Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0012001

Physical Location & Seq

Genomic Coordinates Reverse (-)

25568215 .. 25570379

Gene Structure 2165 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G013820.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2127 bp

ATGCCGGCCCTGGCTTGTTGCGTGGACGCTGCAGTGGCTCCTCCCGGCTACGCCTTTGCCGGGGATAGCTCTCTTCCTGCGCCGGTCCCATTTTCCGGCGTATTTCCGGCCACCGCCAACACCACTGCCTCCGCAGCCGCCTGGTCTCCCTCCCTATCCAACGAGCTCTACCGAATCGATGCCTGGGGCGGGCCGTACTTCACGGTCAATTCCTCCGGCAACGTCTCCGTCCGGCCTTACGGCTCCGGGACCATGCCCCACCAGGAGATAGATTTGCTGAAAATAGTGAAGAAGCTCCCTCTCATTGTTCGCTTTCCCGACGTCCTTAAGAACCGGCTCGAATCTCTCCAGGGAGCCTTCGATTTCGCGATCCAGTCCCAGGACTACGGGTCCCACTACCAGGGCGTGTACCCGGTGAAATGCAACCAGGACCGGTTCGTCGTGGAGGACATTGTCCGGTTCGGGAAGCCGTTCCGGTTCGGACTCGAAGCCGGGTCGAAGCCCGAGCTCCTCATGGCCATGAGCTGCCTGTGCAAAGGTAACCCAGAATCCCTCCTGGTCTGTAATGGATTCAAGGACTTTGAGTACATCTCGCTTGCTCTGATGGCGAGGAAGCTGGACTTGAACGCCGTGATTGTTCTCGAGCAAGAGGAAGAGCTGGATTTGGTGATTCAATTGAGCAAGAAGCTCGGCGTCCGTCCCGTGATTGGCGCGCGTGCGAAGCTCAGAACCAAGCATTCCGGCCATTTCGGGTCGACTTCCGGCGAGAAAGGGAAGTTCGGGTTAACCACCATCCAGATTTTGCGGGTGGTGAAGAAGCTGGAGCAAGTAGGTATGCTTGATTGCTTTCAGTTGCTGCATTTTCATATTGGGTCTCAGATCCCTACGACTGCTCTGCTCGCTGATGGTGTATCCGAGGCGGCGCAGATCTATTGCGAATTGGTCCGCCTCGGTGCCCATATGAAGGTCATAGACATTGGAGGTGGTTTGGGGATAGATTATGATGGATCCAAATCCAGCGACTCTGAGATTTCTGTTGGCTATGGGCTTGAGGAGTATGCAATGGCTGTTGTTGGAGCAGTCCGGTATGTTTGTGACCGGAGGTCAGTGAAGCACCCTGTGATTTGCAGCGAGAGCGGCAGAGCCATTGTGTCTCATCACTCTGTTCTGATATTTGAGGCTGTTTCTGCTAGTGCTTGTGATGTTGCTCCTTCCATGTCTGCCTTTGCGCTTCAGTATTTCATTGAGGGACTTACAGAGGAAGCTCGTGCTGATTACCGGAACCTTTCGGCTGCGGCGATCAGGGGAGAGTATGAAGCTTGTTTGACATATGCTGATCTGCTGAAGCAGCGCTGTGTTGAGCAATTCAAAGAAGGGTCTCTGGGTATTGAACAATTAGCCACTGTGGATGGGCTTTGTGATTTGGTCTCGAAAGCAATTGGAGCGTCCGATCCAGTTCGTACATACAATGTCAACCTCTCGGTTTTCACTTCCATTCCCGACTTCTGGGGCATTGGGCAGCTTTTCCCTATTGTCCCAATTCACCGGCTTGATCAAAGGCCGGCTGTGAGAGGTGTGTTATCGGACTTGACCTGTGATAGTGATGGGAAGATCAATAAGTTCATTGGCGGCGAGTCCAGCCTGCCGCTTCACGAAATGGAAGGCAATGGCTCTGGTGGGCGGTACTATTTGGGAATGTTCTTGGGTGGGGCCTATGAGGAGGCACTCGGAGGAGTACACAACCTGTTTGGAGGCCCGAGCGTTGTTCGGGTCTCCCAGAGCGACGGTCCATACAGCTTTGCGGTTACGCGGGCTGTGCCTGGGCCGTCTTGCGCAGACGTCCTCCGTTTGATGCAGCACGAGCCCGAGCTCATGTTCGAGACGCTGAAACACCGTGCAGAGGAGTGTGGTGAGGTCGACGAAGATGGAATGGCGAATTCGGCTTTGGCCACCAGCCTAGCACGCTCCTTCCACAACATGCCGTATCTGTCTGTAGCTTCGTCTTGTTGCCTGACTGCAATGAACAACCATGGTTTGTACTATTGCAGTGAGGATGATTATGACATTGTTGCTGATTCTGGTGCTCCTAATGCTGGTGAGGAGGACTGGTCATATTGCTGTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006576 GO:0006595 GO:0006596 GO:0006807 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0008792 GO:0009058 GO:0009266 GO:0009308 GO:0009309 GO:0009409 GO:0009445 GO:0009446 GO:0009507 GO:0009536 GO:0009611 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009753 GO:0009987 GO:0010033 GO:0016829 GO:0016830 GO:0016831 GO:0033993 GO:0034641 GO:0042221 GO:0042401 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044106 GO:0044237 GO:0044249 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046983 GO:0050896 GO:0071704 GO:0080167 GO:0097164 GO:0097305 GO:1901564 GO:1901566 GO:1901576 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00330 ko01100 map00330 map01100

