Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0005888

Physical Location & Seq

Genomic Coordinates Forward (+)

14018614 .. 14023515

Gene Structure 4902 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g08830.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2076 bp

ATGGAAGCGGTGGACGTGAGTATTCCGGTGGGTGTTGCCGCGGTGCCAAAGTTTCTGGGGGTGGAGGCGCTTGTGAGAGCTGGGGTTACAGTCAAGGAACTTGAGCCTTGTGATTCGGACCGCGTTTCCGTTCGTGTTAGCGCTTACACTGAGGCTTGCAGCTCATCTTTGAGGGATAAAGAGGTAACGAATGCGGTTAGTACTTCAGAGTATGAATCAACTAAGCTCAGTGATCTGATGAGCCAGTGCAAGAATCAGGGTGAAGAATCGTCCAGGCACCTACATGGCAGGGGCAAAAGTGGTTTTTTGTTGGATACTGGTGCTGAAAGCGTACAGTTAGAAAAACCAGGGAAGGTGTCAAAATTGGTTAGTTTGTCATCTAAGAGACCACGTGTTGATCGATTGGAAGATCCAACGAGCGTTGCTGCTGATGTTGATGGGATAAAGGATATGTCATTTAAGCTTGGACCAATACTTACAAAGTGTGGTTCTTCAGATAAGACTCAATTGGTGAAACCAAAGAATAATTTTACAAGCAAGCGAGGTGAAAAGAGAAATCTCAAACTTCCTGCAAAGACAAAACAAGATTCCTTCTCTATAAAGCCAGGTTTGGCAAGCTTCAGTTCAGCTGCTGGTGGAAACAACTTTTATGGAGTACATGGCCTTAAGTCAGATAATCATGATGTTACAAAGCTGGTAGATGATGTGCCACTAAATGAACTCCTTGATGGGACATACAAGTGCCCTAGTTTAAGCAGGGGAAAAGGGAAGAAACCAGCGAATGTAAACGATAGTTTTCTGCATGCAGTTAAAAAGGCTTGTTCTACCCTTCAGCAGCCGAGGTCTGTCCAGCCCCAACTTATTGCTGAGGTAGAAAGCAATTCTGACAAGGTAATGTCACCGTGGCCGTTAAGCACGACTTCTGTTGCAGCTTCTGGTGTCGGTGGTGATAAAGGAGAACCATTCATCACAGATTTGTCTTCATGTAATGAGGATTCTCATAGAAAGCCCGTAGCTCCTGTTAATCCCCTTGATTTGCCATTGTGTGAACCTAAGTATGTTTTGGAATGCTTGGCCCTTCCTCCACACAAGGATTTGGAATCTGTGCTTTTGGATGCTGCAAAACCTGCTTCATCTTCCAAAAATACTCCTGATCCATGTTCAGGCAAGCAAATATCTCGCCGAGCAAGCTTGCCTTCTTTTCCATGGTCACATACTTCTAATGGACACTGTAGATCCAGTTCCGATGCAGCCAAACAGTCCATAAGCAGGGGCACATGCCAAGGCCGATGGCTAAGAGTTGACAAAAATATTCTTAGTTCATTGGGGAATGCCACTGATAATTTGACAGACTTGGAGTCACTAACCTATGATCAGAGTCTAGTTCCTTCCGCAAGACTAAAAGTTTCTGGTTCCCAAAATAAAGTTTCCCCATCCATATCTGTTAGTCTTTCTCGATGTCAGCGAGATTCATTGTCTAATACGACACCTTCGAATGATTCCTACATTCCAAAAGAATCTGGAGGCAAGCTGAATCATTCAGGAGATTGTAATGATGAGAATTGTCCAAAAGTATTAAGTGCTGCTCAAACACTCTGTGACATGGCAACTCGTACCTCTAGTAAAAATCCAGATGGAATCATAAGATGGCCAAAGAAGCCTTCACAAAAAGCCATGAAAGCTCGGAAGTTGATATCAATTGAGAAACCTGAAGAAGCATATGGGACATCAGTTGCGGTATCTGGGTCCGACAATCCCAGGAGAAGCGTGGATCAGATGCTGCCCCCAAAGAAGCCCAAGCTCTCTTTGATTGATGATAAAAGGGATTTCACTAATTTTAGTTCTGTAAGGCAAGGAACAATAGCTTGGTCTACGCCCAGATCAAGTAGGTCATCGCCTGGCAGGTCAGTTAAGGAGTCAGTTGCGGATATTAAACATTCAACTGCAGATGTCGTGAAGCATTCTTATATGATGCCACCACCAGCTCGGGTTCCGGAAAAGACTTCAAACAAACGAGAGAAGCAAAGGAAGTTGTTGACAACGGAATGGAACAAAGGAAGGGATCGGCTAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

692

Amino Acids

74.77

Weight (kDa)

9.27

Isoelectric Point (pI)

46.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005888)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64050 AT1G64050
fragaria_vesca	FvH4_5g03290 FvH4_5g03290 FvH4_5g03290
malus_domestica	MD06G1092500.v1.1 MD14G1113000.v1.1
prunus_persica	Prupe.5G107200_v2.0.a1 Prupe.5G107200_v2.0.a1 Prupe.5G107200_v2.0.a1 Prupe.5G107200_v2.0.a1 Prupe.5G107200_v2.0.a1 Prupe.5G107200_v2.0.a1 Prupe.5G107200_v2.0.a1 Prupe.5G107200_v2.0.a1
pyrus_communis	pycom06g08830 pycom14g10800
rosa_chinensis	RchiOBHm_Chr7g0196491
rosa_laevigata	RLG00000004009
rosa_multiflora	Rmu_sc0005497.1_g000004
rosa_roxburghii	Rroxscaffold_3G00259250
rosa_rugosa	Rorug07G0034000 Rorug07G0034100
rosa_samantha	Rh7AG158300 Rh7BG160200 Rh7CG166600 Rh7DG159400
rosa_wichuraiana	Rw7G013830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1135, 1893
AccB1I	GGYRCC	2 cut(s)	43, 276
AccI	GTMKAC	1 cut(s)	1871
AccII	CGCG	2 cut(s)	41, 123
AccIII	TCCGGA	1 cut(s)	1993
AciI	CCGC	8 cut(s)	8, 39, 41, 121, 194, 1392, 1736, 1925
AclWI	GGATC	5 cut(s)	404, 1148, 1230, 1779, 2070
AcoI	YGGCCR	2 cut(s)	905, 1649
AcuI	CTGAAG	5 cut(s)	189, 477, 604, 815, 1731
AcvI	CACGTG	1 cut(s)	392
AdeI	CACNNNGTG	1 cut(s)	1598
AfaI	GTAC	4 cut(s)	202, 333, 657, 1615
AfeI	AGCGCT	1 cut(s)	142
AfiI	CCNNNNNNNGG	2 cut(s)	1163, 1269
AflII	CTTAAG	1 cut(s)	665
AflIII	ACRYGT	1 cut(s)	391
AgsI	TTSAA	2 cut(s)	1941, 2007
AhdI	GACNNNNNGTC	1 cut(s)	1357
AjiI	CACGTC	1 cut(s)	16
AjnI	CCWGG	5 cut(s)	272, 346, 604, 1757, 1897
AjuI	GAANNNNNNNTTGG	4 cut(s)	1645, 1677, 1849, 1881
Alw26I	GTCTC	1 cut(s)	379
