Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0012001

Physical Location & Seq

Genomic Coordinates Forward (+)

5382926 .. 5385109

Gene Structure 2184 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g04560.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2184 bp

ATGCCGGCCCTGGCTAGTTGCGTGGATGCTGCTGTGGCGCCTCCCGGCCACGCTTTCGCCGGGGATAGCTCTCTTCCCGCGTCGCCGTTCTCAGGCTTACCTCCGGCGACCATCACCACCGCAGCCGACAATTCCCATTGGTCCCCTTCCCTATCGTCCGACCTCTACCGAATCGATGCCTGGGGTGGGCCCTACTTCACCGTCAACTCCTCCGGCAACGTCGCCGTCCGTCCTCACGGGACGGCGACTCTGCCGCACCAGGAGATCGATCTGATGAAGATCGTGAAGAAGGTTTCGGATTCAAAACCGGAGTGCGGACTTGGGTTGCAGCTGCCGCTCATTGTTCGCCTCCCTGATGTGCTCAAGGACCGGCTCGAGTCCCTCCAGGGCGCCTTCGATCTGGCGATCCGGTCCCACAACTACGGCTCCCACTACCAGGGCGTGTACCCGGTGAAATGCAACCAGGACCGGTTCGTCGTGGAGGACATTGTCAAGTTCGGGTCCCCGTTCCGGTTCGGACTGGAAGCCGGGTCGAAGCCGGAGCTCCTCTTGGCCATGAGCTGCTTGTGCAAAGGTAATCCCGACGCCCTTCTCATCTGCAATGGATTCAAAGACCTTGAGTACATCTCTCTGGCTCTGTTCGCCCGCAAGCTCGCCTTGAACACTGTGATTGTTCTTGAGCAAGAGGAGGAGCTCGATTTGGTTGTTGATTTGAGCCAAAAGCTCGGCGTACGACCTGTGATTGGCGTCCGGGCCAAGCTCAAGACCAAGCATTCGGGCCATTTCGGTTCAACTTCCGGCGAGAAGGGAAAGTTCGGACTCACCACCACTCAGATTTTACGCGTTGTGAATAAGCTTGATAAGCTGGGTATGCTTGATTGCTTTCAGTTGTTGCATTTTCATATCGGGTCTCAGATCCCTTCGACGGCCCTGCTCGCTGATAGCGTATCCGAGGCGTCGCAGATATACTGTGAATTGGTCCGTCTCGGTGCCCACATGAAGGTCATAGACATTGGAGGCGGTCTGGGTATTGATTACGATGGATCCAAATCTAGTGACTCGGAGATTTCGGTCAGCTACGGCCTTGAAGAGTATGCCTCCGCCGTTGTCCGAACGGTTCGGAACGTATGTGAACGGAGGTCCGTGAAGCACCCGGTGATTTGCAGTGAAAGCGGCCGAGCCTTGGTTTCCCACCACTCGGTTCTCATATTTGAGGCTATTTCTTCCAGTGCTTGTGATGATGCTCCTTCCATGTCCGCCTTTGAGCATCAGTACTTCATTGAGGGTCTGACGGATGAAGCTCGTGCCGATTACCTGAACCTCTCCGCTGCGGCTATCAGAGGTGAGTACGAGGCTTGTTTGACGTATGCTGATCTGTTGAAACAACGGAGTGTTGAACAATTCAAAGAAGGGTCTGTCGGTATTGAGCAATTAGCCACCGTCGATGGGTTCTGTGATACGTTTTCGAAAGCAATCGGGGCATCTGACGCTGTCCGTACATACCATGTGAATCTCTCGGTATTCACTTCAATTCCAGACTTCTGGGGTATTGGGCAGATGTTCCCCATAGTCCCGATTCACCGCCTCGATCAGCGGCCGGCGGTGAGGGGAGTATTGTCAGACTTGACCTGTGACAGTGACGGGAAAATCGACAAGTTCATTGGCGGCGGGTCTAGCTTGCCGCTGCATGAGCTGGAAGGCAATGGTGGGAATAATGGCGGTGGGCAAAAGTACTATTTGGGGATGTTCCTGGGCGGGGCTTATCAGGAGGCGCTCGGAGGAGTCCACAACCTCTTCGGTGGCCCGAGCATTGTTCGGGTTTCGCAGAGCGACGGTCCCCACAGCTTCGCGGTGACGCGAGCTGTGTCAGGGCCGTCATGTGGGGACGTCCTGCGGGTGATGCAGCATGAGCCCCAGCTCATGTTTGAGACGCTGAAGCACCGCGCGGAGGAGTGCGGGCAGGGTGACGATGGGGGAATGGCCAGTGCGGCTGTGGCCACCAGCCTGGCCCGGTCCTTCCACAACATGCCGTACCTGGTGTCAGCTTCTTGTAGCCTGACTGCAATGAATAACCATGGGTTCTACTATTGCAGCGAGGATGATTACGACGACATTGTTGCTGATTCGGCGGGGGCTGCTGCTCCCGTTAGCGAGGAAGAACAGTGGTCTTATTGCTGTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006576 GO:0006595 GO:0006596 GO:0006807 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0008792 GO:0009058 GO:0009266 GO:0009308 GO:0009309 GO:0009409 GO:0009445 GO:0009446 GO:0009507 GO:0009536 GO:0009611 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009753 GO:0009987 GO:0010033 GO:0016829 GO:0016830 GO:0016831 GO:0033993 GO:0034641 GO:0042221 GO:0042401 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044106 GO:0044237 GO:0044249 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046983 GO:0050896 GO:0071704 GO:0080167 GO:0097164 GO:0097305 GO:1901564 GO:1901566 GO:1901576 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00330 ko01100 map00330 map01100

