Rh7DG159400

isoform X1

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
14125540 .. 14131896
6357 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG159400.1

Sequence Viewer

Length: 1515 bp
ATGGATTCGGTTGAATTGACTTATCACATGAAAGGATTTCTCAGAGCTGGAGTTACAGTCAAGGAGCTGGAGCCTTGTGACGTCGGCCGGCTTGTAAGCCCGGAGCTGTGCAGCTCATCTCGAAGTTATAAAGATGTAACAGTTGGTTCTTCAAAGTCTGAATCATCTAAGCTTGACGGTCAGCATCGCAGCTATCAGGGTGAAGACTTGTCCAGGCACCTTCATGCCAGGGGCAGAAATGGGTTTTTGTTAAATCATGGCATTGAAAGTGTACAATTACAACGGAAATCAGTGAAGGTGTCAAAAACAGGTAGTTTGCCTTTTAAGAGACCACGACTCAGTCAACTAGAAGATTCAGATAGCTTAACTGGAGTTGATGGGATAAAGGACATGCCAGATAAGCTTGGCTCATATCTTGCAAAGTGCAATTCTGCAGATAAGACTCAATTGGCGAAACAAAAGACCAAATTTACAAGCAAGCGAGGTGATAAGAGAAATCACAAACTTCCTGTAAAGACTAAAAACGATTCCTTCTCTGTGAAGGCAGGTTTGGCAAGCTTCAGTTCGGCTGCTGGAGGGAACAATTTCTTTGGAGTACATGGCCTTAAGTCAGATAATCATGATGTTACAAAGCATGTAGATGATCTGCCACTGAATGAGCTTCTTGATGGCACATACAAACATCTCAGTTTGGGTAAGGACAAAGGAAAGAAACCAGTGAATGTTAACGATAGTTTTTTGCATTCAATTAGAAAGGCTTGTTCTATCCTTCAGCGCCCGAGGTCTGTTCAGCCCCAACATAATGCTGAACTAGATAGTCATTCCGAAATGAAAATGTCATCTTTGCCGTTAGGCACAGCTGCTGTTGTAGCTAATGGTGTTAATGGTGATAAAGGAGAATCATCCATAACAGATCTGTCTTCATCTAACAAGGTACATGATTCTTGTAGCAGGCCTGATAGTCCTGCTAATCCCCTTGATATGCCATTAAGTCATCCTAATTATATTTTGGAACGCTTCGATCTTCCTCATCACAAGGATTTGGAATCTTTGCTTCTGGATGCCATGAAGCCTGGTTTATTTTCAAAAAGTACTTCTGATCCATGCTCAGGCAAGCAAATGTCTCGGCAAGCAAGTTTGCCACCTTTCCCGTGGTCAAATACTTCTAGTTGGCATTGTAGAAGCAGTTCGGATACAGCAAAATTGTCTACAAGTAGGGGCTCATGTCAAGGCCGATGGCTAAAAATAGAGAGGAATACTGTTACTTCATTGGGAATTGCCACTAGTAATTTTACTGACTTGGAGTCAATGACTTATGATCAGAGTCTAGTTCCTTCCGCAAGACTGAAAATGGCTTCTTCAACAGATAAAATTTCCCCAACCATATCTGTTCTACCTCAGTGTGAGTTGGATTCATCAGCTCCTGCAACATGTTTGAATGAATCATATGCTGTTTTAGACTCCGGAGGGAAGGTGAATCACTCAGGAAATAGTAATGGTACAGTTTCTACCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

504

Amino Acids

54.69

Weight (kDa)

9.03

Isoelectric Point (pI)

