Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0012001

Physical Location & Seq

Genomic Coordinates Forward (+)

5108206 .. 5110827

Gene Structure 2622 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g04830.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2499 bp

ATGCCGGCCCTGGCTTGTTGCGTGGACGCTGCTGCGGCGCCTCCCGGCCACCACTTCGCCGGGGATAGCTCTCTTCCCGCGTCGCCGTTCTCAGGCGTACCACCGGCGGCCATCACCACCGCCCCCGCCGCCGACAATTCCCATTGGTCCCCGTCCCTCTCGTCCGACCTCTACCGAATCGACGCCTGGGGTGGGCCCTACTTCACCGGCGACTCTGCCGCACCAGGAGATCGATCTGCTGAAGATCGTGAAGAAGGTTTCGGATCCGAAACCGGACTGCGGGCTCGGGTTGCAGCTACCGCTCATTGTTCGCCTGCCCGATGTGCTCAAGAACCGGCTCGAGTCGCTCCAGGGCGCCTTCGATCTGGCGATCCGGTCCCACGACTACGGCTCCCACTACCAGGGCGTGTACCCGGTGAAATGCAACCAGGACCGGTTCGTCGTGGAGGACATTGTGAAGTTTGGATCGATCCGTTCCGGTTCGGATTGGAAGCCGGGTCGAAGCCGGAGCTCCTCTTGGCCATGAGCTGCTTATGCAAAGGTAACCCCGATGCCCTTCTCATCTGCAATGGGTTCAAAGACTTGGAATACATTTCTCTGGCGCTGTTTGCTCGCAAGCTCGCCTTGAACACCGTGATTGTTCTCGAGCAAGAGGAGGAGCTCGATTTGGTCGTTGATTTGAGTCAGAAGCTCGGTGTTCGACCTGTGATTGGCGTCCGCGCTAAGCTCAAGACCAAGCATTCGGGCCATTTTGGTTCGACGTCGGGCGAGAAGGGGAAGTTTGGACTCACCACCACTCAGATTTTACGCGTTGTGAAGAAGCTTGATAAGCTGGGTATGCCTGATTGCTTTCAGTTGTTGCATTTTCATATCGGGTCTCAGATCCCGTCGACGTATCTGCTCGCTGATGGCGTATCCGAGGCGGCACAGATCTACTGCGAATTGGTTCGCCTCGGTGCCCAAATGAAGGTCTTAGACATAGGAGGGGGTCTGGGTATTGATTATGATGGTTCCAAATCGAGTAACTCGGATATTTCGGTCAGCTACAGCCTTGAAGAGTATGCCTCCGCTGTTGTCCAAGCAGTTCGGAACGTTTGCGAACGGAGGTCCGTGAAGCACCCGGTGATTTGCAGCGAAAGCGGCCGAGCCCTGGTGTCCCATCACTCGGTTCTGATATTTGAGGCTGTTTCTTCCAGTGCTTGTGACGATGCTCCTCCCATGTCCGCCTATGAGCTTCAGTACTTCATCGAGGGGCTGACGGAGGAAGCTCGTGCCGATTACCTGAACCTCTCCGCTGCGGCAATCAGAGGTGAGTACGAGGCTTGTTTGACGTACGCTGATGTGTTGAAGCAACGGTGTGTTGAACAATTCAAAGAAGGCTCTGTTGGTATTGAGCAATTAGCCACCGTTGATGGACTCTGTGATATGGTTTCGAAAGCAATCGGAGCATTTGACCCTGTCCGCACATACCATGTGAATCTCTCGGTTTTCACTTCAATTCCAGACTTCTGGGGTATTGGGCAGATGTTTCCGATTGTCCCGATTCACCGCCTCGACCAGCGGCCGGCGATGAGGGGGGTATTGTCAGACTTGACCTGTGACAGTGATGGGAAGATCGACAAGTTCATTGGCGGCGAGTCTAGCTTGCCGCTGCATGAGCTGGAAGGCAATGGTGGGAATAATGGTGGTGGGCAAAAGTACTATTTAGGGATGTTCTTGGGCGGGGCTTATCAGGAGGCGCTCGGAGGAGTCCACAACCTCTTCGGTGGCCCGAGCATTGTTCGGGTCTCGCAGAGCGATGGTCCCCACAGCTTTGCAGTGACGCGGGCTGTGCCAGGGCCGTCGTGTGGGGACGTCCTGCGGGTGATGCAGCATGAGCCCGAGCTCATGTTTGAGACGCTGAAGCACCGCGCGGAGGAGTGCGGGCAGGGCGATGATGGGGGCATGGCAAGTGCAGCTGTGGCCACCAGCCTCGCCGGGTCCTTCCACAACATGCCGTATCTGGTGACAGCTTCTTCTTGTAGCATGAGTGCAATGAATAACCATGGGTTCTACTATTGCAGCGAGGATGATTACGACGATGTTGTTTCGGATTCGACGGGGACTGCTGCTTCTGCCGGTGAGGAGGAACAGTGTTTGATGTCGGTGTGTCTGCCGGGGCCGTCTGTTTTTAAAATTTACAAGAAAGTCCTTTGTAATTTGTGGCAAAAAAGTTGGGGGAATTGGGAGCCGAATCCGCCCTTTTGTAAATTGAGGGGCTTATTCCCCTCTTCCTATGTTTTCTTAGTAGTCAAATATTTTTGCTTTTTAAGATATTTTGTCTTCCAACCAAATCTTAATTTTTGCCTTTTGTTCCTCCTTTGTATGGTACTCGTCATGTTCTCGATTGCTTTCTTTCTTTGCATGTTAGGTCAATTAACCAAAACAGTGTTCTCGAATTTGAATTCTTTCGTTAGCTTAGAATGCTTCGCAATTAAAGATGACAAATCAACTTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006576 GO:0006595 GO:0006596 GO:0006807 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0008792 GO:0009058 GO:0009266 GO:0009308 GO:0009309 GO:0009409 GO:0009445 GO:0009446 GO:0009507 GO:0009536 GO:0009611 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009753 GO:0009987 GO:0010033 GO:0016829 GO:0016830 GO:0016831 GO:0033993 GO:0034641 GO:0042221 GO:0042401 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044106 GO:0044237 GO:0044249 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046983 GO:0050896 GO:0071704 GO:0080167 GO:0097164 GO:0097305 GO:1901564 GO:1901566 GO:1901576 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00330 ko01100 map00330 map01100