Pfam Domains

Protein Families

Orn_Arg_deC_N

Protein Analysis

728

Amino Acids

78.03

Weight (kDa)

5.31

Isoelectric Point (pI)

44.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Orn_Arg_deC_N	PF02784	144 - 397	2.1e-35	Pyridoxal-dependent decarboxylase, pyridoxal binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0012001)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16500 AT4G34710 AT4G34710
fragaria_vesca	FvH4_2g10570
malus_domestica	MD05G1055300.v1.1 MD10G1062500.v1.1
prunus_persica	Prupe.8G083100_v2.0.a1
pyrus_communis	pycom05g04560 pycom10g04830
rosa_chinensis	RchiOBHm_Chr6g0268211
rosa_laevigata	RLG00000013925
rosa_multiflora	Rmu_sc0009095.1_g000007
rosa_roxburghii	Rroxscaffold_7G00199960
rosa_rugosa	Rorug06G0039700.1
rosa_samantha	Rh6AG159800 Rh6BG163700 Rh6CG154300 Rh6DG149600
rosa_wichuraiana	Rw6G013820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	473
AatII	GACGTC	1 cut(s)	1890
AccB1I	GGYRCC	3 cut(s)	37, 389, 989
AccBSI	CCGCTC	1 cut(s)	337
AccII	CGCG	6 cut(s)	80, 843, 1850, 1858, 1944, 1946
AclWI	GGATC	4 cut(s)	400, 910, 1038, 1051
AcoI	YGGCCR	6 cut(s)	46, 552, 1174, 1595, 1980, 1995
AcuI	CTGAAG	1 cut(s)	1955
AcyI	GRCGYC	6 cut(s)	38, 390, 585, 747, 956, 1887
AdeI	CACNNNGTG	1 cut(s)	1156
AfaI	GTAC	8 cut(s)	446, 623, 732, 1274, 1349, 1498, 1733, 2033
AflIII	ACRYGT	1 cut(s)	841
AgeI	ACCGGT	1 cut(s)	468
AgsI	TTSAA	9 cut(s)	303, 610, 661, 792, 1088, 1381, 1397, 1405, 1530
AjnI	CCWGG	9 cut(s)	9, 179, 258, 384, 435, 462, 1749, 2004, 2034
Alw21I	GWGCWC	3 cut(s)	363, 546, 696
Alw26I	GTCTC	3 cut(s)	915, 989, 1922
AlwI	GGATC	4 cut(s)	400, 910, 1038, 1051
Ama87I	CYCGRG	2 cut(s)	374, 1804
ApaI	GGGCCC	1 cut(s)	192
ArsI	GACNNNNNNTTYG	2 cut(s)	757, 789
AsiGI	ACCGGT	1 cut(s)	468
AspLEI	GCGC	4 cut(s)	40, 392, 1774, 1946
AsuC2I	CCSGG	7 cut(s)	45, 61, 449, 529, 752, 1154, 2011
AsuII	TTCGAA	1 cut(s)	1466
AvaI	CYCGRG	2 cut(s)	374, 1804
AvaII	GGWCC	9 cut(s)	141, 367, 411, 466, 501, 979, 1140, 1835, 2013
BaeGI	GKGCMC	2 cut(s)	192, 994
BalI	TGGCCA	3 cut(s)	554, 1982, 1997
