pycom05g17380

G3BP-like protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
20538445 .. 20542357
3913 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g17380.7

Sequence Viewer

Length: 1347 bp
ATGGCGAGTTCTTATCCGGGAGCTGTTAGTGCTGTTCAGGTGGGTTCGTACTTTGTGACCCAGTACTATCAGATTCTTCAAAAGAAACCCGATGTTGTTCATCAGTTCTACTCTGATGGAAGCTCCATGATTCGTATCGATGGCGATGCAACGGAATCTGCTGCCGGTATACTGCAAATTCATTCACTCGTAGTATCTCTAGGTGTTACCTCAATTGAGATCCAGACAATCAATTCCAGTGATTCTTGGGATGGAGGTATTCTTGTGATGGTTAAAGGGTTTGTTAAAACAAGGGAATCAAGCGGAAAGAGGAAATTTGTCCAGACTTTCTTTCTGGCTCCCCAGGACAAAGGTTATTTTGTTCTCAATGATATGCTTCAGTTCATTGAGGATGAAGTTGCTTTCCAACATCCTGAACCCATACAGTCAGAAAGCAGATTTGATATGCAACTTAGCGCTTCTAGCCCCCTTCCGGAACCACCAGTTTCTGACTATGTTTATGAGGAGGATCCCAGGGAGTATGTGAACTCCGTTGATGTAGAAGATGATCCAGTTGATAAGTATAGTCTCCCAGAGCAACAGGTGCAGCAAGATTTTGAGACTGAAGTTGTGGTGGAGGAAACTCATGCAGAGGAGACATATTCTTCGTTTCAAAGTGTGGTAAACAATGTGCAAGACGAACCTGCTGCTGCTGTGGAGGAACCGGTGGGAGAGCCTCAAAAGAAAACTTACGCTTCTATATTGCGGGTTGCTAAAGAACCGTCTGCACCAGTAGCAGCTCCACAACCTTATAATAGAAGTGCTCAAACTTCATCAGAGTGGAGTTACACACCTCAGCCTGCTGTTGAACAATCCAACTCTGCTCAGTCATTTGTGCCCGAGTCTGGGGCAGAAGCAACAGAGGAAGGTTATGCACTGGAGGAAGAAGGTGAACTTCTGAAATCTGTCTATGTAAGAAATTTGCCTCCTACGGTTTCTGAAGATGAGATTGAGGAGGAGTTTAAAAACTTTGGTCAAATTAGACCTGATGGGGTCTTTGTTAGGGCTCGCAAGGAAATTGGAGTCTGCTACGCTTTTGTTGAATATGAAGACATTGCTAGCGTTCACAATGCACTCAAGGCATCTCCAATTCATTTAGCTGGAAGGCAAGTTTACATTGAGGAGCGGAGACCAAACAGCGCTGGAGCGGCAGCTCGAGGAAGAGGAAGGGGCAGAGGCAGAGGCGGTTACCAAACTGACGCCACAAGGGGGCGTTTTGGTGGCCGGGGTTCAGGCAGGGGTAGTTACCAGGATGGAGATTACAACAGACCAAGAGGCAATGGTTTCCATCAGCGTGGCACACGATAA

Protein Analysis

449

Amino Acids

49.55

Weight (kDa)

4.73

Isoelectric Point (pI)

