Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0005888

Physical Location & Seq

Genomic Coordinates Forward (+)

53659055 .. 53664933

Gene Structure 5879 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00259250.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2028 bp

ATGGATTCGGTTGAATTGACTTATCACATGAAAGGATTTCTCAGAGCTGGAGTTACAGTCAAGGAGCTGGAGCCGTGTGAGGTCGGCCGGCTTGTAAGCCCGGAGCTGTGCAGCTCATCTCGAAGTTATAAAGATGTAACAATTGGTTCTTCAAAGTCTGAATCATCTAGGCTTGATGGTCAGCATCACAGCTATCAGGGTGAAGACTTGTCCAGGCACCTTCATGCCAGGGGCAGAAATGGGTTTTTGTTAAATCATGGCATTGAAAGTGTACAATTACAACGGAAATCAGTGAAGGTGTCAAAAACAGGTAGTATGCCTTTTAAGAGACCACGACTCAGTCAACTAGAAGATTCAGATAGCTTAACTGGAGTTGATGGGATAAAGGACATGCCAGATAAGCTCGGCTCGTATCTTGCAAAGTGCAATTCTGCAGATAAGACTCAATTGGCGAAACAAAAGACCAAATTTACAAGCAAGCGAGGTGATAAGAGAAATCACAAACTTCCTGTAAAGACTAAAAACGATTCCTTCTCTGTGAAGGCAGGTTTGGCAAGCTTCAGTTCGGCTGCTGGAGGGAACAATTTCTTTGGAGTACATGGCCTTAAGTCAGATAATCATGATGTTACAAAGCATGTAGATGATCTGCCACTGAATGAGCTTCTTGATGGCACATACAAACATCTCAGTTTGGGTAAGGACAAAGGAAAGAAACCAGTGAATGTTAACGATAGTTTTTTGCATTCAATTAGAAAGGCTTGTTCTATCCTTCAGCGCCCGAGGTCTGTTCAGCCCCAACATAATGCTGAAGTAGATAGCCATTCCGAAATGAAAATGTCATCTTTGCCGTTAGGCACAGCTGCTGTTGTAGCTAATGGTGTTAATGGTGATAAAGGAGAGTCATCCATAACAGATCTGTCTTCATCTAACAAGGTACATGATTCTTATAGCAGGCCTGGTAGTCCTGCTAAGCCCCTTGATATGCCATTAAGTCATCCTAATTATATTTTGGAATGCTTGGATCTTCCTCCTCACAAGGATTTGGAATCTTTGCTTCTGGATGCCATGAAGCCTGGTTTATTTTCAAAAAGTACTCCTGATCCATGCTCAGGCAGGCAAATGTCTCGGCAAGCAAGTTTGCCACTTTTCCCGTGGTCAAATACTTCTAGTTGGCATTGTAGAAGCAGTTCGGATACAGCAAAATTGTCTACAAATAGGGGCTCATGTCAAGGTCGATGGCTAAAAATAGAGAGGAATACTGTTACTTCATTGGGAATTGCCACTAGTAATTTTACTGACTTGGAGTCAATGACTTATGATCAGAGTCTAGTTCCTTCCGCAAGACTAAAAATGGCTTCTTCAACAGATAAAATTTCCCCAACCATATCTGTTCTACCTCAGTGTGAGTTGGATTCATCAGCTCCTGCAACATGTTTGAATGAATCATATGCTGCTTTAGACTCGGGAGGGAAGGTGAATTACTCAGGAAATAGTAATGATGAGCATTATTCAAATATATTGGATGCTGCTCAAACACTTTGTGGCATGGCAACAAATCCCTTCATTCGAAATCCAGATGGAATCCTACGATGGCCAAAGAAGCCTTTACAAAAGGCCATGAAAGCTCGCAAGTTGAAAGCAGTTGAGAAACCTGATGATGTATATGGATCATCAATTGCAGTATCTGGGTCTGACAATCTCACAAGAAGAAGCACGGACCGGATGCTGATGCTGCCCCCAAAGAAGCCCAAGCTCTCTTTGAGTGATGATAGAAAGGATTACAATAACTTCAGTAGCGTTAGGAAAGAACCAATAAGTTGGTCTACACCAAGATCAAGTAGGTCATTACCTAGCAAATCAGGTAAAGAATCAATTGGGAGTATTAGACATTCGACTTCGGATGTGGCGAAGCATTCATATATGATGCCCCCTCCTTCAAAGGTTCCAGAGAAGGCTTCCCATAAGCGAGACAAGTTGAGGAATTTATTGACAATGGAATGGAGCAGGGGAAGAGACCGGCCAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