BamHI	GGATCC	1 cut(s)	1043
BanI	GGYRCC	3 cut(s)	37, 389, 989
BanII	GRGCYC	4 cut(s)	192, 546, 696, 1914
BauI	CACGAG	1 cut(s)	1302
Bbv12I	GWGCWC	3 cut(s)	363, 546, 696
BccI	CCATC	4 cut(s)	119, 1034, 1439, 1964
BceAI	ACGGC	9 cut(s)	70, 209, 258, 439, 942, 1088, 1096, 1858, 2014
BcgI	CGANNNNNNTGC	4 cut(s)	913, 947, 2099, 2133
BciT130I	CCWGG	9 cut(s)	11, 181, 260, 386, 437, 464, 1751, 2006, 2036
BciVI	GTATCC	1 cut(s)	958
BcnI	CCSGG	7 cut(s)	45, 61, 449, 529, 752, 1154, 2011
BcoDI	GTCTC	3 cut(s)	915, 989, 1922
BfaI	CTAG	3 cut(s)	15, 1053, 1674
BfoI	RGCGCY	3 cut(s)	41, 393, 1775
BfuI	GTATCC	1 cut(s)	958
BglI	GCCNNNNNGGC	1 cut(s)	1988
BmcAI	AGTACT	2 cut(s)	1274, 1733
Bme18I	GGWCC	9 cut(s)	141, 367, 411, 466, 501, 979, 1140, 1835, 2013
BmeT110I	CYCGRG	2 cut(s)	374, 1804
BmsI	GCATC	6 cut(s)	16, 166, 1231, 1276, 1490, 1890
BplI	GAGNNNNNCTC	4 cut(s)	611, 643, 1082, 1114
BpmI	CTGGAG	1 cut(s)	368
Bpu14I	TTCGAA	1 cut(s)	1466
BpuEI	CTTGAG	4 cut(s)	347, 638, 698, 746
BpuMI	CCSGG	7 cut(s)	45, 61, 449, 529, 752, 1154, 2011
Bsa29I	ATCGAT	2 cut(s)	174, 267
BsaBI	GATNNNNATC	2 cut(s)	278, 1048
BsaHI	GRCGYC	6 cut(s)	38, 390, 585, 747, 956, 1887
BsaI	GGTCTC	1 cut(s)	915
BsaJI	CCNNGG	9 cut(s)	9, 60, 180, 385, 436, 951, 1182, 1750, 2074
BsaWI	WCCGGW	4 cut(s)	307, 408, 468, 510
BsaXI	ACNNNNNCTCC	2 cut(s)	410, 440
Bse118I	RCCGGY	4 cut(s)	4, 369, 468, 1597
Bse1I	ACTGG	3 cut(s)	525, 1227, 1983
Bse3DI	GCAATG	3 cut(s)	607, 1708, 2070
Bse8I	GATNNNNATC	2 cut(s)	278, 1048
BseBI	CCWGG	9 cut(s)	11, 181, 260, 386, 437, 464, 1751, 2006, 2036
BseCI	ATCGAT	2 cut(s)	174, 267
BseDI	CCNNGG	9 cut(s)	9, 60, 180, 385, 436, 951, 1182, 1750, 2074
BseGI	GGATG	4 cut(s)	31, 1300, 1749, 2104
BseJI	GATNNNNATC	2 cut(s)	278, 1048
BseMI	GCAATG	3 cut(s)	607, 1708, 2070
BseMII	CTCAG	3 cut(s)	105, 845, 926
BseNI	ACTGG	3 cut(s)	525, 1227, 1983
BseRI	GAGGAG	6 cut(s)	199, 536, 701, 704, 1794, 1964
BseSI	GKGCMC	2 cut(s)	192, 994
BseX3I	CGGCCG	2 cut(s)	1174, 1595
BseYI	CCCAGC	2 cut(s)	865, 1914
Bsh1236I	CGCG	6 cut(s)	80, 843, 1850, 1858, 1944, 1946
