Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0012001

Physical Location & Seq

Genomic Coordinates Reverse (-)

25040157 .. 25043467

Gene Structure 3311 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ24057

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2172 bp

ATGCCGGCCCTGGCTTGTTGCGTGGACGCTGCAGTGGCTCCTCCCGGCTACGCCTTTGCCGGGGATAGCTCTCTTCCTGCGCCGGTCCCATTTTCCGGCGTATTTCCGACCACCGCCAACACCACCGCCTCCGCAGCCGCCGCTGCTTGGTCTCCCTCCCTATCCAACGAGCTCTACCGAATCGATGCCTGGGGAGGGCCGTACTTCACGGTCAATTCCTCCGGCAACGTCTCCGTCCGGCCTTACGGCTCCGGGACCATGCCCCACCAGGAGATAGATTTGCTGAAAATAGTAAAGAAGGTTTCGGATCCGAAATCCGAATCCGGGCTCGGGTTGCAGCTCCCTCTCATTGTTCGCTTTCCCGACGTCCTTAAGAACCGGCTCGAATCTCTCCAGGGAGCCTTCGATTTCGCGATCCAGTCCCAGGACTACGGGTCCCACTACCAGGGCGTGTACCCGGTGAAATGCAACCAGGACCGGTTCGTCGTGGAGGACATTGTCCGGTTCGGGAAGCCGTTCCGGTTCGGACTCGAAGCCGGGTCGAAGCCCGAGCTCCTCATGGCCATGAGCTGCCTGTGCAAAGGTAACCCAGAATCCCTCCTGGTCTGCAATGGATTCAAGGACTTTGAGTACATCTCGCTGGCTCTGATGGCGAGGAAGCTGGATTTGAACACCGTGATTGTTCTCGAGCAAGAGGAAGAGCTGGATTTGGTGATTCAATTGAGCAAGAAGCTCGGCGTCCGTCCCGTGATTGGCGCGCGTGCGAAGCTCAGAACCAAGCATTCCGGCCATTTCGGGTCGACTTCCGGCGAGAAAGGGAAGTTCGGGTTAACCACCACTCAGATTTTGCGGGTGGTGAAGAAGCTTGAGCAAGTAGGTATGCTTGATTGCTTTCAGTTGCTGCATTTTCATATTGGGTCTCAGATCCCTACGACTGCTCTGCTCGCTGATGGTGTATGCGAGGCGGCGCAGATCTATTGCGAATTGGTCCGCCTCGGTGCCCATATGAAGGTCATAGACATTGGAGGTGGTTTGGGGATAGACTATGATGGATCCAAATCCAGCGACTCTGAGATTTCTGTTGGCTATGGGATTGAGGAGTATGCAATGGCTGTTGTTCGAGCAGTCCGGTGTGTTTGTGACCGGAGGTCGGTGAAGCACCCTGTGATTTGCAGCGAGAGCGGCAGAGCCATTGTGTCTCATCACTCAGTTCTGATTTTTGAGGCTGTTTCTGCTAGTGCTTGTGATGTTGCTCCTTCCATGTCTGCCTATGCGCTTCAGTATTTCATTGAGGGACTTACAGAAGAAGCTCGTGCTGATTACCGGAACCTTTCGGCTGCGGCAATCAGGGGCGAGTATGAAGCTTGTTTGACATATGCTGATCTGCTGAAGCAGCGCTGTGTTGATCAATTCAAAGAAGGGTCTCTGGGTATTGAACAATTAGCCACTGTGGATGGGCTTTGTGATTTGGTCTCGAAAGCAATTGGAGCGTCCGATCCAGTTCGTACATACAATGTCAACCTCTCGGTTTTCACTTCCATTCCCGACTTCTGGGGCATTGGGCAGCTTTTCCCTATTGTCCCAATTCACCGGCTCGATCAACGGCCGGCGGTGAGAGGTGTGTTATCGGACTTGACCTGTGATAGTGATGGGAAGATCAATAAGTTCATTGGCGGCGAGTCCAGCCTGCCGCTTCATGAAATGGAAGGCAATGGCTCTGGTGGGCGGTACTATTTGGGAATGTTCTTGGGCGGGGCCTATGAGGAGGCACTCGGAGGAGTGCACAACCTGTTTGGAGGCCCGAGCGTTGTTCGGGTCTCCCAGAGCGACGGTCCATACAGCTTTGCGGTTACGCGGGCTGTGCCTGGGCCGTCTTGCGCAGACGTCCTCCGTTTGATGCAGCACGAGCCCGAGCTCATGTTCGAGACGCTCAAACACCGTGCAGAGGAGTGTGGTGAGGTCGACAAAGATGGAATGGCGAATTCGGCTTTGGCCACCAGCCTAGCACGCTCCTTCCACAACATGCCGTATCTGTCTGTAGCTTCGTCTTGTTGCCTGACTGCAATGAACAACCATGGTTTGTACTATTGCAGTGAGGATGATTATGACATTGTTGCTGATTCTGGTGCTCCTAATGCTGGTGAGGAGGACTGGTCATATTGCTGTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006576 GO:0006595 GO:0006596 GO:0006807 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0008792 GO:0009058 GO:0009266 GO:0009308 GO:0009309 GO:0009409 GO:0009445 GO:0009446 GO:0009507 GO:0009536 GO:0009611 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009753 GO:0009987 GO:0010033 GO:0016829 GO:0016830 GO:0016831 GO:0033993 GO:0034641 GO:0042221 GO:0042401 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044106 GO:0044237 GO:0044249 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046983 GO:0050896 GO:0071704 GO:0080167 GO:0097164 GO:0097305 GO:1901564 GO:1901566 GO:1901576 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00330 ko01100 map00330 map01100

