Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0004985

Physical Location & Seq

Genomic Coordinates Reverse (-)

28609755 .. 28614154

Gene Structure 4400 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g27710.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2199 bp

ATGGGGGATAGATGGAACCCTCTCGGGTTCCCGTTGCTATCTCTCCTGGTTTTGATTTTTGTTTTGAGGTTTCGGGGCTGTTGGTGTCTCAATGATGAAGGATTGATTCTGTTGTCATTCCGTGAAAATATCAAGTTCGATCCTTTTGGTGCTTTGGAGAATTGGAGTCCTAACGATGGCGATCCTTGCCCGTGGAATGGTGTTCATTGTGTGGACGGTAAAGTGCATATGCTGAATCTGACGGATTTTTCTCTGGAAGGGACATTGGTACCTGAACTTTGGAAACTTAATCACTTAAGATCTCTTGTGTTATACAAGAATCGTTTATCTGGTGTAATTCCTAAAGAGATTGGGGGGCTCACAAGGTTGGAGCTGCTGGATTTGAGGAACAATAACTTGAATGGGATGATTCCAGTTGAGTTAGGCAGTATGCTGTCACTGAAATGCTTGATGCTTTGTGACAATAGATTCGAAGGCACCATTCCTCTAGAGCTCACTCGTCTCAGCACACTCTGCGAATTGCAATTTGATGATTACCTTTCATCTAGTGAAACCACTGGATTTGGCTGTGTGAACAGAAAGTTTGGCCATTGGTATAATACTGTTTACACATACAAATCACTCCCCATCTGGCAGAGCAATTTAGAACATGTGAATACTGTGGAATCCTTGGTATTATTTCTTAAAGGAGCTTTTAAGAACTATCTCAACTACTTGTCACTGCCTCGGTTCAGTTACAGAAAGGATCCTCTGCCAAATGATGGAGATAATTGCTGTGATAGTTTATCTAGTTTTTTTGAGTCACACATGGCCTTTGCTCGCCGTAGACTACTTGCACAGGCCAGTAACCTACCAGCTGTACCCGTTACTGATACGGATCCAACTGGACAGGTCATTGCTCTTCCAACTACCCGAAGTAGTGGTGCTTTCCCAGCCGTGCCAAAAGATAAAAAGAAAAATTCTCCTCCGCCTGCACCTGCACCGCAGCCTTCGCCTGAACCTCACGAGGCTTCAAAACATGACGGACAATCTTCCCAAAAATCAAATGGCAATATGTGGAAGTATCTCATTATTGGTTTCAGTGTGCTTATCTTGCTCCTTGTTCTTATGGCCATGGTCTTCATGTGTCGAAGCCAAGTGGCTAAAACTGTAGGTCCCTGGAAGACTGGATTGAGTGGGCAGTTGCAGAAAGCATTTATATCAGGAGTTCCCAAGTTGAACCGATCAGAACTGGAAACCGCATGTGAAGATTTCAGTAACATTATTAGCACACTTGAAGGTTGCATTGTGTACAAGGGAACATTGTCCAGTGGAGTTGAGATTGCTGTTGCATCAACTACAATATCGTCTTTGAAAGACTGGTCCAAGCTTGCAGAGAATTGTTACCGAAAAAAGATTGACGTACTGTCACGCGTGAATCATAAGAACTTTGTCAATCTTATTGGCTACTGTGAGGAGGATGAACCCTTTACTAGGATGATGGTGTTTGAGTATGCTCCAAATGGAAATCTCTTTGAGCATCTGCATATTGAAGAAATGGAACATCTGGATTGGAATTCGAGGATTAGGATCGTTATGGGAACTGCTTATTGTCTACAGTACATGCACCATGAGCTAAATCCTCCTGTGTCACATCCTAACCTGACCTCGGCTTCTATCTTTTTGACTGATGATTACGCTGCTAAGATTGCGGAGATCTGTTTCTGGGCAGAATCAATACGAAAGCCTAAGAATTCCGGCGATGATGATAAGGAGCATTCGGTATTGCCACCCCTTGCTGATCCAGAAACAAATGTCTACAGTTTCGGAGTAATGCTGCTTGAAATCATCACCGGGAAGCTCCAAAACTCAGAAGAACATGGGTCCCTTCTATACTGGGCCTCTGCATATCTGAATGAGAATCGAAGCGACATGGTGGATCGAACCCTCAAGTCGTTCAAAAACGAAGAGCTGGATGTCCTGTGCGAGGTCATCAAAGATTGCATCCAAGAAGATCCAAGGCAGAGACCAACAATGAAGGATGTGACTAACAAACTGAGGGAAGTGATCCCCATCACTCCCAACCAAGCAGTCCCCAGACTCTCTCCCCTCTGGTGGGCGGAACTCGATCGATCTTATCGGTCGAGGCAACATAAACCGGAAATCTCTCTCCTTCTGACTCTCGTCTCTGTTTCTTGTGTTGTAAGCCAAAAGTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0008150 GO:0008152 GO:0009653 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0012505 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0021700 GO:0022622 GO:0023052 GO:0030154 GO:0032501 GO:0032502 GO:0036211 GO:0038023 GO:0042995 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048364 GO:0048468 GO:0048469 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071695 GO:0071704 GO:0071944 GO:0090406 GO:0090558 GO:0090627 GO:0099402 GO:0120025 GO:0140096 GO:1901564 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase_Tyr

Protein Analysis

733

Amino Acids

82.68

Weight (kDa)

6.03

Isoelectric Point (pI)

41.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	30 - 70	1.4e-11	Leucine rich repeat N-terminal domain
LRR_14	PF23598	77 - 182	3.2e-09	Leucine-rich repeat region
LRR_8	PF13855	98 - 156	9.3e-06	Leucine rich repeat
PK_Tyr_Ser-Thr	PF07714	430 - 679	1.9e-19	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	431 - 677	4.4e-14	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004985)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18640 AT5G45840 AT5G45840
fragaria_vesca	FvH4_3g07660 FvH4_3g07660 FvH4_3g07660 FvH4_3g07660 FvH4_3g07660 FvH4_3g07660
malus_domestica	MD05G1299200.v1.1 MD10G1278700.v1.1
prunus_persica	Prupe.4G062600_v2.0.a1 Prupe.4G062600_v2.0.a1 Prupe.4G062600_v2.0.a1 Prupe.4G062600_v2.0.a1
pyrus_communis	pycom05g27710 pycom10g23270
rosa_chinensis	RchiOBHm_Chr5g0011021
rosa_laevigata	RLG00000031803
rosa_roxburghii	Rroxscaffold_1G00065380
rosa_rugosa	Rorug04G0454500 Rorug04G0454600 Rorug04G0454600 Rorug04G0454600
rosa_samantha	Rh5AG086800 Rh5BG081400 Rh5CG094200 Rh5DG081300