50.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 129
AatII GACGTC 1 cut(s) 84
Acc36I ACCTGC 1 cut(s) 536
AccB1I GGYRCC 1 cut(s) 216
AccI GTMKAC 1 cut(s) 1208
AccIII TCCGGA 1 cut(s) 1463
AciI CCGC 1 cut(s) 1338
AclWI GGATC 1 cut(s) 1094
AcoI YGGCCR 1 cut(s) 85
AcsI RAATTY 2 cut(s) 467, 1371
AcuI CTGAAG 2 cut(s) 544, 755
AcyI GRCGYC 1 cut(s) 81
AfaI GTAC 5 cut(s) 273, 597, 936, 1093, 1501
AfiI CCNNNNNNNGG 1 cut(s) 1109
AflII CTTAAG 1 cut(s) 605
AflIII ACRYGT 1 cut(s) 1430
AgsI TTSAA 7 cut(s) 14, 153, 266, 747, 1086, 1362, 1438
AhdI GACNNNNNGTC 1 cut(s) 1303
AhlI ACTAGT 1 cut(s) 1283
AjnI CCWGG 3 cut(s) 212, 227, 1072
AjuI GAANNNNNNNTTGG 2 cut(s) 533, 565
Alw26I GTCTC 2 cut(s) 322, 1128
AlwI GGATC 1 cut(s) 1094
AlwNI CAGNNNCTG 2 cut(s) 863, 1424
Ama87I CYCGRG 1 cut(s) 778
Aor13HI TCCGGA 1 cut(s) 1463
AoxI GGCC 4 cut(s) 85, 601, 953, 1231
ApeKI GCWGC 4 cut(s) 111, 189, 569, 860
ApoI RAATTY 2 cut(s) 467, 1371
Asp700I GAANNNNTTC 2 cut(s) 584, 1186
AspLEI GCGC 1 cut(s) 777
AsuC2I CCSGG 1 cut(s) 101
AsuHPI GGTGA 4 cut(s) 212, 497, 899, 1486
AvaI CYCGRG 1 cut(s) 778
BanI GGYRCC 1 cut(s) 216
BanII GRGCYC 1 cut(s) 1223
BbsI GAAGAC 2 cut(s) 210, 912
BbvI GCAGC 4 cut(s) 123, 201, 556, 847
BccI CCATC 3 cut(s) 371, 662, 1230
BceAI ACGGC 1 cut(s) 832
BcgI CGANNNNNNTGC 2 cut(s) 1106, 1140
BciT130I CCWGG 3 cut(s) 214, 229, 1074
BciVI GTATCC 1 cut(s) 1186
BclI TGATCA 1 cut(s) 1318
BcnI CCSGG 1 cut(s) 101
BcoDI GTCTC 2 cut(s) 322, 1128
BcuI ACTAGT 1 cut(s) 1283
BfaI CTAG 5 cut(s) 347, 812, 1167, 1284, 1328
BfmI CTRYAG 1 cut(s) 432
BfoI RGCGCY 1 cut(s) 778
BfrI CTTAAG 1 cut(s) 605
BfuAI ACCTGC 1 cut(s) 536
BfuI GTATCC 1 cut(s) 1186
BglII AGATCT 1 cut(s) 913
BisI GCNGC 4 cut(s) 112, 190, 570, 861
BlsI GCNGC 4 cut(s) 113, 191, 571, 862
BmcAI AGTACT 1 cut(s) 1093
Bme1390I CCNGG 4 cut(s) 101, 214, 229, 1074
BmeRI GACNNNNNGTC 1 cut(s) 1303
BmeT110I CYCGRG 1 cut(s) 778
BmiI GGNNCC 2 cut(s) 72, 218
BmrFI CCNGG 4 cut(s) 101, 214, 229, 1074
BmsI GCATC 2 cut(s) 193, 1051
BpiI GAAGAC 2 cut(s) 210, 912
BpmI CTGGAG 4 cut(s) 69, 89, 390, 594
Bpu10I CCTNAGC 1 cut(s) 1108
BpuMI CCSGG 1 cut(s) 101
BsaHI GRCGYC 1 cut(s) 81
BsaI GGTCTC 1 cut(s) 322