675

Amino Acids

74.15

Weight (kDa)

9.46

Isoelectric Point (pI)

50.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005888)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64050 AT1G64050
fragaria_vesca	FvH4_5g03290 FvH4_5g03290 FvH4_5g03290
malus_domestica	MD06G1092500.v1.1 MD14G1113000.v1.1
prunus_persica	Prupe.5G107200_v2.0.a1 Prupe.5G107200_v2.0.a1 Prupe.5G107200_v2.0.a1 Prupe.5G107200_v2.0.a1 Prupe.5G107200_v2.0.a1 Prupe.5G107200_v2.0.a1 Prupe.5G107200_v2.0.a1 Prupe.5G107200_v2.0.a1
pyrus_communis	pycom06g08830 pycom14g10800
rosa_chinensis	RchiOBHm_Chr7g0196491
rosa_laevigata	RLG00000004009
rosa_multiflora	Rmu_sc0005497.1_g000004
rosa_roxburghii	Rroxscaffold_3G00259250
rosa_rugosa	Rorug07G0034000 Rorug07G0034100
rosa_samantha	Rh7AG158300 Rh7BG160200 Rh7CG166600 Rh7DG159400
rosa_wichuraiana	Rw7G013830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	129
Acc36I	ACCTGC	1 cut(s)	536
AccB1I	GGYRCC	1 cut(s)	216
AccI	GTMKAC	2 cut(s)	1208, 1823
AciI	CCGC	1 cut(s)	1338
AclWI	GGATC	3 cut(s)	1029, 1094, 1675
AcoI	YGGCCR	3 cut(s)	85, 1592, 2018
AcsI	RAATTY	3 cut(s)	467, 1371, 1981
AcuI	CTGAAG	4 cut(s)	544, 755, 828, 1774
AdeI	CACNNNGTG	1 cut(s)	1541
AfaI	GTAC	4 cut(s)	273, 597, 936, 1093
AfiI	CCNNNNNNNGG	1 cut(s)	1109
AflII	CTTAAG	1 cut(s)	605
AflIII	ACRYGT	1 cut(s)	1430
AhdI	GACNNNNNGTC	1 cut(s)	1303
AhlI	ACTAGT	1 cut(s)	1283
AjnI	CCWGG	4 cut(s)	212, 227, 955, 1072
AjuI	GAANNNNNNNTTGG	2 cut(s)	533, 565
Alw26I	GTCTC	4 cut(s)	322, 1128, 1962, 2007
AlwI	GGATC	3 cut(s)	1029, 1094, 1675
AlwNI	CAGNNNCTG	3 cut(s)	863, 1424, 1685
Ama87I	CYCGRG	2 cut(s)	778, 1462
AoxI	GGCC	6 cut(s)	85, 601, 953, 1592, 1614, 2018
ApeKI	GCWGC	6 cut(s)	111, 569, 860, 1451, 1526, 1732
ApoI	RAATTY	3 cut(s)	467, 1371, 1981
Asp700I	GAANNNNTTC	2 cut(s)	584, 1186
AspLEI	GCGC	1 cut(s)	777
AspS9I	GGNCC	1 cut(s)	1717
AsuC2I	CCSGG	1 cut(s)	101
AsuHPI	GGTGA	4 cut(s)	212, 497, 899, 1486
AsuII	TTCGAA	1 cut(s)	1567
AvaI	CYCGRG	2 cut(s)	778, 1462
AvaII	GGWCC	1 cut(s)	1717
BalI	TGGCCA	1 cut(s)	1594
BanI	GGYRCC	1 cut(s)	216
BanII	GRGCYC	1 cut(s)	1223
BarI	GAAGNNNNNNTAC	2 cut(s)	1463, 1495
BbsI	GAAGAC	2 cut(s)	210, 912
BbvI	GCAGC	6 cut(s)	123, 556, 847, 1438, 1513, 1719