rosa_wichuraiana	Rw0G000120 Rw0G017830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	985
Acc36I	ACCTGC	1 cut(s)	985
Acc65I	GGTACC	1 cut(s)	268
AccB1I	GGYRCC	2 cut(s)	268, 476
AccB7I	CCANNNNNTGG	1 cut(s)	761
AccI	GTMKAC	3 cut(s)	826, 1594, 1797
AccII	CGCG	1 cut(s)	1413
AciI	CCGC	5 cut(s)	968, 983, 1239, 1691, 2099
AcoI	YGGCCR	2 cut(s)	586, 1110
AcsI	RAATTY	3 cut(s)	958, 1555, 1732
AfaI	GTAC	5 cut(s)	270, 861, 1292, 1404, 1601
AfiI	CCNNNNNNNGG	8 cut(s)	176, 197, 761, 1473, 1648, 1966, 2094, 2095
AflII	CTTAAG	1 cut(s)	295
AflIII	ACRYGT	2 cut(s)	649, 1411
AgsI	TTSAA	8 cut(s)	400, 1014, 1219, 1277, 1354, 1532, 1823, 1939
AhdI	GACNNNNNGTC	1 cut(s)	1405
AjnI	CCWGG	2 cut(s)	45, 1157
AluBI	AGCT	8 cut(s)	373, 493, 692, 857, 1369, 1615, 1840, 1951
AluI	AGCT	8 cut(s)	373, 493, 692, 857, 1369, 1615, 1840, 1951
Alw21I	GWGCWC	1 cut(s)	495
Alw26I	GTCTC	4 cut(s)	92, 506, 1999, 2170
Ama87I	CYCGRG	1 cut(s)	23
AoxI	GGCC	5 cut(s)	586, 810, 840, 1110, 1878
ApeKI	GCWGC	4 cut(s)	373, 985, 1679, 1816
ApoI	RAATTY	3 cut(s)	958, 1555, 1732
ArsI	GACNNNNNNTTYG	2 cut(s)	452, 484
Asp718I	GGTACC	1 cut(s)	268
AspS9I	GGNCC	4 cut(s)	1154, 1362, 1863, 1878
AsuC2I	CCSGG	1 cut(s)	1834
AsuHPI	GGTGA	1 cut(s)	1822
AsuII	TTCGAA	1 cut(s)	471
AvaI	CYCGRG	1 cut(s)	23
AvaII	GGWCC	3 cut(s)	1154, 1362, 1863
BaeI	ACNNNNGTAYC	2 cut(s)	252, 285
BalI	TGGCCA	2 cut(s)	588, 1112
BamHI	GGATCC	2 cut(s)	745, 877
BanI	GGYRCC	2 cut(s)	268, 476
BanII	GRGCYC	2 cut(s)	360, 495
BauI	CACGAG	1 cut(s)	1004
BbsI	GAAGAC	2 cut(s)	1111, 1169
Bbv12I	GWGCWC	1 cut(s)	495
BbvI	GCAGC	4 cut(s)	360, 997, 1666, 1803
BccI	CCATC	6 cut(s)	6, 170, 635, 755, 1474, 2060
BceAI	ACGGC	2 cut(s)	807, 920
BciT130I	CCWGG	2 cut(s)	47, 1159
BcnI	CCSGG	1 cut(s)	1834
BcoDI	GTCTC	4 cut(s)	92, 506, 1999, 2170
BfaI	CTAG	4 cut(s)	488, 546, 789, 1473
BfmI	CTRYAG	3 cut(s)	1149, 1595, 1798
BfrI	CTTAAG	1 cut(s)	295
BfuAI	ACCTGC	1 cut(s)	985
BglII	AGATCT	2 cut(s)	299, 1695
BisI	GCNGC	4 cut(s)	374, 986, 1680, 1817
BlsI	GCNGC	4 cut(s)	375, 987, 1681, 1818
Bme1390I	CCNGG	3 cut(s)	47, 1159, 1834
Bme18I	GGWCC	3 cut(s)	1154, 1362, 1863
BmeRI	GACNNNNNGTC	1 cut(s)	1405
