Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0005888

Physical Location & Seq

Genomic Coordinates Forward (+)

13575026 .. 13579999

Gene Structure 4974 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom14g10800.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

ATGGAAGCGGTGGACTTGAGTTTTCCCGTGGATGTAGCCACCGTGCCGAAGTTTTTGGGTGTGGAGGCGCTTGTGAGAGCTGGGGTTACAGTCAAGGAGCTAGAACCTTGTGATTCGGACCGCGTTTCGGTTCGAGTTACCTCATACACCGAGGCTTGCAGCTCATCGTTGAGGGATAAAGAGGTAACGAATGCGGTTAGTACTTCAGAGAATGAACCAATTAAGCTCGGTGATATGATGTGCCGCGGCAGCTATCAGGGTGAAGAATTGTCCAGGCATCTACATGGCAGGGGAAAAAATGGTTTTTTGTTGGATACTGGTGCTGTTAGTGTACAGTTAGAACGGAAACCAGGAAAGTTGTCAAAATTGGGCAGTTTATCTAAGAGACCACGTGTTGCTCGATTTGAAGATCCAACAAGCCTTGTTGAAGTTGACGGGATAAAGGATATGTCATATAAGCTTGGATCTTTACTTATAAAGTGTGGTTCATCAGATAAGACTCAGTTGGTGAAACAAAAGAACAACTCTACAAGCAAGCGAGGTGAAAAGAGAAATCTCAAACTTCCTGCAAAGACTAAACACGATTCCTTCTCTGTAAAGCCTGGTTTGGCAAGCTTCAGTTCAGCTGCTGGTGGAAACAACTTTTATGGAGTACATGGCCTTAAGTCAGATAATCACGATGTTACACAGCTGGTAGACGATGTGCCACTGAATGAGCTCCTTGATGGGACATACAAGTGTCCTAGCTTAGGCAGGGGAAAAGGGAAGAGACCAGCAAATGTAAATGATAGTTTTCTGCATGCAGTTAAAAAGGCTTGTTCTACCCTTCAGCAACCGAGGTCTGTTCAGCCCCAACTTAATGCTGAAGTAGACAGCAATCCCGACAAGATAATGTCGCCATGGCCGTTATGCACAACTTCTGTTGTAGCTTCTGGTGTCGATAGTGATAAAGGAGAGCCATTCATCACAGGTTTGTCTTCATGTAATGAGGTACAGGATTCACATAGAAAGCCTGATGCTCCTGCTAATCCCCTTGATTTGCCATTGTGTCAACCTAAGTATGTCTTGGGACGCTTGGCCCTTCCTCCACCCAAGGATTTGGAATCTTTGCTTTTGGATGCTGCAAAACCTGCTTCATCTTCAAGAAATACTCCTGATCCATGTTCAGGCAGACAAATATCTCGCCGAGCAAGCTTGCCTCCTTTTTCATGGTCACATACTTCTAATGGGCACTGTAGAACCAGTTCCGATGCGGCCAAACAGTCCACAAGCAGGGGTACATGCCAAGGCCGATGGCTAAGAATAGAGAGGAATATTCTTAGTTCATTGTGGGTTGCCACTAGTAATTTGACAGACTTGGAGTCACTCAGCTATAATCAAAGTCTAGTTCCTTCTGCAAGGCTAAAAGTGGCTGGTTCCCACGATAAAGTTTGCCCATCCATATCTGTTAGTCTTCCTCAGTGTCAACAAGATTCGTTATCTAACGCAACATGTCCCAAAGATTCCTACATTCCGCAAGAATCTGGAGGCAAGCTGAAGCAGACGGGAGATTGTAACGATGAGCATTGTCCAAAAGTATTAAGTGCTGCTCGAACACTTTGTGACATGGCAACTCGTCCCTCAAGGAAAAATCCAGATGGAATCATAAGGTGGCCAAAGAAGCCTTCACAAAAAGCCATGAAGGCTCGGAAGTTGAAATCAATTGAGAAACCTGAAGAAGCATATGGAACATCAGTTGCAGTATCTGGGTCCGACAATCCTGGGAGAAGCGTGGATCGGATGCTGCCTCCAAAGAAGCCCAAGCTCTCCTTGAATGATGATAAAAGGGATTTCAATAATTTTAGTTCTGTAAGGAAAGGACCAATAAATTGGTCTACGCCCAGATCAAGTAGGTCATCACCTAGCAGATCAATTAAGGGGTCAATTGTGGATATTAGACATTCAACAGCGGATGTAGTAAAGCATTCCTATATGATGCCACCACCAGGTCGGGTTCCAGAAAAGACTTCAAACAGACAAGCGAAGCAAAGAAAGTTATTGGTAACGGAATGGAACCGAGGAAGGGACCGGCTAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

693

Amino Acids

75.45

Weight (kDa)

9.5

Isoelectric Point (pI)

43.73

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005888)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64050 AT1G64050
fragaria_vesca	FvH4_5g03290 FvH4_5g03290 FvH4_5g03290
malus_domestica	MD06G1092500.v1.1 MD14G1113000.v1.1
prunus_persica	Prupe.5G107200_v2.0.a1 Prupe.5G107200_v2.0.a1 Prupe.5G107200_v2.0.a1 Prupe.5G107200_v2.0.a1 Prupe.5G107200_v2.0.a1 Prupe.5G107200_v2.0.a1 Prupe.5G107200_v2.0.a1 Prupe.5G107200_v2.0.a1
pyrus_communis	pycom06g08830 pycom14g10800
rosa_chinensis	RchiOBHm_Chr7g0196491
rosa_laevigata	RLG00000004009
rosa_multiflora	Rmu_sc0005497.1_g000004
rosa_roxburghii	Rroxscaffold_3G00259250
rosa_rugosa	Rorug07G0034000 Rorug07G0034100
rosa_samantha	Rh7AG158300 Rh7BG160200 Rh7CG166600 Rh7DG159400
rosa_wichuraiana	Rw7G013830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	476
Acc36I	ACCTGC	1 cut(s)	1138
AccI	GTMKAC	3 cut(s)	696, 870, 1874
AccII	CGCG	2 cut(s)	123, 246
AciI	CCGC	8 cut(s)	8, 121, 194, 244, 246, 1253, 1514, 1949
AclWI	GGATC	4 cut(s)	404, 472, 1151, 1782
AcoI	YGGCCR	3 cut(s)	902, 1254, 1652
AcuI	CTGAAG	6 cut(s)	189, 601, 812, 885, 1556, 1734
AcvI	CACGTG	1 cut(s)	392
AdeI	CACNNNGTG	1 cut(s)	1601
AfaI	GTAC	5 cut(s)	202, 333, 654, 993, 1279
AfiI	CCNNNNNNNGG	6 cut(s)	127, 749, 1166, 1272, 1985, 2062
AflII	CTTAAG	1 cut(s)	662
AflIII	ACRYGT	2 cut(s)	391, 1490
AgsI	TTSAA	8 cut(s)	407, 428, 1143, 1696, 1813, 1834, 1944, 2010
AhdI	GACNNNNNGTC	1 cut(s)	1360
AhlI	ACTAGT	1 cut(s)	1340
AjnI	CCWGG	5 cut(s)	272, 349, 601, 1759, 1984
AjuI	GAANNNNNNNTTGG	2 cut(s)	1648, 1680
Alw21I	GWGCWC	1 cut(s)	720
Alw26I	GTCTC	2 cut(s)	379, 763
AlwI	GGATC	4 cut(s)	404, 472, 1151, 1782
AlwNI	CAGNNNCTG	2 cut(s)	629, 1745