BccI	CCATC	6 cut(s)	170, 371, 662, 1230, 1571, 1584
BceAI	ACGGC	2 cut(s)	58, 832
BcgI	CGANNNNNNTGC	2 cut(s)	1106, 1140
BciT130I	CCWGG	4 cut(s)	214, 229, 957, 1074
BciVI	GTATCC	1 cut(s)	1186
BclI	TGATCA	1 cut(s)	1318
BcnI	CCSGG	1 cut(s)	101
BcoDI	GTCTC	4 cut(s)	322, 1128, 1962, 2007
BcuI	ACTAGT	1 cut(s)	1283
BfaI	CTAG	6 cut(s)	168, 347, 1167, 1284, 1328, 1851
BfmI	CTRYAG	1 cut(s)	432
BfoI	RGCGCY	1 cut(s)	778
BfrI	CTTAAG	1 cut(s)	605
BfuAI	ACCTGC	1 cut(s)	536
BfuI	GTATCC	1 cut(s)	1186
BglII	AGATCT	1 cut(s)	913
BisI	GCNGC	6 cut(s)	112, 570, 861, 1452, 1527, 1733
BlpI	GCTNAGC	1 cut(s)	969
BlsI	GCNGC	6 cut(s)	113, 571, 862, 1453, 1528, 1734
BmcAI	AGTACT	1 cut(s)	1093
Bme1390I	CCNGG	5 cut(s)	101, 214, 229, 957, 1074
Bme18I	GGWCC	1 cut(s)	1717
BmeRI	GACNNNNNGTC	1 cut(s)	1303
BmeT110I	CYCGRG	2 cut(s)	778, 1462
BmgT120I	GGNCC	1 cut(s)	1717
BmiI	GGNNCC	3 cut(s)	72, 218, 1944
BmrFI	CCNGG	5 cut(s)	101, 214, 229, 957, 1074
BmsI	GCATC	6 cut(s)	193, 1051, 1513, 1713, 1719, 1914
BpiI	GAAGAC	2 cut(s)	210, 912
BpmI	CTGGAG	4 cut(s)	69, 89, 390, 594
Bpu10I	CCTNAGC	1 cut(s)	1108
Bpu1102I	GCTNAGC	1 cut(s)	969
Bpu14I	TTCGAA	1 cut(s)	1567
BpuMI	CCSGG	1 cut(s)	101
BsaI	GGTCTC	2 cut(s)	322, 2007
BsaJI	CCNNGG	3 cut(s)	228, 779, 1151
BsaWI	WCCGGW	1 cut(s)	1719
BsaXI	ACNNNNNCTCC	4 cut(s)	42, 72, 1458, 1488
Bsc4I	CCNNNNNNNGG	1 cut(s)	1109
Bse118I	RCCGGY	2 cut(s)	87, 2016
Bse1I	ACTGG	2 cut(s)	373, 716
BseBI	CCWGG	4 cut(s)	214, 229, 957, 1074
BseDI	CCNNGG	3 cut(s)	228, 779, 1151
BseGI	GGATG	6 cut(s)	902, 994, 1066, 1528, 1728, 1906
BseLI	CCNNNNNNNGG	1 cut(s)	1109
BseMII	CTCAG	6 cut(s)	55, 352, 700, 1122, 1412, 1497
BseNI	ACTGG	2 cut(s)	373, 716
BseRI	GAGGAG	1 cut(s)	1020
BseX3I	CGGCCG	1 cut(s)	85
BseXI	GCAGC	6 cut(s)	123, 556, 847, 1438, 1513, 1719
BsgI	GTGCAG	1 cut(s)	130
Bsh1285I	CGRYCG	1 cut(s)	88
BshFI	GGCC	6 cut(s)	87, 603, 955, 1594, 1616, 2020
BshNI	GGYRCC	1 cut(s)	216
BsiEI	CGRYCG	1 cut(s)	88
BsiHKCI	CYCGRG	2 cut(s)	778, 1462
BsiSI	CCGG	4 cut(s)	88, 101, 1720, 2017
BslI	CCNNNNNNNGG	1 cut(s)	1109
BsmAI	GTCTC	4 cut(s)	322, 1128, 1962, 2007
BsmI	GAATGC	3 cut(s)	742, 1019, 1912
BsnI	GGCC	6 cut(s)	87, 603, 955, 1594, 1616, 2020