Pfam Domains

Protein Families

Orn_Arg_deC_N

Protein Analysis

723

Amino Acids

77.95

Weight (kDa)

5.23

Isoelectric Point (pI)

43.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Orn_Arg_deC_N	PF02784	147 - 400	2.9e-34	Pyridoxal-dependent decarboxylase, pyridoxal binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012001)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16500 AT4G34710 AT4G34710
fragaria_vesca	FvH4_2g10570
malus_domestica	MD05G1055300.v1.1 MD10G1062500.v1.1
prunus_persica	Prupe.8G083100_v2.0.a1
pyrus_communis	pycom05g04560 pycom10g04830
rosa_chinensis	RchiOBHm_Chr6g0268211
rosa_laevigata	RLG00000013925
rosa_multiflora	Rmu_sc0009095.1_g000007
rosa_roxburghii	Rroxscaffold_7G00199960
rosa_rugosa	Rorug06G0039700.1
rosa_samantha	Rh6AG159800 Rh6BG163700 Rh6CG154300 Rh6DG149600
rosa_wichuraiana	Rw6G013820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	482
AatII	GACGTC	2 cut(s)	369, 1887
Acc16I	TGCGCA	1 cut(s)	1879
AccB1I	GGYRCC	1 cut(s)	998
AccBSI	CCGCTC	1 cut(s)	1182
AccI	GTMKAC	2 cut(s)	800, 1962
AccII	CGCG	4 cut(s)	413, 758, 760, 1855
AclWI	GGATC	7 cut(s)	302, 315, 409, 919, 1047, 1060, 1490
AcoI	YGGCCR	4 cut(s)	561, 787, 1604, 1992
AcsI	RAATTY	1 cut(s)	1981
AcuI	CTGAAG	2 cut(s)	1262, 1409
AcyI	GRCGYC	3 cut(s)	366, 738, 1884
AdeI	CACNNNGTG	1 cut(s)	1165
AfaI	GTAC	6 cut(s)	203, 455, 632, 1507, 1730, 2084
AfeI	AGCGCT	1 cut(s)	1397
AflII	CTTAAG	1 cut(s)	371
AgeI	ACCGGT	1 cut(s)	477
AgsI	TTSAA	5 cut(s)	619, 670, 719, 1414, 1436
AhdI	GACNNNNNGTC	2 cut(s)	433, 1147
AjnI	CCWGG	9 cut(s)	9, 188, 267, 393, 423, 444, 471, 600, 1864
AjuI	GAANNNNNNNTTGG	2 cut(s)	1973, 2005
Alw21I	GWGCWC	5 cut(s)	174, 555, 1785, 1917, 2131
Alw26I	GTCTC	8 cut(s)	156, 235, 924, 1203, 1428, 1477, 1822, 1919
Alw44I	GTGCAC	1 cut(s)	1781
AlwI	GGATC	7 cut(s)	302, 315, 409, 919, 1047, 1060, 1490
AlwNI	CAGNNNCTG	1 cut(s)	901
Ama87I	CYCGRG	5 cut(s)	329, 548, 686, 1801, 1910
Aor51HI	AGCGCT	1 cut(s)	1397
ApaLI	GTGCAC	1 cut(s)	1781
ApoI	RAATTY	1 cut(s)	1981
AsiGI	ACCGGT	1 cut(s)	477
Asp700I	GAANNNNTTC	1 cut(s)	515
AspLEI	GCGC	7 cut(s)	82, 758, 760, 970, 1276, 1398, 1880