Pfam Domains

Protein Families

Orn_Arg_deC_N

Protein Analysis

833

Amino Acids

89.89

Weight (kDa)

5.45

Isoelectric Point (pI)

45.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Orn_Arg_deC_N	PF02784	162 - 386	1.9e-30	Pyridoxal-dependent decarboxylase, pyridoxal binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012001)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16500 AT4G34710 AT4G34710
fragaria_vesca	FvH4_2g10570
malus_domestica	MD05G1055300.v1.1 MD10G1062500.v1.1
prunus_persica	Prupe.8G083100_v2.0.a1
pyrus_communis	pycom05g04560 pycom10g04830
rosa_chinensis	RchiOBHm_Chr6g0268211
rosa_laevigata	RLG00000013925
rosa_multiflora	Rmu_sc0009095.1_g000007
rosa_roxburghii	Rroxscaffold_7G00199960
rosa_rugosa	Rorug06G0039700.1
rosa_samantha	Rh6AG159800 Rh6BG163700 Rh6CG154300 Rh6DG149600
rosa_wichuraiana	Rw6G013820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	438
AatII	GACGTC	2 cut(s)	764, 1857
AccB1I	GGYRCC	3 cut(s)	37, 354, 956
AccBSI	CCGCTC	1 cut(s)	302
AccI	GTMKAC	1 cut(s)	890
AccII	CGCG	6 cut(s)	80, 720, 810, 1825, 1911, 1913
AclI	AACGTT	1 cut(s)	1092
AclWI	GGATC	6 cut(s)	258, 271, 365, 464, 473, 877
AcoI	YGGCCR	6 cut(s)	46, 108, 519, 1141, 1562, 1962
AcsI	RAATTY	3 cut(s)	2175, 2437, 2443
AcuI	CTGAAG	3 cut(s)	261, 1220, 1922
AcyI	GRCGYC	6 cut(s)	38, 183, 355, 714, 761, 1854
AdeI	CACNNNGTG	1 cut(s)	1123
AfaI	GTAC	7 cut(s)	99, 411, 1241, 1316, 1334, 1700, 2370
AflIII	ACRYGT	1 cut(s)	808
AgeI	ACCGGT	1 cut(s)	433
AgsI	TTSAA	8 cut(s)	577, 628, 1055, 1348, 1364, 1372, 1497, 2443
AjnI	CCWGG	8 cut(s)	9, 185, 223, 349, 400, 427, 1149, 1834
AjuI	GAANNNNNNNTTGG	4 cut(s)	1368, 1400, 2414, 2446
Alw21I	GWGCWC	4 cut(s)	328, 513, 663, 1887
Alw26I	GTCTC	3 cut(s)	882, 1792, 1889
AlwI	GGATC	6 cut(s)	258, 271, 365, 464, 473, 877
Ama87I	CYCGRG	5 cut(s)	285, 339, 644, 1771, 1880
ApaI	GGGCCC	1 cut(s)	198
ApoI	RAATTY	3 cut(s)	2175, 2437, 2443
ArsI	GACNNNNNNTTYG	2 cut(s)	724, 756
AsiGI	ACCGGT	1 cut(s)	433
Asp700I	GAANNNNTTC	2 cut(s)	945, 2447
AspLEI	GCGC	6 cut(s)	40, 357, 604, 722, 1741, 1913
AsuC2I	CCSGG	7 cut(s)	45, 61, 414, 496, 1121, 1978, 2157
AsuII	TTCGAA	1 cut(s)	1433
AvaI	CYCGRG	5 cut(s)	285, 339, 644, 1771, 1880
AvaII	GGWCC	6 cut(s)	147, 376, 431, 1107, 1802, 1980
BaeGI	GKGCMC	2 cut(s)	198, 961
BalI	TGGCCA	2 cut(s)	521, 1964
BamHI	GGATCC	1 cut(s)	263