BsaJI CCNNGG 3 cut(s) 228, 779, 1151
BsaWI WCCGGW 1 cut(s) 1463
BsaXI ACNNNNNCTCC 4 cut(s) 42, 72, 1458, 1488
Bsc4I CCNNNNNNNGG 1 cut(s) 1109
Bse118I RCCGGY 1 cut(s) 87
Bse1I ACTGG 2 cut(s) 373, 716
BseAI TCCGGA 1 cut(s) 1463
BseBI CCWGG 3 cut(s) 214, 229, 1074
BseDI CCNNGG 3 cut(s) 228, 779, 1151
BseGI GGATG 3 cut(s) 902, 994, 1066
BseLI CCNNNNNNNGG 1 cut(s) 1109
BseMII CTCAG 6 cut(s) 55, 352, 700, 1122, 1412, 1497
BseNI ACTGG 2 cut(s) 373, 716
BseX3I CGGCCG 1 cut(s) 85
BseXI GCAGC 4 cut(s) 123, 201, 556, 847
BsgI GTGCAG 1 cut(s) 130
Bsh1285I CGRYCG 1 cut(s) 88
BshFI GGCC 4 cut(s) 87, 603, 955, 1233
BshNI GGYRCC 1 cut(s) 216
BsiEI CGRYCG 1 cut(s) 88
BsiHKCI CYCGRG 1 cut(s) 778
BsiSI CCGG 3 cut(s) 88, 101, 1464
BslI CCNNNNNNNGG 1 cut(s) 1109
BsmAI GTCTC 2 cut(s) 322, 1128
BsmI GAATGC 1 cut(s) 742
BsnI GGCC 4 cut(s) 87, 603, 955, 1233
Bso31I GGTCTC 1 cut(s) 322
BsoBI CYCGRG 1 cut(s) 778
Bsp1286I GDGCHC 1 cut(s) 1223
Bsp13I TCCGGA 1 cut(s) 1463
Bsp1407I TGTACA 1 cut(s) 271
Bsp143I GATC 5 cut(s) 643, 913, 1021, 1099, 1318
BspACI CCGC 1 cut(s) 1338
BspANI GGCC 4 cut(s) 87, 603, 955, 1233
BspCNI CTCAG 6 cut(s) 54, 351, 699, 1121, 1411, 1496
BspEI TCCGGA 1 cut(s) 1463
BspHI TCATGA 1 cut(s) 619
BspLI GGNNCC 2 cut(s) 72, 218
BspMAI CTGCAG 1 cut(s) 436
BspMI ACCTGC 1 cut(s) 536
BspPI GGATC 1 cut(s) 1094
BspT107I GGYRCC 1 cut(s) 216
BspTI CTTAAG 1 cut(s) 605
BspTNI GGTCTC 1 cut(s) 322
BsrFI RCCGGY 1 cut(s) 87
BsrGI TGTACA 1 cut(s) 271
BsrI ACTGG 2 cut(s) 373, 716
BssAI RCCGGY 1 cut(s) 87
BssECI CCNNGG 3 cut(s) 228, 779, 1151
BssMI GATC 5 cut(s) 643, 913, 1021, 1099, 1318
BssNI GRCGYC 1 cut(s) 81
Bst2UI CCWGG 3 cut(s) 214, 229, 1074
Bst4CI ACNGT 5 cut(s) 58, 142, 179, 1261, 1504
BstACI GRCGYC 1 cut(s) 81
BstAFI CTTAAG 1 cut(s) 605
BstAUI TGTACA 1 cut(s) 271
BstC8I GCNNGC 6 cut(s) 89, 479, 556, 953, 1115, 1131
BstDEI CTNAG 7 cut(s) 41, 168, 338, 686, 1108, 1398, 1483
BstDSI CCRYGG 1 cut(s) 1151
BstF5I GGATG 3 cut(s) 902, 994, 1066
BstH2I RGCGCY 1 cut(s) 778
BstHHI GCGC 1 cut(s) 777
BstKTI GATC 5 cut(s) 646, 916, 1024, 1102, 1321
BstMAI GTCTC 2 cut(s) 322, 1128
BstMBI GATC 5 cut(s) 643, 913, 1021, 1099, 1318