Pfam Domains

Protein Families

Orn_Arg_deC_N

Protein Analysis

708

Amino Acids

76.4

Weight (kDa)

5.15

Isoelectric Point (pI)

43.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Orn_Arg_deC_N	PF02784	132 - 385	1.4e-34	Pyridoxal-dependent decarboxylase, pyridoxal binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0012001)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16500 AT4G34710 AT4G34710
fragaria_vesca	FvH4_2g10570
malus_domestica	MD05G1055300.v1.1 MD10G1062500.v1.1
prunus_persica	Prupe.8G083100_v2.0.a1
pyrus_communis	pycom05g04560 pycom10g04830
rosa_chinensis	RchiOBHm_Chr6g0268211
rosa_laevigata	RLG00000013925
rosa_multiflora	Rmu_sc0009095.1_g000007
rosa_roxburghii	Rroxscaffold_7G00199960
rosa_rugosa	Rorug06G0039700.1
rosa_samantha	Rh6AG159800 Rh6BG163700 Rh6CG154300 Rh6DG149600
rosa_wichuraiana	Rw6G013820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	437
AatII	GACGTC	2 cut(s)	324, 1842
Acc16I	TGCGCA	1 cut(s)	1834
AccB1I	GGYRCC	1 cut(s)	953
AccBSI	CCGCTC	1 cut(s)	1137
AccI	GTMKAC	2 cut(s)	755, 1917
AccII	CGCG	4 cut(s)	368, 713, 715, 1810
AclWI	GGATC	5 cut(s)	364, 874, 1002, 1015, 1445
AcoI	YGGCCR	4 cut(s)	108, 516, 742, 1947
AcsI	RAATTY	1 cut(s)	1936
AcuI	CTGAAG	2 cut(s)	1217, 1364
AcyI	GRCGYC	3 cut(s)	321, 693, 1839
AdeI	CACNNNGTG	1 cut(s)	1120
AfaI	GTAC	7 cut(s)	197, 410, 587, 1462, 1685, 1737, 2039
AfeI	AGCGCT	1 cut(s)	1352
AflII	CTTAAG	1 cut(s)	326
AgeI	ACCGGT	1 cut(s)	432
AgsI	TTSAA	5 cut(s)	574, 625, 674, 1369, 1391
AhdI	GACNNNNNGTC	2 cut(s)	388, 1102
AjuI	GAANNNNNNNTTGG	2 cut(s)	1928, 1960
Alw21I	GWGCWC	4 cut(s)	168, 510, 1872, 2086
Alw26I	GTCTC	8 cut(s)	150, 229, 879, 1158, 1383, 1432, 1777, 1874
AlwI	GGATC	5 cut(s)	364, 874, 1002, 1015, 1445
AlwNI	CAGNNNCTG	1 cut(s)	856
Ama87I	CYCGRG	4 cut(s)	503, 641, 1756, 1865
Aor51HI	AGCGCT	1 cut(s)	1352
ApeKI	GCWGC	9 cut(s)	29, 134, 525, 856, 1128, 1292, 1348, 1519, 1855
ApoI	RAATTY	1 cut(s)	1936
AsiGI	ACCGGT	1 cut(s)	432
Asp700I	GAANNNNTTC	1 cut(s)	470
AspLEI	GCGC	7 cut(s)	82, 713, 715, 925, 1231, 1353, 1835