AlwI	GGATC	5 cut(s)	404, 1148, 1230, 1779, 2070
AlwNI	CAGNNNCTG	3 cut(s)	632, 935, 1780
Ama87I	CYCGRG	1 cut(s)	1986
Aor13HI	TCCGGA	1 cut(s)	1993
Aor51HI	AGCGCT	1 cut(s)	142
AoxI	GGCC	5 cut(s)	661, 905, 1074, 1285, 1649
ApeKI	GCWGC	9 cut(s)	159, 425, 629, 835, 929, 1118, 1250, 1583, 1780
AspLEI	GCGC	2 cut(s)	70, 143
AspS9I	GGNCC	4 cut(s)	118, 467, 1075, 1746
AsuHPI	GGTGA	5 cut(s)	272, 523, 557, 891, 959
AsuII	TTCGAA	1 cut(s)	1493
AvaI	CYCGRG	1 cut(s)	1986
AvaII	GGWCC	3 cut(s)	118, 467, 1746
BaeGI	GKGCMC	2 cut(s)	746, 1277
BalI	TGGCCA	1 cut(s)	1651
BanI	GGYRCC	2 cut(s)	43, 276
BbrPI	CACGTG	1 cut(s)	392
BbsI	GAAGAC	1 cut(s)	972
BbvCI	CCTCAGC	1 cut(s)	867
BbvI	GCAGC	9 cut(s)	171, 412, 616, 847, 941, 1105, 1262, 1570, 1767
BccI	CCATC	6 cut(s)	431, 722, 1284, 1441, 1628, 1641
BceAI	ACGGC	1 cut(s)	892
BcgI	CGANNNNNNTGC	2 cut(s)	1160, 1194
BciT130I	CCWGG	5 cut(s)	274, 348, 606, 1759, 1899
BciVI	GTATCC	1 cut(s)	307
BclI	TGATCA	1 cut(s)	1372
BcoDI	GTCTC	1 cut(s)	379
BfaI	CTAG	4 cut(s)	747, 1382, 1620, 2069
BfmI	CTRYAG	2 cut(s)	1231, 1944
BfoI	RGCGCY	2 cut(s)	71, 144
BfrI	CTTAAG	1 cut(s)	665
BfuAI	ACCTGC	2 cut(s)	1135, 1893
BfuI	GTATCC	1 cut(s)	307
BmcAI	AGTACT	1 cut(s)	202
Bme1390I	CCNGG	5 cut(s)	274, 348, 606, 1759, 1899
Bme18I	GGWCC	3 cut(s)	118, 467, 1746
BmeRI	GACNNNNNGTC	1 cut(s)	1357
BmeT110I	CYCGRG	1 cut(s)	1986
BmgBI	CACGTC	1 cut(s)	16
BmgT120I	GGNCC	4 cut(s)	118, 467, 1075, 1746
BmiI	GGNNCC	5 cut(s)	45, 278, 1414, 1747, 1992
BmrFI	CCNGG	5 cut(s)	274, 348, 606, 1759, 1899
BmsI	GCATC	4 cut(s)	1105, 1237, 1767, 1962
BpiI	GAAGAC	1 cut(s)	972
BpmI	CTGGAG	1 cut(s)	1542
Bpu10I	CCTNAGC	1 cut(s)	867
Bpu14I	TTCGAA	1 cut(s)	1493
BpuEI	CTTGAG	1 cut(s)	122
Bsa29I	ATCGAT	1 cut(s)	400
BsaAI	YACGTR	1 cut(s)	392
BsaI	GGTCTC	1 cut(s)	379
BsaJI	CCNNGG	7 cut(s)	39, 347, 839, 902, 1205, 1282, 1757
BsaWI	WCCGGW	2 cut(s)	25, 1993
Bsc4I	CCNNNNNNNGG	2 cut(s)	1163, 1269
Bse1I	ACTGG	3 cut(s)	244, 322, 1239
BseAI	TCCGGA	1 cut(s)	1993
BseBI	CCWGG	5 cut(s)	274, 348, 606, 1759, 1899
BseCI	ATCGAT	1 cut(s)	400