BmeT110I	CYCGRG	1 cut(s)	23
BmgT120I	GGNCC	4 cut(s)	1154, 1362, 1863, 1878
BmiI	GGNNCC	9 cut(s)	17, 29, 270, 478, 747, 879, 1156, 1864, 1865
BmrFI	CCNGG	3 cut(s)	47, 1159, 1834
BmrI	ACTGGG	1 cut(s)	1885
BmsI	GCATC	4 cut(s)	441, 1340, 1528, 1992
BmuI	ACTGGG	1 cut(s)	1885
BoxI	GACNNNNGTC	1 cut(s)	2162
BpiI	GAAGAC	2 cut(s)	1111, 1169
Bpu14I	TTCGAA	1 cut(s)	471
BpuEI	CTTGAG	1 cut(s)	1913
BpuMI	CCSGG	1 cut(s)	1834
Bsa29I	ATCGAT	1 cut(s)	2110
BsaBI	GATNNNNATC	4 cut(s)	180, 876, 1568, 2051
BsaI	GGTCTC	1 cut(s)	1999
BsaJI	CCNNGG	7 cut(s)	191, 669, 725, 1113, 1157, 1647, 1997
BsaWI	WCCGGW	1 cut(s)	2137
Bsc4I	CCNNNNNNNGG	8 cut(s)	176, 197, 761, 1473, 1648, 1966, 2094, 2095
Bse1I	ACTGG	9 cut(s)	413, 562, 843, 889, 1171, 1236, 1308, 1364, 1880
Bse3DI	GCAATG	1 cut(s)	894
Bse8I	GATNNNNATC	4 cut(s)	180, 876, 1568, 2051
BseBI	CCWGG	2 cut(s)	47, 1159
BseCI	ATCGAT	1 cut(s)	2110
BseDI	CCNNGG	7 cut(s)	191, 669, 725, 1113, 1157, 1647, 1997
BseGI	GGATG	7 cut(s)	411, 1465, 1482, 1633, 1960, 1983, 2026
BseJI	GATNNNNATC	4 cut(s)	180, 876, 1568, 2051
BseLI	CCNNNNNNNGG	8 cut(s)	176, 197, 761, 1473, 1648, 1966, 2094, 2095
BseMI	GCAATG	1 cut(s)	894
BseMII	CTCAG	3 cut(s)	517, 1863, 2027
BseNI	ACTGG	9 cut(s)	413, 562, 843, 889, 1171, 1236, 1308, 1364, 1880
BseRI	GAGGAG	2 cut(s)	954, 1469
BseXI	GCAGC	4 cut(s)	360, 997, 1666, 1803
BseYI	CCCAGC	1 cut(s)	931
BsgI	GTGCAG	2 cut(s)	957, 963
Bsh1236I	CGCG	1 cut(s)	1413
Bsh1285I	CGRYCG	2 cut(s)	2110, 2123
BshFI	GGCC	5 cut(s)	588, 812, 842, 1112, 1880
BshNI	GGYRCC	2 cut(s)	268, 476
BshVI	ATCGAT	1 cut(s)	2110
BsiEI	CGRYCG	2 cut(s)	2110, 2123
BsiHKAI	GWGCWC	1 cut(s)	495
BsiHKCI	CYCGRG	1 cut(s)	23
BsiSI	CCGG	3 cut(s)	1737, 1833, 2138
BslFI	GGGAC	4 cut(s)	274, 1140, 1849, 2057
BslI	CCNNNNNNNGG	8 cut(s)	176, 197, 761, 1473, 1648, 1966, 2094, 2095
BsmAI	GTCTC	4 cut(s)	92, 506, 1999, 2170
BsmBI	CGTCTC	2 cut(s)	506, 2170
BsmFI	GGGAC	4 cut(s)	274, 1140, 1849, 2057
BsmI	GAATGC	1 cut(s)	1756
BsnI	GGCC	5 cut(s)	588, 812, 842, 1112, 1880
Bso31I	GGTCTC	1 cut(s)	1999
BsoBI	CYCGRG	1 cut(s)	23
Bsp119I	TTCGAA	1 cut(s)	471
Bsp1286I	GDGCHC	2 cut(s)	360, 495