AsuC2I	CCSGG	5 cut(s)	45, 61, 247, 413, 493
AsuHPI	GGTGA	6 cut(s)	427, 679, 823, 1535, 1922, 2108
AvaI	CYCGRG	4 cut(s)	503, 641, 1756, 1865
AvaII	GGWCC	6 cut(s)	85, 249, 390, 430, 943, 1787
BaeGI	GKGCMC	1 cut(s)	958
BalI	TGGCCA	2 cut(s)	518, 1949
BamHI	GGATCC	1 cut(s)	1007
BanI	GGYRCC	1 cut(s)	953
BanII	GRGCYC	4 cut(s)	168, 510, 1866, 1872
BauI	CACGAG	2 cut(s)	1266, 1859
Bbv12I	GWGCWC	4 cut(s)	168, 510, 1872, 2086
BbvI	GCAGC	9 cut(s)	16, 146, 512, 843, 1140, 1279, 1360, 1531, 1867
BccI	CCATC	7 cut(s)	598, 800, 899, 998, 1403, 1598, 1919
BceAI	ACGGC	6 cut(s)	178, 256, 454, 614, 1810, 1966
BcgI	CGANNNNNNTGC	4 cut(s)	670, 704, 877, 911
BciVI	GTATCC	1 cut(s)	922
BclI	TGATCA	1 cut(s)	1552
BcnI	CCSGG	5 cut(s)	45, 61, 247, 413, 493
BcoDI	GTCTC	8 cut(s)	150, 229, 879, 1158, 1383, 1432, 1777, 1874
BfaI	CTAG	2 cut(s)	1191, 1958
BfmI	CTRYAG	2 cut(s)	30, 1992
BfoI	RGCGCY	1 cut(s)	1354
BfrI	CTTAAG	1 cut(s)	326
BfuI	GTATCC	1 cut(s)	922
BglII	AGATCT	1 cut(s)	927
Bme18I	GGWCC	6 cut(s)	85, 249, 390, 430, 943, 1787
BmeRI	GACNNNNNGTC	2 cut(s)	388, 1102
BmeT110I	CYCGRG	4 cut(s)	503, 641, 1756, 1865
BmsI	GCATC	2 cut(s)	169, 1842
BplI	GAGNNNNNCTC	2 cut(s)	575, 607
BpmI	CTGGAG	2 cut(s)	332, 842
BpuEI	CTTGAG	1 cut(s)	1070
BpuMI	CCSGG	5 cut(s)	45, 61, 247, 413, 493
Bsa29I	ATCGAT	1 cut(s)	177
BsaBI	GATNNNNATC	1 cut(s)	1012
BsaHI	GRCGYC	3 cut(s)	321, 693, 1839
BsaI	GGTCTC	5 cut(s)	150, 879, 1383, 1432, 1777
BsaWI	WCCGGW	6 cut(s)	432, 456, 474, 1083, 1098, 1278
BsaXI	ACNNNNNCTCC	2 cut(s)	2093, 2123
Bse118I	RCCGGY	6 cut(s)	4, 82, 333, 432, 1545, 1561
Bse1I	ACTGG	3 cut(s)	373, 1454, 2111
Bse3DI	GCAATG	3 cut(s)	1068, 1672, 2025
Bse8I	GATNNNNATC	1 cut(s)	1012
BseCI	ATCGAT	1 cut(s)	177
BseGI	GGATG	3 cut(s)	792, 1414, 2059
BseJI	GATNNNNATC	1 cut(s)	1012
BseMI	GCAATG	3 cut(s)	1068, 1672, 2025
BseMII	CTCAG	3 cut(s)	739, 890, 1017
BseNI	ACTGG	3 cut(s)	373, 1454, 2111
BsePI	GCGCGC	1 cut(s)	711
BseRI	GAGGAG	7 cut(s)	30, 500, 1067, 1733, 1746, 1916, 2114
BseSI	GKGCMC	1 cut(s)	958
BseXI	GCAGC	9 cut(s)	16, 146, 512, 843, 1140, 1279, 1360, 1531, 1867