AoxI	GGCC	6 cut(s)	658, 902, 1077, 1254, 1288, 1652
ApeKI	GCWGC	6 cut(s)	159, 249, 626, 1121, 1586, 1783
Asp700I	GAANNNNTTC	1 cut(s)	1243
AspLEI	GCGC	1 cut(s)	70
AspS9I	GGNCC	5 cut(s)	118, 1078, 1749, 1859, 2065
AsuHPI	GGTGA	5 cut(s)	242, 272, 520, 554, 1890
AvaII	GGWCC	4 cut(s)	118, 1749, 1859, 2065
BaeGI	GKGCMC	1 cut(s)	1233
BalI	TGGCCA	1 cut(s)	1654
BanII	GRGCYC	1 cut(s)	720
BbrPI	CACGTG	1 cut(s)	392
BbsI	GAAGAC	2 cut(s)	969, 1445
Bbv12I	GWGCWC	1 cut(s)	720
BbvI	GCAGC	6 cut(s)	171, 261, 613, 1108, 1573, 1770
BccI	CCATC	4 cut(s)	719, 1287, 1444, 1631
BceAI	ACGGC	1 cut(s)	889
BciT130I	CCWGG	5 cut(s)	274, 351, 603, 1761, 1986
BciVI	GTATCC	1 cut(s)	307
BcoDI	GTCTC	2 cut(s)	379, 763
BcuI	ACTAGT	1 cut(s)	1340
BfaI	CTAG	6 cut(s)	101, 744, 1341, 1385, 1902, 2072
BfmI	CTRYAG	1 cut(s)	1234
BfoI	RGCGCY	1 cut(s)	71
BfrI	CTTAAG	1 cut(s)	662
BfuAI	ACCTGC	1 cut(s)	1138
BfuI	GTATCC	1 cut(s)	307
BglI	GCCNNNNNGGC	1 cut(s)	1682
BisI	GCNGC	9 cut(s)	160, 244, 247, 250, 627, 1122, 1254, 1587, 1784
BlsI	GCNGC	9 cut(s)	161, 245, 248, 251, 628, 1123, 1255, 1588, 1785
BmcAI	AGTACT	1 cut(s)	202
Bme1390I	CCNGG	5 cut(s)	274, 351, 603, 1761, 1986
Bme18I	GGWCC	4 cut(s)	118, 1749, 1859, 2065
BmeRI	GACNNNNNGTC	1 cut(s)	1360
BmgT120I	GGNCC	5 cut(s)	118, 1078, 1749, 1859, 2065
BmiI	GGNNCC	5 cut(s)	1417, 1750, 1995, 2054, 2066
BmrFI	CCNGG	5 cut(s)	274, 351, 603, 1761, 1986
BmsI	GCATC	6 cut(s)	286, 1006, 1108, 1240, 1770, 1965
BpiI	GAAGAC	2 cut(s)	969, 1445
BpmI	CTGGAG	1 cut(s)	1545
Bpu10I	CCTNAGC	1 cut(s)	748
BpuEI	CTTGAG	2 cut(s)	37, 1606
BsaAI	YACGTR	1 cut(s)	392
BsaI	GGTCTC	2 cut(s)	379, 763
BsaJI	CCNNGG	9 cut(s)	27, 150, 244, 836, 899, 1092, 1285, 1760, 2056
Bsc4I	CCNNNNNNNGG	6 cut(s)	127, 749, 1166, 1272, 1985, 2062
Bse118I	RCCGGY	1 cut(s)	2067
Bse1I	ACTGG	2 cut(s)	322, 1242
BseBI	CCWGG	5 cut(s)	274, 351, 603, 1761, 1986
BseDI	CCNNGG	9 cut(s)	27, 150, 244, 836, 899, 1092, 1285, 1760, 2056
BseGI	GGATG	5 cut(s)	37, 1123, 1436, 1785, 1957
BseLI	CCNNNNNNNGG	6 cut(s)	127, 749, 1166, 1272, 1985, 2062
BseMII	CTCAG	3 cut(s)	515, 1381, 1472
BseNI	ACTGG	2 cut(s)	322, 1242
