Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G22760 |
| malus_domestica | MD04G1078100.v1.1 |
| prunus_persica | Prupe.5G080600_v2.0.a1 |
| pyrus_communis | pycom04g07010 pycom06g06320 pycom06g06340 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 75 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 245, 252 |
| AgsI | TTSAA | 2 cut(s) | 38, 56 |
| AluBI | AGCT | 3 cut(s) | 106, 214, 261 |
| AluI | AGCT | 3 cut(s) | 106, 214, 261 |
| Alw21I | GWGCWC | 1 cut(s) | 279 |
| ApeKI | GCWGC | 2 cut(s) | 15, 106 |
| ApoI | RAATTY | 1 cut(s) | 75 |
| AsuC2I | CCSGG | 1 cut(s) | 247 |
| AsuHPI | GGTGA | 1 cut(s) | 161 |
| Bbv12I | GWGCWC | 1 cut(s) | 279 |
| BbvI | GCAGC | 2 cut(s) | 27, 93 |
| BceAI | ACGGC | 1 cut(s) | 159 |
| BcnI | CCSGG | 1 cut(s) | 247 |
| BisI | GCNGC | 2 cut(s) | 16, 107 |
| BlsI | GCNGC | 2 cut(s) | 17, 108 |
| Bme1390I | CCNGG | 1 cut(s) | 247 |
| BmiI | GGNNCC | 1 cut(s) | 163 |
| BmrFI | CCNGG | 1 cut(s) | 247 |
| BmsI | GCATC | 1 cut(s) | 2 |
| BpuEI | CTTGAG | 2 cut(s) | 158, 225 |
| BpuMI | CCSGG | 1 cut(s) | 247 |
| BsaJI | CCNNGG | 2 cut(s) | 130, 246 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 245, 252 |
| BseDI | CCNNGG | 2 cut(s) | 130, 246 |
| BseGI | GGATG | 1 cut(s) | 17 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 245, 252 |
| BseMII | CTCAG | 1 cut(s) | 93 |
| BseXI | GCAGC | 2 cut(s) | 27, 93 |
| BsiHKAI | GWGCWC | 1 cut(s) | 279 |
| BsiSI | CCGG | 1 cut(s) | 246 |
| BslFI | GGGAC | 1 cut(s) | 66 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 245, 252 |
| BsmFI | GGGAC | 1 cut(s) | 66 |
| Bsp1286I | GDGCHC | 1 cut(s) | 279 |
| Bsp143I | GATC | 1 cut(s) | 3 |
| Bsp19I | CCATGG | 1 cut(s) | 130 |
| BspCNI | CTCAG | 1 cut(s) | 94 |
| BspHI | TCATGA | 1 cut(s) | 124 |
| BspLI | GGNNCC | 1 cut(s) | 163 |
| BssECI | CCNNGG | 2 cut(s) | 130, 246 |
| BssMI | GATC | 1 cut(s) | 3 |
| BssT1I | CCWWGG | 1 cut(s) | 130 |
| Bst4CI | ACNGT | 1 cut(s) | 195 |
| Bst6I | CTCTTC | 1 cut(s) | 51 |
| BstC8I | GCNNGC | 2 cut(s) | 227, 275 |
| BstDEI | CTNAG | 1 cut(s) | 102 |
| BstDSI | CCRYGG | 1 cut(s) | 130 |
| BstF5I | GGATG | 1 cut(s) | 17 |
| BstKTI | GATC | 1 cut(s) | 6 |
| BstMBI | GATC | 1 cut(s) | 3 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 24, 38 |
| BstNSI | RCATGY | 1 cut(s) | 229 |
| BstSCI | CCNGG | 1 cut(s) | 245 |
| BstV1I | GCAGC | 2 cut(s) | 27, 93 |
| BtgI | CCRYGG | 1 cut(s) | 130 |
| BtsCI | GGATG | 1 cut(s) | 17 |
| BtsIMutI | CAGTG | 1 cut(s) | 99 |
| Cac8I | GCNNGC | 2 cut(s) | 227, 275 |
| CciI | TCATGA | 1 cut(s) | 124 |
| CviAII | CATG | 3 cut(s) | 125, 131, 226 |
| CviJI | RGCY | 6 cut(s) | 106, 142, 174, 214, 245, 261 |
| CviKI_1 | RGCY | 6 cut(s) | 106, 142, 174, 214, 245, 261 |
| DdeI | CTNAG | 1 cut(s) | 102 |
| DpnI | GATC | 1 cut(s) | 5 |
| DpnII | GATC | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 1 cut(s) | 51 |