BsgI	GTGCAG	1 cut(s)	1917
Bsh1236I	CGCG	4 cut(s)	368, 713, 715, 1810
BshNI	GGYRCC	1 cut(s)	953
BshTI	ACCGGT	1 cut(s)	432
BshVI	ATCGAT	1 cut(s)	177
BsiHKAI	GWGCWC	4 cut(s)	168, 510, 1872, 2086
BsiHKCI	CYCGRG	4 cut(s)	503, 641, 1756, 1865
BslFI	GGGAC	7 cut(s)	71, 262, 361, 376, 684, 1263, 1520
BsmAI	GTCTC	8 cut(s)	150, 229, 879, 1158, 1383, 1432, 1777, 1874
BsmBI	CGTCTC	2 cut(s)	229, 1874
BsmFI	GGGAC	7 cut(s)	71, 262, 361, 376, 684, 1263, 1520
BsmI	GAATGC	1 cut(s)	736
Bso31I	GGTCTC	5 cut(s)	150, 879, 1383, 1432, 1777
BsoBI	CYCGRG	4 cut(s)	503, 641, 1756, 1865
Bsp1286I	GDGCHC	6 cut(s)	168, 510, 958, 1866, 1872, 2086
Bsp143I	GATC	9 cut(s)	369, 879, 927, 1007, 1299, 1336, 1450, 1552, 1611
Bsp19I	CCATGG	1 cut(s)	2029
Bsp68I	TCGCGA	1 cut(s)	368
BspCNI	CTCAG	3 cut(s)	738, 889, 1018
BspDI	ATCGAT	1 cut(s)	177
BspFNI	CGCG	4 cut(s)	368, 713, 715, 1810
BspMAI	CTGCAG	1 cut(s)	34
BspPI	GGATC	5 cut(s)	364, 874, 1002, 1015, 1445
BspQI	GCTCTTC	1 cut(s)	648
BspT107I	GGYRCC	1 cut(s)	953
BspTI	CTTAAG	1 cut(s)	326
BspTNI	GGTCTC	5 cut(s)	150, 879, 1383, 1432, 1777
BsrBI	CCGCTC	1 cut(s)	1137
BsrDI	GCAATG	3 cut(s)	1068, 1672, 2025
BsrFI	RCCGGY	6 cut(s)	4, 82, 333, 432, 1545, 1561
BsrI	ACTGG	3 cut(s)	373, 1454, 2111
BssAI	RCCGGY	6 cut(s)	4, 82, 333, 432, 1545, 1561
BssHII	GCGCGC	1 cut(s)	711
BssMI	GATC	9 cut(s)	369, 879, 927, 1007, 1299, 1336, 1450, 1552, 1611
BssNI	GRCGYC	3 cut(s)	321, 693, 1839
BssSI	CACGAG	2 cut(s)	1266, 1859
BssT1I	CCWWGG	1 cut(s)	2029
Bst2BI	CACGAG	2 cut(s)	1266, 1859
Bst4CI	ACNGT	4 cut(s)	205, 1405, 1787, 1895
Bst6I	CTCTTC	2 cut(s)	78, 648
BstACI	GRCGYC	3 cut(s)	321, 693, 1839
BstAFI	CTTAAG	1 cut(s)	326
BstDEI	CTNAG	3 cut(s)	725, 876, 1026
BstDSI	CCRYGG	1 cut(s)	2029
BstEII	GGTNACC	1 cut(s)	539
BstF5I	GGATG	3 cut(s)	792, 1414, 2059
BstFNI	CGCG	4 cut(s)	368, 713, 715, 1810
BstH2I	RGCGCY	1 cut(s)	1354
BstHHI	GCGC	7 cut(s)	82, 713, 715, 925, 1231, 1353, 1835
BstKTI	GATC	9 cut(s)	372, 882, 930, 1010, 1302, 1339, 1453, 1555, 1614
BstMAI	GTCTC	8 cut(s)	150, 229, 879, 1158, 1383, 1432, 1777, 1874