BanI	GGYRCC	3 cut(s)	37, 354, 956
BanII	GRGCYC	7 cut(s)	198, 286, 513, 663, 1150, 1881, 1887
BauI	CACGAG	1 cut(s)	1269
BbsI	GAAGAC	1 cut(s)	2314
Bbv12I	GWGCWC	4 cut(s)	328, 513, 663, 1887
BccI	CCATC	8 cut(s)	119, 902, 1001, 1167, 1406, 1601, 1793, 1931
BceAI	ACGGC	5 cut(s)	70, 404, 1825, 1981, 2146
BcgI	CGANNNNNNTGC	2 cut(s)	880, 914
BciT130I	CCWGG	8 cut(s)	11, 187, 225, 351, 402, 429, 1151, 1836
BciVI	GTATCC	1 cut(s)	925
BcnI	CCSGG	7 cut(s)	45, 61, 414, 496, 1121, 1978, 2157
BcoDI	GTCTC	3 cut(s)	882, 1792, 1889
BfaI	CTAG	1 cut(s)	1641
BfmI	CTRYAG	1 cut(s)	1045
BfoI	RGCGCY	4 cut(s)	41, 358, 605, 1742
BfuI	GTATCC	1 cut(s)	925
BglII	AGATCT	1 cut(s)	930
BlpI	GCTNAGC	1 cut(s)	723
BmcAI	AGTACT	2 cut(s)	1241, 1700
Bme18I	GGWCC	6 cut(s)	147, 376, 431, 1107, 1802, 1980
BmeT110I	CYCGRG	5 cut(s)	285, 339, 644, 1771, 1880
BmsI	GCATC	3 cut(s)	541, 1198, 1857
BpiI	GAAGAC	1 cut(s)	2314
BplI	GAGNNNNNCTC	2 cut(s)	1049, 1081
BpmI	CTGGAG	1 cut(s)	333
Bpu1102I	GCTNAGC	1 cut(s)	723
Bpu14I	TTCGAA	1 cut(s)	1433
BpuEI	CTTGAG	2 cut(s)	312, 713
BpuMI	CCSGG	7 cut(s)	45, 61, 414, 496, 1121, 1978, 2157
Bsa29I	ATCGAT	2 cut(s)	232, 468
BsaHI	GRCGYC	6 cut(s)	38, 183, 355, 714, 761, 1854
BsaI	GGTCTC	2 cut(s)	882, 1792
BsaWI	WCCGGW	4 cut(s)	272, 373, 433, 477
BsaXI	ACNNNNNCTCC	4 cut(s)	375, 405, 2117, 2147
Bse118I	RCCGGY	7 cut(s)	4, 103, 206, 334, 433, 1564, 2117
Bse1I	ACTGG	1 cut(s)	1194
Bse3DI	GCAATG	3 cut(s)	574, 1675, 2040
BseBI	CCWGG	8 cut(s)	11, 187, 225, 351, 402, 429, 1151, 1836
BseCI	ATCGAT	2 cut(s)	232, 468
BseGI	GGATG	2 cut(s)	1716, 2074
BseMI	GCAATG	3 cut(s)	574, 1675, 2040
BseMII	CTCAG	3 cut(s)	105, 812, 893
BseNI	ACTGG	1 cut(s)	1194
BseRI	GAGGAG	7 cut(s)	503, 668, 671, 1203, 1761, 1931, 2138
BseSI	GKGCMC	2 cut(s)	198, 961
BseX3I	CGGCCG	2 cut(s)	1141, 1562
BseYI	CCCAGC	1 cut(s)	832
BsgI	GTGCAG	1 cut(s)	1974
Bsh1236I	CGCG	6 cut(s)	80, 720, 810, 1825, 1911, 1913
Bsh1285I	CGRYCG	2 cut(s)	1144, 1565
BshNI	GGYRCC	3 cut(s)	37, 354, 956
BshTI	ACCGGT	1 cut(s)	433
BshVI	ATCGAT	2 cut(s)	232, 468
BsiEI	CGRYCG	2 cut(s)	1144, 1565
BsiHKAI	GWGCWC	4 cut(s)	328, 513, 663, 1887
BsiHKCI	CYCGRG	5 cut(s)	285, 339, 644, 1771, 1880
BsiWI	CGTACG	1 cut(s)	1332
BslFI	GGGAC	8 cut(s)	133, 139, 362, 1141, 1523, 1788, 1865, 2116
BsmAI	GTCTC	3 cut(s)	882, 1792, 1889
BsmBI	CGTCTC	1 cut(s)	1889
BsmFI	GGGAC	8 cut(s)	133, 139, 362, 1141, 1523, 1788, 1865, 2116