BseDI	CCNNGG	7 cut(s)	39, 347, 839, 902, 1205, 1282, 1757
BseGI	GGATG	2 cut(s)	1120, 1433
BseLI	CCNNNNNNNGG	2 cut(s)	1163, 1269
BseMII	CTCAG	3 cut(s)	141, 241, 858
BseNI	ACTGG	3 cut(s)	244, 322, 1239
BseSI	GKGCMC	2 cut(s)	746, 1277
BseXI	GCAGC	9 cut(s)	171, 412, 616, 847, 941, 1105, 1262, 1570, 1767
BseYI	CCCAGC	1 cut(s)	80
Bsh1236I	CGCG	2 cut(s)	41, 123
BshFI	GGCC	5 cut(s)	663, 907, 1076, 1287, 1651
BshNI	GGYRCC	2 cut(s)	43, 276
BshVI	ATCGAT	1 cut(s)	400
BsiHKCI	CYCGRG	1 cut(s)	1986
BsiSI	CCGG	2 cut(s)	26, 1994
BslFI	GGGAC	2 cut(s)	745, 1738
BslI	CCNNNNNNNGG	2 cut(s)	1163, 1269
BsmAI	GTCTC	1 cut(s)	379
BsmFI	GGGAC	2 cut(s)	745, 1738
BsmI	GAATGC	4 cut(s)	196, 1073, 1336, 1960
BsnI	GGCC	5 cut(s)	663, 907, 1076, 1287, 1651
Bso31I	GGTCTC	1 cut(s)	379
BsoBI	CYCGRG	1 cut(s)	1986
Bsp119I	TTCGAA	1 cut(s)	1493
Bsp1286I	GDGCHC	2 cut(s)	746, 1277
Bsp13I	TCCGGA	1 cut(s)	1993
Bsp143I	GATC	9 cut(s)	232, 397, 409, 1153, 1235, 1372, 1771, 1880, 2062
Bsp19I	CCATGG	1 cut(s)	1205
BspACI	CCGC	8 cut(s)	8, 39, 41, 121, 194, 1392, 1736, 1925
BspANI	GGCC	5 cut(s)	663, 907, 1076, 1287, 1651
BspCNI	CTCAG	3 cut(s)	142, 240, 859
BspDI	ATCGAT	1 cut(s)	400
BspEI	TCCGGA	1 cut(s)	1993
BspFNI	CGCG	2 cut(s)	41, 123
BspHI	TCATGA	1 cut(s)	679
BspLI	GGNNCC	5 cut(s)	45, 278, 1414, 1747, 1992
BspMAI	CTGCAG	1 cut(s)	1948
BspMI	ACCTGC	2 cut(s)	1135, 1893
BspPI	GGATC	5 cut(s)	404, 1148, 1230, 1779, 2070
BspT104I	TTCGAA	1 cut(s)	1493
BspT107I	GGYRCC	2 cut(s)	43, 276
BspTI	CTTAAG	1 cut(s)	665
BspTNI	GGTCTC	1 cut(s)	379
BsrI	ACTGG	3 cut(s)	244, 322, 1239
BssECI	CCNNGG	7 cut(s)	39, 347, 839, 902, 1205, 1282, 1757
BssMI	GATC	9 cut(s)	232, 397, 409, 1153, 1235, 1372, 1771, 1880, 2062
BssT1I	CCWWGG	2 cut(s)	1205, 1282
Bst2UI	CCWGG	5 cut(s)	274, 348, 606, 1759, 1899
Bst4CI	ACNGT	5 cut(s)	91, 336, 903, 1232, 1260
BstAFI	CTTAAG	1 cut(s)	665
BstAPI	GCANNNNNTGC	1 cut(s)	1127
BstBAI	YACGTR	1 cut(s)	392
BstBI	TTCGAA	1 cut(s)	1493
BstC8I	GCNNGC	8 cut(s)	157, 539, 616, 804, 1169, 1189, 1193, 1529
BstDEI	CTNAG	8 cut(s)	150, 222, 227, 381, 867, 1053, 1295, 1316
