pycom10g11630

G3BP-like protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
15212171 .. 15212782
612 bp
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UTR
Exon/CDS
Intron
pycom10g11630.2

Sequence Viewer

Length: 357 bp
ATGGTTCAATTGGCCATGTCCAGGTTTTGGTATTTATTCTTTGAATGCACAACCAATATAAGAAATTTGCCTCCTACGGTTACTGAAGATGAGATTGAGGAGGAGTTTAAAAACTTGGGTCAAATTATGCATGATGAGGGCTGGCATGTTGCGTTTGTCTCTAAAACTATGAACTGGATCGGAGCTAAGGTAGAATTTGGTGCATGCAGGAAATTGGAGTCTGCTACGCTTGTGTTGAATATGAAGACATTGTTGGCGTTCACAATGCACTCAAGGTTTGATTTTTTTGTGATAAGTTGTTTAGTTTTTTGCTTTCGTTTCAAAATGTTCATTGGATTCAGGCAAATTTCGTGTTAG

Protein Analysis

119

Amino Acids

13.92

Weight (kDa)

6.81

Isoelectric Point (pI)

67.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011872)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 27
AclWI GGATC 1 cut(s) 185
AcoI YGGCCR 1 cut(s) 12
AcsI RAATTY 3 cut(s) 64, 194, 345
AcuI CTGAAG 1 cut(s) 105
AfiI CCNNNNNNNGG 2 cut(s) 21, 27
AgsI TTSAA 4 cut(s) 8, 44, 238, 322
AjnI CCWGG 1 cut(s) 20
AjuI GAANNNNNNNTTGG 2 cut(s) 236, 268
AluBI AGCT 1 cut(s) 185
AluI AGCT 1 cut(s) 185
Alw26I GTCTC 1 cut(s) 163
AlwI GGATC 1 cut(s) 185
AoxI GGCC 1 cut(s) 12
ApoI RAATTY 3 cut(s) 64, 194, 345
BalI TGGCCA 1 cut(s) 14
BbsI GAAGAC 1 cut(s) 251
BciT130I CCWGG 1 cut(s) 22
BcoDI GTCTC 1 cut(s) 163
Bme1390I CCNGG 1 cut(s) 22
BmrFI CCNGG 1 cut(s) 22
BpiI GAAGAC 1 cut(s) 251
Bpu10I CCTNAGC 1 cut(s) 186
BpuEI CTTGAG 1 cut(s) 256
BsaXI ACNNNNNCTCC 2 cut(s) 174, 204
Bsc4I CCNNNNNNNGG 2 cut(s) 21, 27
Bse1I ACTGG 1 cut(s) 179
BseBI CCWGG 1 cut(s) 22
BseLI CCNNNNNNNGG 2 cut(s) 21, 27
BseNI ACTGG 1 cut(s) 179
BseRI GAGGAG 2 cut(s) 113, 116
BshFI GGCC 1 cut(s) 14
BslI CCNNNNNNNGG 2 cut(s) 21, 27
BsmAI GTCTC 1 cut(s) 163
BsmI GAATGC 1 cut(s) 50
BsnI GGCC 1 cut(s) 14
Bsp143I GATC 1 cut(s) 177
BspANI GGCC 1 cut(s) 14
BspPI GGATC 1 cut(s) 185
BsrI ACTGG 1 cut(s) 179
BssMI GATC 1 cut(s) 177
Bst2UI CCWGG 1 cut(s) 22
Bst4CI ACNGT 1 cut(s) 79
BstC8I GCNNGC 2 cut(s) 143, 205
BstDEI CTNAG 1 cut(s) 186
BstKTI GATC 1 cut(s) 180
BstMAI GTCTC 1 cut(s) 163
BstMBI GATC 1 cut(s) 177
BstNI CCWGG 1 cut(s) 22
BstNSI RCATGY 2 cut(s) 149, 207
BstSCI CCNGG 1 cut(s) 20
BstV2I GAAGAC 1 cut(s) 251
BsuRI GGCC 1 cut(s) 14
Cac8I GCNNGC 2 cut(s) 143, 205
CviAII CATG 4 cut(s) 16, 131, 146, 204