BsmI	GAATGC	2 cut(s)	739, 2468
Bso31I	GGTCTC	2 cut(s)	882, 1792
BsoBI	CYCGRG	5 cut(s)	285, 339, 644, 1771, 1880
Bsp119I	TTCGAA	1 cut(s)	1433
Bsp120I	GGGCCC	1 cut(s)	194
Bsp1286I	GDGCHC	9 cut(s)	198, 286, 328, 513, 663, 961, 1150, 1881, 1887
Bsp1720I	GCTNAGC	1 cut(s)	723
Bsp19I	CCATGG	1 cut(s)	2044
BspCNI	CTCAG	3 cut(s)	104, 811, 892
BspDI	ATCGAT	2 cut(s)	232, 468
BspFNI	CGCG	6 cut(s)	80, 720, 810, 1825, 1911, 1913
BspPI	GGATC	6 cut(s)	258, 271, 365, 464, 473, 877
BspT104I	TTCGAA	1 cut(s)	1433
BspT107I	GGYRCC	3 cut(s)	37, 354, 956
BspTNI	GGTCTC	2 cut(s)	882, 1792
BsrBI	CCGCTC	1 cut(s)	302
BsrDI	GCAATG	3 cut(s)	574, 1675, 2040
BsrFI	RCCGGY	7 cut(s)	4, 103, 206, 334, 433, 1564, 2117
BsrI	ACTGG	1 cut(s)	1194
BssAI	RCCGGY	7 cut(s)	4, 103, 206, 334, 433, 1564, 2117
BssNI	GRCGYC	6 cut(s)	38, 183, 355, 714, 761, 1854
BssSI	CACGAG	1 cut(s)	1269
BssT1I	CCWWGG	1 cut(s)	2044
Bst2BI	CACGAG	1 cut(s)	1269
Bst2UI	CCWGG	8 cut(s)	11, 187, 225, 351, 402, 429, 1151, 1836
Bst4CI	ACNGT	6 cut(s)	634, 1356, 1408, 1604, 2133, 2428
Bst6I	CTCTTC	4 cut(s)	78, 1050, 1766, 2275
BstACI	GRCGYC	6 cut(s)	38, 183, 355, 714, 761, 1854
BstBI	TTCGAA	1 cut(s)	1433
BstDEI	CTNAG	7 cut(s)	91, 723, 798, 879, 973, 2284, 2458
BstDSI	CCRYGG	1 cut(s)	2044
BstEII	GGTNACC	1 cut(s)	542
BstF5I	GGATG	2 cut(s)	1716, 2074
BstFNI	CGCG	6 cut(s)	80, 720, 810, 1825, 1911, 1913
BstH2I	RGCGCY	4 cut(s)	41, 358, 605, 1742
BstHHI	GCGC	6 cut(s)	40, 357, 604, 722, 1741, 1913
BstMAI	GTCTC	3 cut(s)	882, 1792, 1889
BstMCI	CGRYCG	2 cut(s)	1144, 1565
BstNI	CCWGG	8 cut(s)	11, 187, 225, 351, 402, 429, 1151, 1836
BstNSI	RCATGY	2 cut(s)	1996, 2407
BstPI	GGTNACC	1 cut(s)	542
BstSFI	CTRYAG	1 cut(s)	1045
BstSLI	GKGCMC	2 cut(s)	198, 961
BstUI	CGCG	6 cut(s)	80, 720, 810, 1825, 1911, 1913
BstV2I	GAAGAC	1 cut(s)	2314
BstX2I	RGATCY	3 cut(s)	263, 882, 930
BstXI	CCANNNNNNTGG	1 cut(s)	1509
BstYI	RGATCY	3 cut(s)	263, 882, 930
BstZI	CGGCCG	2 cut(s)	1141, 1562
Bsu15I	ATCGAT	2 cut(s)	232, 468
BsuI	GTATCC	1 cut(s)	925
BsuTUI	ATCGAT	2 cut(s)	232, 468
BtgI	CCRYGG	1 cut(s)	2044
BtgZI	GCGATG	3 cut(s)	1583, 1812, 1947
BtsCI	GGATG	2 cut(s)	1716, 2074
BtsI	GCAGTG	1 cut(s)	1824
BtsIMutI	CAGTG	5 cut(s)	1201, 1609, 1824, 2138, 2433
CfoI	GCGC	6 cut(s)	40, 357, 604, 722, 1741, 1913
Cfr10I	RCCGGY	7 cut(s)	4, 103, 206, 334, 433, 1564, 2117