BstDSI	CCRYGG	3 cut(s)	39, 902, 1205
BstF5I	GGATG	2 cut(s)	1120, 1433
BstFNI	CGCG	2 cut(s)	41, 123
BstH2I	RGCGCY	2 cut(s)	71, 144
BstHHI	GCGC	2 cut(s)	70, 143
BstKTI	GATC	9 cut(s)	235, 400, 412, 1156, 1238, 1375, 1774, 1883, 2065
BstMAI	GTCTC	1 cut(s)	379
BstMBI	GATC	9 cut(s)	232, 397, 409, 1153, 1235, 1372, 1771, 1880, 2062
BstMWI	GCNNNNNNNGC	4 cut(s)	1127, 1188, 1657, 1679
BstNI	CCWGG	5 cut(s)	274, 348, 606, 1759, 1899
BstNSI	RCATGY	2 cut(s)	806, 1281
BstSCI	CCNGG	5 cut(s)	272, 346, 604, 1757, 1897
BstSFI	CTRYAG	2 cut(s)	1231, 1944
BstSLI	GKGCMC	2 cut(s)	746, 1277
BstUI	CGCG	2 cut(s)	41, 123
BstV1I	GCAGC	9 cut(s)	171, 412, 616, 847, 941, 1105, 1262, 1570, 1767
BstV2I	GAAGAC	1 cut(s)	972
BstX2I	RGATCY	2 cut(s)	409, 1235
BstYI	RGATCY	2 cut(s)	409, 1235
Bsu15I	ATCGAT	1 cut(s)	400
BsuI	GTATCC	1 cut(s)	307
BsuRI	GGCC	5 cut(s)	663, 907, 1076, 1287, 1651
BsuTUI	ATCGAT	1 cut(s)	400
BtgI	CCRYGG	3 cut(s)	39, 902, 1205
BtgZI	GCGATG	1 cut(s)	1878
BtrI	CACGTC	1 cut(s)	16
BtsCI	GGATG	2 cut(s)	1120, 1433
BtsIMutI	CAGTG	5 cut(s)	147, 235, 251, 1228, 1335
BveI	ACCTGC	2 cut(s)	1135, 1893
Cac8I	GCNNGC	8 cut(s)	157, 539, 616, 804, 1169, 1189, 1193, 1529
CaiI	CAGNNNCTG	3 cut(s)	632, 935, 1780
CciI	TCATGA	1 cut(s)	679
CfoI	GCGC	2 cut(s)	70, 143
Cfr13I	GGNCC	4 cut(s)	118, 467, 1075, 1746
Cfr42I	CCGCGG	1 cut(s)	42
ClaI	ATCGAT	1 cut(s)	400
CpoI	CGGWCCG	1 cut(s)	118
Csp6I	GTAC	4 cut(s)	201, 332, 656, 1614
CspI	CGGWCCG	1 cut(s)	118
CviQI	GTAC	4 cut(s)	201, 332, 656, 1614
DdeI	CTNAG	8 cut(s)	150, 222, 227, 381, 867, 1053, 1295, 1316
DpnI	GATC	9 cut(s)	234, 399, 411, 1155, 1237, 1374, 1773, 1882, 2064
DpnII	GATC	9 cut(s)	232, 397, 409, 1153, 1235, 1372, 1771, 1880, 2062
DraIII	CACNNNGTG	1 cut(s)	1598
DriI	GACNNNNNGTC	1 cut(s)	1357
EaeI	YGGCCR	2 cut(s)	905, 1649
Eam1105I	GACNNNNNGTC	1 cut(s)	1357
Eco130I	CCWWGG	2 cut(s)	1205, 1282
Eco31I	GGTCTC	1 cut(s)	379
Eco32I	GATATC	1 cut(s)	1695
Eco47I	GGWCC	3 cut(s)	118, 467, 1746
Eco47III	AGCGCT	1 cut(s)	142
Eco57I	CTGAAG	5 cut(s)	189, 477, 604, 815, 1731