BstMBI	GATC	9 cut(s)	369, 879, 927, 1007, 1299, 1336, 1450, 1552, 1611
BstNSI	RCATGY	1 cut(s)	1981
BstPI	GGTNACC	1 cut(s)	539
BstSFI	CTRYAG	2 cut(s)	30, 1992
BstSLI	GKGCMC	1 cut(s)	958
BstUI	CGCG	4 cut(s)	368, 713, 715, 1810
BstV1I	GCAGC	9 cut(s)	16, 146, 512, 843, 1140, 1279, 1360, 1531, 1867
BstX2I	RGATCY	3 cut(s)	879, 927, 1007
BstYI	RGATCY	3 cut(s)	879, 927, 1007
Bsu15I	ATCGAT	1 cut(s)	177
BsuI	GTATCC	1 cut(s)	922
BsuTUI	ATCGAT	1 cut(s)	177
BtgI	CCRYGG	1 cut(s)	2029
BtsCI	GGATG	3 cut(s)	792, 1414, 2059
BtsI	GCAGTG	3 cut(s)	39, 123, 2053
BtsIMutI	CAGTG	5 cut(s)	39, 123, 1113, 1401, 2053
BtuMI	TCGCGA	1 cut(s)	368
CaiI	CAGNNNCTG	1 cut(s)	856
CfoI	GCGC	7 cut(s)	82, 713, 715, 925, 1231, 1353, 1835
Cfr10I	RCCGGY	6 cut(s)	4, 82, 333, 432, 1545, 1561
ClaI	ATCGAT	1 cut(s)	177
CseI	GACGC	4 cut(s)	35, 682, 1434, 1891
Csp6I	GTAC	7 cut(s)	196, 409, 586, 1461, 1684, 1736, 2038
CspAI	ACCGGT	1 cut(s)	432
CviAII	CATG	7 cut(s)	253, 514, 520, 1216, 1873, 1978, 2030
CviQI	GTAC	7 cut(s)	196, 409, 586, 1461, 1684, 1736, 2038
DdeI	CTNAG	3 cut(s)	725, 876, 1026
DpnI	GATC	9 cut(s)	371, 881, 929, 1009, 1301, 1338, 1452, 1554, 1613
DpnII	GATC	9 cut(s)	369, 879, 927, 1007, 1299, 1336, 1450, 1552, 1611
DraIII	CACNNNGTG	1 cut(s)	1120
DrdI	GACNNNNNNGTC	1 cut(s)	437
DriI	GACNNNNNGTC	2 cut(s)	388, 1102
DseDI	GACNNNNNNGTC	1 cut(s)	437
EaeI	YGGCCR	4 cut(s)	108, 516, 742, 1947
Eam1104I	CTCTTC	2 cut(s)	78, 648
Eam1105I	GACNNNNNGTC	2 cut(s)	388, 1102
EarI	CTCTTC	2 cut(s)	78, 648
EciI	GGCGGA	1 cut(s)	935
Ecl136II	GAGCTC	3 cut(s)	166, 508, 1870
Eco130I	CCWWGG	1 cut(s)	2029
Eco24I	GRGCYC	4 cut(s)	168, 510, 1866, 1872
Eco31I	GGTCTC	5 cut(s)	150, 879, 1383, 1432, 1777
Eco47I	GGWCC	6 cut(s)	85, 249, 390, 430, 943, 1787
Eco47III	AGCGCT	1 cut(s)	1352
Eco53kI	GAGCTC	3 cut(s)	166, 508, 1870
Eco57I	CTGAAG	2 cut(s)	1217, 1364
Eco88I	CYCGRG	4 cut(s)	503, 641, 1756, 1865
Eco91I	GGTNACC	1 cut(s)	539
EcoICRI	GAGCTC	3 cut(s)	166, 508, 1870
EcoO109I	RGGNCCY	2 cut(s)	390, 1710
EcoO65I	GGTNACC	1 cut(s)	539
EcoRI	GAATTC	1 cut(s)	1936
EcoT14I	CCWWGG	1 cut(s)	2029
EcoT38I	GRGCYC	4 cut(s)	168, 510, 1866, 1872