ClaI	ATCGAT	2 cut(s)	232, 468
CseI	GACGC	6 cut(s)	35, 69, 191, 703, 1831, 1906
Csp6I	GTAC	7 cut(s)	98, 410, 1240, 1315, 1333, 1699, 2369
CspAI	ACCGGT	1 cut(s)	433
CviQI	GTAC	7 cut(s)	98, 410, 1240, 1315, 1333, 1699, 2369
DdeI	CTNAG	7 cut(s)	91, 723, 798, 879, 973, 2284, 2458
DinI	GGCGCC	2 cut(s)	39, 356
DraI	TTTAAA	1 cut(s)	2173
DraIII	CACNNNGTG	1 cut(s)	1123
DrdI	GACNNNNNNGTC	1 cut(s)	438
DseDI	GACNNNNNNGTC	1 cut(s)	438
EaeI	YGGCCR	6 cut(s)	46, 108, 519, 1141, 1562, 1962
EagI	CGGCCG	2 cut(s)	1141, 1562
Eam1104I	CTCTTC	4 cut(s)	78, 1050, 1766, 2275
EarI	CTCTTC	4 cut(s)	78, 1050, 1766, 2275
EciI	GGCGGA	2 cut(s)	1213, 2226
Ecl136II	GAGCTC	3 cut(s)	511, 661, 1885
EclXI	CGGCCG	2 cut(s)	1141, 1562
Eco130I	CCWWGG	1 cut(s)	2044
Eco24I	GRGCYC	7 cut(s)	198, 286, 513, 663, 1150, 1881, 1887
Eco31I	GGTCTC	2 cut(s)	882, 1792
Eco47I	GGWCC	6 cut(s)	147, 376, 431, 1107, 1802, 1980
Eco52I	CGGCCG	2 cut(s)	1141, 1562
Eco53kI	GAGCTC	3 cut(s)	511, 661, 1885
Eco57I	CTGAAG	3 cut(s)	261, 1220, 1922
Eco88I	CYCGRG	5 cut(s)	285, 339, 644, 1771, 1880
Eco91I	GGTNACC	1 cut(s)	542
EcoICRI	GAGCTC	3 cut(s)	511, 661, 1885
EcoO109I	RGGNCCY	2 cut(s)	195, 1980
EcoO65I	GGTNACC	1 cut(s)	542
EcoRI	GAATTC	1 cut(s)	2443
EcoRII	CCWGG	8 cut(s)	9, 185, 223, 349, 400, 427, 1149, 1834
EcoT14I	CCWWGG	1 cut(s)	2044
EcoT38I	GRGCYC	7 cut(s)	198, 286, 513, 663, 1150, 1881, 1887
EgeI	GGCGCC	2 cut(s)	39, 356
EheI	GGCGCC	2 cut(s)	39, 356
ErhI	CCWWGG	1 cut(s)	2044
Esp3I	CGTCTC	1 cut(s)	1889
FalI	AAGNNNNNCTT	2 cut(s)	608, 640
FaqI	GGGAC	8 cut(s)	133, 139, 362, 1141, 1523, 1788, 1865, 2116
FauI	CCCGC	7 cut(s)	85, 133, 273, 1715, 1818, 1854, 1916
FblI	GTMKAC	1 cut(s)	890
FokI	GGATG	2 cut(s)	1723, 2081
FriOI	GRGCYC	7 cut(s)	198, 286, 513, 663, 1150, 1881, 1887
FspBI	CTAG	1 cut(s)	1641
GlaI	GCGC	6 cut(s)	39, 356, 603, 721, 1740, 1912
GsaI	CCCAGC	1 cut(s)	836
GsuI	CTGGAG	1 cut(s)	333
HaeII	RGCGCY	4 cut(s)	41, 358, 605, 1742
HgaI	GACGC	6 cut(s)	35, 69, 191, 703, 1831, 1906
HhaI	GCGC	6 cut(s)	40, 357, 604, 722, 1741, 1913
Hin1I	GRCGYC	6 cut(s)	38, 183, 355, 714, 761, 1854
Hin6I	GCGC	6 cut(s)	38, 355, 602, 720, 1739, 1911
HinP1I	GCGC	6 cut(s)	38, 355, 602, 720, 1739, 1911
HincII	GTYRAC	1 cut(s)	891
HindII	GTYRAC	1 cut(s)	891
HindIII	AAGCTT	1 cut(s)	821
Hpy166II	GTNNAC	4 cut(s)	25, 410, 891, 1753
Hpy188III	TCNNGA	9 cut(s)	248, 329, 644, 730, 1502, 1540, 1733, 2383, 2434