AsuC2I	CCSGG	6 cut(s)	45, 61, 253, 325, 458, 538
AsuHPI	GGTGA	8 cut(s)	472, 724, 868, 1165, 1580, 1624, 1967, 2153
AvaI	CYCGRG	5 cut(s)	329, 548, 686, 1801, 1910
AvaII	GGWCC	6 cut(s)	85, 255, 435, 475, 988, 1832
BaeGI	GKGCMC	2 cut(s)	1003, 1785
BalI	TGGCCA	2 cut(s)	563, 1994
BamHI	GGATCC	2 cut(s)	307, 1052
BanI	GGYRCC	1 cut(s)	998
BanII	GRGCYC	5 cut(s)	174, 330, 555, 1911, 1917
BauI	CACGAG	2 cut(s)	1311, 1904
Bbv12I	GWGCWC	5 cut(s)	174, 555, 1785, 1917, 2131
BccI	CCATC	6 cut(s)	643, 944, 1043, 1448, 1643, 1964
BceAI	ACGGC	6 cut(s)	184, 262, 499, 1619, 1855, 2011
BcgI	CGANNNNNNTGC	4 cut(s)	715, 749, 922, 956
BciT130I	CCWGG	9 cut(s)	11, 190, 269, 395, 425, 446, 473, 602, 1866
BclI	TGATCA	1 cut(s)	1405
BcnI	CCSGG	6 cut(s)	45, 61, 253, 325, 458, 538
BcoDI	GTCTC	8 cut(s)	156, 235, 924, 1203, 1428, 1477, 1822, 1919
BfaI	CTAG	2 cut(s)	1236, 2003
BfmI	CTRYAG	2 cut(s)	30, 2037
BfoI	RGCGCY	1 cut(s)	1399
BfrI	CTTAAG	1 cut(s)	371
BglII	AGATCT	1 cut(s)	972
Bme18I	GGWCC	6 cut(s)	85, 255, 435, 475, 988, 1832
BmeRI	GACNNNNNGTC	2 cut(s)	433, 1147
BmeT110I	CYCGRG	5 cut(s)	329, 548, 686, 1801, 1910
BmsI	GCATC	2 cut(s)	175, 1887
BplI	GAGNNNNNCTC	2 cut(s)	620, 652
BpmI	CTGGAG	1 cut(s)	377
BpuEI	CTTGAG	1 cut(s)	887
BpuMI	CCSGG	6 cut(s)	45, 61, 253, 325, 458, 538
Bsa29I	ATCGAT	1 cut(s)	183
BsaBI	GATNNNNATC	1 cut(s)	1057
BsaHI	GRCGYC	3 cut(s)	366, 738, 1884
BsaI	GGTCTC	5 cut(s)	156, 924, 1428, 1477, 1822
BsaJI	CCNNGG	9 cut(s)	9, 60, 189, 394, 423, 445, 994, 1865, 2074
BsaWI	WCCGGW	6 cut(s)	477, 501, 519, 1128, 1143, 1323
BsaXI	ACNNNNNCTCC	2 cut(s)	2138, 2168
Bse118I	RCCGGY	6 cut(s)	4, 82, 378, 477, 1590, 1606
Bse1I	ACTGG	3 cut(s)	418, 1499, 2156
Bse3DI	GCAATG	4 cut(s)	616, 1113, 1717, 2070
Bse8I	GATNNNNATC	1 cut(s)	1057
BseBI	CCWGG	9 cut(s)	11, 190, 269, 395, 425, 446, 473, 602, 1866
BseCI	ATCGAT	1 cut(s)	183
BseDI	CCNNGG	9 cut(s)	9, 60, 189, 394, 423, 445, 994, 1865, 2074
BseGI	GGATG	2 cut(s)	1459, 2104
BseJI	GATNNNNATC	1 cut(s)	1057
BseMI	GCAATG	4 cut(s)	616, 1113, 1717, 2070
BseMII	CTCAG	5 cut(s)	784, 854, 935, 1062, 1221