Bsp1407I	TGTACA	1 cut(s)	1290
Bsp19I	CCATGG	1 cut(s)	1113
BspACI	CCGC	5 cut(s)	968, 983, 1239, 1691, 2099
BspANI	GGCC	5 cut(s)	588, 812, 842, 1112, 1880
BspCNI	CTCAG	3 cut(s)	516, 1862, 2028
BspDI	ATCGAT	1 cut(s)	2110
BspFNI	CGCG	1 cut(s)	1413
BspLI	GGNNCC	9 cut(s)	17, 29, 270, 478, 747, 879, 1156, 1864, 1865
BspMI	ACCTGC	1 cut(s)	985
BspQI	GCTCTTC	2 cut(s)	906, 1941
BspT104I	TTCGAA	1 cut(s)	471
BspT107I	GGYRCC	2 cut(s)	268, 476
BspTI	CTTAAG	1 cut(s)	295
BspTNI	GGTCTC	1 cut(s)	1999
BsrDI	GCAATG	1 cut(s)	894
BsrGI	TGTACA	1 cut(s)	1290
BsrI	ACTGG	9 cut(s)	413, 562, 843, 889, 1171, 1236, 1308, 1364, 1880
BssECI	CCNNGG	7 cut(s)	191, 669, 725, 1113, 1157, 1647, 1997
BssSI	CACGAG	1 cut(s)	1004
BssT1I	CCWWGG	3 cut(s)	669, 1113, 1997
Bst2BI	CACGAG	1 cut(s)	1004
Bst2UI	CCWGG	2 cut(s)	47, 1159
Bst4CI	ACNGT	8 cut(s)	218, 604, 661, 1150, 1407, 1451, 1599, 1802
Bst6I	CTCTTC	2 cut(s)	906, 1941
BstAFI	CTTAAG	1 cut(s)	295
BstAPI	GCANNNNNTGC	1 cut(s)	513
BstAUI	TGTACA	1 cut(s)	1290
BstBI	TTCGAA	1 cut(s)	471
BstC8I	GCNNGC	3 cut(s)	820, 972, 1371
BstDEI	CTNAG	5 cut(s)	503, 1683, 1728, 1849, 2036
BstDSI	CCRYGG	2 cut(s)	191, 1113
BstENI	CCTNNNNNAGG	2 cut(s)	1471, 1964
BstF5I	GGATG	7 cut(s)	411, 1465, 1482, 1633, 1960, 1983, 2026
BstFNI	CGCG	1 cut(s)	1413
BstMAI	GTCTC	4 cut(s)	92, 506, 1999, 2170
BstMCI	CGRYCG	2 cut(s)	2110, 2123
BstMWI	GCNNNNNNNGC	7 cut(s)	186, 513, 932, 991, 1093, 1612, 1688
BstNI	CCWGG	2 cut(s)	47, 1159
BstNSI	RCATGY	3 cut(s)	653, 1245, 1606
BstPAI	GACNNNNGTC	1 cut(s)	2162
BstSCI	CCNGG	3 cut(s)	45, 1157, 1832
BstSFI	CTRYAG	3 cut(s)	1149, 1595, 1798
BstUI	CGCG	1 cut(s)	1413
BstV1I	GCAGC	4 cut(s)	360, 997, 1666, 1803
BstV2I	GAAGAC	2 cut(s)	1111, 1169
BstX2I	RGATCY	5 cut(s)	299, 745, 877, 1695, 1993
BstYI	RGATCY	5 cut(s)	299, 745, 877, 1695, 1993
Bsu15I	ATCGAT	1 cut(s)	2110
BsuRI	GGCC	5 cut(s)	588, 812, 842, 1112, 1880
BsuTUI	ATCGAT	1 cut(s)	2110
BtgI	CCRYGG	2 cut(s)	191, 1113
BtgZI	GCGATG	1 cut(s)	1755
BtsCI	GGATG	7 cut(s)	411, 1465, 1482, 1633, 1960, 1983, 2026
BtsI	GCAGTG	1 cut(s)	719
BtsIMutI	CAGTG	5 cut(s)	437, 555, 719, 1087, 1315
BveI	ACCTGC	1 cut(s)	985