58.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011872)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 792
Acc36I ACCTGC 1 cut(s) 691
AccBSI CCGCTC 2 cut(s) 1165, 1187
AccI GTMKAC 1 cut(s) 169
AccIII TCCGGA 1 cut(s) 472
AciI CCGC 5 cut(s) 303, 745, 1165, 1187, 1224
AclWI GGATC 4 cut(s) 214, 503, 516, 542
AcoI YGGCCR 1 cut(s) 1261
AcsI RAATTY 3 cut(s) 177, 314, 958
AcuI CTGAAG 3 cut(s) 362, 624, 999
AcyI GRCGYC 1 cut(s) 1239
AfaI GTAC 2 cut(s) 50, 65
AfeI AGCGCT 2 cut(s) 457, 1180
AfiI CCNNNNNNNGG 4 cut(s) 472, 884, 885, 1248
AgeI ACCGGT 1 cut(s) 703
AgsI TTSAA 4 cut(s) 80, 653, 848, 1082
AjnI CCWGG 3 cut(s) 342, 512, 1287
AluBI AGCT 5 cut(s) 23, 123, 779, 1139, 1193
AluI AGCT 5 cut(s) 23, 123, 779, 1139, 1193
Alw21I GWGCWC 1 cut(s) 805
Alw26I GTCTC 4 cut(s) 572, 593, 629, 1162
AlwI GGATC 4 cut(s) 214, 503, 516, 542
AlwNI CAGNNNCTG 1 cut(s) 488
Ama87I CYCGRG 2 cut(s) 878, 1194
Aor13HI TCCGGA 1 cut(s) 472
Aor51HI AGCGCT 2 cut(s) 457, 1180
AoxI GGCC 1 cut(s) 1261
ApeKI GCWGC 6 cut(s) 161, 586, 686, 689, 776, 1190
ApoI RAATTY 3 cut(s) 177, 314, 958
ArsI GACNNNNNNTTYG 2 cut(s) 628, 660
AsiGI ACCGGT 1 cut(s) 703
AspLEI GCGC 2 cut(s) 458, 1181
AsuC2I CCSGG 2 cut(s) 18, 1265
AsuHPI GGTGA 1 cut(s) 941
AsuNHI GCTAGC 1 cut(s) 1097
AvaI CYCGRG 2 cut(s) 878, 1194
BaeGI GKGCMC 1 cut(s) 879
BamHI GGATCC 1 cut(s) 508
BanII GRGCYC 1 cut(s) 1048
BbsI GAAGAC 1 cut(s) 1095
Bbv12I GWGCWC 1 cut(s) 805
BbvCI CCTCAGC 1 cut(s) 834
BbvI GCAGC 6 cut(s) 148, 598, 673, 676, 788, 1202
BccI CCATC 7 cut(s) 110, 134, 245, 262, 1022, 1286, 1335
BcgI CGANNNNNNTGC 4 cut(s) 128, 162, 668, 702
BciT130I CCWGG 3 cut(s) 344, 514, 1289
BcnI CCSGG 2 cut(s) 18, 1265
BcoDI GTCTC 4 cut(s) 572, 593, 629, 1162
BfaI CTAG 3 cut(s) 200, 462, 1098
BfoI RGCGCY 2 cut(s) 459, 1182
BfuAI ACCTGC 1 cut(s) 691
BisI GCNGC 7 cut(s) 162, 587, 687, 690, 777, 1188, 1191
BlsI GCNGC 7 cut(s) 163, 588, 688, 691, 778, 1189, 1192
BmcAI AGTACT 1 cut(s) 65
Bme1390I CCNGG 5 cut(s) 18, 344, 514, 1265, 1289
BmeT110I CYCGRG 2 cut(s) 878, 1194
BmiI GGNNCC 4 cut(s) 339, 477, 510, 702
BmrFI CCNGG 5 cut(s) 18, 344, 514, 1265, 1289
BmrI ACTGGG 1 cut(s) 55
BmsI GCATC 2 cut(s) 136, 1130