Bso31I	GGTCTC	2 cut(s)	322, 2007
BsoBI	CYCGRG	2 cut(s)	778, 1462
Bsp119I	TTCGAA	1 cut(s)	1567
Bsp1286I	GDGCHC	1 cut(s)	1223
Bsp1407I	TGTACA	1 cut(s)	271
Bsp143I	GATC	7 cut(s)	643, 913, 1021, 1099, 1318, 1667, 1832
Bsp1720I	GCTNAGC	1 cut(s)	969
BspACI	CCGC	1 cut(s)	1338
BspANI	GGCC	6 cut(s)	87, 603, 955, 1594, 1616, 2020
BspCNI	CTCAG	6 cut(s)	54, 351, 699, 1121, 1411, 1496
BspHI	TCATGA	1 cut(s)	619
BspLI	GGNNCC	3 cut(s)	72, 218, 1944
BspMAI	CTGCAG	1 cut(s)	436
BspMI	ACCTGC	1 cut(s)	536
BspPI	GGATC	3 cut(s)	1029, 1094, 1675
BspT104I	TTCGAA	1 cut(s)	1567
BspT107I	GGYRCC	1 cut(s)	216
BspTI	CTTAAG	1 cut(s)	605
BspTNI	GGTCTC	2 cut(s)	322, 2007
BsrFI	RCCGGY	2 cut(s)	87, 2016
BsrGI	TGTACA	1 cut(s)	271
BsrI	ACTGG	2 cut(s)	373, 716
BssAI	RCCGGY	2 cut(s)	87, 2016
BssECI	CCNNGG	3 cut(s)	228, 779, 1151
BssMI	GATC	7 cut(s)	643, 913, 1021, 1099, 1318, 1667, 1832
Bst2UI	CCWGG	4 cut(s)	214, 229, 957, 1074
Bst4CI	ACNGT	2 cut(s)	58, 1261
Bst6I	CTCTTC	1 cut(s)	2005
BstAFI	CTTAAG	1 cut(s)	605
BstAUI	TGTACA	1 cut(s)	271
BstBI	TTCGAA	1 cut(s)	1567
BstC8I	GCNNGC	7 cut(s)	89, 479, 556, 953, 1115, 1131, 1627
BstDEI	CTNAG	7 cut(s)	41, 338, 686, 969, 1108, 1398, 1483
BstDSI	CCRYGG	1 cut(s)	1151
BstF5I	GGATG	6 cut(s)	902, 994, 1066, 1528, 1728, 1906
BstH2I	RGCGCY	1 cut(s)	778
BstHHI	GCGC	1 cut(s)	777
BstKTI	GATC	7 cut(s)	646, 916, 1024, 1102, 1321, 1670, 1835
BstMAI	GTCTC	4 cut(s)	322, 1128, 1962, 2007
BstMBI	GATC	7 cut(s)	643, 913, 1021, 1099, 1318, 1667, 1832
BstMCI	CGRYCG	1 cut(s)	88
BstMWI	GCNNNNNNNGC	6 cut(s)	400, 551, 869, 1600, 1622, 1732
BstNI	CCWGG	4 cut(s)	214, 229, 957, 1074
BstNSI	RCATGY	3 cut(s)	394, 638, 1434
BstSCI	CCNGG	5 cut(s)	99, 212, 227, 955, 1072
BstSFI	CTRYAG	1 cut(s)	432
BstV1I	GCAGC	6 cut(s)	123, 556, 847, 1438, 1513, 1719
BstV2I	GAAGAC	2 cut(s)	210, 912
BstX2I	RGATCY	2 cut(s)	913, 1021
BstXI	CCANNNNNNTGG	1 cut(s)	1818
BstYI	RGATCY	2 cut(s)	913, 1021
BstZI	CGGCCG	1 cut(s)	85
BsuI	GTATCC	1 cut(s)	1186
BsuRI	GGCC	6 cut(s)	87, 603, 955, 1594, 1616, 2020
BtgI	CCRYGG	1 cut(s)	1151
BtsCI	GGATG	6 cut(s)	902, 994, 1066, 1528, 1728, 1906
BtsIMutI	CAGTG	4 cut(s)	297, 650, 723, 1406
BveI	ACCTGC	1 cut(s)	536
Cac8I	GCNNGC	7 cut(s)	89, 479, 556, 953, 1115, 1131, 1627