Cac8I	GCNNGC	3 cut(s)	820, 972, 1371
Cfr13I	GGNCC	4 cut(s)	1154, 1362, 1863, 1878
ClaI	ATCGAT	1 cut(s)	2110
Csp6I	GTAC	5 cut(s)	269, 860, 1291, 1403, 1600
CspCI	CAANNNNNGTGG	2 cut(s)	544, 579
CviQI	GTAC	5 cut(s)	269, 860, 1291, 1403, 1600
DdeI	CTNAG	5 cut(s)	503, 1683, 1728, 1849, 2036
DriI	GACNNNNNGTC	1 cut(s)	1405
EaeI	YGGCCR	2 cut(s)	586, 1110
Eam1104I	CTCTTC	2 cut(s)	906, 1941
Eam1105I	GACNNNNNGTC	1 cut(s)	1405
EarI	CTCTTC	2 cut(s)	906, 1941
EciI	GGCGGA	2 cut(s)	957, 2114
Ecl136II	GAGCTC	1 cut(s)	493
Eco130I	CCWWGG	3 cut(s)	669, 1113, 1997
Eco24I	GRGCYC	2 cut(s)	360, 495
Eco31I	GGTCTC	1 cut(s)	1999
Eco47I	GGWCC	3 cut(s)	1154, 1362, 1863
Eco53kI	GAGCTC	1 cut(s)	493
Eco88I	CYCGRG	1 cut(s)	23
EcoICRI	GAGCTC	1 cut(s)	493
EcoNI	CCTNNNNNAGG	2 cut(s)	1471, 1964
EcoO109I	RGGNCCY	2 cut(s)	1154, 1863
EcoRI	GAATTC	2 cut(s)	1555, 1732
EcoRII	CCWGG	2 cut(s)	45, 1157
EcoT14I	CCWWGG	3 cut(s)	669, 1113, 1997
EcoT38I	GRGCYC	2 cut(s)	360, 495
ErhI	CCWWGG	3 cut(s)	669, 1113, 1997
Esp3I	CGTCTC	2 cut(s)	506, 2170
FaqI	GGGAC	4 cut(s)	274, 1140, 1849, 2057
FauNDI	CATATG	1 cut(s)	228
FblI	GTMKAC	3 cut(s)	826, 1594, 1797
Fnu4HI	GCNGC	4 cut(s)	374, 986, 1680, 1817
FokI	GGATG	7 cut(s)	418, 1472, 1489, 1620, 1967, 1970, 2033
FriOI	GRGCYC	2 cut(s)	360, 495
Fsp4HI	GCNGC	4 cut(s)	374, 986, 1680, 1817
FspBI	CTAG	4 cut(s)	488, 546, 789, 1473
GluI	GCNGC	4 cut(s)	374, 986, 1680, 1817
GsaI	CCCAGC	1 cut(s)	935
HaeIII	GGCC	5 cut(s)	588, 812, 842, 1112, 1880
HapII	CCGG	3 cut(s)	1737, 1833, 2138
HindIII	AAGCTT	1 cut(s)	1367
HpaII	CCGG	3 cut(s)	1737, 1833, 2138
HphI	GGTGA	1 cut(s)	1822
Hpy166II	GTNNAC	7 cut(s)	214, 574, 607, 827, 1291, 1595, 1798
Hpy188I	TCNGA	6 cut(s)	240, 1228, 1808, 1852, 1893, 2157
Hpy188III	TCNNGA	6 cut(s)	254, 488, 1004, 1203, 1547, 1784
Hpy8I	GTNNAC	7 cut(s)	214, 574, 607, 827, 1291, 1595, 1798
HpyAV	CCTTC	8 cut(s)	92, 251, 467, 999, 1271, 1877, 2011, 2162
HpyCH4III	ACNGT	8 cut(s)	218, 604, 661, 1150, 1407, 1451, 1599, 1802
HpyCH4IV	ACGT	1 cut(s)	1401
HpyF10VI	GCNNNNNNNGC	7 cut(s)	186, 513, 932, 991, 1093, 1612, 1688
HpyF3I	CTNAG	5 cut(s)	503, 1683, 1728, 1849, 2036