BseSI	GKGCMC	1 cut(s)	1233
BseXI	GCAGC	6 cut(s)	171, 261, 613, 1108, 1573, 1770
BseYI	CCCAGC	1 cut(s)	80
Bsh1236I	CGCG	2 cut(s)	123, 246
BshFI	GGCC	6 cut(s)	660, 904, 1079, 1256, 1290, 1654
BsiHKAI	GWGCWC	1 cut(s)	720
BsiSI	CCGG	1 cut(s)	2068
BslFI	GGGAC	4 cut(s)	742, 1083, 1479, 1602
BslI	CCNNNNNNNGG	6 cut(s)	127, 749, 1166, 1272, 1985, 2062
BsmAI	GTCTC	2 cut(s)	379, 763
BsmFI	GGGAC	4 cut(s)	742, 1083, 1479, 1602
BsmI	GAATGC	2 cut(s)	196, 1963
BsnI	GGCC	6 cut(s)	660, 904, 1079, 1256, 1290, 1654
Bso31I	GGTCTC	2 cut(s)	379, 763
Bsp1286I	GDGCHC	2 cut(s)	720, 1233
Bsp1407I	TGTACA	1 cut(s)	331
Bsp143I	GATC	6 cut(s)	409, 464, 1156, 1774, 1883, 1907
Bsp19I	CCATGG	1 cut(s)	899
BspACI	CCGC	8 cut(s)	8, 121, 194, 244, 246, 1253, 1514, 1949
BspANI	GGCC	6 cut(s)	660, 904, 1079, 1256, 1290, 1654
BspCNI	CTCAG	3 cut(s)	514, 1380, 1471
BspFNI	CGCG	2 cut(s)	123, 246
BspLI	GGNNCC	5 cut(s)	1417, 1750, 1995, 2054, 2066
BspMI	ACCTGC	1 cut(s)	1138
BspPI	GGATC	4 cut(s)	404, 472, 1151, 1782
BspTI	CTTAAG	1 cut(s)	662
BspTNI	GGTCTC	2 cut(s)	379, 763
BsrFI	RCCGGY	1 cut(s)	2067
BsrGI	TGTACA	1 cut(s)	331
BsrI	ACTGG	2 cut(s)	322, 1242
BssAI	RCCGGY	1 cut(s)	2067
BssECI	CCNNGG	9 cut(s)	27, 150, 244, 836, 899, 1092, 1285, 1760, 2056
BssMI	GATC	6 cut(s)	409, 464, 1156, 1774, 1883, 1907
BssT1I	CCWWGG	3 cut(s)	899, 1092, 1285
Bst2UI	CCWGG	5 cut(s)	274, 351, 603, 1761, 1986
Bst4CI	ACNGT	5 cut(s)	43, 91, 336, 1235, 1263
Bst6I	CTCTTC	1 cut(s)	761
BstAFI	CTTAAG	1 cut(s)	662
BstAPI	GCANNNNNTGC	1 cut(s)	1130
BstAUI	TGTACA	1 cut(s)	331
BstBAI	YACGTR	1 cut(s)	392
BstC8I	GCNNGC	7 cut(s)	157, 536, 613, 801, 1192, 1196, 1532
BstDEI	CTNAG	8 cut(s)	381, 501, 748, 1056, 1298, 1319, 1367, 1458
BstDSI	CCRYGG	3 cut(s)	27, 244, 899
BstENI	CCTNNNNNAGG	1 cut(s)	747
BstF5I	GGATG	5 cut(s)	37, 1123, 1436, 1785, 1957
BstFNI	CGCG	2 cut(s)	123, 246
BstH2I	RGCGCY	1 cut(s)	71
BstHHI	GCGC	1 cut(s)	70
BstKTI	GATC	6 cut(s)	412, 467, 1159, 1777, 1886, 1910
BstMAI	GTCTC	2 cut(s)	379, 763
BstMBI	GATC	6 cut(s)	409, 464, 1156, 1774, 1883, 1907
BstMWI	GCNNNNNNNGC	5 cut(s)	249, 1130, 1191, 1660, 1682
