Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0004416

Physical Location & Seq

Genomic Coordinates Forward (+)

223942 .. 230711

Gene Structure 6770 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0001900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2712 bp

ATGGCAACAGAAAAGATGCATCGTTGCCTAGGAAGAACCAATAATGATAGCCAAAAAATATCAATCAGAAGAAAATTTAAAGAAAAGAATAGTTTGCGGACATCCTTAGAGGATTGGGAAGCGGCTTCTGTCGCACGGAGGAACTTTAACCATAGTTTGAGGATTGTTGCACTACCATTGCATTGCCCGGTCAGTACGAATTTCTCAGGATCTGGTGCTCGGGTGAATATGGATAGTTTGCGTCTGTTCTATACAAAAGGAGTGAAGGTTATTAGTCCAAAGGTGCAGCAAGGTTCTCCGCTTGCTGGTTCTTATTGTGGCAAATCATTTACGAATAGCCGCTTTGCTGTCTCAACTGTGAGACACCAATCTCGAAATAAAGAATTGGCATATGAAGCTACTAAATCGAATGAGCTTTCCAGGGAATCTTGTCAGAAGTCATTGACCTGCAGTGCTTCCTCAAGTATGATTGCAACTGGTTCTAATTCTAACAACTTGTCGGATACAGTTGGTGGTAGCAAAAAAGTTGACAATGTAAAGAGAAAATCAAGAAAGAAGGGGAAAAAGGGCAAGAAGCTTTCAGGCACCAGTAGCTCCACTGGACCTCACATGCTGTCAGTAGAATGTGCTGATGAAAGTTCAGCTTCCGAAACCTGTGGTAACAGTGGCGGGAGTGGGCACTGTGGGCCAGTATCACTTTCAACTACCCCAGAAGTTTCATTGCCTGAGAGTGGGGTCAAGAATGAATCCCCAAAATCATGCATCTCTCATCAAGATGAGCTGGAAGTGTATATACCTTCTGTGGGTTATTTGGGACATCAGAGTGTACTCCAAGATTCTGAGTTTCCCATCGAAGATTGGGTAGGGAGTATCCCTCGTATACAAATGAGTCATTGTAATGATCTCCATACCGGAGGTTACTCTGATATGCATGACTCTTTTGTTTTGGATTCAATTTCAGTTGGTTCAAACTGTGATGATAATGACAGTGATGGTCATGATGAAAAACATGCTGAGAAGGAAATTCACAGATTATATGAATCATCAGGTTTCAGTTCCAGAAAGGGATATTTTTCCTGTCAAAGCTTGTTGAATGATGTTGTAAAAATCCATGACAGTAGTGAGAGAACCAGGCATGGTATTCCAAAGAGAGCGGATAAAATGGAACTAAAAGATAGGGTTTCCAAGGAGTTAGAAAGAGAAGGTGAATCAAATCTGCTTCAGGTGCAGTACCTTCCTCATTTACTTTGTAAGGCAGGAATTCAAGCACAGAAAGAAACCTCACTTGCCGAAAGCAGCAGGGTAAATCCCAGTTCTGGATCTCTAAACCACAAGTTGGTGCCCATTGAGTTAAAGGATCCAGTGACAAGCTCTACTTCCAGTTTAGCTGATGTACATTCGGATAAGCCAGCTGATAAGAGATGGACTCCCACAGATGCTGCTAAAGGGATTACTGAAAATAATAGTTCTGAAGAAGCAGTAGTCTGCGTCGGTCAGAGTTCTGGAGACGTAACTTGTAATTCCGATAAAACTGAGGACATGCTTCTAAAATTAGGGTATCAGGATGCAAGCACAATTGAAGAGCTAAAAGACAAGCTTAATGCAGCTAAATGCATGAATTTTGAATCTAAAGATCTGAATGCAGTTGAACCTGAGTCAAACAGAATAATAGAAGCAGTGAATAATGCATGCAGGGCACAACTGGCATCTGAAGCTGTTCAAATGTTCACTGGTGGTCCAATTGCTGAATTTGAAAGACTTCTTTATCATTCATCCCCAGTTGTTCATGAATCACCCAATTTTATAAGGTGTCAAACTTGCTCACGGAACCAGGTACCAAGATTGCCAGTTTGCAGACATGAGACAACTAACATCTGTTTAGGATGCCTATGGAAGTGGTATCAGAGAAGTGGGAGTTATGGATTGGAAATAAGGGCAGAGGAATTTGGAAATTCAAAGGGACTGGGTGCTGATCGTTGTGCATTTCATGCTTATTTTGCTCCTTACTTGTCAGCGATTCAGCTTTTCCGGAGCTGTAGGAGTGATTCAGTCTGTAATGCAGTCTCTATAAACGAGCTGTGTATTTCGAAACAATCTTCAGCTCCAGCCAACAATCCTGTCCAGTTAACTGATACAACGAGGTCAAGTGACTTGGAGCTGCTTTTTGAATATTTTGAGTCTGAACAGCCTCAGCAGAGACAACCTTTGTATGACAAGATAAAGGAACTGATTAGAGGTGATCAACCATCATATTCAAATGTTTATGGAGATCCAACTATTCTAGAAACGATAAATCTAAATGATCTCCATCCCAGATCCTGGTATTCAGTGGCATGGTATCCTATTTACAGGATACCTCATGGAAACTTGCGTGCGGCCTTCTTGACTTACCATTCTCTTGGTCATTTGGTCTGTAGAAGTGCCAATTTTGAGTCTCCAAGTGTGGATGCATGTATAGTATCTCCAGTTGTGGGTCTTCAGAGTTACAATGCTCAGGATGAATGCTGGTTCCAGCCAAGGCACTCGGGACGGAGGCAGACAACTGTAACACCAGGGCCAGGCTTAAACTGTTATAATGGAGTCTTGGAGGAGCGTTTGAGAACACTTGAGGAAACGGCATCTCTTATGGCAAGAGCTGTTGTGAAGAAAGGAAGTATGACATCTGTAAACAGGCATCCAGACTATGAGTTCTTCCTTTCTAGGCGTCGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0009295 GO:0009507 GO:0009526 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009941 GO:0016020 GO:0031967 GO:0031974 GO:0031975 GO:0031976 GO:0031981 GO:0031984 GO:0034357 GO:0042651 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0048046 GO:0055035 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GTP_EFTU GTP_EFTU_D2 GTP_EFTU_D3

