pycom06g14800

Pentatricopeptide repeat-containing protein At3g48250

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
OG0015170
Physical Location & Seq
Forward (+)
19456049 .. 19458010
1962 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g14800.1

Sequence Viewer

Length: 1962 bp
ATGAATCGAGCAATGGCGGCGTTTCTCACTGCCCGCCGATTCGCCAACTCGCTCGCGGCGGCTCAGTTCGACGTCATAACTAGGCCGCTTTATTCTCAGGTGACTCATTCCTCTCACCTCTCTCGCTTCCTTTCAAATCAATCCCACTGTCATTCCCATTTCCTCAACACCCATCAAAAGCTCTTCTTTTCCTCGACCCCCAACTCGGTCCTGCTACTCGTTCTGGCCAACAAGTGGTCTGCAGAGTTGGAGACCGAGTTGTCCGAGTCGCACCCATCACTCACCCACGATGTAGTAATCTATGTTTTGAAGAAATTGGATAAAGACCCACGAAGGGCTTGGGATTTTTTCAATTGGGCGTGCGAGAAGAAAGGATTTAGGCCGAGTTCTTCGGTGTTTAGCTTAATTCTTAGGGTTTTAGTGCATAAGAGCTCGATGATGGAGTTTTGGATTGCTTTGAGGAAGATGAAAGAGCAGGGGTTTTTCATTGATGAGCAAACTTATGTGGCAATTAGAGAACAGTTGAAAACGGGGAGGATGGATAGTGATGTCGTGGCTTTCAAGCATTTTTACGAGAGAATGATCGAAGATAATGCGGCGGATGATGTTGTGAAGAGCGTGGTGGATGTTGTTTCGGGGTCGGATTGGAGTGATGGGGTTGAAAAAGAATTGGGGGAGCTCAAAATTGAGTTATCTGATAATTTTGTCGTTAGGGTTTTGAAGGATCTTAGGAATTACCCGGTGAAAGCGTTGAGGTTTTTCCGTTGGGCTGGTCAGTGTTCTGGTTATGAAAACAATACAATTACATACAATGCAGTTGCGAGGGTTCTTGCAAGGCCTGATTCGATAGGGGAGTTTTGGAGTGTGATTGAGGGGATGAAGGGTGCAGGTCATGAGCTGGATTTGGACACCTATATAAAGATTACGCGGCAGTTTCAGAAGAGCAGGATGATAGAGGACGCGGTGAAGCTGTATGAGTTCATGATGGACGGCCCTTATAAGCCCTCTGCTCAGGATTGCAGCTTGCTTTTAAGGAGCATCTCAGGGAGTGATAAACCGGATCTGGATATGGTGTTTAGAGTTGCAAAGAAGTTCGAGTCTGCAGGGAATACCCTCTCCAAGGTTGTTTACGATGGGATTCACAGGTCTTTGACAGGCGCAGGCAGATTTGATCAAGCGGAGGAAGTTATGCAGGCTATGAGAAATGCAGGGTACGAGCCGGACAACATTACATACAGCCAATTGGTCTTTGGACTTTGTAAGGCCAAGAGACTTGAAGAAGCCTGCAATGTGTTGGACGAAATGGAAGCAGACGGATGCGTTCCTGATATCAAGACTTGGACCATTTTGATTCAAGGGCATTGCGCCGCTGATGAAGTTGACACGGCGCTGATTTGTTTCGCAAAGATGATGGAAAAAGGCTGTGGTGCGGATGCTGATCTGATGGACGTCTTGATAGAGGGGTTCCTTAAGCAGAGGAAGATAGATGGTGCATATAAACTGCTTGACGAAATGGTGAAAAAAGCTCGTTTAGTACCGTGGCAAGCCACATACAAAAATCTAATCGAAAAATTGTTGGAGGTCAGAAAACTCGAAGAAGCATTCAAACTTCTTCATTTGATGAAGAAACAGAACTACCCACCTTATTCAGAACCGTTTGTCCAGTATATATCAAAGTTTGGTTCTGTGGAGGATGCTGCAGACTTTTTCAAAGCATTGACTGTTAAGGAACATCCGTCATCTGCAGCGTATGTCCATGTTTTGAAAGCATTCTTTAAGGAAGGTAGATACTCCGAGGCGAAAGATCTGCTTCATAAATGCCCTCATCATATTCGAAAGCACGGTGAAATTTGCAAACTTTTTGGTTCTACGGCAGGCAAGCTGAAGCAGATTACTACAGAAGATGAAGGCAAGCGGAAGCAGACTACTACTGAAGACAAGCAGAAGCGGACTACTACTTGA