BstNI	CCWGG	5 cut(s)	274, 351, 603, 1761, 1986
BstNSI	RCATGY	3 cut(s)	803, 1284, 1494
BstSCI	CCNGG	5 cut(s)	272, 349, 601, 1759, 1984
BstSFI	CTRYAG	1 cut(s)	1234
BstSLI	GKGCMC	1 cut(s)	1233
BstUI	CGCG	2 cut(s)	123, 246
BstV1I	GCAGC	6 cut(s)	171, 261, 613, 1108, 1573, 1770
BstV2I	GAAGAC	2 cut(s)	969, 1445
BstX2I	RGATCY	2 cut(s)	409, 464
BstXI	CCANNNNNNTGG	2 cut(s)	1099, 1869
BstYI	RGATCY	2 cut(s)	409, 464
BsuI	GTATCC	1 cut(s)	307
BsuRI	GGCC	6 cut(s)	660, 904, 1079, 1256, 1290, 1654
BtgI	CCRYGG	3 cut(s)	27, 244, 899
BtsCI	GGATG	5 cut(s)	37, 1123, 1436, 1785, 1957
BtsIMutI	CAGTG	3 cut(s)	707, 1231, 1466
BveI	ACCTGC	1 cut(s)	1138
Cac8I	GCNNGC	7 cut(s)	157, 536, 613, 801, 1192, 1196, 1532
CaiI	CAGNNNCTG	2 cut(s)	629, 1745
CfoI	GCGC	1 cut(s)	70
Cfr10I	RCCGGY	1 cut(s)	2067
Cfr13I	GGNCC	5 cut(s)	118, 1078, 1749, 1859, 2065
Cfr42I	CCGCGG	1 cut(s)	247
CpoI	CGGWCCG	1 cut(s)	118
CseI	GACGC	1 cut(s)	1080
CsiI	ACCWGGT	1 cut(s)	1984
Csp6I	GTAC	5 cut(s)	201, 332, 653, 992, 1278
CspI	CGGWCCG	1 cut(s)	118
CviQI	GTAC	5 cut(s)	201, 332, 653, 992, 1278
DdeI	CTNAG	8 cut(s)	381, 501, 748, 1056, 1298, 1319, 1367, 1458
DpnI	GATC	6 cut(s)	411, 466, 1158, 1776, 1885, 1909
DpnII	GATC	6 cut(s)	409, 464, 1156, 1774, 1883, 1907
DraIII	CACNNNGTG	1 cut(s)	1601
DriI	GACNNNNNGTC	1 cut(s)	1360
EaeI	YGGCCR	3 cut(s)	902, 1254, 1652
Eam1104I	CTCTTC	1 cut(s)	761
Eam1105I	GACNNNNNGTC	1 cut(s)	1360
EarI	CTCTTC	1 cut(s)	761
Ecl136II	GAGCTC	1 cut(s)	718
Eco130I	CCWWGG	3 cut(s)	899, 1092, 1285
Eco24I	GRGCYC	1 cut(s)	720
Eco31I	GGTCTC	2 cut(s)	379, 763
Eco47I	GGWCC	4 cut(s)	118, 1749, 1859, 2065
Eco53kI	GAGCTC	1 cut(s)	718
Eco57I	CTGAAG	6 cut(s)	189, 601, 812, 885, 1556, 1734
Eco72I	CACGTG	1 cut(s)	392
EcoICRI	GAGCTC	1 cut(s)	718
EcoNI	CCTNNNNNAGG	1 cut(s)	747
EcoRII	CCWGG	5 cut(s)	272, 349, 601, 1759, 1984
EcoT14I	CCWWGG	3 cut(s)	899, 1092, 1285
EcoT38I	GRGCYC	1 cut(s)	720
ErhI	CCWWGG	3 cut(s)	899, 1092, 1285
FalI	AAGNNNNNCTT	4 cut(s)	1049, 1081, 1793, 1825
FaqI	GGGAC	4 cut(s)	742, 1083, 1479, 1602
FauNDI	CATATG	1 cut(s)	1723
FblI	GTMKAC	3 cut(s)	696, 870, 1874
Fnu4HI	GCNGC	9 cut(s)	160, 244, 247, 250, 627, 1122, 1254, 1587, 1784