Hpy8I	GTNNAC	4 cut(s)	25, 410, 891, 1753
HpyAV	CCTTC	8 cut(s)	248, 368, 566, 766, 961, 1370, 1658, 1993
HpyCH4III	ACNGT	6 cut(s)	634, 1356, 1408, 1604, 2133, 2428
HpyCH4IV	ACGT	5 cut(s)	761, 893, 1092, 1331, 1854
HpyF3I	CTNAG	7 cut(s)	91, 723, 798, 879, 973, 2284, 2458
HpySE526I	ACGT	5 cut(s)	761, 893, 1092, 1331, 1854
Hsp92I	GRCGYC	6 cut(s)	38, 183, 355, 714, 761, 1854
HspAI	GCGC	6 cut(s)	38, 355, 602, 720, 1739, 1911
KasI	GGCGCC	2 cut(s)	37, 354
KroI	GCCGGC	2 cut(s)	4, 1564
KroNI	GCCGGC	2 cut(s)	6, 1566
LmnI	GCTCC	8 cut(s)	352, 396, 508, 516, 658, 1216, 1445, 2227
LweI	GCATC	3 cut(s)	541, 1198, 1857
MaeI	CTAG	1 cut(s)	1641
MaeII	ACGT	5 cut(s)	761, 893, 1092, 1331, 1854
MaeIII	GTNAC	6 cut(s)	542, 1022, 1202, 1598, 1819, 2005
MbiI	CCGCTC	1 cut(s)	302
MflI	RGATCY	3 cut(s)	263, 882, 930
MhlI	GDGCHC	9 cut(s)	198, 286, 328, 513, 663, 961, 1150, 1881, 1887
MlsI	TGGCCA	2 cut(s)	521, 1964
MluI	ACGCGT	1 cut(s)	808
MluNI	TGGCCA	2 cut(s)	521, 1964
Mly113I	GGCGCC	2 cut(s)	38, 355
MlyI	GAGTC	7 cut(s)	206, 351, 691, 780, 1410, 1646, 1758
MmeI	TCCRAC	2 cut(s)	189, 2350
Mox20I	TGGCCA	2 cut(s)	521, 1964
MroNI	GCCGGC	2 cut(s)	4, 1564
MroXI	GAANNNNTTC	2 cut(s)	945, 2447
MscI	TGGCCA	2 cut(s)	521, 1964
MseI	TTAA	5 cut(s)	2172, 2309, 2337, 2417, 2475
Msp20I	TGGCCA	2 cut(s)	521, 1964
MspA1I	CMGCKG	5 cut(s)	1070, 1295, 1561, 1651, 1958
Mva1269I	GAATGC	2 cut(s)	739, 2468
MvaI	CCWGG	8 cut(s)	11, 187, 225, 351, 402, 429, 1151, 1836
MvnI	CGCG	6 cut(s)	80, 720, 810, 1825, 1911, 1913
NaeI	GCCGGC	2 cut(s)	6, 1566
NarI	GGCGCC	2 cut(s)	38, 355
NciI	CCSGG	7 cut(s)	45, 61, 414, 496, 1121, 1978, 2157
NcoI	CCATGG	1 cut(s)	2044
NgoMIV	GCCGGC	2 cut(s)	4, 1564
NmeAIII	GCCGAG	1 cut(s)	1169
NmuCI	GTSAC	4 cut(s)	1202, 1598, 1819, 2005
NspI	RCATGY	2 cut(s)	1996, 2407
NspV	TTCGAA	1 cut(s)	1433
PaeR7I	CTCGAG	2 cut(s)	339, 644
PcsI	WCGNNNNNNNCGW	2 cut(s)	669, 909
PctI	GAATGC	2 cut(s)	739, 2468
PdiI	GCCGGC	2 cut(s)	6, 1566
PdmI	GAANNNNTTC	2 cut(s)	945, 2447
PfeI	GAWTC	5 cut(s)	177, 1477, 1543, 2093, 2233
Pfl23II	CGTACG	1 cut(s)	1332
PflFI	GACNNNGTC	1 cut(s)	1457
PinAI	ACCGGT	1 cut(s)	433
PleI	GAGTC	7 cut(s)	206, 350, 690, 780, 1410, 1645, 1757
PluTI	GGCGCC	2 cut(s)	41, 358
PpsI	GAGTC	7 cut(s)	206, 350, 690, 780, 1410, 1645, 1757
PpuMI	RGGWCCY	1 cut(s)	1980
Psp124BI	GAGCTC	3 cut(s)	513, 663, 1887
