pycom06g00790
ERF Family

Belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
OG0013788
Physical Location & Seq
Reverse (-)
735308 .. 741570
6263 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g00790.2

Sequence Viewer

Length: 1368 bp
ATGGGAATCTGTTTTGGAGCTCCTGTCAATCATAGTTCGGCATCTACAACCAAACCGGCTACCCTAGTAGCATCGAGATACATTAACAAGAACAATGGATTCGTAGGAAAAGGTGTCAGCACCAAAAAAGTTCCCAGGAATATTAGTGGCAAAAGAAGTACTGGTGGAACAACGGAGAGAAGGGATAGCAAGGCACAAGTGATATTAAGCAAACGCAGCAGCAGAAAGAATTATACTGAAGCAGCTGGAGGTGTGGCTCTTCCTCTTCCTCCTGCTGCGGCAGCAAAAGCTGCTCCAATTGAATGTTTACCAAAGTTGAAAGAGTTCACGTTAGCAGAACTGAAGAAGTGTACTGGAGATTTTCGACCAGATACAATACTAGGTGAGGGAGGTTTCGGAAGGGTTTTCAAGGGCTGGGTCGATCCCGTCACATATGCCCCGTCTAAGGTCGGCGTTGGCTTGGCCGTCGCAGTCAAGAAGTCCAGCGAAGACAGCTATCAAGGTCACCAAGAATGGCAGGCGGAGGTTAATTTTTTGGGGAAGTGTCATCATCCAAACCTTGTGAGGCTGCTGGGACATTGCTGTGAAGAAAGCCAATTCCTTCTTGTCTACGAATATATGCCGAAAGGCAGCTTGGAAGGCCACCTTTTCAGAAAAGGTCAACAACCACTTCCATGGGAAATAAGACTAAAGATAGCAATTGGAGCTGCGCGAGGCCTTGTCTTTTTGCACACCTCAGAAAAAGTCATCTACCGTGACTTTAAGGCCTCCAATATTTTGCTCGATCCTGCCTACAACGCAAAACTTTCAGATTTTGGGCTGGTGAAGACAGGGCCGATGAATGGAAACTCCCATGTAACCACGCGGATTATTGGAACTCAGGGATATGCAGCTCCAGAATATGTCGCAACCGGGCACTTGTACGTAAAGAGCGACGTGTATGGTTTCGGTGTCGTATTGTTGGAGATGCTAACGGGATTACCGGCAGTTGACAGTAATCGGCCATCTTGCGTGTACAGTTTGGTAGATTGGGCGAGGCCGTCGCTTCACAAGAAAAAGTGGCTGAAGAAGATAATGGACCCAGGGCTTGGCGAGGAATACTCGTTAAAAGGTGCCTTCCAAGCGGCTGAGCTTATTCTCAAATGCCTAGAACCTGATCCTAAAAGCAGACCTTCCATGGAAGAGGTTTTGACAGTTCTGGAGAAGATTAACGACATTAAGAAGAAACCAAAATGTACAAAATCCAATGGGAGACGACATGATCAGGAACCATATTCTTCAGCACATAACCATCATAGTAGTAACAGGTCTCCATATCACCAAAAGAATGGCGGTGTTAGAGCAAGTTCTCAACATCGTCTGTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

456

Amino Acids

49.95

Weight (kDa)

9.6

Isoelectric Point (pI)

41.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013788)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76360
fragaria_vesca FvH4_5g25310
malus_domestica MD06G1009600.v1.1 MD16G1285000.v1.1
prunus_persica Prupe.5G010900_v2.0.a1
pyrus_communis pycom06g00790 pycom16g25930
rosa_chinensis RchiOBHm_Chr7g0215531
rosa_laevigata RLG00000002650
rosa_multiflora Rmu_sc0000898.1_g000098
rosa_roxburghii Rroxscaffold_3G00244160
rosa_rugosa Rorug07G0154700
rosa_samantha Rh7AG290800 Rh7BG282900 Rh7CG310700 Rh7DG294400
rosa_wichuraiana Rw7G024810

