Rroxscaffold_3G00244160
ERF Family

Belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0013788
Physical Location & Seq
Forward (+)
36577415 .. 36582491
5077 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00244160.1

Sequence Viewer

Length: 1353 bp
ATGGGAAACTGTTTTGGAGCTCGTGTGAACAATCATACCAGCCTACCCTCCAGTAAGGCGCTTAGCCCGCCTGAAACAATGTTAGACATTAAAGGCAGCAAAAAAGATGGATTAGAAGATGGAAGAAGAAGAATGATCGACTCCAAGAAAGAGAGCAGTGAAATAGTGATCCCGAGAATTACTAATGTTAAAGATCGACAGAGAGCTGTAGCTGAGGAAAATAAGAAAAACTCAGAAACGGCAACTCATAAGCTTCCATGTCCCGATCCAAGTACTACCGGAAGGATCGTGAAGCCCAACTTGAAAGAGTTTACGTTTGCGGCGTTGAAGAAGGCGACCCGAGACTTTAAACCGGACACGATTCTTGGGGAGGGAGGTTTTGGGAGGGTTTTCAAGGGGTGGGTGGACGAGAACACGTACGCGCCGTCTAGGGCAGGCATCGGTATGGCCGTCGCCGTGAAGAAATCCAACCCTGATAGCTATCAAGGCCAGCAAGAATGGGAGGCGGAGGTCAATTTCTTGGGGAAGTATTTGCATCCAAACCTTGTTAGATTATTGGGATATTGTTGCGAGGAAGATCAATTTCTGCTTGTGTACGAGTACATGCAGAAAGGAAGCTTGGAAAACCATCTCTTCAGAAAAGGTCAAGAACCACTTTCATGGGATATAAGGCTTAAGATAGCAATCGGAGCTGCGCGAGGTCTTGCATTCTTGCACACCTCTGAAAAAGTCATCTACCGCGACTTCAAGGCCTCCAATATTTTGCTGGATCCGGACTACAATGCAAAACTTTCAGATTTCGGGTTGGCAAAGCTCGGACCAATAAATGGAAACTCGCACGTAACAACACGTATCATTGGTACTTATGGCTACGCAGCTCCGGAATATGTCGCAACCGGACATCTGTACGTAAAAAGCGACGTGTACGGTTTCGGCGTGGTGTTACTGGAGATGTTGACCGGAAGACGAGCTCTCGACACTAACAAACCGGCCGGTGAGACCAATTTGGTGGAGTGGGCCAGGCCTTCTCTTCTTAAGAAAAAAGAGCTGAAGAAGATGATGGACCCAAAGCTTGGAGATCAATACTCTATAAAAGGTGCATACCAAGCAGCTGAGCTTATTTACAAGTGCCTAGAATCTGATCCGAAAGACAGGCCATCCATGGTAGAAGTTTTGGTAGTTCTAGAGAGGGTCAATGCCGTTAAGGAGAAGGAGAAACCAAAAAGTACAATACTTAATGTCAGAAGACAAGAAGGAAGTTCAGCACGCCAACACCATTATAACTATCACAAGTCTCCAATTCACCAAAAGAATGGTGGCAATGGTGTAATTTCTCATGCTCGGCTACACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

450

Amino Acids

50.38

Weight (kDa)

9.36

Isoelectric Point (pI)

27.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 119 - 392 2.3e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 120 - 392 6.9e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013788)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76360
fragaria_vesca FvH4_5g25310
malus_domestica MD06G1009600.v1.1 MD16G1285000.v1.1
prunus_persica Prupe.5G010900_v2.0.a1
pyrus_communis pycom06g00790 pycom16g25930
rosa_chinensis RchiOBHm_Chr7g0215531
rosa_laevigata RLG00000002650
rosa_multiflora Rmu_sc0000898.1_g000098
rosa_roxburghii Rroxscaffold_3G00244160
rosa_rugosa Rorug07G0154700
rosa_samantha Rh7AG290800 Rh7BG282900 Rh7CG310700 Rh7DG294400
rosa_wichuraiana Rw7G024810