BmtI GCTAGC 1 cut(s) 1101
BmuI ACTGGG 1 cut(s) 55
BpiI GAAGAC 1 cut(s) 1095
BpmI CTGGAG 2 cut(s) 938, 1203
Bpu10I CCTNAGC 1 cut(s) 834
BpuEI CTTGAG 1 cut(s) 1100
BpuMI CCSGG 2 cut(s) 18, 1265
Bsa29I ATCGAT 1 cut(s) 138
BsaBI GATNNNNATC 1 cut(s) 134
BsaHI GRCGYC 1 cut(s) 1239
BsaI GGTCTC 1 cut(s) 1162
BsaJI CCNNGG 4 cut(s) 342, 512, 513, 1264
BsaWI WCCGGW 2 cut(s) 472, 703
Bsc4I CCNNNNNNNGG 4 cut(s) 472, 884, 885, 1248
Bse118I RCCGGY 2 cut(s) 164, 703
Bse1I ACTGG 6 cut(s) 61, 237, 482, 551, 770, 921
Bse3DI GCAATG 2 cut(s) 1092, 1324
Bse8I GATNNNNATC 1 cut(s) 134
BseAI TCCGGA 1 cut(s) 472
BseBI CCWGG 3 cut(s) 344, 514, 1289
BseCI ATCGAT 1 cut(s) 138
BseDI CCNNGG 4 cut(s) 342, 512, 513, 1264
BseGI GGATG 4 cut(s) 256, 397, 409, 1297
BseJI GATNNNNATC 1 cut(s) 134
BseLI CCNNNNNNNGG 4 cut(s) 472, 884, 885, 1248
BseMI GCAATG 2 cut(s) 1092, 1324
BseMII CTCAG 2 cut(s) 848, 878
BseNI ACTGG 6 cut(s) 61, 237, 482, 551, 770, 921
BseRI GAGGAG 5 cut(s) 518, 647, 1007, 1010, 1175
BseSI GKGCMC 1 cut(s) 879
BseXI GCAGC 6 cut(s) 148, 598, 673, 676, 788, 1202
BsgI GTGCAG 2 cut(s) 605, 750
BshFI GGCC 1 cut(s) 1263
BshTI ACCGGT 1 cut(s) 703
BshVI ATCGAT 1 cut(s) 138
BsiHKAI GWGCWC 1 cut(s) 805
BsiHKCI CYCGRG 2 cut(s) 878, 1194
BsiSI CCGG 5 cut(s) 17, 165, 473, 704, 1264
BslI CCNNNNNNNGG 4 cut(s) 472, 884, 885, 1248
BsmAI GTCTC 4 cut(s) 572, 593, 629, 1162
BsnI GGCC 1 cut(s) 1263
Bso31I GGTCTC 1 cut(s) 1162
BsoBI CYCGRG 2 cut(s) 878, 1194
Bsp1286I GDGCHC 3 cut(s) 805, 879, 1048
Bsp13I TCCGGA 1 cut(s) 472
Bsp143I GATC 3 cut(s) 219, 508, 547
BspACI CCGC 5 cut(s) 303, 745, 1165, 1187, 1224
BspANI GGCC 1 cut(s) 1263
BspCNI CTCAG 2 cut(s) 847, 877
BspDI ATCGAT 1 cut(s) 138
BspEI TCCGGA 1 cut(s) 472
BspLI GGNNCC 4 cut(s) 339, 477, 510, 702
BspMI ACCTGC 1 cut(s) 691
BspOI GCTAGC 1 cut(s) 1101
BspPI GGATC 4 cut(s) 214, 503, 516, 542
BspTNI GGTCTC 1 cut(s) 1162
BsrBI CCGCTC 2 cut(s) 1165, 1187
BsrDI GCAATG 2 cut(s) 1092, 1324
BsrFI RCCGGY 2 cut(s) 164, 703
BsrI ACTGG 6 cut(s) 61, 237, 482, 551, 770, 921
BssAI RCCGGY 2 cut(s) 164, 703
BssECI CCNNGG 4 cut(s) 342, 512, 513, 1264
BssMI GATC 3 cut(s) 219, 508, 547
BssNAI GTATAC 1 cut(s) 170