Bsh1285I	CGRYCG	2 cut(s)	1177, 1598
BshNI	GGYRCC	3 cut(s)	37, 389, 989
BshTI	ACCGGT	1 cut(s)	468
BshVI	ATCGAT	2 cut(s)	174, 267
BsiEI	CGRYCG	2 cut(s)	1177, 1598
BsiHKAI	GWGCWC	3 cut(s)	363, 546, 696
BsiHKCI	CYCGRG	2 cut(s)	374, 1804
BsiWI	CGTACG	1 cut(s)	730
BslFI	GGGAC	8 cut(s)	127, 253, 364, 397, 487, 1556, 1821, 1898
BsmAI	GTCTC	3 cut(s)	915, 989, 1922
BsmBI	CGTCTC	2 cut(s)	989, 1922
BsmFI	GGGAC	8 cut(s)	127, 253, 364, 397, 487, 1556, 1821, 1898
BsmI	GAATGC	1 cut(s)	772
Bso31I	GGTCTC	1 cut(s)	915
BsoBI	CYCGRG	2 cut(s)	374, 1804
Bsp119I	TTCGAA	1 cut(s)	1466
Bsp120I	GGGCCC	1 cut(s)	188
Bsp1286I	GDGCHC	6 cut(s)	192, 363, 546, 696, 994, 1914
Bsp143I	GATC	9 cut(s)	264, 268, 279, 397, 405, 915, 1043, 1372, 1588
Bsp19I	CCATGG	1 cut(s)	2074
BspCNI	CTCAG	3 cut(s)	104, 844, 925
BspDI	ATCGAT	2 cut(s)	174, 267
BspFNI	CGCG	6 cut(s)	80, 843, 1850, 1858, 1944, 1946
BspPI	GGATC	4 cut(s)	400, 910, 1038, 1051
BspT104I	TTCGAA	1 cut(s)	1466
BspT107I	GGYRCC	3 cut(s)	37, 389, 989
BspTNI	GGTCTC	1 cut(s)	915
BsrBI	CCGCTC	1 cut(s)	337
BsrDI	GCAATG	3 cut(s)	607, 1708, 2070
BsrFI	RCCGGY	4 cut(s)	4, 369, 468, 1597
BsrI	ACTGG	3 cut(s)	525, 1227, 1983
BssAI	RCCGGY	4 cut(s)	4, 369, 468, 1597
BssECI	CCNNGG	9 cut(s)	9, 60, 180, 385, 436, 951, 1182, 1750, 2074
BssMI	GATC	9 cut(s)	264, 268, 279, 397, 405, 915, 1043, 1372, 1588
BssNI	GRCGYC	6 cut(s)	38, 390, 585, 747, 956, 1887
BssSI	CACGAG	1 cut(s)	1302
BssT1I	CCWWGG	2 cut(s)	1182, 2074
Bst2BI	CACGAG	1 cut(s)	1302
Bst2UI	CCWGG	9 cut(s)	11, 181, 260, 386, 437, 464, 1751, 2006, 2036
Bst4CI	ACNGT	8 cut(s)	202, 667, 971, 1117, 1441, 1637, 1835, 2163
Bst6I	CTCTTC	3 cut(s)	78, 1083, 1799
BstACI	GRCGYC	6 cut(s)	38, 390, 585, 747, 956, 1887
BstBI	TTCGAA	1 cut(s)	1466
BstC8I	GCNNGC	9 cut(s)	6, 646, 650, 654, 936, 1599, 1679, 1860, 1958
BstDEI	CTNAG	3 cut(s)	91, 831, 912
BstDSI	CCRYGG	1 cut(s)	2074
BstF5I	GGATG	4 cut(s)	31, 1300, 1749, 2104
BstFNI	CGCG	6 cut(s)	80, 843, 1850, 1858, 1944, 1946
BstH2I	RGCGCY	3 cut(s)	41, 393, 1775
BstHHI	GCGC	4 cut(s)	40, 392, 1774, 1946