Psp1406I	AACGTT	1 cut(s)	1092
Psp5II	RGGWCCY	1 cut(s)	1980
Psp6I	CCWGG	8 cut(s)	9, 185, 223, 349, 400, 427, 1149, 1834
PspEI	GGTNACC	1 cut(s)	542
PspFI	CCCAGC	1 cut(s)	832
PspGI	CCWGG	8 cut(s)	9, 185, 223, 349, 400, 427, 1149, 1834
PspLI	CGTACG	1 cut(s)	1332
PspOMI	GGGCCC	1 cut(s)	194
PspPPI	RGGWCCY	1 cut(s)	1980
PspXI	VCTCGAGB	1 cut(s)	339
PsuI	RGATCY	3 cut(s)	263, 882, 930
PsyI	GACNNNGTC	1 cut(s)	1457
PvuII	CAGCTG	1 cut(s)	1958
RsaI	GTAC	7 cut(s)	99, 411, 1241, 1316, 1334, 1700, 2370
RsaNI	GTAC	7 cut(s)	98, 410, 1240, 1315, 1333, 1699, 2369
SacI	GAGCTC	3 cut(s)	513, 663, 1887
SalI	GTCGAC	1 cut(s)	889
SaqAI	TTAA	5 cut(s)	2172, 2309, 2337, 2417, 2475
ScaI	AGTACT	2 cut(s)	1241, 1700
SchI	GAGTC	7 cut(s)	206, 351, 691, 780, 1410, 1646, 1758
SduI	GDGCHC	9 cut(s)	198, 286, 328, 513, 663, 961, 1150, 1881, 1887
SfaNI	GCATC	3 cut(s)	541, 1198, 1857
SfcI	CTRYAG	1 cut(s)	1045
SfoI	GGCGCC	2 cut(s)	39, 356
Sfr274I	CTCGAG	2 cut(s)	339, 644
SfuI	TTCGAA	1 cut(s)	1433
SgrAI	CRCCGGYG	2 cut(s)	103, 206
SgrDI	CGTCGACG	1 cut(s)	889
SinI	GGWCC	6 cut(s)	147, 376, 431, 1107, 1802, 1980
SlaI	CTCGAG	2 cut(s)	339, 644
SmlI	CTYRAG	4 cut(s)	327, 339, 644, 728
SmoI	CTYRAG	4 cut(s)	327, 339, 644, 728
SspDI	GGCGCC	2 cut(s)	37, 354
SspI	AATATT	1 cut(s)	2297
SspMI	CTAG	1 cut(s)	1641
SstI	GAGCTC	3 cut(s)	513, 663, 1887
StyI	CCWWGG	1 cut(s)	2044
TaaI	ACNGT	6 cut(s)	634, 1356, 1408, 1604, 2133, 2428
TaiI	ACGT	5 cut(s)	764, 896, 1095, 1334, 1857
TaqII	GACCGA	1 cut(s)	1027
TatI	WGTACW	2 cut(s)	1239, 1698
TfiI	GAWTC	5 cut(s)	177, 1477, 1543, 2093, 2233
Tru1I	TTAA	5 cut(s)	2172, 2309, 2337, 2417, 2475
Tru9I	TTAA	5 cut(s)	2172, 2309, 2337, 2417, 2475
TscAI	CASTG	5 cut(s)	1201, 1609, 1824, 2138, 2433
TseFI	GTSAC	4 cut(s)	1202, 1598, 1819, 2005
Tsp45I	GTSAC	4 cut(s)	1202, 1598, 1819, 2005
TspDTI	ATGAA	5 cut(s)	857, 980, 1234, 1615, 2051
TspGWI	ACGGA	4 cut(s)	462, 1099, 1117, 1274
TspRI	CASTG	5 cut(s)	1201, 1609, 1824, 2138, 2433
Tth111I	GACNNNGTC	1 cut(s)	1457
VpaK11BI	GGWCC	6 cut(s)	147, 376, 431, 1107, 1802, 1980
XapI	RAATTY	3 cut(s)	2175, 2437, 2443
XceI	RCATGY	2 cut(s)	1996, 2407
XhoI	CTCGAG	2 cut(s)	339, 644
XmiI	GTMKAC	1 cut(s)	890
XmnI	GAANNNNTTC	2 cut(s)	945, 2447
XspI	CTAG	1 cut(s)	1641
ZraI	GACGTC	2 cut(s)	762, 1855
ZrmI	AGTACT	2 cut(s)	1241, 1700

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.