CaiI	CAGNNNCTG	3 cut(s)	863, 1424, 1685
CciI	TCATGA	1 cut(s)	619
CfoI	GCGC	1 cut(s)	777
Cfr10I	RCCGGY	2 cut(s)	87, 2016
Cfr13I	GGNCC	1 cut(s)	1717
CpoI	CGGWCCG	1 cut(s)	1717
Csp6I	GTAC	4 cut(s)	272, 596, 935, 1092
CspI	CGGWCCG	1 cut(s)	1717
CviQI	GTAC	4 cut(s)	272, 596, 935, 1092
DdeI	CTNAG	7 cut(s)	41, 338, 686, 969, 1108, 1398, 1483
DpnI	GATC	7 cut(s)	645, 915, 1023, 1101, 1320, 1669, 1834
DpnII	GATC	7 cut(s)	643, 913, 1021, 1099, 1318, 1667, 1832
DraIII	CACNNNGTG	1 cut(s)	1541
DriI	GACNNNNNGTC	1 cut(s)	1303
EaeI	YGGCCR	3 cut(s)	85, 1592, 2018
EagI	CGGCCG	1 cut(s)	85
Eam1104I	CTCTTC	1 cut(s)	2005
Eam1105I	GACNNNNNGTC	1 cut(s)	1303
EarI	CTCTTC	1 cut(s)	2005
EclXI	CGGCCG	1 cut(s)	85
Eco147I	AGGCCT	1 cut(s)	955
Eco24I	GRGCYC	1 cut(s)	1223
Eco31I	GGTCTC	2 cut(s)	322, 2007
Eco47I	GGWCC	1 cut(s)	1717
Eco52I	CGGCCG	1 cut(s)	85
Eco57I	CTGAAG	4 cut(s)	544, 755, 828, 1774
Eco88I	CYCGRG	2 cut(s)	778, 1462
EcoRII	CCWGG	4 cut(s)	212, 227, 955, 1072
EcoT38I	GRGCYC	1 cut(s)	1223
FauNDI	CATATG	1 cut(s)	1447
FbaI	TGATCA	1 cut(s)	1318
FblI	GTMKAC	2 cut(s)	1208, 1823
Fnu4HI	GCNGC	6 cut(s)	112, 570, 861, 1452, 1527, 1733
FokI	GGATG	6 cut(s)	889, 981, 1073, 1535, 1735, 1913
FriOI	GRGCYC	1 cut(s)	1223
Fsp4HI	GCNGC	6 cut(s)	112, 570, 861, 1452, 1527, 1733
FspBI	CTAG	6 cut(s)	168, 347, 1167, 1284, 1328, 1851
GlaI	GCGC	1 cut(s)	776
GluI	GCNGC	6 cut(s)	112, 570, 861, 1452, 1527, 1733
GsuI	CTGGAG	4 cut(s)	69, 89, 390, 594
HaeII	RGCGCY	1 cut(s)	778
HaeIII	GGCC	6 cut(s)	87, 603, 955, 1594, 1616, 2020
HapII	CCGG	4 cut(s)	88, 101, 1720, 2017
HhaI	GCGC	1 cut(s)	777
Hin6I	GCGC	1 cut(s)	775
HinP1I	GCGC	1 cut(s)	775
HincII	GTYRAC	2 cut(s)	344, 727
HindII	GTYRAC	2 cut(s)	344, 727
HindIII	AAGCTT	1 cut(s)	556
HpaI	GTTAAC	1 cut(s)	727
HpaII	CCGG	4 cut(s)	88, 101, 1720, 2017
HphI	GGTGA	4 cut(s)	212, 497, 899, 1486
Hpy166II	GTNNAC	5 cut(s)	272, 344, 727, 1209, 1824
Hpy188I	TCNGA	9 cut(s)	44, 160, 358, 613, 826, 1192, 1323, 1693, 1900
Hpy188III	TCNNGA	9 cut(s)	120, 620, 665, 1058, 1097, 1464, 1485, 1574, 1946
Hpy8I	GTNNAC	5 cut(s)	272, 344, 727, 1209, 1824
HpyCH4III	ACNGT	2 cut(s)	58, 1261
HpyCH4V	TGCA	7 cut(s)	111, 419, 426, 434, 742, 1427, 1679