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1112
AccB7I CCANNNNNTGG 1 cut(s) 1088
AccI GTMKAC 1 cut(s) 609
AccII CGCG 2 cut(s) 712, 865
AciI CCGC 5 cut(s) 278, 521, 865, 1124, 1332
AclWI GGATC 3 cut(s) 416, 779, 1151
AcoI YGGCCR 2 cut(s) 462, 1001
AcuI CTGAAG 4 cut(s) 258, 362, 1085, 1263
AfaI GTAC 6 cut(s) 160, 352, 923, 1016, 1237, 1364
AfiI CCNNNNNNNGG 3 cut(s) 445, 842, 1088
AflIII ACRYGT 1 cut(s) 936
AgsI TTSAA 3 cut(s) 302, 319, 409
AjiI CACGTC 1 cut(s) 937
AjnI CCWGG 2 cut(s) 134, 1081
AjuI GAANNNNNNNTTGG 2 cut(s) 617, 649
AluBI AGCT 8 cut(s) 20, 245, 290, 495, 633, 707, 893, 1132
AluI AGCT 8 cut(s) 20, 245, 290, 495, 633, 707, 893, 1132
Alw21I GWGCWC 1 cut(s) 22
Alw26I GTCTC 2 cut(s) 1246, 1314
AlwI GGATC 3 cut(s) 416, 779, 1151
AoxI GGCC 7 cut(s) 462, 640, 715, 765, 833, 1001, 1037
Asp700I GAANNNNTTC 1 cut(s) 323
AspLEI GCGC 1 cut(s) 712
AspS9I GGNCC 2 cut(s) 833, 1078
AsuC2I CCSGG 1 cut(s) 913
AsuHPI GGTGA 4 cut(s) 395, 497, 835, 1310
AvaII GGWCC 1 cut(s) 1078
BaeGI GKGCMC 1 cut(s) 918
BanI GGYRCC 1 cut(s) 1112
BanII GRGCYC 1 cut(s) 22
BbsI GAAGAC 2 cut(s) 495, 833
Bbv12I GWGCWC 1 cut(s) 22
BccI CCATC 2 cut(s) 1012, 1299
BceAI ACGGC 2 cut(s) 449, 1024
BciT130I CCWGG 2 cut(s) 136, 1083
BclI TGATCA 1 cut(s) 1261
BcnI CCSGG 1 cut(s) 913
BcoDI GTCTC 2 cut(s) 1246, 1314
BfaI CTAG 3 cut(s) 65, 380, 1148
BlpI GCTNAGC 1 cut(s) 1128
BmcAI AGTACT 1 cut(s) 160
Bme1390I CCNGG 3 cut(s) 136, 913, 1083
Bme18I GGWCC 1 cut(s) 1078
BmgBI CACGTC 1 cut(s) 937
BmgT120I GGNCC 2 cut(s) 833, 1078
BmiI GGNNCC 3 cut(s) 1080, 1114, 1269
BmrFI CCNGG 3 cut(s) 136, 913, 1083
BmsI GCATC 3 cut(s) 50, 80, 957
BpiI GAAGAC 2 cut(s) 495, 833
BplI GAGNNNNNCTC 2 cut(s) 1085, 1117
BpmI CTGGAG 4 cut(s) 267, 375, 879, 1220
Bpu1102I GCTNAGC 1 cut(s) 1128
BpuMI CCSGG 1 cut(s) 913
BsaAI YACGTR 1 cut(s) 925
BsaI GGTCTC 1 cut(s) 1314
BsaJI CCNNGG 5 cut(s) 134, 674, 1081, 1082, 1176
BsaXI ACNNNNNCTCC 2 cut(s) 9, 39
Bsc4I CCNNNNNNNGG 3 cut(s) 445, 842, 1088
Bse118I RCCGGY 2 cut(s) 55, 982
Bse1I ACTGG 2 cut(s) 166, 358