BseNI	ACTGG	3 cut(s)	418, 1499, 2156
BsePI	GCGCGC	1 cut(s)	756
BseRI	GAGGAG	7 cut(s)	30, 545, 1112, 1778, 1791, 1961, 2159
BseSI	GKGCMC	2 cut(s)	1003, 1785
BseX3I	CGGCCG	1 cut(s)	1604
BsgI	GTGCAG	1 cut(s)	1962
Bsh1236I	CGCG	4 cut(s)	413, 758, 760, 1855
Bsh1285I	CGRYCG	1 cut(s)	1607
BshNI	GGYRCC	1 cut(s)	998
BshTI	ACCGGT	1 cut(s)	477
BshVI	ATCGAT	1 cut(s)	183
BsiEI	CGRYCG	1 cut(s)	1607
BsiHKAI	GWGCWC	5 cut(s)	174, 555, 1785, 1917, 2131
BsiHKCI	CYCGRG	5 cut(s)	329, 548, 686, 1801, 1910
BslFI	GGGAC	7 cut(s)	71, 268, 406, 421, 729, 1308, 1565
BsmAI	GTCTC	8 cut(s)	156, 235, 924, 1203, 1428, 1477, 1822, 1919
BsmBI	CGTCTC	2 cut(s)	235, 1919
BsmFI	GGGAC	7 cut(s)	71, 268, 406, 421, 729, 1308, 1565
BsmI	GAATGC	1 cut(s)	781
Bso31I	GGTCTC	5 cut(s)	156, 924, 1428, 1477, 1822
BsoBI	CYCGRG	5 cut(s)	329, 548, 686, 1801, 1910
Bsp1286I	GDGCHC	8 cut(s)	174, 330, 555, 1003, 1785, 1911, 1917, 2131
Bsp19I	CCATGG	1 cut(s)	2074
Bsp68I	TCGCGA	1 cut(s)	413
BspCNI	CTCAG	5 cut(s)	783, 853, 934, 1063, 1220
BspDI	ATCGAT	1 cut(s)	183
BspFNI	CGCG	4 cut(s)	413, 758, 760, 1855
BspHI	TCATGA	1 cut(s)	1696
BspMAI	CTGCAG	1 cut(s)	34
BspPI	GGATC	7 cut(s)	302, 315, 409, 919, 1047, 1060, 1490
BspQI	GCTCTTC	1 cut(s)	693
BspT107I	GGYRCC	1 cut(s)	998
BspTI	CTTAAG	1 cut(s)	371
BspTNI	GGTCTC	5 cut(s)	156, 924, 1428, 1477, 1822
BsrBI	CCGCTC	1 cut(s)	1182
BsrDI	GCAATG	4 cut(s)	616, 1113, 1717, 2070
BsrFI	RCCGGY	6 cut(s)	4, 82, 378, 477, 1590, 1606
BsrI	ACTGG	3 cut(s)	418, 1499, 2156
BssAI	RCCGGY	6 cut(s)	4, 82, 378, 477, 1590, 1606
BssECI	CCNNGG	9 cut(s)	9, 60, 189, 394, 423, 445, 994, 1865, 2074
BssHII	GCGCGC	1 cut(s)	756
BssNI	GRCGYC	3 cut(s)	366, 738, 1884
BssSI	CACGAG	2 cut(s)	1311, 1904
BssT1I	CCWWGG	1 cut(s)	2074
Bst2BI	CACGAG	2 cut(s)	1311, 1904
Bst2UI	CCWGG	9 cut(s)	11, 190, 269, 395, 425, 446, 473, 602, 1866
Bst4CI	ACNGT	5 cut(s)	211, 676, 1450, 1832, 1940
Bst6I	CTCTTC	2 cut(s)	78, 693
BstACI	GRCGYC	3 cut(s)	366, 738, 1884
BstAFI	CTTAAG	1 cut(s)	371
BstC8I	GCNNGC	9 cut(s)	6, 642, 758, 762, 945, 1608, 1688, 1857, 2008
BstDEI	CTNAG	5 cut(s)	770, 840, 921, 1071, 1207
BstDSI	CCRYGG	1 cut(s)	2074