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1281
AccB7I CCANNNNNTGG 2 cut(s) 827, 1073
AccII CGCG 3 cut(s) 422, 697, 741
AccIII TCCGGA 2 cut(s) 772, 880
AciI CCGC 4 cut(s) 68, 320, 506, 739
AclWI GGATC 6 cut(s) 163, 260, 293, 764, 777, 1136
AcoI YGGCCR 2 cut(s) 447, 990
AcuI CTGAAG 2 cut(s) 619, 1070
AfaI GTAC 8 cut(s) 274, 419, 596, 602, 862, 908, 926, 1228
AfiI CCNNNNNNNGG 2 cut(s) 827, 1073
AflII CTTAAG 2 cut(s) 674, 1034
AflIII ACRYGT 3 cut(s) 414, 848, 921
AgsI TTSAA 4 cut(s) 304, 328, 394, 748
AjiI CACGTC 1 cut(s) 922
AjnI CCWGG 1 cut(s) 1019
AjuI GAANNNNNNNTTGG 2 cut(s) 602, 634
Alw21I GWGCWC 2 cut(s) 22, 973
Alw26I GTCTC 3 cut(s) 336, 992, 1299
AlwI GGATC 6 cut(s) 163, 260, 293, 764, 777, 1136
Ama87I CYCGRG 2 cut(s) 172, 339
Aor13HI TCCGGA 2 cut(s) 772, 880
AoxI GGCC 7 cut(s) 447, 487, 750, 990, 1017, 1022, 1154
ApeKI GCWGC 4 cut(s) 96, 692, 875, 1109
AspLEI GCGC 3 cut(s) 61, 424, 697
AspS9I GGNCC 3 cut(s) 818, 1017, 1063
AsuHPI GGTGA 2 cut(s) 1007, 1295
AvaI CYCGRG 2 cut(s) 172, 339
AvaII GGWCC 2 cut(s) 818, 1063
BamHI GGATCC 1 cut(s) 769
BanII GRGCYC 2 cut(s) 22, 973
BauI CACGAG 1 cut(s) 21
BbsI GAAGAC 2 cut(s) 970, 1252
Bbv12I GWGCWC 2 cut(s) 22, 973
BbvCI CCTCAGC 1 cut(s) 213
BbvI GCAGC 4 cut(s) 108, 679, 887, 1121
BccI CCATC 5 cut(s) 101, 113, 636, 1054, 1165
BceAI ACGGC 5 cut(s) 255, 409, 434, 440, 1184
BciT130I CCWGG 1 cut(s) 1021
BcoDI GTCTC 3 cut(s) 336, 992, 1299
BfaI CTAG 4 cut(s) 429, 1133, 1184, 1351
BfmI CTRYAG 1 cut(s) 207
BfoI RGCGCY 1 cut(s) 62
BfrI CTTAAG 2 cut(s) 674, 1034
BisI GCNGC 5 cut(s) 97, 321, 693, 876, 1110
BlpI GCTNAGC 2 cut(s) 62, 1113
BlsI GCNGC 5 cut(s) 98, 322, 694, 877, 1111
BmcAI AGTACT 1 cut(s) 274
Bme1390I CCNGG 1 cut(s) 1021
Bme18I GGWCC 2 cut(s) 818, 1063
BmeT110I CYCGRG 2 cut(s) 172, 339
BmgBI CACGTC 1 cut(s) 922
BmgT120I GGNCC 3 cut(s) 818, 1017, 1063
BmiI GGNNCC 2 cut(s) 771, 1065
BmrFI CCNGG 1 cut(s) 1021
BmsI GCATC 2 cut(s) 447, 544
BpiI GAAGAC 2 cut(s) 970, 1252
BpmI CTGGAG 2 cut(s) 34, 968
Bpu10I CCTNAGC 1 cut(s) 213
Bpu1102I GCTNAGC 2 cut(s) 62, 1113
BsaAI YACGTR 4 cut(s) 417, 841, 851, 910
BsaBI GATNNNNATC 2 cut(s) 480, 683
BsaI GGTCTC 1 cut(s) 992
BsaJI CCNNGG 1 cut(s) 1161
BsaWI WCCGGW 6 cut(s) 278, 352, 772, 880, 896, 959
BsaXI ACNNNNNCTCC 2 cut(s) 9, 39
Bsc4I CCNNNNNNNGG 2 cut(s) 827, 1073
Bse118I RCCGGY 2 cut(s) 988, 992
Bse1I ACTGG 2 cut(s) 51, 951
Bse3DI GCAATG 1 cut(s) 1327
Bse8I GATNNNNATC 2 cut(s) 480, 683
BseAI TCCGGA 2 cut(s) 772, 880
BseBI CCWGG 1 cut(s) 1021
BseDI CCNNGG 1 cut(s) 1161
BseGI GGATG 2 cut(s) 535, 1157
BseJI GATNNNNATC 2 cut(s) 480, 683
BseLI CCNNNNNNNGG 2 cut(s) 827, 1073
BseMI GCAATG 1 cut(s) 1327
BseMII CTCAG 3 cut(s) 204, 246, 1104
BseNI ACTGG 2 cut(s) 51, 951
BseX3I CGGCCG 1 cut(s) 990
BseXI GCAGC 4 cut(s) 108, 679, 887, 1121
Bsh1236I CGCG 3 cut(s) 422, 697, 741
Bsh1285I CGRYCG 1 cut(s) 993
BshFI GGCC 7 cut(s) 449, 489, 752, 992, 1019, 1024, 1156
BsiEI CGRYCG 1 cut(s) 993
BsiHKAI GWGCWC 2 cut(s) 22, 973
BsiHKCI CYCGRG 2 cut(s) 172, 339
BsiSI CCGG 8 cut(s) 279, 353, 773, 881, 897, 960, 989, 993
BsiWI CGTACG 1 cut(s) 417
BslFI GGGAC 1 cut(s) 246
BslI CCNNNNNNNGG 2 cut(s) 827, 1073
BsmAI GTCTC 3 cut(s) 336, 992, 1299
BsmFI GGGAC 1 cut(s) 246
BsmI GAATGC 1 cut(s) 707
BsnI GGCC 7 cut(s) 449, 489, 752, 992, 1019, 1024, 1156
Bso31I GGTCTC 1 cut(s) 992
BsoBI CYCGRG 2 cut(s) 172, 339
Bsp1286I GDGCHC 2 cut(s) 22, 973
Bsp13I TCCGGA 2 cut(s) 772, 880
Bsp143I GATC 9 cut(s) 135, 168, 193, 265, 285, 577, 769, 1078, 1141
Bsp1720I GCTNAGC 2 cut(s) 62, 1113
Bsp19I CCATGG 1 cut(s) 1161
BspACI CCGC 4 cut(s) 68, 320, 506, 739
BspANI GGCC 7 cut(s) 449, 489, 752, 992, 1019, 1024, 1156
BspCNI CTCAG 3 cut(s) 205, 245, 1105
BspEI TCCGGA 2 cut(s) 772, 880
BspFNI CGCG 3 cut(s) 422, 697, 741
BspLI GGNNCC 2 cut(s) 771, 1065
BspPI GGATC 6 cut(s) 163, 260, 293, 764, 777, 1136
BspTI CTTAAG 2 cut(s) 674, 1034
BspTNI GGTCTC 1 cut(s) 992
BsrDI GCAATG 1 cut(s) 1327
BsrFI RCCGGY 2 cut(s) 988, 992
BsrI ACTGG 2 cut(s) 51, 951
BssAI RCCGGY 2 cut(s) 988, 992
BssECI CCNNGG 1 cut(s) 1161
BssMI GATC 9 cut(s) 135, 168, 193, 265, 285, 577, 769, 1078, 1141
BssSI CACGAG 1 cut(s) 21
BssT1I CCWWGG 1 cut(s) 1161
Bst2BI CACGAG 1 cut(s) 21
Bst2UI CCWGG 1 cut(s) 1021
Bst4CI ACNGT 2 cut(s) 11, 929
Bst6I CTCTTC 2 cut(s) 638, 1035
BstAFI CTTAAG 2 cut(s) 674, 1034
BstBAI YACGTR 4 cut(s) 417, 841, 851, 910
BstC8I GCNNGC 4 cut(s) 68, 436, 491, 1267
BstDEI CTNAG 4 cut(s) 62, 213, 232, 1113
BstDSI CCRYGG 1 cut(s) 1161
BstF5I GGATG 2 cut(s) 535, 1157
BstFNI CGCG 3 cut(s) 422, 697, 741
BstH2I RGCGCY 1 cut(s) 62
BstHHI GCGC 3 cut(s) 61, 424, 697
BstKTI GATC 9 cut(s) 138, 171, 196, 268, 288, 580, 772, 1081, 1144
BstMAI GTCTC 3 cut(s) 336, 992, 1299
BstMBI GATC 9 cut(s) 135, 168, 193, 265, 285, 577, 769, 1078, 1141