CviJI RGCY 3 cut(s) 14, 141, 185
CviKI_1 RGCY 3 cut(s) 14, 141, 185
DdeI CTNAG 1 cut(s) 186
DpnI GATC 1 cut(s) 179
DpnII GATC 1 cut(s) 177
DraI TTTAAA 1 cut(s) 109
EaeI YGGCCR 1 cut(s) 12
Eco57I CTGAAG 1 cut(s) 105
EcoRII CCWGG 1 cut(s) 20
EcoT22I ATGCAT 1 cut(s) 132
FaeI CATG 4 cut(s) 19, 134, 149, 207
FaiI YATR 8 cut(s) 17, 59, 128, 132, 147, 170, 205, 242
FatI CATG 4 cut(s) 15, 130, 145, 203
HaeIII GGCC 1 cut(s) 14
Hin1II CATG 4 cut(s) 19, 134, 149, 207
HinfI GANTC 2 cut(s) 218, 336
Hpy166II GTNNAC 1 cut(s) 261
Hpy188I TCNGA 1 cut(s) 182
Hpy8I GTNNAC 1 cut(s) 261
HpyCH4III ACNGT 1 cut(s) 79
HpyCH4V TGCA 5 cut(s) 48, 130, 203, 207, 268
HpyF3I CTNAG 1 cut(s) 186
Hsp92II CATG 4 cut(s) 19, 134, 149, 207
Kzo9I GATC 1 cut(s) 177
LmnI GCTCC 1 cut(s) 182
LpnPI CCDG 6 cut(s) 7, 34, 127, 160, 193, 325
MaeIII GTNAC 1 cut(s) 79
MalI GATC 1 cut(s) 179
MboI GATC 1 cut(s) 177
MboII GAAGA 2 cut(s) 98, 256
MfeI CAATTG 1 cut(s) 8
MlsI TGGCCA 1 cut(s) 14
MluCI AATT 6 cut(s) 8, 64, 123, 194, 212, 345
MluNI TGGCCA 1 cut(s) 14
MlyI GAGTC 1 cut(s) 227
MnlI CCTC 4 cut(s) 81, 91, 94, 130
Mox20I TGGCCA 1 cut(s) 14
Mph1103I ATGCAT 1 cut(s) 132
MscI TGGCCA 1 cut(s) 14
MseI TTAA 1 cut(s) 108
Msp20I TGGCCA 1 cut(s) 14
MspR9I CCNGG 1 cut(s) 22
MunI CAATTG 1 cut(s) 8
Mva1269I GAATGC 1 cut(s) 50
MvaI CCWGG 1 cut(s) 22
NdeII GATC 1 cut(s) 177
NlaIII CATG 4 cut(s) 19, 134, 149, 207
NsiI ATGCAT 1 cut(s) 132
NspI RCATGY 2 cut(s) 149, 207
PaeI GCATGC 1 cut(s) 207
PctI GAATGC 1 cut(s) 50
PfeI GAWTC 1 cut(s) 336
PflMI CCANNNNNTGG 1 cut(s) 27
PleI GAGTC 1 cut(s) 226
PpsI GAGTC 1 cut(s) 226
Psp6I CCWGG 1 cut(s) 20
PspGI CCWGG 1 cut(s) 20
SaqAI TTAA 1 cut(s) 108
Sau3AI GATC 1 cut(s) 177
SchI GAGTC 1 cut(s) 227
ScrFI CCNGG 1 cut(s) 22
SetI ASST 4 cut(s) 26, 187, 192, 278
SmlI CTYRAG 1 cut(s) 271
SmoI CTYRAG 1 cut(s) 271
SphI GCATGC 1 cut(s) 207
Sse9I AATT 6 cut(s) 8, 64, 123, 194, 212, 345
StyD4I CCNGG 1 cut(s) 20
TaaI ACNGT 1 cut(s) 79
TasI AATT 6 cut(s) 8, 64, 123, 194, 212, 345
TfiI GAWTC 1 cut(s) 336
Tru1I TTAA 1 cut(s) 108
Tru9I TTAA 1 cut(s) 108
TspDTI ATGAA 3 cut(s) 185, 257, 319
Van91I CCANNNNNTGG 1 cut(s) 27
XapI RAATTY 3 cut(s) 64, 194, 345
XceI RCATGY 2 cut(s) 149, 207
Zsp2I ATGCAT 1 cut(s) 132
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.