BstEII	GGTNACC	1 cut(s)	584
BstF5I	GGATG	2 cut(s)	1459, 2104
BstFNI	CGCG	4 cut(s)	413, 758, 760, 1855
BstH2I	RGCGCY	1 cut(s)	1399
BstHHI	GCGC	7 cut(s)	82, 758, 760, 970, 1276, 1398, 1880
BstMAI	GTCTC	8 cut(s)	156, 235, 924, 1203, 1428, 1477, 1822, 1919
BstMCI	CGRYCG	1 cut(s)	1607
BstNI	CCWGG	9 cut(s)	11, 190, 269, 395, 425, 446, 473, 602, 1866
BstNSI	RCATGY	1 cut(s)	2026
BstPI	GGTNACC	1 cut(s)	584
BstSFI	CTRYAG	2 cut(s)	30, 2037
BstSLI	GKGCMC	2 cut(s)	1003, 1785
BstUI	CGCG	4 cut(s)	413, 758, 760, 1855
BstX2I	RGATCY	4 cut(s)	307, 924, 972, 1052
BstYI	RGATCY	4 cut(s)	307, 924, 972, 1052
BstZI	CGGCCG	1 cut(s)	1604
Bsu15I	ATCGAT	1 cut(s)	183
BsuTUI	ATCGAT	1 cut(s)	183
BtgI	CCRYGG	1 cut(s)	2074
BtsCI	GGATG	2 cut(s)	1459, 2104
BtsI	GCAGTG	2 cut(s)	39, 2098
BtsIMutI	CAGTG	3 cut(s)	39, 1446, 2098
BtuMI	TCGCGA	1 cut(s)	413
Cac8I	GCNNGC	9 cut(s)	6, 642, 758, 762, 945, 1608, 1688, 1857, 2008
CaiI	CAGNNNCTG	1 cut(s)	901
CciI	TCATGA	1 cut(s)	1696
CfoI	GCGC	7 cut(s)	82, 758, 760, 970, 1276, 1398, 1880
Cfr10I	RCCGGY	6 cut(s)	4, 82, 378, 477, 1590, 1606
ClaI	ATCGAT	1 cut(s)	183
CseI	GACGC	4 cut(s)	35, 727, 1479, 1936
Csp6I	GTAC	6 cut(s)	202, 454, 631, 1506, 1729, 2083
CspAI	ACCGGT	1 cut(s)	477
CviAII	CATG	8 cut(s)	259, 559, 565, 1261, 1697, 1918, 2023, 2075
CviQI	GTAC	6 cut(s)	202, 454, 631, 1506, 1729, 2083
DdeI	CTNAG	5 cut(s)	770, 840, 921, 1071, 1207
DraIII	CACNNNGTG	1 cut(s)	1165
DrdI	GACNNNNNNGTC	1 cut(s)	482
DriI	GACNNNNNGTC	2 cut(s)	433, 1147
DseDI	GACNNNNNNGTC	1 cut(s)	482
EaeI	YGGCCR	4 cut(s)	561, 787, 1604, 1992
EagI	CGGCCG	1 cut(s)	1604
Eam1104I	CTCTTC	2 cut(s)	78, 693
Eam1105I	GACNNNNNGTC	2 cut(s)	433, 1147
EarI	CTCTTC	2 cut(s)	78, 693
EciI	GGCGGA	1 cut(s)	980
Ecl136II	GAGCTC	3 cut(s)	172, 553, 1915
EclXI	CGGCCG	1 cut(s)	1604
Eco130I	CCWWGG	1 cut(s)	2074
Eco24I	GRGCYC	5 cut(s)	174, 330, 555, 1911, 1917
Eco31I	GGTCTC	5 cut(s)	156, 924, 1428, 1477, 1822
Eco47I	GGWCC	6 cut(s)	85, 255, 435, 475, 988, 1832
Eco47III	AGCGCT	1 cut(s)	1397
Eco52I	CGGCCG	1 cut(s)	1604
Eco53kI	GAGCTC	3 cut(s)	172, 553, 1915
Eco57I	CTGAAG	2 cut(s)	1262, 1409