HpySE526I	ACGT	1 cut(s)	1401
KflI	GGGWCCC	1 cut(s)	1863
KpnI	GGTACC	1 cut(s)	272
LguI	GCTCTTC	2 cut(s)	906, 1941
LmnI	GCTCC	6 cut(s)	370, 689, 1101, 1501, 1753, 1845
Lsp1109I	GCAGC	4 cut(s)	360, 997, 1666, 1803
LweI	GCATC	4 cut(s)	441, 1340, 1528, 1992
MaeI	CTAG	4 cut(s)	488, 546, 789, 1473
MaeII	ACGT	1 cut(s)	1401
MboII	GAAGA	9 cut(s)	893, 1023, 1111, 1174, 1259, 1544, 1865, 1958, 2003
MflI	RGATCY	5 cut(s)	299, 745, 877, 1695, 1993
MhlI	GDGCHC	2 cut(s)	360, 495
MlsI	TGGCCA	2 cut(s)	588, 1112
MluI	ACGCGT	1 cut(s)	1411
MluNI	TGGCCA	2 cut(s)	588, 1112
MlyI	GAGTC	4 cut(s)	175, 809, 2073, 2152
MmeI	TCCRAC	3 cut(s)	348, 905, 929
Mox20I	TGGCCA	2 cut(s)	588, 1112
MscI	TGGCCA	2 cut(s)	588, 1112
MseI	TTAA	5 cut(s)	288, 296, 684, 696, 2197
MslI	CAYNNNNRTG	1 cut(s)	442
Msp20I	TGGCCA	2 cut(s)	588, 1112
MspA1I	CMGCKG	1 cut(s)	857
MspCI	CTTAAG	1 cut(s)	295
MspI	CCGG	3 cut(s)	1737, 1833, 2138
MspR9I	CCNGG	3 cut(s)	47, 1159, 1834
Mva1269I	GAATGC	1 cut(s)	1756
MvaI	CCWGG	2 cut(s)	47, 1159
MvnI	CGCG	1 cut(s)	1413
MwoI	GCNNNNNNNGC	7 cut(s)	186, 513, 932, 991, 1093, 1612, 1688
NciI	CCSGG	1 cut(s)	1834
NcoI	CCATGG	1 cut(s)	1113
NdeI	CATATG	1 cut(s)	228
NlaIV	GGNNCC	9 cut(s)	17, 29, 270, 478, 747, 879, 1156, 1864, 1865
NmeAIII	GCCGAG	1 cut(s)	1628
NmuCI	GTSAC	7 cut(s)	435, 458, 717, 801, 1407, 1629, 2023
NspI	RCATGY	3 cut(s)	653, 1245, 1606
NspV	TTCGAA	1 cut(s)	471
PaqCI	CACCTGC	1 cut(s)	985
PciI	ACATGT	1 cut(s)	649
PciSI	GCTCTTC	2 cut(s)	906, 1941
PctI	GAATGC	1 cut(s)	1756
PfeI	GAWTC	9 cut(s)	106, 235, 319, 409, 468, 665, 1417, 1712, 1900
PflMI	CCANNNNNTGG	1 cut(s)	761
PkrI	GCNGC	4 cut(s)	375, 987, 1681, 1818
Ple19I	CGATCG	1 cut(s)	2110
PleI	GAGTC	4 cut(s)	174, 808, 2073, 2152
PpsI	GAGTC	4 cut(s)	174, 808, 2073, 2152
PpuMI	RGGWCCY	2 cut(s)	1154, 1863
PscI	ACATGT	1 cut(s)	649
PshAI	GACNNNNGTC	1 cut(s)	2162
Psp124BI	GAGCTC	1 cut(s)	495
Psp5II	RGGWCCY	2 cut(s)	1154, 1863
Psp6I	CCWGG	2 cut(s)	45, 1157
PspFI	CCCAGC	1 cut(s)	931
PspGI	CCWGG	2 cut(s)	45, 1157
PspN4I	GGNNCC	9 cut(s)	17, 29, 270, 478, 747, 879, 1156, 1864, 1865
PspPI	GGNCC	4 cut(s)	1154, 1362, 1863, 1878
PspPPI	RGGWCCY	2 cut(s)	1154, 1863