ErhI	CCWWGG	1 cut(s)	2029
Esp3I	CGTCTC	2 cut(s)	229, 1874
FaeI	CATG	7 cut(s)	256, 517, 523, 1219, 1876, 1981, 2033
FalI	AAGNNNNNCTT	2 cut(s)	605, 637
FaqI	GGGAC	7 cut(s)	71, 262, 361, 376, 684, 1263, 1520
FatI	CATG	7 cut(s)	252, 513, 519, 1215, 1872, 1977, 2029
FauI	CCCGC	3 cut(s)	182, 798, 1803
FauNDI	CATATG	2 cut(s)	960, 1330
FbaI	TGATCA	1 cut(s)	1552
FblI	GTMKAC	2 cut(s)	755, 1917
FokI	GGATG	3 cut(s)	779, 1421, 2066
FriOI	GRGCYC	4 cut(s)	168, 510, 1866, 1872
FspBI	CTAG	2 cut(s)	1191, 1958
FspI	TGCGCA	1 cut(s)	1834
GlaI	GCGC	7 cut(s)	81, 712, 714, 924, 1230, 1352, 1834
GsuI	CTGGAG	2 cut(s)	332, 842
HaeII	RGCGCY	1 cut(s)	1354
HgaI	GACGC	4 cut(s)	35, 682, 1434, 1891
HhaI	GCGC	7 cut(s)	82, 713, 715, 925, 1231, 1353, 1835
Hin1I	GRCGYC	3 cut(s)	321, 693, 1839
Hin1II	CATG	7 cut(s)	256, 517, 523, 1219, 1876, 1981, 2033
Hin6I	GCGC	7 cut(s)	80, 711, 713, 923, 1229, 1351, 1833
HinP1I	GCGC	7 cut(s)	80, 711, 713, 923, 1229, 1351, 1833
HincII	GTYRAC	4 cut(s)	756, 786, 1474, 1918
HindII	GTYRAC	4 cut(s)	756, 786, 1474, 1918
HindIII	AAGCTT	1 cut(s)	1317
HinfI	GANTC	9 cut(s)	174, 341, 483, 548, 570, 670, 1022, 1634, 2075
HpaI	GTTAAC	1 cut(s)	786
HphI	GGTGA	6 cut(s)	427, 679, 823, 1535, 1922, 2108
Hpy166II	GTNNAC	7 cut(s)	25, 409, 756, 786, 1474, 1738, 1918
Hpy188III	TCNNGA	9 cut(s)	317, 367, 463, 641, 796, 1429, 1499, 1652, 1879
Hpy8I	GTNNAC	7 cut(s)	25, 409, 756, 786, 1474, 1738, 1918
Hpy99I	CGWCG	4 cut(s)	323, 443, 1787, 1922
HpyAV	CCTTC	6 cut(s)	367, 958, 1221, 1367, 1655, 1978
HpyCH4III	ACNGT	4 cut(s)	205, 1405, 1787, 1895
HpyCH4IV	ACGT	3 cut(s)	222, 321, 1839
HpyF3I	CTNAG	3 cut(s)	725, 876, 1026
HpySE526I	ACGT	3 cut(s)	222, 321, 1839
Hsp92I	GRCGYC	3 cut(s)	321, 693, 1839
Hsp92II	CATG	7 cut(s)	256, 517, 523, 1219, 1876, 1981, 2033
HspAI	GCGC	7 cut(s)	80, 711, 713, 923, 1229, 1351, 1833
KflI	GGGWCCC	1 cut(s)	390
KroI	GCCGGC	2 cut(s)	4, 1561
KroNI	GCCGGC	2 cut(s)	6, 1563
Ksp22I	TGATCA	1 cut(s)	1552
KspAI	GTTAAC	1 cut(s)	786
Kzo9I	GATC	9 cut(s)	369, 879, 927, 1007, 1299, 1336, 1450, 1552, 1611