Eco72I	CACGTG	1 cut(s)	392
Eco88I	CYCGRG	1 cut(s)	1986
EcoRII	CCWGG	5 cut(s)	272, 346, 604, 1757, 1897
EcoRV	GATATC	1 cut(s)	1695
EcoT14I	CCWWGG	2 cut(s)	1205, 1282
ErhI	CCWWGG	2 cut(s)	1205, 1282
FalI	AAGNNNNNCTT	4 cut(s)	904, 936, 1180, 1212
FaqI	GGGAC	2 cut(s)	745, 1738
FauNDI	CATATG	1 cut(s)	1720
FbaI	TGATCA	1 cut(s)	1372
FblI	GTMKAC	1 cut(s)	1871
FokI	GGATG	2 cut(s)	1127, 1420
FspBI	CTAG	4 cut(s)	747, 1382, 1620, 2069
GlaI	GCGC	2 cut(s)	69, 142
GsaI	CCCAGC	1 cut(s)	84
GsuI	CTGGAG	1 cut(s)	1542
HaeII	RGCGCY	2 cut(s)	71, 144
HaeIII	GGCC	5 cut(s)	663, 907, 1076, 1287, 1651
HapII	CCGG	2 cut(s)	26, 1994
HhaI	GCGC	2 cut(s)	70, 143
Hin6I	GCGC	2 cut(s)	68, 141
HinP1I	GCGC	2 cut(s)	68, 141
HincII	GTYRAC	2 cut(s)	1303, 2037
HindII	GTYRAC	2 cut(s)	1303, 2037
HindIII	AAGCTT	3 cut(s)	461, 616, 1189
HpaII	CCGG	2 cut(s)	26, 1994
HphI	GGTGA	5 cut(s)	272, 523, 557, 891, 959
Hpy166II	GTNNAC	6 cut(s)	13, 787, 1049, 1303, 1872, 2037
Hpy188III	TCNNGA	8 cut(s)	680, 1151, 1455, 1521, 1542, 1631, 1954, 1994
Hpy8I	GTNNAC	6 cut(s)	13, 787, 1049, 1303, 1872, 2037
HpyAV	CCTTC	9 cut(s)	346, 601, 839, 1088, 1206, 1398, 1500, 1671, 2052
HpyCH4III	ACNGT	5 cut(s)	91, 336, 903, 1232, 1260
HpyCH4IV	ACGT	2 cut(s)	15, 391
HpyCH4V	TGCA	9 cut(s)	159, 249, 572, 802, 806, 929, 1121, 1250, 1946
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1127, 1188, 1657, 1679
HpyF3I	CTNAG	8 cut(s)	150, 222, 227, 381, 867, 1053, 1295, 1316
HpySE526I	ACGT	2 cut(s)	15, 391
HspAI	GCGC	2 cut(s)	68, 141
Kpn2I	TCCGGA	1 cut(s)	1993
Ksp22I	TGATCA	1 cut(s)	1372
KspI	CCGCGG	1 cut(s)	42
Kzo9I	GATC	9 cut(s)	232, 397, 409, 1153, 1235, 1372, 1771, 1880, 2062
LmnI	GCTCC	1 cut(s)	1021
Lsp1109I	GCAGC	9 cut(s)	171, 412, 616, 847, 941, 1105, 1262, 1570, 1767
LweI	GCATC	4 cut(s)	1105, 1237, 1767, 1962
MaeI	CTAG	4 cut(s)	747, 1382, 1620, 2069
MaeII	ACGT	2 cut(s)	15, 391
MaeIII	GTNAC	7 cut(s)	85, 184, 685, 897, 1209, 1359, 1598
MalI	GATC	9 cut(s)	234, 399, 411, 1155, 1237, 1374, 1773, 1882, 2064
MboI	GATC	9 cut(s)	232, 397, 409, 1153, 1235, 1372, 1771, 1880, 2062