BstMCI CGRYCG 1 cut(s) 993
BstMWI GCNNNNNNNGC 4 cut(s) 67, 486, 689, 1106
BstNI CCWGG 1 cut(s) 1021
BstNSI RCATGY 1 cut(s) 607
BstSCI CCNGG 1 cut(s) 1019
BstSFI CTRYAG 1 cut(s) 207
BstSNI TACGTA 1 cut(s) 910
BstUI CGCG 3 cut(s) 422, 697, 741
BstV1I GCAGC 4 cut(s) 108, 679, 887, 1121
BstV2I GAAGAC 2 cut(s) 970, 1252
BstX2I RGATCY 1 cut(s) 769
BstXI CCANNNNNNTGG 3 cut(s) 660, 1009, 1313
BstYI RGATCY 1 cut(s) 769
BstZI CGGCCG 1 cut(s) 990
BsuRI GGCC 7 cut(s) 449, 489, 752, 992, 1019, 1024, 1156
BtgI CCRYGG 1 cut(s) 1161
BtrI CACGTC 1 cut(s) 922
BtsCI GGATG 2 cut(s) 535, 1157
BtsI GCAGTG 1 cut(s) 163
BtsIMutI CAGTG 1 cut(s) 163
Cac8I GCNNGC 4 cut(s) 68, 436, 491, 1267
CfoI GCGC 3 cut(s) 61, 424, 697
Cfr10I RCCGGY 2 cut(s) 988, 992
Cfr13I GGNCC 3 cut(s) 818, 1017, 1063
Csp6I GTAC 8 cut(s) 273, 418, 595, 601, 861, 907, 925, 1227
CviAII CATG 5 cut(s) 258, 604, 660, 1162, 1337
CviQI GTAC 8 cut(s) 273, 418, 595, 601, 861, 907, 925, 1227
DdeI CTNAG 4 cut(s) 62, 213, 232, 1113
DpnI GATC 9 cut(s) 137, 170, 195, 267, 287, 579, 771, 1080, 1143
DpnII GATC 9 cut(s) 135, 168, 193, 265, 285, 577, 769, 1078, 1141
DraI TTTAAA 1 cut(s) 349
EaeI YGGCCR 2 cut(s) 447, 990
EagI CGGCCG 1 cut(s) 990
Eam1104I CTCTTC 2 cut(s) 638, 1035
EarI CTCTTC 2 cut(s) 638, 1035
EciI GGCGGA 1 cut(s) 521
Ecl136II GAGCTC 2 cut(s) 20, 971
EclXI CGGCCG 1 cut(s) 990
Eco105I TACGTA 1 cut(s) 910
Eco130I CCWWGG 1 cut(s) 1161
Eco147I AGGCCT 2 cut(s) 752, 1024
Eco24I GRGCYC 2 cut(s) 22, 973
Eco31I GGTCTC 1 cut(s) 992
Eco47I GGWCC 2 cut(s) 818, 1063
Eco52I CGGCCG 1 cut(s) 990
Eco53kI GAGCTC 2 cut(s) 20, 971
Eco57I CTGAAG 2 cut(s) 619, 1070
Eco88I CYCGRG 2 cut(s) 172, 339
EcoICRI GAGCTC 2 cut(s) 20, 971
EcoRII CCWGG 1 cut(s) 1019
EcoT14I CCWWGG 1 cut(s) 1161
EcoT38I GRGCYC 2 cut(s) 22, 973
ErhI CCWWGG 1 cut(s) 1161
FaeI CATG 5 cut(s) 261, 607, 663, 1165, 1340
FalI AAGNNNNNCTT 4 cut(s) 284, 316, 639, 671
FaqI GGGAC 1 cut(s) 246
FatI CATG 5 cut(s) 257, 603, 659, 1161, 1336
FauI CCCGC 1 cut(s) 75
Fnu4HI GCNGC 5 cut(s) 97, 321, 693, 876, 1110
FokI GGATG 2 cut(s) 522, 1144
FriOI GRGCYC 2 cut(s) 22, 973
Fsp4HI GCNGC 5 cut(s) 97, 321, 693, 876, 1110
FspBI CTAG 4 cut(s) 429, 1133, 1184, 1351
GlaI GCGC 3 cut(s) 60, 423, 696
GluI GCNGC 5 cut(s) 97, 321, 693, 876, 1110
GsuI CTGGAG 2 cut(s) 34, 968
HaeII RGCGCY 1 cut(s) 62
HaeIII GGCC 7 cut(s) 449, 489, 752, 992, 1019, 1024, 1156