HpyF10VI	GCNNNNNNNGC	6 cut(s)	400, 551, 869, 1600, 1622, 1732
HpyF3I	CTNAG	7 cut(s)	41, 338, 686, 969, 1108, 1398, 1483
HspAI	GCGC	1 cut(s)	775
KroI	GCCGGC	1 cut(s)	87
KroNI	GCCGGC	1 cut(s)	89
Ksp22I	TGATCA	1 cut(s)	1318
KspAI	GTTAAC	1 cut(s)	727
Kzo9I	GATC	7 cut(s)	643, 913, 1021, 1099, 1318, 1667, 1832
LmnI	GCTCC	5 cut(s)	64, 70, 103, 1426, 2001
Lsp1109I	GCAGC	6 cut(s)	123, 556, 847, 1438, 1513, 1719
LweI	GCATC	6 cut(s)	193, 1051, 1513, 1713, 1719, 1914
MaeI	CTAG	6 cut(s)	168, 347, 1167, 1284, 1328, 1851
MaeIII	GTNAC	4 cut(s)	52, 136, 625, 1261
MalI	GATC	7 cut(s)	645, 915, 1023, 1101, 1320, 1669, 1834
MboI	GATC	7 cut(s)	643, 913, 1021, 1099, 1318, 1667, 1832
MboII	GAAGA	8 cut(s)	141, 215, 362, 912, 1016, 1350, 1719, 2022
MfeI	CAATTG	4 cut(s)	141, 446, 1674, 1872
MflI	RGATCY	2 cut(s)	913, 1021
MhlI	GDGCHC	1 cut(s)	1223
MlsI	TGGCCA	1 cut(s)	1594
MluNI	TGGCCA	1 cut(s)	1594
MlyI	GAGTC	6 cut(s)	330, 436, 908, 1313, 1333, 1454
MmeI	TCCRAC	1 cut(s)	1389
Mox20I	TGGCCA	1 cut(s)	1594
MroNI	GCCGGC	1 cut(s)	87
MroXI	GAANNNNTTC	2 cut(s)	584, 1186
MscI	TGGCCA	1 cut(s)	1594
MseI	TTAA	7 cut(s)	251, 324, 365, 606, 726, 882, 989
MslI	CAYNNNNRTG	2 cut(s)	222, 639
Msp20I	TGGCCA	1 cut(s)	1594
MspA1I	CMGCKG	1 cut(s)	860
MspCI	CTTAAG	1 cut(s)	605
MspI	CCGG	4 cut(s)	88, 101, 1720, 2017
MspR9I	CCNGG	5 cut(s)	101, 214, 229, 957, 1074
MunI	CAATTG	4 cut(s)	141, 446, 1674, 1872
Mva1269I	GAATGC	3 cut(s)	742, 1019, 1912
MvaI	CCWGG	4 cut(s)	214, 229, 957, 1074
MwoI	GCNNNNNNNGC	6 cut(s)	400, 551, 869, 1600, 1622, 1732
NaeI	GCCGGC	1 cut(s)	89
NciI	CCSGG	1 cut(s)	101
NdeI	CATATG	1 cut(s)	1447
NdeII	GATC	7 cut(s)	643, 913, 1021, 1099, 1318, 1667, 1832
NgoMIV	GCCGGC	1 cut(s)	87
NlaIV	GGNNCC	3 cut(s)	72, 218, 1944
NmeAIII	GCCGAG	2 cut(s)	384, 1105
NspI	RCATGY	3 cut(s)	394, 638, 1434
NspV	TTCGAA	1 cut(s)	1567
PagI	TCATGA	1 cut(s)	619
PceI	AGGCCT	1 cut(s)	955
PciI	ACATGT	1 cut(s)	1430
PcsI	WCGNNNNNNNCGW	1 cut(s)	1904
PctI	GAATGC	3 cut(s)	742, 1019, 1912
PdiI	GCCGGC	1 cut(s)	89
PdmI	GAANNNNTTC	2 cut(s)	584, 1186
PflFI	GACNNNGTC	1 cut(s)	339
PkrI	GCNGC	6 cut(s)	113, 571, 862, 1453, 1528, 1734
PleI	GAGTC	6 cut(s)	330, 436, 907, 1312, 1332, 1454