MboII	GAAGA	7 cut(s)	275, 419, 483, 781, 972, 1128, 1724
MfeI	CAATTG	2 cut(s)	506, 1698
MflI	RGATCY	2 cut(s)	409, 1235
MhlI	GDGCHC	2 cut(s)	746, 1277
MlsI	TGGCCA	1 cut(s)	1651
MluCI	AATT	8 cut(s)	362, 506, 526, 880, 1342, 1561, 1698, 1834
MluNI	TGGCCA	1 cut(s)	1651
MlyI	GAGTC	4 cut(s)	496, 1367, 1387, 1925
MmeI	TCCRAC	3 cut(s)	291, 437, 1773
Mox20I	TGGCCA	1 cut(s)	1651
MroI	TCCGGA	1 cut(s)	1993
MscI	TGGCCA	1 cut(s)	1651
MseI	TTAA	9 cut(s)	459, 666, 752, 810, 911, 1023, 1577, 1911, 1932
MslI	CAYNNNNRTG	2 cut(s)	282, 739
Msp20I	TGGCCA	1 cut(s)	1651
MspA1I	CMGCKG	2 cut(s)	41, 629
MspCI	CTTAAG	1 cut(s)	665
MspI	CCGG	2 cut(s)	26, 1994
MspR9I	CCNGG	5 cut(s)	274, 348, 606, 1759, 1899
MunI	CAATTG	2 cut(s)	506, 1698
Mva1269I	GAATGC	4 cut(s)	196, 1073, 1336, 1960
MvaI	CCWGG	5 cut(s)	274, 348, 606, 1759, 1899
MvnI	CGCG	2 cut(s)	41, 123
MwoI	GCNNNNNNNGC	4 cut(s)	1127, 1188, 1657, 1679
NcoI	CCATGG	1 cut(s)	1205
NdeI	CATATG	1 cut(s)	1720
NdeII	GATC	9 cut(s)	232, 397, 409, 1153, 1235, 1372, 1771, 1880, 2062
NlaIV	GGNNCC	5 cut(s)	45, 278, 1414, 1747, 1992
NmeAIII	GCCGAG	2 cut(s)	864, 1208
NmuCI	GTSAC	4 cut(s)	897, 1209, 1359, 1598
NspI	RCATGY	2 cut(s)	806, 1281
NspV	TTCGAA	1 cut(s)	1493
PaeI	GCATGC	1 cut(s)	806
PagI	TCATGA	1 cut(s)	679
PcsI	WCGNNNNNNNCGW	3 cut(s)	397, 1462, 1490
PctI	GAATGC	4 cut(s)	196, 1073, 1336, 1960
PleI	GAGTC	4 cut(s)	496, 1366, 1386, 1924
PmaCI	CACGTG	1 cut(s)	392
PmlI	CACGTG	1 cut(s)	392
PpsI	GAGTC	4 cut(s)	496, 1366, 1386, 1924
Ppu21I	YACGTR	1 cut(s)	392
Psp6I	CCWGG	5 cut(s)	272, 346, 604, 1757, 1897
PspCI	CACGTG	1 cut(s)	392
PspFI	CCCAGC	1 cut(s)	80
PspGI	CCWGG	5 cut(s)	272, 346, 604, 1757, 1897
PspN4I	GGNNCC	5 cut(s)	45, 278, 1414, 1747, 1992
PspPI	GGNCC	4 cut(s)	118, 467, 1075, 1746
PsrI	GAACNNNNNNTAC	2 cut(s)	1225, 1257
PstI	CTGCAG	1 cut(s)	1948
PstNI	CAGNNNCTG	3 cut(s)	632, 935, 1780
PsuI	RGATCY	2 cut(s)	409, 1235
PvuII	CAGCTG	1 cut(s)	629
RsaI	GTAC	4 cut(s)	202, 333, 657, 1615
RsaNI	GTAC	4 cut(s)	201, 332, 656, 1614