BstKTI	GATC	9 cut(s)	267, 271, 282, 400, 408, 918, 1046, 1375, 1591
BstMAI	GTCTC	3 cut(s)	915, 989, 1922
BstMBI	GATC	9 cut(s)	264, 268, 279, 397, 405, 915, 1043, 1372, 1588
BstMCI	CGRYCG	2 cut(s)	1177, 1598
BstNI	CCWGG	9 cut(s)	11, 181, 260, 386, 437, 464, 1751, 2006, 2036
BstNSI	RCATGY	1 cut(s)	2029
BstSLI	GKGCMC	2 cut(s)	192, 994
BstUI	CGCG	6 cut(s)	80, 843, 1850, 1858, 1944, 1946
BstX2I	RGATCY	2 cut(s)	915, 1043
BstXI	CCANNNNNNTGG	2 cut(s)	1542, 2005
BstYI	RGATCY	2 cut(s)	915, 1043
BstZI	CGGCCG	2 cut(s)	1174, 1595
Bsu15I	ATCGAT	2 cut(s)	174, 267
BsuI	GTATCC	1 cut(s)	958
BsuTUI	ATCGAT	2 cut(s)	174, 267
BtgI	CCRYGG	1 cut(s)	2074
BtsCI	GGATG	4 cut(s)	31, 1300, 1749, 2104
BtsI	GCAGTG	1 cut(s)	1171
BtsIMutI	CAGTG	6 cut(s)	663, 1171, 1234, 1642, 1990, 2168
Cac8I	GCNNGC	9 cut(s)	6, 646, 650, 654, 936, 1599, 1679, 1860, 1958
CfoI	GCGC	4 cut(s)	40, 392, 1774, 1946
Cfr10I	RCCGGY	4 cut(s)	4, 369, 468, 1597
ClaI	ATCGAT	2 cut(s)	174, 267
CseI	GACGC	7 cut(s)	69, 593, 736, 945, 1496, 1864, 1939
CsiI	ACCWGGT	1 cut(s)	2034
Csp6I	GTAC	8 cut(s)	445, 622, 731, 1273, 1348, 1497, 1732, 2032
CspAI	ACCGGT	1 cut(s)	468
CviQI	GTAC	8 cut(s)	445, 622, 731, 1273, 1348, 1497, 1732, 2032
DdeI	CTNAG	3 cut(s)	91, 831, 912
DinI	GGCGCC	2 cut(s)	39, 391
DpnI	GATC	9 cut(s)	266, 270, 281, 399, 407, 917, 1045, 1374, 1590
DpnII	GATC	9 cut(s)	264, 268, 279, 397, 405, 915, 1043, 1372, 1588
DraIII	CACNNNGTG	1 cut(s)	1156
DrdI	GACNNNNNNGTC	1 cut(s)	473
DseDI	GACNNNNNNGTC	1 cut(s)	473
EaeI	YGGCCR	6 cut(s)	46, 552, 1174, 1595, 1980, 1995
EagI	CGGCCG	2 cut(s)	1174, 1595
Eam1104I	CTCTTC	3 cut(s)	78, 1083, 1799
EarI	CTCTTC	3 cut(s)	78, 1083, 1799
EciI	GGCGGA	2 cut(s)	1090, 1246
Ecl136II	GAGCTC	2 cut(s)	544, 694
EclXI	CGGCCG	2 cut(s)	1174, 1595
Eco130I	CCWWGG	2 cut(s)	1182, 2074
Eco24I	GRGCYC	4 cut(s)	192, 546, 696, 1914
Eco31I	GGTCTC	1 cut(s)	915
Eco47I	GGWCC	9 cut(s)	141, 367, 411, 466, 501, 979, 1140, 1835, 2013
Eco52I	CGGCCG	2 cut(s)	1174, 1595
Eco53kI	GAGCTC	2 cut(s)	544, 694
Eco57I	CTGAAG	1 cut(s)	1955
Eco88I	CYCGRG	2 cut(s)	374, 1804
EcoICRI	GAGCTC	2 cut(s)	544, 694