Protein Analysis

654

Amino Acids

74.49

Weight (kDa)

7.87

Isoelectric Point (pI)

32.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_long PF17177 318 - 451 1e-08 Pentacotripeptide-repeat region of PRORP
TPR_24 PF23276 353 - 469 1.7e-07 Fungal tetratrico peptide repeats
PPR_2 PF13041 385 - 421 1.1e-06 PPR repeat family
PPR_1 PF12854 404 - 436 6e-11 PPR repeat
PPR_2 PF13041 418 - 455 1.2e-10 PPR repeat family
PPR_2 PF13041 442 - 478 2.5e-06 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015170)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48250
fragaria_vesca FvH4_5g06330
malus_domestica MD14G1171100.v1.1
prunus_persica Prupe.5G165200_v2.0.a1
pyrus_communis pycom06g14800 pycom14g14300
rosa_chinensis RchiOBHm_Chr7g0192531
rosa_laevigata RLG00000004358
rosa_multiflora Rmu_sc0003108.1_g000034
rosa_roxburghii Rroxscaffold_3G00262960
rosa_rugosa Rorug07G0001900
rosa_samantha Rh7AG126100 Rh7BG128500 Rh7CG130000 Rh7DG129900
rosa_wichuraiana Rw7G010860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 999
AasI GACNNNNNNGTC 1 cut(s) 259
AatII GACGTC 2 cut(s) 75, 1452
Acc36I ACCTGC 1 cut(s) 878
AccB7I CCANNNNNTGG 1 cut(s) 234
AccII CGCG 3 cut(s) 56, 928, 962
AclWI GGATC 2 cut(s) 732, 1068
AcoI YGGCCR 1 cut(s) 225
AcsI RAATTY 1 cut(s) 1848
AcuI CTGAAG 2 cut(s) 1904, 1953
AcyI GRCGYC 2 cut(s) 72, 1449
AfaI GTAC 2 cut(s) 1214, 1536
AfiI CCNNNNNNNGG 4 cut(s) 205, 234, 334, 1120
AflII CTTAAG 1 cut(s) 1469
AloI GAACNNNNNNTCC 2 cut(s) 1644, 1676
AluBI AGCT 9 cut(s) 181, 402, 432, 679, 898, 970, 1023, 1526, 1882
AluI AGCT 9 cut(s) 181, 402, 432, 679, 898, 970, 1023, 1526, 1882
Alw21I GWGCWC 2 cut(s) 434, 681
Alw26I GTCTC 2 cut(s) 245, 1264
AlwI GGATC 2 cut(s) 732, 1068
AoxI GGCC 6 cut(s) 83, 225, 380, 836, 991, 1263
ApeKI GCWGC 3 cut(s) 1020, 1697, 1745
ApoI RAATTY 1 cut(s) 1848
Asp700I GAANNNNTTC 1 cut(s) 1769
AspLEI GCGC 3 cut(s) 1160, 1367, 1390
AspS9I GGNCC 3 cut(s) 208, 992, 1341
AsuC2I CCSGG 1 cut(s) 740
AsuHPI GGTGA 7 cut(s) 107, 112, 274, 754, 976, 1528, 1856
AsuII TTCGAA 1 cut(s) 1834
AvaII GGWCC 2 cut(s) 208, 1341
BalI TGGCCA 1 cut(s) 227
BanII GRGCYC 2 cut(s) 434, 681
BbsI GAAGAC 1 cut(s) 1941
Bbv12I GWGCWC 2 cut(s) 434, 681
BbvI GCAGC 3 cut(s) 1032, 1684, 1757
BceAI ACGGC 3 cut(s) 1006, 1401, 1887
BcgI CGANNNNNNTGC 4 cut(s) 575, 609, 1789, 1823