FokI	GGATG	5 cut(s)	44, 1130, 1423, 1792, 1964
FriOI	GRGCYC	1 cut(s)	720
Fsp4HI	GCNGC	9 cut(s)	160, 244, 247, 250, 627, 1122, 1254, 1587, 1784
FspBI	CTAG	6 cut(s)	101, 744, 1341, 1385, 1902, 2072
GlaI	GCGC	1 cut(s)	69
GluI	GCNGC	9 cut(s)	160, 244, 247, 250, 627, 1122, 1254, 1587, 1784
GsaI	CCCAGC	1 cut(s)	84
GsuI	CTGGAG	1 cut(s)	1545
HaeII	RGCGCY	1 cut(s)	71
HaeIII	GGCC	6 cut(s)	660, 904, 1079, 1256, 1290, 1654
HapII	CCGG	1 cut(s)	2068
HgaI	GACGC	1 cut(s)	1080
HhaI	GCGC	1 cut(s)	70
Hin6I	GCGC	1 cut(s)	68
HinP1I	GCGC	1 cut(s)	68
HincII	GTYRAC	3 cut(s)	433, 1052, 1466
HindII	GTYRAC	3 cut(s)	433, 1052, 1466
HindIII	AAGCTT	3 cut(s)	458, 613, 1192
HpaII	CCGG	1 cut(s)	2068
HphI	GGTGA	5 cut(s)	242, 272, 520, 554, 1890
Hpy166II	GTNNAC	9 cut(s)	13, 332, 433, 697, 871, 1052, 1266, 1466, 1875
Hpy188I	TCNGA	8 cut(s)	118, 208, 493, 670, 1249, 1689, 1753, 1779
Hpy188III	TCNNGA	7 cut(s)	677, 881, 1143, 1154, 1524, 1634, 1997
Hpy8I	GTNNAC	9 cut(s)	13, 332, 433, 697, 871, 1052, 1266, 1466, 1875
HpyAV	CCTTC	7 cut(s)	598, 836, 1091, 1401, 1674, 1675, 2055
HpyCH4III	ACNGT	5 cut(s)	43, 91, 336, 1235, 1263
HpyCH4IV	ACGT	1 cut(s)	391
HpyCH4V	TGCA	8 cut(s)	159, 569, 799, 803, 912, 1124, 1397, 1739
HpyF10VI	GCNNNNNNNGC	5 cut(s)	249, 1130, 1191, 1660, 1682
HpyF3I	CTNAG	8 cut(s)	381, 501, 748, 1056, 1298, 1319, 1367, 1458
HpySE526I	ACGT	1 cut(s)	391
HspAI	GCGC	1 cut(s)	68
KspI	CCGCGG	1 cut(s)	247
Kzo9I	GATC	6 cut(s)	409, 464, 1156, 1774, 1883, 1907
LmnI	GCTCC	3 cut(s)	97, 723, 1024
Lsp1109I	GCAGC	6 cut(s)	171, 261, 613, 1108, 1573, 1770
LweI	GCATC	6 cut(s)	286, 1006, 1108, 1240, 1770, 1965
MabI	ACCWGGT	1 cut(s)	1984
MaeI	CTAG	6 cut(s)	101, 744, 1341, 1385, 1902, 2072
MaeII	ACGT	1 cut(s)	391
MaeIII	GTNAC	9 cut(s)	85, 136, 184, 682, 1212, 1362, 1553, 1601, 2041
MalI	GATC	6 cut(s)	411, 466, 1158, 1776, 1885, 1909
MboI	GATC	6 cut(s)	409, 464, 1156, 1774, 1883, 1907
MboII	GAAGA	7 cut(s)	275, 419, 778, 969, 1131, 1445, 1727
MfeI	CAATTG	2 cut(s)	1701, 1923
MflI	RGATCY	2 cut(s)	409, 464
MhlI	GDGCHC	2 cut(s)	720, 1233
MlsI	TGGCCA	1 cut(s)	1654