EcoO109I	RGGNCCY	2 cut(s)	189, 501
EcoRII	CCWGG	9 cut(s)	9, 179, 258, 384, 435, 462, 1749, 2004, 2034
EcoT14I	CCWWGG	2 cut(s)	1182, 2074
EcoT38I	GRGCYC	4 cut(s)	192, 546, 696, 1914
EgeI	GGCGCC	2 cut(s)	39, 391
EheI	GGCGCC	2 cut(s)	39, 391
ErhI	CCWWGG	2 cut(s)	1182, 2074
Esp3I	CGTCTC	2 cut(s)	989, 1922
FalI	AAGNNNNNCTT	2 cut(s)	641, 673
FaqI	GGGAC	8 cut(s)	127, 253, 364, 397, 487, 1556, 1821, 1898
FauI	CCCGC	7 cut(s)	85, 653, 1661, 1748, 1887, 1949, 2122
FokI	GGATG	4 cut(s)	38, 1307, 1756, 2111
FriOI	GRGCYC	4 cut(s)	192, 546, 696, 1914
FspBI	CTAG	3 cut(s)	15, 1053, 1674
GlaI	GCGC	4 cut(s)	39, 391, 1773, 1945
GsaI	CCCAGC	2 cut(s)	869, 1918
GsuI	CTGGAG	1 cut(s)	368
HaeII	RGCGCY	3 cut(s)	41, 393, 1775
HgaI	GACGC	7 cut(s)	69, 593, 736, 945, 1496, 1864, 1939
HhaI	GCGC	4 cut(s)	40, 392, 1774, 1946
Hin1I	GRCGYC	6 cut(s)	38, 390, 585, 747, 956, 1887
Hin6I	GCGC	4 cut(s)	38, 390, 1772, 1944
HinP1I	GCGC	4 cut(s)	38, 390, 1772, 1944
HincII	GTYRAC	1 cut(s)	205
HindII	GTYRAC	1 cut(s)	205
HindIII	AAGCTT	1 cut(s)	854
Hpy166II	GTNNAC	4 cut(s)	205, 445, 1133, 1786
Hpy188III	TCNNGA	7 cut(s)	283, 581, 677, 763, 1535, 1573, 1766
Hpy8I	GTNNAC	4 cut(s)	205, 445, 1133, 1786
Hpy99I	CGWCG	9 cut(s)	85, 224, 479, 587, 928, 961, 1445, 1835, 2111
HpyCH4III	ACNGT	8 cut(s)	202, 667, 971, 1117, 1441, 1637, 1835, 2163
HpyCH4IV	ACGT	5 cut(s)	219, 1125, 1364, 1460, 1887
HpyF3I	CTNAG	3 cut(s)	91, 831, 912
HpySE526I	ACGT	5 cut(s)	219, 1125, 1364, 1460, 1887
Hsp92I	GRCGYC	6 cut(s)	38, 390, 585, 747, 956, 1887
HspAI	GCGC	4 cut(s)	38, 390, 1772, 1944
KasI	GGCGCC	2 cut(s)	37, 389
KflI	GGGWCCC	1 cut(s)	501
KroI	GCCGGC	2 cut(s)	4, 1597
KroNI	GCCGGC	2 cut(s)	6, 1599
Kzo9I	GATC	9 cut(s)	264, 268, 279, 397, 405, 915, 1043, 1372, 1588
LmnI	GCTCC	6 cut(s)	431, 541, 549, 691, 1249, 2146
LweI	GCATC	6 cut(s)	16, 166, 1231, 1276, 1490, 1890
MabI	ACCWGGT	1 cut(s)	2034
MaeI	CTAG	3 cut(s)	15, 1053, 1674
MaeII	ACGT	5 cut(s)	219, 1125, 1364, 1460, 1887
MaeIII	GTNAC	5 cut(s)	1055, 1631, 1637, 1852, 1964
MalI	GATC	9 cut(s)	266, 270, 281, 399, 407, 917, 1045, 1374, 1590