BclI TGATCA 1 cut(s) 1171
BcnI CCSGG 1 cut(s) 740
BcoDI GTCTC 2 cut(s) 245, 1264
BfaI CTAG 1 cut(s) 81
BfmI CTRYAG 5 cut(s) 240, 1101, 1698, 1743, 1896
BfoI RGCGCY 1 cut(s) 1391
BfrI CTTAAG 1 cut(s) 1469
BfuAI ACCTGC 1 cut(s) 878
BglII AGATCT 1 cut(s) 1804
Bme1390I CCNGG 1 cut(s) 740
Bme18I GGWCC 2 cut(s) 208, 1341
BmgT120I GGNCC 3 cut(s) 208, 992, 1341
BmiI GGNNCC 1 cut(s) 1466
BmrFI CCNGG 1 cut(s) 740
BmsI GCATC 4 cut(s) 1047, 1307, 1423, 1684
BpiI GAAGAC 1 cut(s) 1941
Bpu10I CCTNAGC 1 cut(s) 1011
Bpu14I TTCGAA 1 cut(s) 1834
BpuMI CCSGG 1 cut(s) 740
BsaBI GATNNNNATC 1 cut(s) 1437
BsaHI GRCGYC 2 cut(s) 72, 1449
BsaI GGTCTC 1 cut(s) 245
BsaJI CCNNGG 3 cut(s) 1119, 1538, 1794
BsaWI WCCGGW 1 cut(s) 1057
BsaXI ACNNNNNCTCC 2 cut(s) 242, 272
Bsc4I CCNNNNNNNGG 4 cut(s) 205, 234, 334, 1120
Bse1I ACTGG 1 cut(s) 1663
Bse3DI GCAATG 3 cut(s) 18, 1294, 1360
Bse8I GATNNNNATC 1 cut(s) 1437
BseDI CCNNGG 3 cut(s) 1119, 1538, 1794
BseGI GGATG 9 cut(s) 543, 607, 631, 882, 954, 1322, 1438, 1699, 1732
BseJI GATNNNNATC 1 cut(s) 1437
BseLI CCNNNNNNNGG 4 cut(s) 205, 234, 334, 1120
BseMI GCAATG 3 cut(s) 18, 1294, 1360
BseMII CTCAG 4 cut(s) 77, 110, 1025, 1056
BseNI ACTGG 1 cut(s) 1663
BseXI GCAGC 3 cut(s) 1032, 1684, 1757
BsgI GTGCAG 1 cut(s) 906
Bsh1236I CGCG 3 cut(s) 56, 928, 962
BshFI GGCC 6 cut(s) 85, 227, 382, 838, 993, 1265
BsiHKAI GWGCWC 2 cut(s) 434, 681
BsiSI CCGG 3 cut(s) 740, 1058, 1220
BslI CCNNNNNNNGG 4 cut(s) 205, 234, 334, 1120
BsmAI GTCTC 2 cut(s) 245, 1264
BsmI GAATGC 2 cut(s) 1601, 1769
BsnI GGCC 6 cut(s) 85, 227, 382, 838, 993, 1265
Bso31I GGTCTC 1 cut(s) 245
Bsp119I TTCGAA 1 cut(s) 1834
Bsp1286I GDGCHC 2 cut(s) 434, 681
Bsp143I GATC 6 cut(s) 582, 724, 1060, 1171, 1438, 1804
BspANI GGCC 6 cut(s) 85, 227, 382, 838, 993, 1265
BspCNI CTCAG 4 cut(s) 76, 109, 1024, 1055
BspFNI CGCG 3 cut(s) 56, 928, 962
BspHI TCATGA 2 cut(s) 892, 981
BspLI GGNNCC 1 cut(s) 1466
BspMAI CTGCAG 4 cut(s) 244, 1105, 1702, 1747
BspMI ACCTGC 1 cut(s) 878
BspPI GGATC 2 cut(s) 732, 1068
BspQI GCTCTTC 3 cut(s) 188, 608, 935
BspT104I TTCGAA 1 cut(s) 1834
BspTI CTTAAG 1 cut(s) 1469
BspTNI GGTCTC 1 cut(s) 245
BsrDI GCAATG 3 cut(s) 18, 1294, 1360
BsrI ACTGG 1 cut(s) 1663
BssECI CCNNGG 3 cut(s) 1119, 1538, 1794
BssMI GATC 6 cut(s) 582, 724, 1060, 1171, 1438, 1804
BssNI GRCGYC 2 cut(s) 72, 1449