Eco88I	CYCGRG	5 cut(s)	329, 548, 686, 1801, 1910
Eco91I	GGTNACC	1 cut(s)	584
EcoICRI	GAGCTC	3 cut(s)	172, 553, 1915
EcoO109I	RGGNCCY	2 cut(s)	435, 1755
EcoO65I	GGTNACC	1 cut(s)	584
EcoRI	GAATTC	1 cut(s)	1981
EcoRII	CCWGG	9 cut(s)	9, 188, 267, 393, 423, 444, 471, 600, 1864
EcoT14I	CCWWGG	1 cut(s)	2074
EcoT38I	GRGCYC	5 cut(s)	174, 330, 555, 1911, 1917
ErhI	CCWWGG	1 cut(s)	2074
Esp3I	CGTCTC	2 cut(s)	235, 1919
FaeI	CATG	8 cut(s)	262, 562, 568, 1264, 1700, 1921, 2026, 2078
FaqI	GGGAC	7 cut(s)	71, 268, 406, 421, 729, 1308, 1565
FatI	CATG	8 cut(s)	258, 558, 564, 1260, 1696, 1917, 2022, 2074
FauI	CCCGC	3 cut(s)	843, 1745, 1848
FauNDI	CATATG	2 cut(s)	1005, 1375
FbaI	TGATCA	1 cut(s)	1405
FblI	GTMKAC	2 cut(s)	800, 1962
FokI	GGATG	2 cut(s)	1466, 2111
FriOI	GRGCYC	5 cut(s)	174, 330, 555, 1911, 1917
FspBI	CTAG	2 cut(s)	1236, 2003
FspI	TGCGCA	1 cut(s)	1879
GlaI	GCGC	7 cut(s)	81, 757, 759, 969, 1275, 1397, 1879
GsuI	CTGGAG	1 cut(s)	377
HaeII	RGCGCY	1 cut(s)	1399
HgaI	GACGC	4 cut(s)	35, 727, 1479, 1936
HhaI	GCGC	7 cut(s)	82, 758, 760, 970, 1276, 1398, 1880
Hin1I	GRCGYC	3 cut(s)	366, 738, 1884
Hin1II	CATG	8 cut(s)	262, 562, 568, 1264, 1700, 1921, 2026, 2078
Hin6I	GCGC	7 cut(s)	80, 756, 758, 968, 1274, 1396, 1878
HinP1I	GCGC	7 cut(s)	80, 756, 758, 968, 1274, 1396, 1878
HincII	GTYRAC	4 cut(s)	801, 831, 1519, 1963
HindII	GTYRAC	4 cut(s)	801, 831, 1519, 1963
HindIII	AAGCTT	2 cut(s)	863, 1362
HpaI	GTTAAC	1 cut(s)	831
HphI	GGTGA	8 cut(s)	472, 724, 868, 1165, 1580, 1624, 1967, 2153
Hpy166II	GTNNAC	7 cut(s)	25, 454, 801, 831, 1519, 1783, 1963
Hpy188III	TCNNGA	8 cut(s)	362, 412, 508, 686, 1474, 1544, 1697, 1924
Hpy8I	GTNNAC	7 cut(s)	25, 454, 801, 831, 1519, 1783, 1963
Hpy99I	CGWCG	3 cut(s)	368, 488, 1832
HpyAV	CCTTC	7 cut(s)	292, 412, 1003, 1266, 1412, 1700, 2023
HpyCH4III	ACNGT	5 cut(s)	211, 676, 1450, 1832, 1940
HpyCH4IV	ACGT	3 cut(s)	228, 366, 1884
HpyF3I	CTNAG	5 cut(s)	770, 840, 921, 1071, 1207
HpySE526I	ACGT	3 cut(s)	228, 366, 1884
Hsp92I	GRCGYC	3 cut(s)	366, 738, 1884
Hsp92II	CATG	8 cut(s)	262, 562, 568, 1264, 1700, 1921, 2026, 2078
HspAI	GCGC	7 cut(s)	80, 756, 758, 968, 1274, 1396, 1878