MbiI	CCGCTC	1 cut(s)	337
MboI	GATC	9 cut(s)	264, 268, 279, 397, 405, 915, 1043, 1372, 1588
MboII	GAAGA	7 cut(s)	65, 289, 298, 1100, 1215, 1786, 2168
MflI	RGATCY	2 cut(s)	915, 1043
MhlI	GDGCHC	6 cut(s)	192, 363, 546, 696, 994, 1914
MlsI	TGGCCA	3 cut(s)	554, 1982, 1997
MluCI	AATT	5 cut(s)	130, 974, 1400, 1430, 1530
MluI	ACGCGT	1 cut(s)	841
MluNI	TGGCCA	3 cut(s)	554, 1982, 1997
Mly113I	GGCGCC	2 cut(s)	38, 390
MlyI	GAGTC	5 cut(s)	241, 386, 813, 1052, 1791
MmeI	TCCRAC	1 cut(s)	183
Mox20I	TGGCCA	3 cut(s)	554, 1982, 1997
MroNI	GCCGGC	2 cut(s)	4, 1597
MscI	TGGCCA	3 cut(s)	554, 1982, 1997
MseI	TTAA	1 cut(s)	2182
Msp20I	TGGCCA	3 cut(s)	554, 1982, 1997
MspA1I	CMGCKG	4 cut(s)	331, 1328, 1594, 1684
Mva1269I	GAATGC	1 cut(s)	772
MvaI	CCWGG	9 cut(s)	11, 181, 260, 386, 437, 464, 1751, 2006, 2036
MvnI	CGCG	6 cut(s)	80, 843, 1850, 1858, 1944, 1946
NaeI	GCCGGC	2 cut(s)	6, 1599
NarI	GGCGCC	2 cut(s)	38, 390
NciI	CCSGG	7 cut(s)	45, 61, 449, 529, 752, 1154, 2011
NcoI	CCATGG	1 cut(s)	2074
NdeII	GATC	9 cut(s)	264, 268, 279, 397, 405, 915, 1043, 1372, 1588
NgoMIV	GCCGGC	2 cut(s)	4, 1597
NmeAIII	GCCGAG	2 cut(s)	705, 1202
NmuCI	GTSAC	5 cut(s)	1055, 1631, 1637, 1852, 1964
NspI	RCATGY	1 cut(s)	2029
NspV	TTCGAA	1 cut(s)	1466
PaeR7I	CTCGAG	1 cut(s)	374
PcsI	WCGNNNNNNNCGW	2 cut(s)	942, 1647
PctI	GAATGC	1 cut(s)	772
PdiI	GCCGGC	2 cut(s)	6, 1599
PfeI	GAWTC	6 cut(s)	171, 299, 606, 1510, 1576, 2123
Pfl23II	CGTACG	1 cut(s)	730
PflFI	GACNNNGTC	2 cut(s)	488, 1490
PinAI	ACCGGT	1 cut(s)	468
PleI	GAGTC	5 cut(s)	241, 385, 813, 1052, 1790
PluTI	GGCGCC	2 cut(s)	41, 393
PpsI	GAGTC	5 cut(s)	241, 385, 813, 1052, 1790
PpuMI	RGGWCCY	1 cut(s)	501
Psp124BI	GAGCTC	2 cut(s)	546, 696
Psp5II	RGGWCCY	1 cut(s)	501
Psp6I	CCWGG	9 cut(s)	9, 179, 258, 384, 435, 462, 1749, 2004, 2034
PspFI	CCCAGC	2 cut(s)	865, 1914
PspGI	CCWGG	9 cut(s)	9, 179, 258, 384, 435, 462, 1749, 2004, 2034
PspLI	CGTACG	1 cut(s)	730
PspOMI	GGGCCC	1 cut(s)	188
PspPPI	RGGWCCY	1 cut(s)	501
PspXI	VCTCGAGB	1 cut(s)	374
PsuI	RGATCY	2 cut(s)	915, 1043