BssNI GRCGYC 1 cut(s) 1239
Bst1107I GTATAC 1 cut(s) 170
Bst2UI CCWGG 3 cut(s) 344, 514, 1289
Bst4CI ACNGT 3 cut(s) 426, 762, 973
Bst6I CTCTTC 1 cut(s) 1195
BstACI GRCGYC 1 cut(s) 1239
BstAPI GCANNNNNTGC 1 cut(s) 583
BstC8I GCNNGC 3 cut(s) 840, 1048, 1099
BstDEI CTNAG 3 cut(s) 452, 834, 864
BstEII GGTNACC 1 cut(s) 1226
BstF5I GGATG 4 cut(s) 256, 397, 409, 1297
BstH2I RGCGCY 2 cut(s) 459, 1182
BstHHI GCGC 2 cut(s) 458, 1181
BstKTI GATC 3 cut(s) 222, 511, 550
BstMAI GTCTC 4 cut(s) 572, 593, 629, 1162
BstMBI GATC 3 cut(s) 219, 508, 547
BstMWI GCNNNNNNNGC 6 cut(s) 29, 462, 583, 773, 1118, 1187
BstNI CCWGG 3 cut(s) 344, 514, 1289
BstPI GGTNACC 1 cut(s) 1226
BstSCI CCNGG 5 cut(s) 16, 342, 512, 1263, 1287
BstSLI GKGCMC 1 cut(s) 879
BstV1I GCAGC 6 cut(s) 148, 598, 673, 676, 788, 1202
BstV2I GAAGAC 1 cut(s) 1095
BstX2I RGATCY 2 cut(s) 219, 508
BstXI CCANNNNNNTGG 1 cut(s) 1334
BstYI RGATCY 2 cut(s) 219, 508
BstZ17I GTATAC 1 cut(s) 170
Bsu15I ATCGAT 1 cut(s) 138
BsuRI GGCC 1 cut(s) 1263
BsuTUI ATCGAT 1 cut(s) 138
BtgZI GCGATG 1 cut(s) 159
BtsCI GGATG 4 cut(s) 256, 397, 409, 1297
BtsIMutI CAGTG 2 cut(s) 244, 914
BveI ACCTGC 1 cut(s) 691
Cac8I GCNNGC 3 cut(s) 840, 1048, 1099
CaiI CAGNNNCTG 1 cut(s) 488
CfoI GCGC 2 cut(s) 458, 1181
Cfr10I RCCGGY 2 cut(s) 164, 703
ClaI ATCGAT 1 cut(s) 138
CseI GACGC 1 cut(s) 1247
Csp6I GTAC 2 cut(s) 49, 64
CspAI ACCGGT 1 cut(s) 703
CviAII CATG 2 cut(s) 127, 626
CviQI GTAC 2 cut(s) 49, 64
DdeI CTNAG 3 cut(s) 452, 834, 864
DpnI GATC 3 cut(s) 221, 510, 549
DpnII GATC 3 cut(s) 219, 508, 547
DraI TTTAAA 1 cut(s) 1003
EaeI YGGCCR 1 cut(s) 1261
Eam1104I CTCTTC 1 cut(s) 1195
EarI CTCTTC 1 cut(s) 1195
Eco24I GRGCYC 1 cut(s) 1048
Eco31I GGTCTC 1 cut(s) 1162
Eco47III AGCGCT 2 cut(s) 457, 1180
Eco57I CTGAAG 3 cut(s) 362, 624, 999
Eco88I CYCGRG 2 cut(s) 878, 1194
Eco91I GGTNACC 1 cut(s) 1226
EcoO65I GGTNACC 1 cut(s) 1226
EcoRII CCWGG 3 cut(s) 342, 512, 1287
EcoT38I GRGCYC 1 cut(s) 1048
FaeI CATG 2 cut(s) 130, 629
FalI AAGNNNNNCTT 2 cut(s) 918, 950
FatI CATG 2 cut(s) 126, 625
FauI CCCGC 1 cut(s) 738
FblI GTMKAC 1 cut(s) 169
Fnu4HI GCNGC 7 cut(s) 162, 587, 687, 690, 777, 1188, 1191
FokI GGATG 4 cut(s) 263, 396, 404, 1304