BssT1I CCWWGG 1 cut(s) 1119
Bst4CI ACNGT 6 cut(s) 149, 522, 1539, 1656, 1723, 1844
Bst6I CTCTTC 3 cut(s) 188, 608, 935
BstACI GRCGYC 2 cut(s) 72, 1449
BstAFI CTTAAG 1 cut(s) 1469
BstBI TTCGAA 1 cut(s) 1834
BstDEI CTNAG 6 cut(s) 63, 96, 410, 728, 1011, 1042
BstDSI CCRYGG 1 cut(s) 1538
BstENI CCTNNNNNAGG 1 cut(s) 1118
BstF5I GGATG 9 cut(s) 543, 607, 631, 882, 954, 1322, 1438, 1699, 1732
BstFNI CGCG 3 cut(s) 56, 928, 962
BstH2I RGCGCY 1 cut(s) 1391
BstHHI GCGC 3 cut(s) 1160, 1367, 1390
BstKTI GATC 6 cut(s) 585, 727, 1063, 1174, 1441, 1807
BstMAI GTCTC 2 cut(s) 245, 1264
BstMBI GATC 6 cut(s) 582, 724, 1060, 1171, 1438, 1804
BstMWI GCNNNNNNNGC 1 cut(s) 17
BstSCI CCNGG 1 cut(s) 738
BstSFI CTRYAG 5 cut(s) 240, 1101, 1698, 1743, 1896
BstUI CGCG 3 cut(s) 56, 928, 962
BstV1I GCAGC 3 cut(s) 1032, 1684, 1757
BstV2I GAAGAC 1 cut(s) 1941
BstX2I RGATCY 3 cut(s) 724, 1060, 1804
BstYI RGATCY 3 cut(s) 724, 1060, 1804
BsuRI GGCC 6 cut(s) 85, 227, 382, 838, 993, 1265
BtgI CCRYGG 1 cut(s) 1538
BtsCI GGATG 9 cut(s) 543, 607, 631, 882, 954, 1322, 1438, 1699, 1732
BtsI GCAGTG 1 cut(s) 27
BtsIMutI CAGTG 3 cut(s) 27, 145, 782
BveI ACCTGC 1 cut(s) 878
CciI TCATGA 2 cut(s) 892, 981
CfoI GCGC 3 cut(s) 1160, 1367, 1390
Cfr13I GGNCC 3 cut(s) 208, 992, 1341
CseI GACGC 1 cut(s) 968
Csp6I GTAC 2 cut(s) 1213, 1535
CviAII CATG 3 cut(s) 893, 982, 1757
CviQI GTAC 2 cut(s) 1213, 1535
DdeI CTNAG 6 cut(s) 63, 96, 410, 728, 1011, 1042
DpnI GATC 6 cut(s) 584, 726, 1062, 1173, 1440, 1806
DpnII GATC 6 cut(s) 582, 724, 1060, 1171, 1438, 1804
DrdI GACNNNNNNGTC 1 cut(s) 259
DseDI GACNNNNNNGTC 1 cut(s) 259
EaeI YGGCCR 1 cut(s) 225
Eam1104I CTCTTC 3 cut(s) 188, 608, 935
EarI CTCTTC 3 cut(s) 188, 608, 935
EciI GGCGGA 1 cut(s) 614
Ecl136II GAGCTC 2 cut(s) 432, 679
Eco130I CCWWGG 1 cut(s) 1119
Eco147I AGGCCT 1 cut(s) 838
Eco24I GRGCYC 2 cut(s) 434, 681
Eco31I GGTCTC 1 cut(s) 245
Eco32I GATATC 1 cut(s) 1330
Eco47I GGWCC 2 cut(s) 208, 1341
Eco53kI GAGCTC 2 cut(s) 432, 679
Eco57I CTGAAG 2 cut(s) 1904, 1953
EcoICRI GAGCTC 2 cut(s) 432, 679
EcoNI CCTNNNNNAGG 1 cut(s) 1118
EcoRV GATATC 1 cut(s) 1330
EcoT14I CCWWGG 1 cut(s) 1119
EcoT38I GRGCYC 2 cut(s) 434, 681
ErhI CCWWGG 1 cut(s) 1119
FaeI CATG 3 cut(s) 896, 985, 1760
FalI AAGNNNNNCTT 4 cut(s) 170, 202, 1794, 1826
FatI CATG 3 cut(s) 892, 981, 1756
FauI CCCGC 1 cut(s) 41