Bse3DI GCAATG 1 cut(s) 577
BseBI CCWGG 2 cut(s) 136, 1083
BseDI CCNNGG 5 cut(s) 134, 674, 1081, 1082, 1176
BseGI GGATG 1 cut(s) 550
BseLI CCNNNNNNNGG 3 cut(s) 445, 842, 1088
BseMI GCAATG 1 cut(s) 577
BseMII CTCAG 3 cut(s) 750, 893, 1119
BseNI ACTGG 2 cut(s) 166, 358
BseSI GKGCMC 1 cut(s) 918
BseYI CCCAGC 2 cut(s) 414, 571
Bsh1236I CGCG 2 cut(s) 712, 865
BshFI GGCC 7 cut(s) 464, 642, 717, 767, 835, 1003, 1039
BshNI GGYRCC 1 cut(s) 1112
BsiHKAI GWGCWC 1 cut(s) 22
BsiSI CCGG 3 cut(s) 56, 912, 983
BslFI GGGAC 1 cut(s) 588
BslI CCNNNNNNNGG 3 cut(s) 445, 842, 1088
BsmAI GTCTC 2 cut(s) 1246, 1314
BsmBI CGTCTC 1 cut(s) 1246
BsmFI GGGAC 1 cut(s) 588
BsnI GGCC 7 cut(s) 464, 642, 717, 767, 835, 1003, 1039
Bso31I GGTCTC 1 cut(s) 1314
Bsp1286I GDGCHC 2 cut(s) 22, 918
Bsp1407I TGTACA 2 cut(s) 1014, 1235
Bsp143I GATC 4 cut(s) 421, 784, 1156, 1261
Bsp1720I GCTNAGC 1 cut(s) 1128
Bsp19I CCATGG 2 cut(s) 674, 1176
BspACI CCGC 5 cut(s) 278, 521, 865, 1124, 1332
BspANI GGCC 7 cut(s) 464, 642, 717, 767, 835, 1003, 1039
BspCNI CTCAG 3 cut(s) 749, 892, 1120
BspFNI CGCG 2 cut(s) 712, 865
BspLI GGNNCC 3 cut(s) 1080, 1114, 1269
BspPI GGATC 3 cut(s) 416, 779, 1151
BspQI GCTCTTC 1 cut(s) 264
BspT107I GGYRCC 1 cut(s) 1112
BspTNI GGTCTC 1 cut(s) 1314
BsrDI GCAATG 1 cut(s) 577
BsrFI RCCGGY 2 cut(s) 55, 982
BsrGI TGTACA 2 cut(s) 1014, 1235
BsrI ACTGG 2 cut(s) 166, 358
BssAI RCCGGY 2 cut(s) 55, 982
BssECI CCNNGG 5 cut(s) 134, 674, 1081, 1082, 1176
BssMI GATC 4 cut(s) 421, 784, 1156, 1261
BssT1I CCWWGG 2 cut(s) 674, 1176
Bst2UI CCWGG 2 cut(s) 136, 1083
Bst4CI ACNGT 4 cut(s) 755, 995, 1019, 1195
Bst6I CTCTTC 3 cut(s) 264, 270, 1176
BstAPI GCANNNNNTGC 1 cut(s) 290
BstAUI TGTACA 2 cut(s) 1014, 1235
BstBAI YACGTR 1 cut(s) 925
BstC8I GCNNGC 1 cut(s) 519
BstDEI CTNAG 4 cut(s) 444, 736, 879, 1128
BstDSI CCRYGG 2 cut(s) 674, 1176
BstEII GGTNACC 1 cut(s) 503
BstF5I GGATG 1 cut(s) 550
BstFNI CGCG 2 cut(s) 712, 865
BstHHI GCGC 1 cut(s) 712
BstKTI GATC 4 cut(s) 424, 787, 1159, 1264
BstMAI GTCTC 2 cut(s) 1246, 1314