MluCI	AATT	9 cut(s)	219, 266, 365, 1345, 1701, 1837, 1867, 1911, 1923
MluNI	TGGCCA	1 cut(s)	1654
MlyI	GAGTC	2 cut(s)	493, 1370
MmeI	TCCRAC	3 cut(s)	291, 437, 1776
Mox20I	TGGCCA	1 cut(s)	1654
MroXI	GAANNNNTTC	1 cut(s)	1243
MscI	TGGCCA	1 cut(s)	1654
MseI	TTAA	6 cut(s)	222, 663, 807, 858, 1580, 1914
MslI	CAYNNNNRTG	2 cut(s)	282, 736
Msp20I	TGGCCA	1 cut(s)	1654
MspA1I	CMGCKG	4 cut(s)	246, 626, 691, 1949
MspCI	CTTAAG	1 cut(s)	662
MspI	CCGG	1 cut(s)	2068
MspR9I	CCNGG	5 cut(s)	274, 351, 603, 1761, 1986
MunI	CAATTG	2 cut(s)	1701, 1923
Mva1269I	GAATGC	2 cut(s)	196, 1963
MvaI	CCWGG	5 cut(s)	274, 351, 603, 1761, 1986
MvnI	CGCG	2 cut(s)	123, 246
MwoI	GCNNNNNNNGC	5 cut(s)	249, 1130, 1191, 1660, 1682
NcoI	CCATGG	1 cut(s)	899
NdeI	CATATG	1 cut(s)	1723
NdeII	GATC	6 cut(s)	409, 464, 1156, 1774, 1883, 1907
NlaIV	GGNNCC	5 cut(s)	1417, 1750, 1995, 2054, 2066
NmeAIII	GCCGAG	1 cut(s)	1211
NmuCI	GTSAC	3 cut(s)	1212, 1362, 1601
NspI	RCATGY	3 cut(s)	803, 1284, 1494
PaeI	GCATGC	1 cut(s)	803
PciI	ACATGT	1 cut(s)	1490
PcsI	WCGNNNNNNNCGW	2 cut(s)	397, 902
PctI	GAATGC	2 cut(s)	196, 1963
PdmI	GAANNNNTTC	1 cut(s)	1243
PfeI	GAWTC	8 cut(s)	113, 584, 998, 1103, 1472, 1502, 1520, 1641
PkrI	GCNGC	9 cut(s)	161, 245, 248, 251, 628, 1123, 1255, 1588, 1785
PleI	GAGTC	2 cut(s)	493, 1369
PmaCI	CACGTG	1 cut(s)	392
PmlI	CACGTG	1 cut(s)	392
PpsI	GAGTC	2 cut(s)	493, 1369
Ppu21I	YACGTR	1 cut(s)	392
PscI	ACATGT	1 cut(s)	1490
PsiI	TTATAA	1 cut(s)	476
Psp124BI	GAGCTC	1 cut(s)	720
Psp6I	CCWGG	5 cut(s)	272, 349, 601, 1759, 1984
PspCI	CACGTG	1 cut(s)	392
PspFI	CCCAGC	1 cut(s)	80
PspGI	CCWGG	5 cut(s)	272, 349, 601, 1759, 1984
PspN4I	GGNNCC	5 cut(s)	1417, 1750, 1995, 2054, 2066
PspPI	GGNCC	5 cut(s)	118, 1078, 1749, 1859, 2065
PsrI	GAACNNNNNNTAC	2 cut(s)	1228, 1260
PstNI	CAGNNNCTG	2 cut(s)	629, 1745
PsuI	RGATCY	2 cut(s)	409, 464
PvuII	CAGCTG	2 cut(s)	626, 691
RsaI	GTAC	5 cut(s)	202, 333, 654, 993, 1279
RsaNI	GTAC	5 cut(s)	201, 332, 653, 992, 1278
RseI	CAYNNNNRTG	2 cut(s)	282, 736
Rsr2I	CGGWCCG	1 cut(s)	118
RsrII	CGGWCCG	1 cut(s)	118
SacI	GAGCTC	1 cut(s)	720
SacII	CCGCGG	1 cut(s)	247
