAC	3 cut(s)	461, 848, 2009
RsaNI	GTAC	3 cut(s)	460, 847, 2008
RseI	CAYNNNNRTG	7 cut(s)	536, 585, 626, 729, 1394, 1470, 1718
SaqAI	TTAA	4 cut(s)	233, 719, 1155, 1847
SatI	GCNGC	6 cut(s)	24, 55, 370, 399, 479, 1122
Sau96I	GGNCC	5 cut(s)	274, 275, 1011, 1698, 2130
SchI	GAGTC	7 cut(s)	103, 187, 205, 427, 703, 1089, 1166
ScrFI	CCNGG	3 cut(s)	252, 1578, 1887
SduI	GDGCHC	4 cut(s)	278, 514, 769, 1813
SexAI	ACCWGGT	1 cut(s)	1885
SfaNI	GCATC	2 cut(s)	298, 1376
SfcI	CTRYAG	4 cut(s)	545, 1125, 1629, 1814
SinI	GGWCC	2 cut(s)	1011, 2130
SmiMI	CAYNNNNRTG	7 cut(s)	536, 585, 626, 729, 1394, 1470, 1718
Sse9I	AATT	7 cut(s)	138, 421, 574, 720, 801, 1401, 1704
SseBI	AGGCCT	2 cut(s)	646, 887
SsiI	CCGC	4 cut(s)	5, 370, 1065, 1407
SspI	AATATT	2 cut(s)	1324, 2092
SspMI	CTAG	9 cut(s)	84, 318, 468, 648, 683, 701, 1191, 1724, 1901
StuI	AGGCCT	2 cut(s)	646, 887
StyD4I	CCNGG	3 cut(s)	250, 1576, 1885
StyI	CCWWGG	2 cut(s)	1948, 2027
TaiI	ACGT	3 cut(s)	170, 766, 1211
TaqI	TCGA	3 cut(s)	1343, 1584, 2035
TaqII	GACCGA	1 cut(s)	1556
TasI	AATT	7 cut(s)	138, 421, 574, 720, 801, 1401, 1704
TatI	WGTACW	2 cut(s)	846, 2007
TauI	GCSGC	1 cut(s)	372
TfiI	GAWTC	4 cut(s)	943, 1091, 1345, 2032
Tru1I	TTAA	4 cut(s)	233, 719, 1155, 1847
Tru9I	TTAA	4 cut(s)	233, 719, 1155, 1847
TseFI	GTSAC	8 cut(s)	190, 406, 703, 1387, 1463, 1474, 1624, 1889
TseI	GCWGC	5 cut(s)	23, 54, 398, 478, 1121
Tsp45I	GTSAC	8 cut(s)	190, 406, 703, 1387, 1463, 1474, 1624, 1889
Tth111I	GACNNNGTC	1 cut(s)	93
Van91I	CCANNNNNTGG	1 cut(s)	677
VpaK11BI	GGWCC	2 cut(s)	1011, 2130
XapI	RAATTY	1 cut(s)	1704
XceI	RCATGY	2 cut(s)	1243, 1623
XmnI	GAANNNNTTC	1 cut(s)	1439
XspI	CTAG	9 cut(s)	84, 318, 468, 648, 683, 701, 1191, 1724, 1901
Zsp2I	ATGCAT	1 cut(s)	1621

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.