FriOI GRGCYC 1 cut(s) 1048
Fsp4HI GCNGC 7 cut(s) 162, 587, 687, 690, 777, 1188, 1191
FspBI CTAG 3 cut(s) 200, 462, 1098
GlaI GCGC 2 cut(s) 457, 1180
GluI GCNGC 7 cut(s) 162, 587, 687, 690, 777, 1188, 1191
GsuI CTGGAG 2 cut(s) 938, 1203
HaeII RGCGCY 2 cut(s) 459, 1182
HaeIII GGCC 1 cut(s) 1263
HapII CCGG 5 cut(s) 17, 165, 473, 704, 1264
HgaI GACGC 1 cut(s) 1247
HhaI GCGC 2 cut(s) 458, 1181
Hin1I GRCGYC 1 cut(s) 1239
Hin1II CATG 2 cut(s) 130, 629
Hin6I GCGC 2 cut(s) 456, 1179
HinP1I GCGC 2 cut(s) 456, 1179
HinfI GANTC 7 cut(s) 73, 130, 155, 242, 296, 881, 1062
HpaII CCGG 5 cut(s) 17, 165, 473, 704, 1264
HphI GGTGA 1 cut(s) 941
Hpy166II GTNNAC 6 cut(s) 170, 526, 664, 932, 1105, 1153
Hpy188I TCNGA 7 cut(s) 72, 115, 430, 490, 817, 939, 979
Hpy188III TCNNGA 4 cut(s) 223, 322, 413, 473
Hpy8I GTNNAC 6 cut(s) 170, 526, 664, 932, 1105, 1153
HpyAV CCTTC 5 cut(s) 479, 899, 920, 1137, 1200
HpyCH4III ACNGT 3 cut(s) 426, 762, 973
HpyCH4V TGCA 9 cut(s) 149, 175, 448, 586, 629, 673, 767, 914, 1112
HpyF10VI GCNNNNNNNGC 6 cut(s) 29, 462, 583, 773, 1118, 1187
HpyF3I CTNAG 3 cut(s) 452, 834, 864
Hsp92I GRCGYC 1 cut(s) 1239
Hsp92II CATG 2 cut(s) 130, 629
HspAI GCGC 2 cut(s) 456, 1179
Kpn2I TCCGGA 1 cut(s) 472
Kzo9I GATC 3 cut(s) 219, 508, 547
LmnI GCTCC 6 cut(s) 20, 128, 343, 784, 1162, 1184
Lsp1109I GCAGC 6 cut(s) 148, 598, 673, 676, 788, 1202
LweI GCATC 2 cut(s) 136, 1130
MaeI CTAG 3 cut(s) 200, 462, 1098
MaeIII GTNAC 5 cut(s) 55, 205, 824, 1226, 1283
MalI GATC 3 cut(s) 221, 510, 549
MbiI CCGCTC 2 cut(s) 1165, 1187
MboI GATC 3 cut(s) 219, 508, 547
MboII GAAGA 7 cut(s) 68, 554, 636, 935, 992, 1100, 1212
MfeI CAATTG 1 cut(s) 213
MflI RGATCY 2 cut(s) 219, 508
MhlI GDGCHC 3 cut(s) 805, 879, 1048
MluCI AATT 8 cut(s) 177, 213, 232, 314, 958, 1017, 1056, 1128
MlyI GAGTC 2 cut(s) 890, 1071
MmeI TCCRAC 2 cut(s) 430, 879
MroI TCCGGA 1 cut(s) 472
MseI TTAA 3 cut(s) 273, 285, 1002
MslI CAYNNNNRTG 2 cut(s) 817, 1332
MspI CCGG 5 cut(s) 17, 165, 473, 704, 1264
MspR9I CCNGG 5 cut(s) 18, 344, 514, 1265, 1289
MunI CAATTG 1 cut(s) 213
MvaI CCWGG 3 cut(s) 344, 514, 1289
MwoI GCNNNNNNNGC 6 cut(s) 29, 462, 583, 773, 1118, 1187