PsuI	RGATCY	5 cut(s)	299, 745, 877, 1695, 1993
PvuI	CGATCG	1 cut(s)	2110
PvuII	CAGCTG	1 cut(s)	857
RsaI	GTAC	5 cut(s)	270, 861, 1292, 1404, 1601
RsaNI	GTAC	5 cut(s)	269, 860, 1291, 1403, 1600
RseI	CAYNNNNRTG	1 cut(s)	442
SacI	GAGCTC	1 cut(s)	495
SapI	GCTCTTC	2 cut(s)	906, 1941
SaqAI	TTAA	5 cut(s)	288, 296, 684, 696, 2197
SatI	GCNGC	4 cut(s)	374, 986, 1680, 1817
Sau96I	GGNCC	4 cut(s)	1154, 1362, 1863, 1878
SchI	GAGTC	4 cut(s)	175, 809, 2073, 2152
ScrFI	CCNGG	3 cut(s)	47, 1159, 1834
SduI	GDGCHC	2 cut(s)	360, 495
SfaNI	GCATC	4 cut(s)	441, 1340, 1528, 1992
SfcI	CTRYAG	3 cut(s)	1149, 1595, 1798
SfuI	TTCGAA	1 cut(s)	471
SinI	GGWCC	3 cut(s)	1154, 1362, 1863
SmiMI	CAYNNNNRTG	1 cut(s)	442
SmlI	CTYRAG	2 cut(s)	295, 1928
SmoI	CTYRAG	2 cut(s)	295, 1928
SsiI	CCGC	5 cut(s)	968, 983, 1239, 1691, 2099
SspMI	CTAG	4 cut(s)	488, 546, 789, 1473
SstI	GAGCTC	1 cut(s)	495
StyD4I	CCNGG	3 cut(s)	45, 1157, 1832
StyI	CCWWGG	3 cut(s)	669, 1113, 1997
TaaI	ACNGT	8 cut(s)	218, 604, 661, 1150, 1407, 1451, 1599, 1802
TaiI	ACGT	1 cut(s)	1404
TaqI	TCGA	9 cut(s)	138, 471, 1129, 1559, 1903, 1921, 2106, 2110, 2123
TaqII	GACCGA	1 cut(s)	2109
TatI	WGTACW	2 cut(s)	1290, 1599
TfiI	GAWTC	9 cut(s)	106, 235, 319, 409, 468, 665, 1417, 1712, 1900
Tru1I	TTAA	5 cut(s)	288, 296, 684, 696, 2197
Tru9I	TTAA	5 cut(s)	288, 296, 684, 696, 2197
TscAI	CASTG	5 cut(s)	444, 562, 726, 1087, 1315
TseFI	GTSAC	7 cut(s)	435, 458, 717, 801, 1407, 1629, 2023
TseI	GCWGC	4 cut(s)	373, 985, 1679, 1816
Tsp45I	GTSAC	7 cut(s)	435, 458, 717, 801, 1407, 1629, 2023
TspDTI	ATGAA	6 cut(s)	111, 194, 531, 1111, 1476, 2030
TspGWI	ACGGA	4 cut(s)	110, 257, 890, 1038
TspRI	CASTG	5 cut(s)	444, 562, 726, 1087, 1315
Van91I	CCANNNNNTGG	1 cut(s)	761
Vha464I	CTTAAG	1 cut(s)	295
VpaK11BI	GGWCC	3 cut(s)	1154, 1362, 1863
XagI	CCTNNNNNAGG	2 cut(s)	1471, 1964
XapI	RAATTY	3 cut(s)	958, 1555, 1732
XbaI	TCTAGA	1 cut(s)	487
XceI	RCATGY	3 cut(s)	653, 1245, 1606
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1043
XmiI	GTMKAC	3 cut(s)	826, 1594, 1797
XspI	CTAG	4 cut(s)	488, 546, 789, 1473

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.