BstMBI GATC 4 cut(s) 421, 784, 1156, 1261
BstMWI GCNNNNNNNGC 9 cut(s) 216, 281, 287, 290, 492, 639, 704, 797, 1121
BstNI CCWGG 2 cut(s) 136, 1083
BstPI GGTNACC 1 cut(s) 503
BstSCI CCNGG 3 cut(s) 134, 911, 1081
BstSLI GKGCMC 1 cut(s) 918
BstSNI TACGTA 1 cut(s) 925
BstUI CGCG 2 cut(s) 712, 865
BstV2I GAAGAC 2 cut(s) 495, 833
BstXI CCANNNNNNTGG 2 cut(s) 675, 1328
BsuRI GGCC 7 cut(s) 464, 642, 717, 767, 835, 1003, 1039
BtgI CCRYGG 2 cut(s) 674, 1176
BtrI CACGTC 1 cut(s) 937
BtsCI GGATG 1 cut(s) 550
Cac8I GCNNGC 1 cut(s) 519
CfoI GCGC 1 cut(s) 712
Cfr10I RCCGGY 2 cut(s) 55, 982
Cfr13I GGNCC 2 cut(s) 833, 1078
Csp6I GTAC 6 cut(s) 159, 351, 922, 1015, 1236, 1363
CviAII CATG 4 cut(s) 675, 854, 1177, 1259
CviQI GTAC 6 cut(s) 159, 351, 922, 1015, 1236, 1363
DdeI CTNAG 4 cut(s) 444, 736, 879, 1128
DpnI GATC 4 cut(s) 423, 786, 1158, 1263
DpnII GATC 4 cut(s) 421, 784, 1156, 1261
EaeI YGGCCR 2 cut(s) 462, 1001
Eam1104I CTCTTC 3 cut(s) 264, 270, 1176
EarI CTCTTC 3 cut(s) 264, 270, 1176
EciI GGCGGA 1 cut(s) 536
Ecl136II GAGCTC 1 cut(s) 20
Eco105I TACGTA 1 cut(s) 925
Eco130I CCWWGG 2 cut(s) 674, 1176
Eco147I AGGCCT 2 cut(s) 717, 767
Eco24I GRGCYC 1 cut(s) 22
Eco31I GGTCTC 1 cut(s) 1314
Eco47I GGWCC 1 cut(s) 1078
Eco53kI GAGCTC 1 cut(s) 20
Eco57I CTGAAG 4 cut(s) 258, 362, 1085, 1263
Eco91I GGTNACC 1 cut(s) 503
EcoICRI GAGCTC 1 cut(s) 20
EcoO65I GGTNACC 1 cut(s) 503
EcoRII CCWGG 2 cut(s) 134, 1081
EcoT14I CCWWGG 2 cut(s) 674, 1176
EcoT38I GRGCYC 1 cut(s) 22
ErhI CCWWGG 2 cut(s) 674, 1176
Esp3I CGTCTC 1 cut(s) 1246
FaeI CATG 4 cut(s) 678, 857, 1180, 1262
FalI AAGNNNNNCTT 4 cut(s) 630, 662, 1156, 1188
FaqI GGGAC 1 cut(s) 588
FatI CATG 4 cut(s) 674, 853, 1176, 1258
FauNDI CATATG 1 cut(s) 433
FbaI TGATCA 1 cut(s) 1261
FblI GTMKAC 1 cut(s) 609
FokI GGATG 1 cut(s) 537
FriOI GRGCYC 1 cut(s) 22
FspBI CTAG 3 cut(s) 65, 380, 1148
GlaI GCGC 1 cut(s) 711
GsaI CCCAGC 2 cut(s) 418, 575
GsuI CTGGAG 4 cut(s) 267, 375, 879, 1220
HaeIII GGCC 7 cut(s) 464, 642, 717, 767, 835, 1003, 1039
HapII CCGG 3 cut(s) 56, 912, 983