BstMCI CGRYCG 1 cut(s) 88
BstMWI GCNNNNNNNGC 3 cut(s) 400, 551, 869
BstNI CCWGG 3 cut(s) 214, 229, 1074
BstNSI RCATGY 3 cut(s) 394, 638, 1434
BstSCI CCNGG 4 cut(s) 99, 212, 227, 1072
BstSFI CTRYAG 1 cut(s) 432
BstV1I GCAGC 4 cut(s) 123, 201, 556, 847
BstV2I GAAGAC 2 cut(s) 210, 912
BstX2I RGATCY 1 cut(s) 913
BstYI RGATCY 1 cut(s) 913
BstZI CGGCCG 1 cut(s) 85
BsuI GTATCC 1 cut(s) 1186
BsuRI GGCC 4 cut(s) 87, 603, 955, 1233
BtgI CCRYGG 1 cut(s) 1151
BtgZI GCGATG 1 cut(s) 170
BtsCI GGATG 3 cut(s) 902, 994, 1066
BtsIMutI CAGTG 4 cut(s) 297, 650, 723, 1406
BveI ACCTGC 1 cut(s) 536
Cac8I GCNNGC 6 cut(s) 89, 479, 556, 953, 1115, 1131
CaiI CAGNNNCTG 2 cut(s) 863, 1424
CciI TCATGA 1 cut(s) 619
CfoI GCGC 1 cut(s) 777
Cfr10I RCCGGY 1 cut(s) 87
Csp6I GTAC 5 cut(s) 272, 596, 935, 1092, 1500
CviQI GTAC 5 cut(s) 272, 596, 935, 1092, 1500
DdeI CTNAG 7 cut(s) 41, 168, 338, 686, 1108, 1398, 1483
DpnI GATC 5 cut(s) 645, 915, 1023, 1101, 1320
DpnII GATC 5 cut(s) 643, 913, 1021, 1099, 1318
DriI GACNNNNNGTC 1 cut(s) 1303
EaeI YGGCCR 1 cut(s) 85
EagI CGGCCG 1 cut(s) 85
Eam1105I GACNNNNNGTC 1 cut(s) 1303
EclXI CGGCCG 1 cut(s) 85
Eco147I AGGCCT 1 cut(s) 955
Eco24I GRGCYC 1 cut(s) 1223
Eco31I GGTCTC 1 cut(s) 322
Eco52I CGGCCG 1 cut(s) 85
Eco57I CTGAAG 2 cut(s) 544, 755
Eco88I CYCGRG 1 cut(s) 778
EcoRII CCWGG 3 cut(s) 212, 227, 1072
EcoT38I GRGCYC 1 cut(s) 1223
FauNDI CATATG 1 cut(s) 1447
FbaI TGATCA 1 cut(s) 1318
FblI GTMKAC 1 cut(s) 1208
Fnu4HI GCNGC 4 cut(s) 112, 190, 570, 861
FokI GGATG 3 cut(s) 889, 981, 1073
FriOI GRGCYC 1 cut(s) 1223
Fsp4HI GCNGC 4 cut(s) 112, 190, 570, 861
FspBI CTAG 5 cut(s) 347, 812, 1167, 1284, 1328
GlaI GCGC 1 cut(s) 776
GluI GCNGC 4 cut(s) 112, 190, 570, 861
GsuI CTGGAG 4 cut(s) 69, 89, 390, 594
HaeII RGCGCY 1 cut(s) 778
HaeIII GGCC 4 cut(s) 87, 603, 955, 1233
HapII CCGG 3 cut(s) 88, 101, 1464
HhaI GCGC 1 cut(s) 777
Hin1I GRCGYC 1 cut(s) 81
Hin6I GCGC 1 cut(s) 775
HinP1I GCGC 1 cut(s) 775
HincII GTYRAC 2 cut(s) 344, 727
HindII GTYRAC 2 cut(s) 344, 727
HindIII AAGCTT 3 cut(s) 170, 401, 556
HpaI GTTAAC 1 cut(s) 727
HpaII CCGG 3 cut(s) 88, 101, 1464
HphI GGTGA 4 cut(s) 212, 497, 899, 1486