KflI	GGGWCCC	1 cut(s)	435
KroI	GCCGGC	2 cut(s)	4, 1606
KroNI	GCCGGC	2 cut(s)	6, 1608
Ksp22I	TGATCA	1 cut(s)	1405
KspAI	GTTAAC	1 cut(s)	831
LguI	GCTCTTC	1 cut(s)	693
LmnI	GCTCC	9 cut(s)	43, 254, 345, 398, 558, 1258, 1487, 2015, 2134
LweI	GCATC	2 cut(s)	175, 1887
MaeI	CTAG	2 cut(s)	1236, 2003
MaeII	ACGT	3 cut(s)	228, 366, 1884
MaeIII	GTNAC	3 cut(s)	584, 1139, 1849
MbiI	CCGCTC	1 cut(s)	1182
MboII	GAAGA	5 cut(s)	65, 710, 871, 1316, 1666
MfeI	CAATTG	2 cut(s)	719, 1482
MflI	RGATCY	4 cut(s)	307, 924, 972, 1052
MhlI	GDGCHC	8 cut(s)	174, 330, 555, 1003, 1785, 1911, 1917, 2131
MlsI	TGGCCA	2 cut(s)	563, 1994
MluCI	AATT	8 cut(s)	214, 719, 983, 1409, 1439, 1482, 1584, 1981
MluNI	TGGCCA	2 cut(s)	563, 1994
MlyI	GAGTC	3 cut(s)	522, 1061, 1688
MmeI	TCCRAC	2 cut(s)	131, 189
Mox20I	TGGCCA	2 cut(s)	563, 1994
MroNI	GCCGGC	2 cut(s)	4, 1606
MroXI	GAANNNNTTC	1 cut(s)	515
MscI	TGGCCA	2 cut(s)	563, 1994
MseI	TTAA	2 cut(s)	372, 830
MslI	CAYNNNNRTG	1 cut(s)	563
Msp20I	TGGCCA	2 cut(s)	563, 1994
MspA1I	CMGCKG	1 cut(s)	143
MspCI	CTTAAG	1 cut(s)	371
MunI	CAATTG	2 cut(s)	719, 1482
Mva1269I	GAATGC	1 cut(s)	781
MvaI	CCWGG	9 cut(s)	11, 190, 269, 395, 425, 446, 473, 602, 1866
MvnI	CGCG	4 cut(s)	413, 758, 760, 1855
NaeI	GCCGGC	2 cut(s)	6, 1608
NciI	CCSGG	6 cut(s)	45, 61, 253, 325, 458, 538
NcoI	CCATGG	1 cut(s)	2074
NdeI	CATATG	2 cut(s)	1005, 1375
NgoMIV	GCCGGC	2 cut(s)	4, 1606
NlaIII	CATG	8 cut(s)	262, 562, 568, 1264, 1700, 1921, 2026, 2078
NmeAIII	GCCGAG	1 cut(s)	714
NmuCI	GTSAC	1 cut(s)	1139
NruI	TCGCGA	1 cut(s)	413
NsbI	TGCGCA	1 cut(s)	1879
NspI	RCATGY	1 cut(s)	2026
PaeR7I	CTCGAG	1 cut(s)	686
PagI	TCATGA	1 cut(s)	1696
PauI	GCGCGC	1 cut(s)	756
PciSI	GCTCTTC	1 cut(s)	693
PctI	GAATGC	1 cut(s)	781
PdiI	GCCGGC	2 cut(s)	6, 1608
PdmI	GAANNNNTTC	1 cut(s)	515
PfeI	GAWTC	7 cut(s)	180, 320, 386, 593, 615, 715, 2120
PflFI	GACNNNGTC	1 cut(s)	497
PfoI	TCCNGGA	1 cut(s)	251
PinAI	ACCGGT	1 cut(s)	477
PleI	GAGTC	3 cut(s)	522, 1061, 1687
PpsI	GAGTC	3 cut(s)	522, 1061, 1687
PpuMI	RGGWCCY	1 cut(s)	435
Psp124BI	GAGCTC	3 cut(s)	174, 555, 1917
Psp5II	RGGWCCY	1 cut(s)	435