HhaI GCGC 1 cut(s) 712
Hin1II CATG 4 cut(s) 678, 857, 1180, 1262
Hin6I GCGC 1 cut(s) 710
HinP1I GCGC 1 cut(s) 710
HincII GTYRAC 2 cut(s) 662, 991
HindII GTYRAC 2 cut(s) 662, 991
HinfI GANTC 2 cut(s) 6, 99
HpaII CCGG 3 cut(s) 56, 912, 983
HphI GGTGA 4 cut(s) 395, 497, 835, 1310
Hpy166II GTNNAC 7 cut(s) 308, 327, 351, 610, 662, 991, 1015
Hpy188I TCNGA 4 cut(s) 398, 653, 739, 811
Hpy188III TCNNGA 5 cut(s) 75, 475, 896, 1199, 1265
Hpy8I GTNNAC 7 cut(s) 308, 327, 351, 610, 662, 991, 1015
Hpy99I CGWCG 3 cut(s) 470, 938, 1045
HpyAV CCTTC 6 cut(s) 174, 393, 611, 632, 1126, 1182
HpyCH4III ACNGT 4 cut(s) 755, 995, 1019, 1195
HpyCH4IV ACGT 3 cut(s) 329, 924, 936
HpyCH4V TGCA 2 cut(s) 730, 890
HpyF10VI GCNNNNNNNGC 9 cut(s) 216, 281, 287, 290, 492, 639, 704, 797, 1121
HpyF3I CTNAG 4 cut(s) 444, 736, 879, 1128
HpySE526I ACGT 3 cut(s) 329, 924, 936
Hsp92II CATG 4 cut(s) 678, 857, 1180, 1262
HspAI GCGC 1 cut(s) 710
Ksp22I TGATCA 1 cut(s) 1261
Kzo9I GATC 4 cut(s) 421, 784, 1156, 1261
LguI GCTCTTC 1 cut(s) 264
LmnI GCTCC 5 cut(s) 17, 25, 298, 704, 898
LweI GCATC 3 cut(s) 50, 80, 957
MaeI CTAG 3 cut(s) 65, 380, 1148
MaeII ACGT 3 cut(s) 329, 924, 936
MaeIII GTNAC 5 cut(s) 427, 503, 755, 856, 1301
MalI GATC 4 cut(s) 423, 786, 1158, 1263
MboI GATC 4 cut(s) 421, 784, 1156, 1261
MfeI CAATTG 2 cut(s) 297, 699
MhlI GDGCHC 2 cut(s) 22, 918
MluCI AATT 5 cut(s) 229, 297, 529, 596, 699
MmeI TCCRAC 1 cut(s) 942
MroXI GAANNNNTTC 1 cut(s) 323
MseI TTAA 7 cut(s) 84, 206, 528, 762, 1106, 1209, 1218
MslI CAYNNNNRTG 2 cut(s) 582, 673
MspA1I CMGCKG 1 cut(s) 245
MspI CCGG 3 cut(s) 56, 912, 983
MspR9I CCNGG 3 cut(s) 136, 913, 1083
MunI CAATTG 2 cut(s) 297, 699
MvaI CCWGG 2 cut(s) 136, 1083
MvnI CGCG 2 cut(s) 712, 865
MwoI GCNNNNNNNGC 9 cut(s) 216, 281, 287, 290, 492, 639, 704, 797, 1121
NciI CCSGG 1 cut(s) 913
NcoI CCATGG 2 cut(s) 674, 1176
NdeI CATATG 1 cut(s) 433
NdeII GATC 4 cut(s) 421, 784, 1156, 1261
NlaIII CATG 4 cut(s) 678, 857, 1180, 1262
NlaIV GGNNCC 3 cut(s) 1080, 1114, 1269
NmuCI GTSAC 3 cut(s) 427, 503, 755