LguI	GCTCTTC	1 cut(s)	648
Lsp1109I	GCAGC	9 cut(s)	16, 146, 512, 843, 1140, 1279, 1360, 1531, 1867
LweI	GCATC	2 cut(s)	169, 1842
MaeI	CTAG	2 cut(s)	1191, 1958
MaeII	ACGT	3 cut(s)	222, 321, 1839
MaeIII	GTNAC	3 cut(s)	539, 1094, 1804
MalI	GATC	9 cut(s)	371, 881, 929, 1009, 1301, 1338, 1452, 1554, 1613
MbiI	CCGCTC	1 cut(s)	1137
MboI	GATC	9 cut(s)	369, 879, 927, 1007, 1299, 1336, 1450, 1552, 1611
MboII	GAAGA	6 cut(s)	65, 301, 665, 826, 1621, 1934
MfeI	CAATTG	2 cut(s)	674, 1437
MflI	RGATCY	3 cut(s)	879, 927, 1007
MhlI	GDGCHC	6 cut(s)	168, 510, 958, 1866, 1872, 2086
MlsI	TGGCCA	2 cut(s)	518, 1949
MluCI	AATT	8 cut(s)	208, 674, 938, 1364, 1394, 1437, 1539, 1936
MluNI	TGGCCA	2 cut(s)	518, 1949
MlyI	GAGTC	3 cut(s)	477, 1016, 1643
MmeI	TCCRAC	2 cut(s)	183, 1054
Mox20I	TGGCCA	2 cut(s)	518, 1949
MroNI	GCCGGC	2 cut(s)	4, 1561
MroXI	GAANNNNTTC	1 cut(s)	470
MscI	TGGCCA	2 cut(s)	518, 1949
MseI	TTAA	2 cut(s)	327, 785
MslI	CAYNNNNRTG	1 cut(s)	518
Msp20I	TGGCCA	2 cut(s)	518, 1949
MspCI	CTTAAG	1 cut(s)	326
MunI	CAATTG	2 cut(s)	674, 1437
Mva1269I	GAATGC	1 cut(s)	736
MvnI	CGCG	4 cut(s)	368, 713, 715, 1810
NaeI	GCCGGC	2 cut(s)	6, 1563
NciI	CCSGG	5 cut(s)	45, 61, 247, 413, 493
NcoI	CCATGG	1 cut(s)	2029
NdeI	CATATG	2 cut(s)	960, 1330
NdeII	GATC	9 cut(s)	369, 879, 927, 1007, 1299, 1336, 1450, 1552, 1611
NgoMIV	GCCGGC	2 cut(s)	4, 1561
NlaIII	CATG	7 cut(s)	256, 517, 523, 1219, 1876, 1981, 2033
NmeAIII	GCCGAG	1 cut(s)	669
NmuCI	GTSAC	1 cut(s)	1094
NruI	TCGCGA	1 cut(s)	368
NsbI	TGCGCA	1 cut(s)	1834
NspI	RCATGY	1 cut(s)	1981
PaeR7I	CTCGAG	1 cut(s)	641
PauI	GCGCGC	1 cut(s)	711
PciSI	GCTCTTC	1 cut(s)	648
PcsI	WCGNNNNNNNCGW	1 cut(s)	1295
PctI	GAATGC	1 cut(s)	736
PdiI	GCCGGC	2 cut(s)	6, 1563
PdmI	GAANNNNTTC	1 cut(s)	470
PfeI	GAWTC	6 cut(s)	174, 341, 548, 570, 670, 2075
PflFI	GACNNNGTC	1 cut(s)	452
PfoI	TCCNGGA	1 cut(s)	245
PinAI	ACCGGT	1 cut(s)	432
PleI	GAGTC	3 cut(s)	477, 1016, 1642
PpsI	GAGTC	3 cut(s)	477, 1016, 1642
PpuMI	RGGWCCY	1 cut(s)	390
Psp124BI	GAGCTC	3 cut(s)	168, 510, 1872
Psp5II	RGGWCCY	1 cut(s)	390
PspEI	GGTNACC	1 cut(s)	539