PsyI	GACNNNGTC	2 cut(s)	488, 1490
PvuII	CAGCTG	1 cut(s)	331
RsaI	GTAC	8 cut(s)	446, 623, 732, 1274, 1349, 1498, 1733, 2033
RsaNI	GTAC	8 cut(s)	445, 622, 731, 1273, 1348, 1497, 1732, 2032
SacI	GAGCTC	2 cut(s)	546, 696
SaqAI	TTAA	1 cut(s)	2182
Sau3AI	GATC	9 cut(s)	264, 268, 279, 397, 405, 915, 1043, 1372, 1588
ScaI	AGTACT	2 cut(s)	1274, 1733
SchI	GAGTC	5 cut(s)	241, 386, 813, 1052, 1791
SduI	GDGCHC	6 cut(s)	192, 363, 546, 696, 994, 1914
SexAI	ACCWGGT	1 cut(s)	2034
SfaNI	GCATC	6 cut(s)	16, 166, 1231, 1276, 1490, 1890
SfoI	GGCGCC	2 cut(s)	39, 391
Sfr274I	CTCGAG	1 cut(s)	374
SfuI	TTCGAA	1 cut(s)	1466
SinI	GGWCC	9 cut(s)	141, 367, 411, 466, 501, 979, 1140, 1835, 2013
SlaI	CTCGAG	1 cut(s)	374
SmlI	CTYRAG	5 cut(s)	362, 374, 617, 677, 761
SmoI	CTYRAG	5 cut(s)	362, 374, 617, 677, 761
Sse9I	AATT	5 cut(s)	130, 974, 1400, 1430, 1530
SspDI	GGCGCC	2 cut(s)	37, 389
SspMI	CTAG	3 cut(s)	15, 1053, 1674
SstI	GAGCTC	2 cut(s)	546, 696
StyI	CCWWGG	2 cut(s)	1182, 2074
TaaI	ACNGT	8 cut(s)	202, 667, 971, 1117, 1441, 1637, 1835, 2163
TaiI	ACGT	5 cut(s)	222, 1128, 1367, 1463, 1890
TaqII	GACCGA	1 cut(s)	1060
TasI	AATT	5 cut(s)	130, 974, 1400, 1430, 1530
TatI	WGTACW	3 cut(s)	621, 1272, 1731
TauI	GCSGC	8 cut(s)	256, 337, 1176, 1334, 1597, 1668, 1684, 1991
TfiI	GAWTC	6 cut(s)	171, 299, 606, 1510, 1576, 2123
Tru1I	TTAA	1 cut(s)	2182
Tru9I	TTAA	1 cut(s)	2182
TscAI	CASTG	6 cut(s)	670, 1171, 1234, 1642, 1990, 2168
TseFI	GTSAC	5 cut(s)	1055, 1631, 1637, 1852, 1964
Tsp45I	GTSAC	5 cut(s)	1055, 1631, 1637, 1852, 1964
TspDTI	ATGAA	7 cut(s)	290, 890, 1013, 1267, 1311, 1648, 2081
TspGWI	ACGGA	7 cut(s)	218, 971, 1132, 1150, 1307, 1402, 1484
TspRI	CASTG	6 cut(s)	670, 1171, 1234, 1642, 1990, 2168
Tth111I	GACNNNGTC	2 cut(s)	488, 1490
VpaK11BI	GGWCC	9 cut(s)	141, 367, 411, 466, 501, 979, 1140, 1835, 2013
XceI	RCATGY	1 cut(s)	2029
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1990
XhoI	CTCGAG	1 cut(s)	374
XspI	CTAG	3 cut(s)	15, 1053, 1674
ZraI	GACGTC	1 cut(s)	1888
ZrmI	AGTACT	2 cut(s)	1274, 1733

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.