NciI CCSGG 2 cut(s) 18, 1265
NdeII GATC 3 cut(s) 219, 508, 547
NheI GCTAGC 1 cut(s) 1097
NlaIII CATG 2 cut(s) 130, 629
NlaIV GGNNCC 4 cut(s) 339, 477, 510, 702
NmuCI GTSAC 1 cut(s) 55
PaeR7I CTCGAG 1 cut(s) 1194
PasI CCCWGGG 1 cut(s) 513
PfeI GAWTC 5 cut(s) 73, 130, 155, 242, 296
PfoI TCCNGGA 1 cut(s) 16
PinAI ACCGGT 1 cut(s) 703
PkrI GCNGC 7 cut(s) 163, 588, 688, 691, 778, 1189, 1192
PleI GAGTC 2 cut(s) 889, 1070
PpsI GAGTC 2 cut(s) 889, 1070
PsiI TTATAA 1 cut(s) 792
Psp6I CCWGG 3 cut(s) 342, 512, 1287
PspEI GGTNACC 1 cut(s) 1226
PspGI CCWGG 3 cut(s) 342, 512, 1287
PspN4I GGNNCC 4 cut(s) 339, 477, 510, 702
PspXI VCTCGAGB 1 cut(s) 1194
PstNI CAGNNNCTG 1 cut(s) 488
PsuI RGATCY 2 cut(s) 219, 508
RsaI GTAC 2 cut(s) 50, 65
RsaNI GTAC 2 cut(s) 49, 64
RseI CAYNNNNRTG 2 cut(s) 817, 1332
SaqAI TTAA 3 cut(s) 273, 285, 1002
SatI GCNGC 7 cut(s) 162, 587, 687, 690, 777, 1188, 1191
Sau3AI GATC 3 cut(s) 219, 508, 547
ScaI AGTACT 1 cut(s) 65
SchI GAGTC 2 cut(s) 890, 1071
ScrFI CCNGG 5 cut(s) 18, 344, 514, 1265, 1289
SduI GDGCHC 3 cut(s) 805, 879, 1048
SfaNI GCATC 2 cut(s) 136, 1130
Sfr274I CTCGAG 1 cut(s) 1194
SlaI CTCGAG 1 cut(s) 1194
SmiMI CAYNNNNRTG 2 cut(s) 817, 1332
SmlI CTYRAG 2 cut(s) 1115, 1194
SmoI CTYRAG 2 cut(s) 1115, 1194
Sse9I AATT 8 cut(s) 177, 213, 232, 314, 958, 1017, 1056, 1128
SsiI CCGC 5 cut(s) 303, 745, 1165, 1187, 1224
SspMI CTAG 3 cut(s) 200, 462, 1098
StyD4I CCNGG 5 cut(s) 16, 342, 512, 1263, 1287
TaaI ACNGT 3 cut(s) 426, 762, 973
TaqI TCGA 2 cut(s) 138, 1195
TasI AATT 8 cut(s) 177, 213, 232, 314, 958, 1017, 1056, 1128
TatI WGTACW 1 cut(s) 63
TauI GCSGC 1 cut(s) 1190
TfiI GAWTC 5 cut(s) 73, 130, 155, 242, 296
Tru1I TTAA 3 cut(s) 273, 285, 1002
Tru9I TTAA 3 cut(s) 273, 285, 1002
TscAI CASTG 2 cut(s) 244, 921
TseFI GTSAC 1 cut(s) 55
TseI GCWGC 6 cut(s) 161, 586, 686, 689, 776, 1190
Tsp45I GTSAC 1 cut(s) 55
TspDTI ATGAA 7 cut(s) 89, 170, 373, 408, 801, 1101, 1121
TspGWI ACGGA 2 cut(s) 167, 520
TspRI CASTG 2 cut(s) 244, 921
XapI RAATTY 3 cut(s) 177, 314, 958
XhoI CTCGAG 1 cut(s) 1194
XmiI GTMKAC 1 cut(s) 169
XspI CTAG 3 cut(s) 200, 462, 1098
ZrmI AGTACT 1 cut(s) 65
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.