FbaI TGATCA 1 cut(s) 1171
FokI GGATG 9 cut(s) 550, 614, 638, 889, 961, 1329, 1445, 1706, 1719
FriOI GRGCYC 2 cut(s) 434, 681
FspBI CTAG 1 cut(s) 81
GlaI GCGC 3 cut(s) 1159, 1366, 1389
HaeII RGCGCY 1 cut(s) 1391
HaeIII GGCC 6 cut(s) 85, 227, 382, 838, 993, 1265
HapII CCGG 3 cut(s) 740, 1058, 1220
HgaI GACGC 1 cut(s) 968
HhaI GCGC 3 cut(s) 1160, 1367, 1390
Hin1I GRCGYC 2 cut(s) 72, 1449
Hin1II CATG 3 cut(s) 896, 985, 1760
Hin6I GCGC 3 cut(s) 1158, 1365, 1388
HinP1I GCGC 3 cut(s) 1158, 1365, 1388
HincII GTYRAC 1 cut(s) 1381
HindII GTYRAC 1 cut(s) 1381
HinfI GANTC 8 cut(s) 4, 39, 103, 266, 842, 1097, 1138, 1351
HpaII CCGG 3 cut(s) 740, 1058, 1220
HphI GGTGA 7 cut(s) 107, 112, 274, 754, 976, 1528, 1856
Hpy166II GTNNAC 2 cut(s) 1129, 1381
Hpy188I TCNGA 8 cut(s) 265, 643, 697, 939, 1443, 1586, 1651, 1795
Hpy188III TCNNGA 7 cut(s) 893, 982, 1013, 1064, 1325, 1333, 1453
Hpy8I GTNNAC 2 cut(s) 1129, 1381
Hpy99I CGWCG 1 cut(s) 74
HpyAV CCTTC 5 cut(s) 327, 715, 874, 1775, 1901
HpyCH4III ACNGT 6 cut(s) 149, 522, 1539, 1656, 1723, 1844
HpyCH4IV ACGT 2 cut(s) 72, 1449
HpyF10VI GCNNNNNNNGC 1 cut(s) 17
HpyF3I CTNAG 6 cut(s) 63, 96, 410, 728, 1011, 1042
HpySE526I ACGT 2 cut(s) 72, 1449
Hsp92I GRCGYC 2 cut(s) 72, 1449
Hsp92II CATG 3 cut(s) 896, 985, 1760
HspAI GCGC 3 cut(s) 1158, 1365, 1388
Ksp22I TGATCA 1 cut(s) 1171
Kzo9I GATC 6 cut(s) 582, 724, 1060, 1171, 1438, 1804
LguI GCTCTTC 3 cut(s) 188, 608, 935
LmnI GCTCC 2 cut(s) 676, 1035
Lsp1109I GCAGC 3 cut(s) 1032, 1684, 1757
LweI GCATC 4 cut(s) 1047, 1307, 1423, 1684
MaeI CTAG 1 cut(s) 81
MaeII ACGT 2 cut(s) 72, 1449
MaeIII GTNAC 1 cut(s) 100
MalI GATC 6 cut(s) 584, 726, 1062, 1173, 1440, 1806
MboI GATC 6 cut(s) 582, 724, 1060, 1171, 1438, 1804
MfeI CAATTG 2 cut(s) 352, 1241
MflI RGATCY 3 cut(s) 724, 1060, 1804
MhlI GDGCHC 2 cut(s) 434, 681
MlsI TGGCCA 1 cut(s) 227
MluNI TGGCCA 1 cut(s) 227
MlyI GAGTC 3 cut(s) 97, 275, 1106
MmeI TCCRAC 4 cut(s) 228, 621, 1275, 1557
Mox20I TGGCCA 1 cut(s) 227
MroXI GAANNNNTTC 1 cut(s) 1769
MscI TGGCCA 1 cut(s) 227
MseI TTAA 5 cut(s) 404, 1031, 1470, 1725, 1776
Msp20I TGGCCA 1 cut(s) 227
MspA1I CMGCKG 1 cut(s) 1370
MspCI CTTAAG 1 cut(s) 1469
MspI CCGG 3 cut(s) 740, 1058, 1220
MspR9I CCNGG 1 cut(s) 740
MunI CAATTG 2 cut(s) 352, 1241
Mva1269I GAATGC 2 cut(s) 1601, 1769
MvnI CGCG 3 cut(s) 56, 928, 962