SaqAI	TTAA	6 cut(s)	222, 663, 807, 858, 1580, 1914
SatI	GCNGC	9 cut(s)	160, 244, 247, 250, 627, 1122, 1254, 1587, 1784
Sau3AI	GATC	6 cut(s)	409, 464, 1156, 1774, 1883, 1907
Sau96I	GGNCC	5 cut(s)	118, 1078, 1749, 1859, 2065
ScaI	AGTACT	1 cut(s)	202
SchI	GAGTC	2 cut(s)	493, 1370
ScrFI	CCNGG	5 cut(s)	274, 351, 603, 1761, 1986
SduI	GDGCHC	2 cut(s)	720, 1233
SexAI	ACCWGGT	1 cut(s)	1984
SfaNI	GCATC	6 cut(s)	286, 1006, 1108, 1240, 1770, 1965
SfcI	CTRYAG	1 cut(s)	1234
Sfr303I	CCGCGG	1 cut(s)	247
SgrBI	CCGCGG	1 cut(s)	247
SinI	GGWCC	4 cut(s)	118, 1749, 1859, 2065
SmiMI	CAYNNNNRTG	2 cut(s)	282, 736
SmlI	CTYRAG	3 cut(s)	16, 662, 1621
SmoI	CTYRAG	3 cut(s)	16, 662, 1621
SpeI	ACTAGT	1 cut(s)	1340
SphI	GCATGC	1 cut(s)	803
Sse9I	AATT	9 cut(s)	219, 266, 365, 1345, 1701, 1837, 1867, 1911, 1923
SsiI	CCGC	8 cut(s)	8, 121, 194, 244, 246, 1253, 1514, 1949
SspI	AATATT	1 cut(s)	1315
SspMI	CTAG	6 cut(s)	101, 744, 1341, 1385, 1902, 2072
SstI	GAGCTC	1 cut(s)	720
StyD4I	CCNGG	5 cut(s)	272, 349, 601, 1759, 1984
StyI	CCWWGG	3 cut(s)	899, 1092, 1285
TaaI	ACNGT	5 cut(s)	43, 91, 336, 1235, 1263
TaiI	ACGT	1 cut(s)	394
TaqI	TCGA	4 cut(s)	133, 400, 939, 1591
TasI	AATT	9 cut(s)	219, 266, 365, 1345, 1701, 1837, 1867, 1911, 1923
TatI	WGTACW	3 cut(s)	200, 331, 652
TauI	GCSGC	3 cut(s)	246, 249, 1256
TfiI	GAWTC	8 cut(s)	113, 584, 998, 1103, 1472, 1502, 1520, 1641
Tru1I	TTAA	6 cut(s)	222, 663, 807, 858, 1580, 1914
Tru9I	TTAA	6 cut(s)	222, 663, 807, 858, 1580, 1914
TscAI	CASTG	3 cut(s)	714, 1238, 1466
TseFI	GTSAC	3 cut(s)	1212, 1362, 1601
TseI	GCWGC	6 cut(s)	159, 249, 626, 1121, 1586, 1783
Tsp45I	GTSAC	3 cut(s)	1212, 1362, 1601
TspDTI	ATGAA	8 cut(s)	228, 477, 952, 969, 1125, 1197, 1314, 1694
TspGWI	ACGGA	2 cut(s)	358, 2060
TspRI	CASTG	3 cut(s)	714, 1238, 1466
Vha464I	CTTAAG	1 cut(s)	662
VpaK11BI	GGWCC	4 cut(s)	118, 1749, 1859, 2065
XagI	CCTNNNNNAGG	1 cut(s)	747
XceI	RCATGY	3 cut(s)	803, 1284, 1494
XmiI	GTMKAC	3 cut(s)	696, 870, 1874
XmnI	GAANNNNTTC	1 cut(s)	1243
XspI	CTAG	6 cut(s)	101, 744, 1341, 1385, 1902, 2072
ZrmI	AGTACT	1 cut(s)	202

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.