Psp6I	CCWGG	9 cut(s)	9, 188, 267, 393, 423, 444, 471, 600, 1864
PspEI	GGTNACC	1 cut(s)	584
PspGI	CCWGG	9 cut(s)	9, 188, 267, 393, 423, 444, 471, 600, 1864
PspPPI	RGGWCCY	1 cut(s)	435
PstI	CTGCAG	1 cut(s)	34
PstNI	CAGNNNCTG	1 cut(s)	901
PsuI	RGATCY	4 cut(s)	307, 924, 972, 1052
PsyI	GACNNNGTC	1 cut(s)	497
PteI	GCGCGC	1 cut(s)	756
RruI	TCGCGA	1 cut(s)	413
RsaI	GTAC	6 cut(s)	203, 455, 632, 1507, 1730, 2084
RsaNI	GTAC	6 cut(s)	202, 454, 631, 1506, 1729, 2083
RseI	CAYNNNNRTG	1 cut(s)	563
SacI	GAGCTC	3 cut(s)	174, 555, 1917
SalI	GTCGAC	2 cut(s)	799, 1961
SapI	GCTCTTC	1 cut(s)	693
SaqAI	TTAA	2 cut(s)	372, 830
SchI	GAGTC	3 cut(s)	522, 1061, 1688
SduI	GDGCHC	8 cut(s)	174, 330, 555, 1003, 1785, 1911, 1917, 2131
SfaNI	GCATC	2 cut(s)	175, 1887
SfcI	CTRYAG	2 cut(s)	30, 2037
Sfr274I	CTCGAG	1 cut(s)	686
SinI	GGWCC	6 cut(s)	85, 255, 435, 475, 988, 1832
SlaI	CTCGAG	1 cut(s)	686
SmiMI	CAYNNNNRTG	1 cut(s)	563
SmlI	CTYRAG	3 cut(s)	371, 686, 866
SmoI	CTYRAG	3 cut(s)	371, 686, 866
Sse9I	AATT	8 cut(s)	214, 719, 983, 1409, 1439, 1482, 1584, 1981
SspMI	CTAG	2 cut(s)	1236, 2003
SstI	GAGCTC	3 cut(s)	174, 555, 1917
StyI	CCWWGG	1 cut(s)	2074
TaaI	ACNGT	5 cut(s)	211, 676, 1450, 1832, 1940
TaiI	ACGT	3 cut(s)	231, 369, 1887
TasI	AATT	8 cut(s)	214, 719, 983, 1409, 1439, 1482, 1584, 1981
TatI	WGTACW	2 cut(s)	630, 2082
TauI	GCSGC	7 cut(s)	140, 143, 968, 1185, 1343, 1677, 1693
TfiI	GAWTC	7 cut(s)	180, 320, 386, 593, 615, 715, 2120
Tru1I	TTAA	2 cut(s)	372, 830
Tru9I	TTAA	2 cut(s)	372, 830
TscAI	CASTG	3 cut(s)	39, 1453, 2098
TseFI	GTSAC	1 cut(s)	1139
Tsp45I	GTSAC	1 cut(s)	1139
TspDTI	ATGAA	8 cut(s)	899, 1022, 1276, 1374, 1657, 1685, 1713, 2081
TspGWI	ACGGA	3 cut(s)	223, 731, 1880
TspRI	CASTG	3 cut(s)	39, 1453, 2098
Tth111I	GACNNNGTC	1 cut(s)	497
Vha464I	CTTAAG	1 cut(s)	371
VneI	GTGCAC	1 cut(s)	1781
VpaK11BI	GGWCC	6 cut(s)	85, 255, 435, 475, 988, 1832
XapI	RAATTY	1 cut(s)	1981
XceI	RCATGY	1 cut(s)	2026
XhoI	CTCGAG	1 cut(s)	686
XmiI	GTMKAC	2 cut(s)	800, 1962
XmnI	GAANNNNTTC	1 cut(s)	515
XspI	CTAG	2 cut(s)	1236, 2003
ZraI	GACGTC	2 cut(s)	367, 1885

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.