PspPPI	RGGWCCY	1 cut(s)	390
PstI	CTGCAG	1 cut(s)	34
PstNI	CAGNNNCTG	1 cut(s)	856
PsuI	RGATCY	3 cut(s)	879, 927, 1007
PsyI	GACNNNGTC	1 cut(s)	452
PteI	GCGCGC	1 cut(s)	711
RruI	TCGCGA	1 cut(s)	368
RsaI	GTAC	7 cut(s)	197, 410, 587, 1462, 1685, 1737, 2039
RsaNI	GTAC	7 cut(s)	196, 409, 586, 1461, 1684, 1736, 2038
RseI	CAYNNNNRTG	1 cut(s)	518
SacI	GAGCTC	3 cut(s)	168, 510, 1872
SalI	GTCGAC	2 cut(s)	754, 1916
SapI	GCTCTTC	1 cut(s)	648
SaqAI	TTAA	2 cut(s)	327, 785
Sau3AI	GATC	9 cut(s)	369, 879, 927, 1007, 1299, 1336, 1450, 1552, 1611
SchI	GAGTC	3 cut(s)	477, 1016, 1643
SduI	GDGCHC	6 cut(s)	168, 510, 958, 1866, 1872, 2086
SfaNI	GCATC	2 cut(s)	169, 1842
SfcI	CTRYAG	2 cut(s)	30, 1992
Sfr274I	CTCGAG	1 cut(s)	641
SinI	GGWCC	6 cut(s)	85, 249, 390, 430, 943, 1787
SlaI	CTCGAG	1 cut(s)	641
SmiMI	CAYNNNNRTG	1 cut(s)	518
SmlI	CTYRAG	3 cut(s)	326, 641, 1049
SmoI	CTYRAG	3 cut(s)	326, 641, 1049
Sse9I	AATT	8 cut(s)	208, 674, 938, 1364, 1394, 1437, 1539, 1936
SspMI	CTAG	2 cut(s)	1191, 1958
SstI	GAGCTC	3 cut(s)	168, 510, 1872
StyI	CCWWGG	1 cut(s)	2029
TaaI	ACNGT	4 cut(s)	205, 1405, 1787, 1895
TaiI	ACGT	3 cut(s)	225, 324, 1842
TasI	AATT	8 cut(s)	208, 674, 938, 1364, 1394, 1437, 1539, 1936
TatI	WGTACW	3 cut(s)	585, 1735, 2037
TauI	GCSGC	6 cut(s)	140, 923, 1140, 1298, 1632, 1648
TfiI	GAWTC	6 cut(s)	174, 341, 548, 570, 670, 2075
Tru1I	TTAA	2 cut(s)	327, 785
Tru9I	TTAA	2 cut(s)	327, 785
TscAI	CASTG	5 cut(s)	39, 130, 1113, 1408, 2053
TseFI	GTSAC	1 cut(s)	1094
TseI	GCWGC	9 cut(s)	29, 134, 525, 856, 1128, 1292, 1348, 1519, 1855
Tsp45I	GTSAC	1 cut(s)	1094
TspDTI	ATGAA	6 cut(s)	854, 977, 1231, 1329, 1612, 2036
TspGWI	ACGGA	3 cut(s)	217, 686, 1835
TspRI	CASTG	5 cut(s)	39, 130, 1113, 1408, 2053
Tth111I	GACNNNGTC	1 cut(s)	452
Vha464I	CTTAAG	1 cut(s)	326
VpaK11BI	GGWCC	6 cut(s)	85, 249, 390, 430, 943, 1787
XapI	RAATTY	1 cut(s)	1936
XceI	RCATGY	1 cut(s)	1981
XhoI	CTCGAG	1 cut(s)	641
XmiI	GTMKAC	2 cut(s)	755, 1917
XmnI	GAANNNNTTC	1 cut(s)	470
XspI	CTAG	2 cut(s)	1191, 1958
ZraI	GACGTC	2 cut(s)	322, 1840

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.