| EarI | CTCTTC | 1 cut(s) | 51 |
| Eco130I | CCWWGG | 1 cut(s) | 130 |
| EcoT14I | CCWWGG | 1 cut(s) | 130 |
| ErhI | CCWWGG | 1 cut(s) | 130 |
| FaeI | CATG | 3 cut(s) | 128, 134, 229 |
| FaiI | YATR | 7 cut(s) | 20, 97, 120, 126, 132, 159, 227 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 250, 282 |
| FaqI | GGGAC | 1 cut(s) | 66 |
| FatI | CATG | 3 cut(s) | 124, 130, 225 |
| Fnu4HI | GCNGC | 2 cut(s) | 16, 107 |
| FokI | GGATG | 1 cut(s) | 24 |
| Fsp4HI | GCNGC | 2 cut(s) | 16, 107 |
| GluI | GCNGC | 2 cut(s) | 16, 107 |
| HapII | CCGG | 1 cut(s) | 246 |
| Hin1II | CATG | 3 cut(s) | 128, 134, 229 |
| HindIII | AAGCTT | 1 cut(s) | 259 |
| HpaII | CCGG | 1 cut(s) | 246 |
| HphI | GGTGA | 1 cut(s) | 161 |
| Hpy188III | TCNNGA | 1 cut(s) | 125 |
| HpyAV | CCTTC | 1 cut(s) | 153 |
| HpyCH4III | ACNGT | 1 cut(s) | 195 |
| HpyCH4V | TGCA | 2 cut(s) | 15, 235 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 24, 38 |
| HpyF3I | CTNAG | 1 cut(s) | 102 |
| Hsp92II | CATG | 3 cut(s) | 128, 134, 229 |
| Kzo9I | GATC | 1 cut(s) | 3 |
| LpnPI | CCDG | 2 cut(s) | 174, 259 |
| Lsp1109I | GCAGC | 2 cut(s) | 27, 93 |
| LweI | GCATC | 1 cut(s) | 2 |
| MaeIII | GTNAC | 1 cut(s) | 91 |
| MalI | GATC | 1 cut(s) | 5 |
| MboI | GATC | 1 cut(s) | 3 |
| MboII | GAAGA | 1 cut(s) | 68 |
| MhlI | GDGCHC | 1 cut(s) | 279 |
| MluCI | AATT | 2 cut(s) | 75, 154 |
| MmeI | TCCRAC | 1 cut(s) | 177 |
| MnlI | CCTC | 3 cut(s) | 54, 177, 249 |
| MslI | CAYNNNNRTG | 3 cut(s) | 129, 230, 289 |
| MspI | CCGG | 1 cut(s) | 246 |
| MspR9I | CCNGG | 1 cut(s) | 247 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 24, 38 |
| NciI | CCSGG | 1 cut(s) | 247 |
| NcoI | CCATGG | 1 cut(s) | 130 |
| NdeII | GATC | 1 cut(s) | 3 |
| NlaIII | CATG | 3 cut(s) | 128, 134, 229 |
| NlaIV | GGNNCC | 1 cut(s) | 163 |
| NspI | RCATGY | 1 cut(s) | 229 |
| PaeI | GCATGC | 1 cut(s) | 229 |
| PagI | TCATGA | 1 cut(s) | 124 |
| PkrI | GCNGC | 2 cut(s) | 17, 108 |
| PspN4I | GGNNCC | 1 cut(s) | 163 |
| RseI | CAYNNNNRTG | 3 cut(s) | 129, 230, 289 |
| SatI | GCNGC | 2 cut(s) | 16, 107 |
| Sau3AI | GATC | 1 cut(s) | 3 |
| ScrFI | CCNGG | 1 cut(s) | 247 |
| SduI | GDGCHC | 1 cut(s) | 279 |
| SetI | ASST | 4 cut(s) | 108, 216, 241, 263 |
| SfaNI | GCATC | 1 cut(s) | 2 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 129, 230, 289 |
| SmlI | CTYRAG | 2 cut(s) | 137, 240 |
| SmoI | CTYRAG | 2 cut(s) | 137, 240 |
| SphI | GCATGC | 1 cut(s) | 229 |
| Sse9I | AATT | 2 cut(s) | 75, 154 |
| StyD4I | CCNGG | 1 cut(s) | 245 |
| StyI | CCWWGG | 1 cut(s) | 130 |
| TaaI | ACNGT | 1 cut(s) | 195 |
| TasI | AATT | 2 cut(s) | 75, 154 |
| TscAI | CASTG | 1 cut(s) | 106 |
| TseI | GCWGC | 2 cut(s) | 15, 106 |
| TspRI | CASTG | 1 cut(s) | 106 |
| XapI | RAATTY | 1 cut(s) | 75 |
| XceI | RCATGY | 1 cut(s) | 229 |