MwoI GCNNNNNNNGC 1 cut(s) 17
NciI CCSGG 1 cut(s) 740
NdeII GATC 6 cut(s) 582, 724, 1060, 1171, 1438, 1804
NlaIII CATG 3 cut(s) 896, 985, 1760
NlaIV GGNNCC 1 cut(s) 1466
NmeAIII GCCGAG 1 cut(s) 408
NmuCI GTSAC 1 cut(s) 100
NspV TTCGAA 1 cut(s) 1834
PagI TCATGA 2 cut(s) 892, 981
PceI AGGCCT 1 cut(s) 838
PciSI GCTCTTC 3 cut(s) 188, 608, 935
PctI GAATGC 2 cut(s) 1601, 1769
PdmI GAANNNNTTC 1 cut(s) 1769
PfeI GAWTC 5 cut(s) 4, 39, 842, 1138, 1351
PflMI CCANNNNNTGG 1 cut(s) 234
PleI GAGTC 3 cut(s) 97, 274, 1105
PpsI GAGTC 3 cut(s) 97, 274, 1105
PsiI TTATAA 1 cut(s) 999
Psp124BI GAGCTC 2 cut(s) 434, 681
PspN4I GGNNCC 1 cut(s) 1466
PspPI GGNCC 3 cut(s) 208, 992, 1341
PstI CTGCAG 4 cut(s) 244, 1105, 1702, 1747
PsuI RGATCY 3 cut(s) 724, 1060, 1804
RsaI GTAC 2 cut(s) 1214, 1536
RsaNI GTAC 2 cut(s) 1213, 1535
SacI GAGCTC 2 cut(s) 434, 681
SapI GCTCTTC 3 cut(s) 188, 608, 935
SaqAI TTAA 5 cut(s) 404, 1031, 1470, 1725, 1776
Sau3AI GATC 6 cut(s) 582, 724, 1060, 1171, 1438, 1804
Sau96I GGNCC 3 cut(s) 208, 992, 1341
SchI GAGTC 3 cut(s) 97, 275, 1106
ScrFI CCNGG 1 cut(s) 740
SduI GDGCHC 2 cut(s) 434, 681
SfaNI GCATC 4 cut(s) 1047, 1307, 1423, 1684
SfcI CTRYAG 5 cut(s) 240, 1101, 1698, 1743, 1896
SfuI TTCGAA 1 cut(s) 1834
SinI GGWCC 2 cut(s) 208, 1341
SmlI CTYRAG 1 cut(s) 1469
SmoI CTYRAG 1 cut(s) 1469
SseBI AGGCCT 1 cut(s) 838
SspMI CTAG 1 cut(s) 81
SstI GAGCTC 2 cut(s) 434, 681
StuI AGGCCT 1 cut(s) 838
StyD4I CCNGG 1 cut(s) 738
StyI CCWWGG 1 cut(s) 1119
TaaI ACNGT 6 cut(s) 149, 522, 1539, 1656, 1723, 1844
TaiI ACGT 2 cut(s) 75, 1452
TaqII GACCGA 2 cut(s) 196, 269
TauI GCSGC 7 cut(s) 20, 59, 62, 88, 599, 931, 1370
TfiI GAWTC 5 cut(s) 4, 39, 842, 1138, 1351
Tru1I TTAA 5 cut(s) 404, 1031, 1470, 1725, 1776
Tru9I TTAA 5 cut(s) 404, 1031, 1470, 1725, 1776
TscAI CASTG 3 cut(s) 34, 152, 782
TseFI GTSAC 1 cut(s) 100
TseI GCWGC 3 cut(s) 1020, 1697, 1745
Tsp45I GTSAC 1 cut(s) 100
TspGWI ACGGA 3 cut(s) 752, 1329, 1725
TspRI CASTG 3 cut(s) 34, 152, 782
Van91I CCANNNNNTGG 1 cut(s) 234
Vha464I CTTAAG 1 cut(s) 1469
VpaK11BI GGWCC 2 cut(s) 208, 1341
XagI CCTNNNNNAGG 1 cut(s) 1118
XapI RAATTY 1 cut(s) 1848
XcmI CCANNNNNNNNNTGG 2 cut(s) 336, 1247
XmnI GAANNNNTTC 1 cut(s) 1769
XspI CTAG 1 cut(s) 81
ZraI GACGTC 2 cut(s) 73, 1450
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.