Hpy166II GTNNAC 4 cut(s) 272, 344, 727, 1209
Hpy188I TCNGA 8 cut(s) 44, 160, 358, 613, 826, 1099, 1192, 1323
Hpy188III TCNNGA 6 cut(s) 120, 620, 665, 1058, 1464, 1485
Hpy8I GTNNAC 4 cut(s) 272, 344, 727, 1209
Hpy99I CGWCG 1 cut(s) 86
HpyAV CCTTC 7 cut(s) 230, 289, 535, 541, 779, 1344, 1465
HpyCH4III ACNGT 5 cut(s) 58, 142, 179, 1261, 1504
HpyCH4IV ACGT 1 cut(s) 81
HpyCH4V TGCA 6 cut(s) 111, 419, 426, 434, 742, 1427
HpyF10VI GCNNNNNNNGC 3 cut(s) 400, 551, 869
HpyF3I CTNAG 7 cut(s) 41, 168, 338, 686, 1108, 1398, 1483
HpySE526I ACGT 1 cut(s) 81
Hsp92I GRCGYC 1 cut(s) 81
HspAI GCGC 1 cut(s) 775
Kpn2I TCCGGA 1 cut(s) 1463
KroI GCCGGC 1 cut(s) 87
KroNI GCCGGC 1 cut(s) 89
Ksp22I TGATCA 1 cut(s) 1318
KspAI GTTAAC 1 cut(s) 727
Kzo9I GATC 5 cut(s) 643, 913, 1021, 1099, 1318
LmnI GCTCC 4 cut(s) 64, 70, 103, 1426
Lsp1109I GCAGC 4 cut(s) 123, 201, 556, 847
LweI GCATC 2 cut(s) 193, 1051
MaeI CTAG 5 cut(s) 347, 812, 1167, 1284, 1328
MaeII ACGT 1 cut(s) 81
MaeIII GTNAC 5 cut(s) 52, 77, 136, 625, 1261
MalI GATC 5 cut(s) 645, 915, 1023, 1101, 1320
MboI GATC 5 cut(s) 643, 913, 1021, 1099, 1318
MboII GAAGA 6 cut(s) 141, 215, 362, 912, 1016, 1350
MfeI CAATTG 1 cut(s) 446
MflI RGATCY 1 cut(s) 913
MhlI GDGCHC 1 cut(s) 1223
MlyI GAGTC 5 cut(s) 330, 436, 1313, 1333, 1454
MmeI TCCRAC 1 cut(s) 1389
MnlI CCTC 7 cut(s) 476, 569, 774, 1038, 1245, 1407, 1460
MroI TCCGGA 1 cut(s) 1463
MroNI GCCGGC 1 cut(s) 87
MroXI GAANNNNTTC 2 cut(s) 584, 1186
MseI TTAA 7 cut(s) 251, 324, 365, 606, 726, 882, 989
MslI CAYNNNNRTG 2 cut(s) 222, 639
MspA1I CMGCKG 1 cut(s) 860
MspCI CTTAAG 1 cut(s) 605
MspI CCGG 3 cut(s) 88, 101, 1464
MspR9I CCNGG 4 cut(s) 101, 214, 229, 1074
MunI CAATTG 1 cut(s) 446
Mva1269I GAATGC 1 cut(s) 742
MvaI CCWGG 3 cut(s) 214, 229, 1074
MwoI GCNNNNNNNGC 3 cut(s) 400, 551, 869
NaeI GCCGGC 1 cut(s) 89
NciI CCSGG 1 cut(s) 101
NdeI CATATG 1 cut(s) 1447
NdeII GATC 5 cut(s) 643, 913, 1021, 1099, 1318
NgoMIV GCCGGC 1 cut(s) 87
NlaIV GGNNCC 2 cut(s) 72, 218
NmeAIII GCCGAG 1 cut(s) 1105
NmuCI GTSAC 1 cut(s) 77
NspI RCATGY 3 cut(s) 394, 638, 1434
PagI TCATGA 1 cut(s) 619
PceI AGGCCT 1 cut(s) 955
PciI ACATGT 1 cut(s) 1430
PctI GAATGC 1 cut(s) 742
PdiI GCCGGC 1 cut(s) 89