HapII CCGG 8 cut(s) 279, 353, 773, 881, 897, 960, 989, 993
HhaI GCGC 3 cut(s) 61, 424, 697
Hin1II CATG 5 cut(s) 261, 607, 663, 1165, 1340
Hin6I GCGC 3 cut(s) 59, 422, 695
HinP1I GCGC 3 cut(s) 59, 422, 695
HincII GTYRAC 1 cut(s) 957
HindII GTYRAC 1 cut(s) 957
HindIII AAGCTT 3 cut(s) 251, 616, 1070
HinfI GANTC 3 cut(s) 140, 361, 1136
HpaII CCGG 8 cut(s) 279, 353, 773, 881, 897, 960, 989, 993
HphI GGTGA 2 cut(s) 1007, 1295
Hpy166II GTNNAC 6 cut(s) 28, 312, 406, 595, 925, 957
Hpy188I TCNGA 9 cut(s) 235, 638, 689, 724, 796, 818, 1141, 1146, 1244
Hpy188III TCNNGA 8 cut(s) 172, 263, 289, 647, 773, 881, 974, 1184
Hpy8I GTNNAC 6 cut(s) 28, 312, 406, 595, 925, 957
Hpy99I CGWCG 2 cut(s) 455, 923
HpyAV CCTTC 5 cut(s) 276, 325, 1035, 1204, 1247
HpyCH4III ACNGT 2 cut(s) 11, 929
HpyCH4IV ACGT 6 cut(s) 314, 416, 840, 850, 909, 921
HpyCH4V TGCA 6 cut(s) 535, 607, 707, 715, 785, 1100
HpyF10VI GCNNNNNNNGC 4 cut(s) 67, 486, 689, 1106
HpyF3I CTNAG 4 cut(s) 62, 213, 232, 1113
HpySE526I ACGT 6 cut(s) 314, 416, 840, 850, 909, 921
Hsp92II CATG 5 cut(s) 261, 607, 663, 1165, 1340
HspAI GCGC 3 cut(s) 59, 422, 695
Kpn2I TCCGGA 2 cut(s) 772, 880
Kzo9I GATC 9 cut(s) 135, 168, 193, 265, 285, 577, 769, 1078, 1141
LmnI GCTCC 3 cut(s) 17, 689, 883
Lsp1109I GCAGC 4 cut(s) 108, 679, 887, 1121
LweI GCATC 2 cut(s) 447, 544
MaeI CTAG 4 cut(s) 429, 1133, 1184, 1351
MaeII ACGT 6 cut(s) 314, 416, 840, 850, 909, 921
MaeIII GTNAC 2 cut(s) 841, 942
MalI GATC 9 cut(s) 137, 170, 195, 267, 287, 579, 771, 1080, 1143
MboI GATC 9 cut(s) 135, 168, 193, 265, 285, 577, 769, 1078, 1141
MflI RGATCY 1 cut(s) 769
MhlI GDGCHC 2 cut(s) 22, 973
MluCI AATT 6 cut(s) 177, 514, 581, 1003, 1299, 1329
MlyI GAGTC 1 cut(s) 134
MmeI TCCRAC 1 cut(s) 492
MroI TCCGGA 2 cut(s) 772, 880
MseI TTAA 7 cut(s) 90, 189, 348, 675, 1035, 1203, 1236
MslI CAYNNNNRTG 2 cut(s) 443, 658
MspA1I CMGCKG 1 cut(s) 1112
MspCI CTTAAG 2 cut(s) 674, 1034
MspI CCGG 8 cut(s) 279, 353, 773, 881, 897, 960, 989, 993
MspR9I CCNGG 1 cut(s) 1021
Mva1269I GAATGC 1 cut(s) 707
MvaI CCWGG 1 cut(s) 1021
MvnI CGCG 3 cut(s) 422, 697, 741
MwoI GCNNNNNNNGC 4 cut(s) 67, 486, 689, 1106
NcoI CCATGG 1 cut(s) 1161
NdeII GATC 9 cut(s) 135, 168, 193, 265, 285, 577, 769, 1078, 1141
NlaIII CATG 5 cut(s) 261, 607, 663, 1165, 1340
NlaIV GGNNCC 2 cut(s) 771, 1065
NmeAIII GCCGAG 1 cut(s) 1321
NspI RCATGY 1 cut(s) 607
PceI AGGCCT 2 cut(s) 752, 1024