PpsI	GAGTC	6 cut(s)	330, 436, 907, 1312, 1332, 1454
PscI	ACATGT	1 cut(s)	1430
PsiI	TTATAA	1 cut(s)	129
Psp6I	CCWGG	4 cut(s)	212, 227, 955, 1072
PspGI	CCWGG	4 cut(s)	212, 227, 955, 1072
PspN4I	GGNNCC	3 cut(s)	72, 218, 1944
PspPI	GGNCC	1 cut(s)	1717
PsrI	GAACNNNNNNTAC	2 cut(s)	1171, 1203
PstI	CTGCAG	1 cut(s)	436
PstNI	CAGNNNCTG	3 cut(s)	863, 1424, 1685
PsuI	RGATCY	2 cut(s)	913, 1021
PsyI	GACNNNGTC	1 cut(s)	339
PvuII	CAGCTG	1 cut(s)	860
RsaI	GTAC	4 cut(s)	273, 597, 936, 1093
RsaNI	GTAC	4 cut(s)	272, 596, 935, 1092
RseI	CAYNNNNRTG	2 cut(s)	222, 639
Rsr2I	CGGWCCG	1 cut(s)	1717
RsrII	CGGWCCG	1 cut(s)	1717
SaqAI	TTAA	7 cut(s)	251, 324, 365, 606, 726, 882, 989
SatI	GCNGC	6 cut(s)	112, 570, 861, 1452, 1527, 1733
Sau3AI	GATC	7 cut(s)	643, 913, 1021, 1099, 1318, 1667, 1832
Sau96I	GGNCC	1 cut(s)	1717
ScaI	AGTACT	1 cut(s)	1093
SchI	GAGTC	6 cut(s)	330, 436, 908, 1313, 1333, 1454
ScrFI	CCNGG	5 cut(s)	101, 214, 229, 957, 1074
SduI	GDGCHC	1 cut(s)	1223
SfaNI	GCATC	6 cut(s)	193, 1051, 1513, 1713, 1719, 1914
SfcI	CTRYAG	1 cut(s)	432
SfuI	TTCGAA	1 cut(s)	1567
SinI	GGWCC	1 cut(s)	1717
SmiMI	CAYNNNNRTG	2 cut(s)	222, 639
SmlI	CTYRAG	1 cut(s)	605
SmoI	CTYRAG	1 cut(s)	605
SpeI	ACTAGT	1 cut(s)	1283
SseBI	AGGCCT	1 cut(s)	955
SsiI	CCGC	1 cut(s)	1338
SspMI	CTAG	6 cut(s)	168, 347, 1167, 1284, 1328, 1851
StuI	AGGCCT	1 cut(s)	955
StyD4I	CCNGG	5 cut(s)	99, 212, 227, 955, 1072
TaaI	ACNGT	2 cut(s)	58, 1261
TaqI	TCGA	4 cut(s)	121, 1234, 1567, 1892
TatI	WGTACW	3 cut(s)	271, 595, 1091
Tru1I	TTAA	7 cut(s)	251, 324, 365, 606, 726, 882, 989
Tru9I	TTAA	7 cut(s)	251, 324, 365, 606, 726, 882, 989
TscAI	CASTG	4 cut(s)	297, 657, 723, 1406
TseI	GCWGC	6 cut(s)	111, 569, 860, 1451, 1526, 1732
TspGWI	ACGGA	2 cut(s)	298, 1730
TspRI	CASTG	4 cut(s)	297, 657, 723, 1406
Tth111I	GACNNNGTC	1 cut(s)	339
Vha464I	CTTAAG	1 cut(s)	605
VpaK11BI	GGWCC	1 cut(s)	1717
XapI	RAATTY	3 cut(s)	467, 1371, 1981
XceI	RCATGY	3 cut(s)	394, 638, 1434
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1149
XmiI	GTMKAC	2 cut(s)	1208, 1823
XmnI	GAANNNNTTC	2 cut(s)	584, 1186
XspI	CTAG	6 cut(s)	168, 347, 1167, 1284, 1328, 1851
ZrmI	AGTACT	1 cut(s)	1093

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.