PdmI GAANNNNTTC 2 cut(s) 584, 1186
PflFI GACNNNGTC 1 cut(s) 339
PkrI GCNGC 4 cut(s) 113, 191, 571, 862
PleI GAGTC 5 cut(s) 330, 436, 1312, 1332, 1454
PpsI GAGTC 5 cut(s) 330, 436, 1312, 1332, 1454
PscI ACATGT 1 cut(s) 1430
PsiI TTATAA 1 cut(s) 129
Psp6I CCWGG 3 cut(s) 212, 227, 1072
PspGI CCWGG 3 cut(s) 212, 227, 1072
PspN4I GGNNCC 2 cut(s) 72, 218
PsrI GAACNNNNNNTAC 2 cut(s) 1171, 1203
PstI CTGCAG 1 cut(s) 436
PstNI CAGNNNCTG 2 cut(s) 863, 1424
PsuI RGATCY 1 cut(s) 913
PsyI GACNNNGTC 1 cut(s) 339
PvuII CAGCTG 1 cut(s) 860
RsaI GTAC 5 cut(s) 273, 597, 936, 1093, 1501
RsaNI GTAC 5 cut(s) 272, 596, 935, 1092, 1500
RseI CAYNNNNRTG 2 cut(s) 222, 639
SaqAI TTAA 7 cut(s) 251, 324, 365, 606, 726, 882, 989
SatI GCNGC 4 cut(s) 112, 190, 570, 861
Sau3AI GATC 5 cut(s) 643, 913, 1021, 1099, 1318
ScaI AGTACT 1 cut(s) 1093
SchI GAGTC 5 cut(s) 330, 436, 1313, 1333, 1454
ScrFI CCNGG 4 cut(s) 101, 214, 229, 1074
SduI GDGCHC 1 cut(s) 1223
SfaNI GCATC 2 cut(s) 193, 1051
SfcI CTRYAG 1 cut(s) 432
SmiMI CAYNNNNRTG 2 cut(s) 222, 639
SmlI CTYRAG 1 cut(s) 605
SmoI CTYRAG 1 cut(s) 605
SpeI ACTAGT 1 cut(s) 1283
SseBI AGGCCT 1 cut(s) 955
SsiI CCGC 1 cut(s) 1338
SspMI CTAG 5 cut(s) 347, 812, 1167, 1284, 1328
StuI AGGCCT 1 cut(s) 955
StyD4I CCNGG 4 cut(s) 99, 212, 227, 1072
TaaI ACNGT 5 cut(s) 58, 142, 179, 1261, 1504
TaiI ACGT 1 cut(s) 84
TaqI TCGA 2 cut(s) 121, 1020
TatI WGTACW 3 cut(s) 271, 595, 1091
Tru1I TTAA 7 cut(s) 251, 324, 365, 606, 726, 882, 989
Tru9I TTAA 7 cut(s) 251, 324, 365, 606, 726, 882, 989
TscAI CASTG 4 cut(s) 297, 657, 723, 1406
TseFI GTSAC 1 cut(s) 77
TseI GCWGC 4 cut(s) 111, 189, 569, 860
Tsp45I GTSAC 1 cut(s) 77
TspDTI ATGAA 8 cut(s) 44, 212, 845, 912, 1082, 1257, 1404, 1455
TspGWI ACGGA 1 cut(s) 298
TspRI CASTG 4 cut(s) 297, 657, 723, 1406
Tth111I GACNNNGTC 1 cut(s) 339
Vha464I CTTAAG 1 cut(s) 605
XapI RAATTY 2 cut(s) 467, 1371
XceI RCATGY 3 cut(s) 394, 638, 1434
XcmI CCANNNNNNNNNTGG 1 cut(s) 1149
XmiI GTMKAC 1 cut(s) 1208
XmnI GAANNNNTTC 2 cut(s) 584, 1186
XspI CTAG 5 cut(s) 347, 812, 1167, 1284, 1328
ZraI GACGTC 1 cut(s) 82
ZrmI AGTACT 1 cut(s) 1093
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.