PcsI WCGNNNNNNNCGW 5 cut(s) 320, 422, 447, 915, 933
PctI GAATGC 1 cut(s) 707
PfeI GAWTC 2 cut(s) 361, 1136
Pfl23II CGTACG 1 cut(s) 417
PflMI CCANNNNNTGG 2 cut(s) 827, 1073
PkrI GCNGC 5 cut(s) 98, 322, 694, 877, 1111
PleI GAGTC 1 cut(s) 134
PpsI GAGTC 1 cut(s) 134
Ppu21I YACGTR 4 cut(s) 417, 841, 851, 910
PsiI TTATAA 1 cut(s) 1281
Psp124BI GAGCTC 2 cut(s) 22, 973
Psp6I CCWGG 1 cut(s) 1019
PspGI CCWGG 1 cut(s) 1019
PspLI CGTACG 1 cut(s) 417
PspN4I GGNNCC 2 cut(s) 771, 1065
PspPI GGNCC 3 cut(s) 818, 1017, 1063
PsuI RGATCY 1 cut(s) 769
PvuII CAGCTG 1 cut(s) 1112
RsaI GTAC 8 cut(s) 274, 419, 596, 602, 862, 908, 926, 1228
RsaNI GTAC 8 cut(s) 273, 418, 595, 601, 861, 907, 925, 1227
RseI CAYNNNNRTG 2 cut(s) 443, 658
SacI GAGCTC 2 cut(s) 22, 973
SaqAI TTAA 7 cut(s) 90, 189, 348, 675, 1035, 1203, 1236
SatI GCNGC 5 cut(s) 97, 321, 693, 876, 1110
Sau3AI GATC 9 cut(s) 135, 168, 193, 265, 285, 577, 769, 1078, 1141
Sau96I GGNCC 3 cut(s) 818, 1017, 1063
ScaI AGTACT 1 cut(s) 274
SchI GAGTC 1 cut(s) 134
ScrFI CCNGG 1 cut(s) 1021
SduI GDGCHC 2 cut(s) 22, 973
SfaNI GCATC 2 cut(s) 447, 544
SfcI CTRYAG 1 cut(s) 207
SinI GGWCC 2 cut(s) 818, 1063
SmiMI CAYNNNNRTG 2 cut(s) 443, 658
SmlI CTYRAG 2 cut(s) 674, 1034
SmoI CTYRAG 2 cut(s) 674, 1034
SnaBI TACGTA 1 cut(s) 910
Sse9I AATT 6 cut(s) 177, 514, 581, 1003, 1299, 1329
SseBI AGGCCT 2 cut(s) 752, 1024
SsiI CCGC 4 cut(s) 68, 320, 506, 739
SspI AATATT 1 cut(s) 760
SspMI CTAG 4 cut(s) 429, 1133, 1184, 1351
SstI GAGCTC 2 cut(s) 22, 973
StuI AGGCCT 2 cut(s) 752, 1024
StyD4I CCNGG 1 cut(s) 1019
StyI CCWWGG 1 cut(s) 1161
TaaI ACNGT 2 cut(s) 11, 929
TaiI ACGT 6 cut(s) 317, 419, 843, 853, 912, 924
TaqI TCGA 3 cut(s) 138, 196, 975
TasI AATT 6 cut(s) 177, 514, 581, 1003, 1299, 1329
TatI WGTACW 3 cut(s) 272, 600, 1226
TauI GCSGC 1 cut(s) 323
TfiI GAWTC 2 cut(s) 361, 1136
Tru1I TTAA 7 cut(s) 90, 189, 348, 675, 1035, 1203, 1236
Tru9I TTAA 7 cut(s) 90, 189, 348, 675, 1035, 1203, 1236
TscAI CASTG 1 cut(s) 163
TseI GCWGC 4 cut(s) 96, 692, 875, 1109
TspDTI ATGAA 1 cut(s) 648
TspRI CASTG 1 cut(s) 163
Van91I CCANNNNNTGG 2 cut(s) 827, 1073
Vha464I CTTAAG 2 cut(s) 674, 1034
VpaK11BI GGWCC 2 cut(s) 818, 1063
XbaI TCTAGA 1 cut(s) 1183
XceI RCATGY 1 cut(s) 607
XcmI CCANNNNNNNNNTGG 2 cut(s) 763, 1313
XspI CTAG 4 cut(s) 429, 1133, 1184, 1351
ZrmI AGTACT 1 cut(s) 274
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.