PasI CCCWGGG 1 cut(s) 1082
PceI AGGCCT 2 cut(s) 717, 767
PciSI GCTCTTC 1 cut(s) 264
PcsI WCGNNNNNNNCGW 1 cut(s) 930
PdmI GAANNNNTTC 1 cut(s) 323
PfeI GAWTC 2 cut(s) 6, 99
PflMI CCANNNNNTGG 1 cut(s) 1088
Ppu21I YACGTR 1 cut(s) 925
Psp124BI GAGCTC 1 cut(s) 22
Psp6I CCWGG 2 cut(s) 134, 1081
PspEI GGTNACC 1 cut(s) 503
PspFI CCCAGC 2 cut(s) 414, 571
PspGI CCWGG 2 cut(s) 134, 1081
PspN4I GGNNCC 3 cut(s) 1080, 1114, 1269
PspPI GGNCC 2 cut(s) 833, 1078
PvuII CAGCTG 1 cut(s) 245
RsaI GTAC 6 cut(s) 160, 352, 923, 1016, 1237, 1364
RsaNI GTAC 6 cut(s) 159, 351, 922, 1015, 1236, 1363
RseI CAYNNNNRTG 2 cut(s) 582, 673
SacI GAGCTC 1 cut(s) 22
SapI GCTCTTC 1 cut(s) 264
SaqAI TTAA 7 cut(s) 84, 206, 528, 762, 1106, 1209, 1218
Sau3AI GATC 4 cut(s) 421, 784, 1156, 1261
Sau96I GGNCC 2 cut(s) 833, 1078
ScaI AGTACT 1 cut(s) 160
ScrFI CCNGG 3 cut(s) 136, 913, 1083
SduI GDGCHC 2 cut(s) 22, 918
SfaNI GCATC 3 cut(s) 50, 80, 957
SinI GGWCC 1 cut(s) 1078
SmiMI CAYNNNNRTG 2 cut(s) 582, 673
SnaBI TACGTA 1 cut(s) 925
Sse9I AATT 5 cut(s) 229, 297, 529, 596, 699
SseBI AGGCCT 2 cut(s) 717, 767
SsiI CCGC 5 cut(s) 278, 521, 865, 1124, 1332
SspI AATATT 2 cut(s) 142, 775
SspMI CTAG 3 cut(s) 65, 380, 1148
SstI GAGCTC 1 cut(s) 22
StuI AGGCCT 2 cut(s) 717, 767
StyD4I CCNGG 3 cut(s) 134, 911, 1081
StyI CCWWGG 2 cut(s) 674, 1176
TaaI ACNGT 4 cut(s) 755, 995, 1019, 1195
TaiI ACGT 3 cut(s) 332, 927, 939
TaqI TCGA 4 cut(s) 74, 364, 420, 783
TasI AATT 5 cut(s) 229, 297, 529, 596, 699
TatI WGTACW 5 cut(s) 158, 350, 1014, 1235, 1362
TauI GCSGC 2 cut(s) 281, 1127
TfiI GAWTC 2 cut(s) 6, 99
Tru1I TTAA 7 cut(s) 84, 206, 528, 762, 1106, 1209, 1218
Tru9I TTAA 7 cut(s) 84, 206, 528, 762, 1106, 1209, 1218
TseFI GTSAC 3 cut(s) 427, 503, 755
Tsp45I GTSAC 3 cut(s) 427, 503, 755
TspDTI ATGAA 1 cut(s) 854
TspGWI ACGGA 1 cut(s) 188
Van91I CCANNNNNTGG 1 cut(s) 1088
VpaK11BI GGWCC 1 cut(s) 1078
XmiI GTMKAC 1 cut(s) 609
XmnI GAANNNNTTC 1 cut(s) 323
XspI CTAG 3 cut(s) 65, 380, 1148
ZrmI AGTACT 1 cut(s) 160
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.