RseI	CAYNNNNRTG	2 cut(s)	282, 739
Rsr2I	CGGWCCG	1 cut(s)	118
RsrII	CGGWCCG	1 cut(s)	118
SacII	CCGCGG	1 cut(s)	42
SaqAI	TTAA	9 cut(s)	459, 666, 752, 810, 911, 1023, 1577, 1911, 1932
Sau3AI	GATC	9 cut(s)	232, 397, 409, 1153, 1235, 1372, 1771, 1880, 2062
Sau96I	GGNCC	4 cut(s)	118, 467, 1075, 1746
ScaI	AGTACT	1 cut(s)	202
SchI	GAGTC	4 cut(s)	496, 1367, 1387, 1925
ScrFI	CCNGG	5 cut(s)	274, 348, 606, 1759, 1899
SduI	GDGCHC	2 cut(s)	746, 1277
SfaNI	GCATC	4 cut(s)	1105, 1237, 1767, 1962
SfcI	CTRYAG	2 cut(s)	1231, 1944
Sfr303I	CCGCGG	1 cut(s)	42
SfuI	TTCGAA	1 cut(s)	1493
SgrBI	CCGCGG	1 cut(s)	42
SinI	GGWCC	3 cut(s)	118, 467, 1746
SmiMI	CAYNNNNRTG	2 cut(s)	282, 739
SmlI	CTYRAG	2 cut(s)	101, 665
SmoI	CTYRAG	2 cut(s)	101, 665
SphI	GCATGC	1 cut(s)	806
Sse9I	AATT	8 cut(s)	362, 506, 526, 880, 1342, 1561, 1698, 1834
SsiI	CCGC	8 cut(s)	8, 39, 41, 121, 194, 1392, 1736, 1925
SspI	AATATT	1 cut(s)	1312
SspMI	CTAG	4 cut(s)	747, 1382, 1620, 2069
StyD4I	CCNGG	5 cut(s)	272, 346, 604, 1757, 1897
StyI	CCWWGG	2 cut(s)	1205, 1282
TaaI	ACNGT	5 cut(s)	91, 336, 903, 1232, 1260
TaiI	ACGT	2 cut(s)	18, 394
TaqI	TCGA	3 cut(s)	400, 1456, 1493
TasI	AATT	8 cut(s)	362, 506, 526, 880, 1342, 1561, 1698, 1834
TatI	WGTACW	2 cut(s)	200, 655
TauI	GCSGC	1 cut(s)	41
Tru1I	TTAA	9 cut(s)	459, 666, 752, 810, 911, 1023, 1577, 1911, 1932
Tru9I	TTAA	9 cut(s)	459, 666, 752, 810, 911, 1023, 1577, 1911, 1932
TscAI	CASTG	5 cut(s)	154, 235, 251, 1235, 1342
TseFI	GTSAC	4 cut(s)	897, 1209, 1359, 1598
TseI	GCWGC	9 cut(s)	159, 425, 629, 835, 929, 1118, 1250, 1583, 1780
Tsp45I	GTSAC	4 cut(s)	897, 1209, 1359, 1598
TspDTI	ATGAA	8 cut(s)	228, 732, 955, 972, 1122, 1311, 1461, 1691
TspGWI	ACGGA	2 cut(s)	118, 2057
TspRI	CASTG	5 cut(s)	154, 235, 251, 1235, 1342
Vha464I	CTTAAG	1 cut(s)	665
VpaK11BI	GGWCC	3 cut(s)	118, 467, 1746
XceI	RCATGY	2 cut(s)	806, 1281
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1765
XmiI	GTMKAC	1 cut(s)	1871
XspI	CTAG	4 cut(s)	747, 1382, 1620, 2069
ZrmI	AGTACT	1 cut(s)	202

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.