Protein Analysis

903

Amino Acids

99.95

Weight (kDa)

7.31

Isoelectric Point (pI)

52.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF789	PF05623	582 - 898	1.9e-62	Protein of unknown function (DUF789)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004416)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G20360 AT4G20360
fragaria_vesca	FvH4_5g06350 FvH4_6g51880
malus_domestica	MD06G1165400.v1.1 MD09G1022300.v1.1 MD14G1170900.v1.1
prunus_persica	Prupe.3G294300_v2.0.a1 Prupe.5G165000_v2.0.a1 Prupe.5G165000_v2.0.a1
pyrus_communis	pycom06g14780 pycom111g01870 pycom14g14280
rosa_chinensis	RchiOBHm_Chr2g0173371 RchiOBHm_Chr7g0192491
rosa_laevigata	RLG00000004361 RLG00000022183
rosa_multiflora	Rmu_sc0003108.1_g000029 Rmu_sc0014554.1_g000001
rosa_roxburghii	Rroxscaffold_2G00078950 Rroxscaffold_3G00262980
rosa_rugosa	Rorug02G0567600 Rorug07G0001900
rosa_samantha	Rh2AG648100 Rh2BG658700 Rh2DG674100 Rh7AG125900 Rh7BG128200 Rh7CG129800 Rh7DG129700
rosa_wichuraiana	Rw2G053200 Rw7G010840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1805, 2574
Acc36I	ACCTGC	1 cut(s)	455
Acc65I	GGTACC	1 cut(s)	1834
AccB1I	GGYRCC	3 cut(s)	584, 1339, 1834
AccB7I	CCANNNNNTGG	2 cut(s)	1336, 2319
AccBSI	CCGCTC	1 cut(s)	1154
AccI	GTMKAC	1 cut(s)	880
AccIII	TCCGGA	1 cut(s)	2028
AciI	CCGC	7 cut(s)	97, 122, 299, 340, 669, 1154, 2375
AclWI	GGATC	6 cut(s)	217, 1327, 1352, 1365, 2264, 2310
AcsI	RAATTY	8 cut(s)	74, 199, 1023, 1260, 1618, 1748, 1943, 1951
AcuI	CTGAAG	5 cut(s)	1205, 1491, 1731, 2082, 2462
AcyI	GRCGYC	1 cut(s)	2704
AfaI	GTAC	5 cut(s)	196, 828, 1232, 1395, 1836
AfiI	CCNNNNNNNGG	8 cut(s)	305, 731, 803, 1316, 1336, 2319, 2471, 2558
AjnI	CCWGG	6 cut(s)	419, 1130, 1830, 2318, 2551, 2557
Alw21I	GWGCWC	1 cut(s)	220
Alw26I	GTCTC	7 cut(s)	355, 355, 1500, 1856, 2068, 2191, 2439
AlwI	GGATC	6 cut(s)	217, 1327, 1352, 1365, 2264, 2310
AlwNI	CAGNNNCTG	3 cut(s)	212, 1439, 2319
Ama87I	CYCGRG	2 cut(s)	219, 2524
Aor13HI	TCCGGA	1 cut(s)	2028
AoxI	GGCC	3 cut(s)	686, 2376, 2555
ApeKI	GCWGC	5 cut(s)	286, 1296, 1439, 1604, 2158
ApoI	RAATTY	8 cut(s)	74, 199, 1023, 1260, 1618, 1748, 1943, 1951
Asp700I	GAANNNNTTC	2 cut(s)	1716, 1758
Asp718I	GGTACC	1 cut(s)	1834
AspA2I	CCTAGG	1 cut(s)	28
AspS9I	GGNCC	4 cut(s)	602, 686, 1736, 2555
AsuC2I	CCSGG	1 cut(s)	188
AsuHPI	GGTGA	4 cut(s)	235, 1217, 1785, 2249
AsuII	TTCGAA	1 cut(s)	2087
AvaI	CYCGRG	2 cut(s)	219, 2524
AvaII	GGWCC	2 cut(s)	602, 1736
AvrII	CCTAGG	1 cut(s)	28
BaeGI	GKGCMC	3 cut(s)	681, 1344, 1699
BamHI	GGATCC	1 cut(s)	1357
BanI	GGYRCC	3 cut(s)	584, 1339, 1834
BarI	GAAGNNNNNNTAC	2 cut(s)	777, 809
BbsI	GAAGAC	1 cut(s)	2468
Bbv12I	GWGCWC	1 cut(s)	220
BbvCI	CCTCAGC	1 cut(s)	2190
BbvI	GCAGC	5 cut(s)	298, 1308, 1426, 1616, 2145
BccI	CCATC	5 cut(s)	857, 986, 1416, 2254, 2316
BceAI	ACGGC	1 cut(s)	2631
BciT130I	CCWGG	6 cut(s)	421, 1132, 1832, 2320, 2553, 2559
BciVI	GTATCC	4 cut(s)	496, 881, 2346, 2349
BclI	TGATCA	1 cut(s)	2239
BcnI	CCSGG	1 cut(s)	188
BcoDI	GTCTC	7 cut(s)	355, 355, 1500, 1856, 2068, 2191, 2439
BfaI	CTAG	4 cut(s)	29, 2282, 2700, 2710
BfmI	CTRYAG	3 cut(s)	448, 2035, 2413
BfuAI	ACCTGC	1 cut(s)	455
BfuI	GTATCC	4 cut(s)	496, 881, 2346, 2349
BglII	AGATCT	1 cut(s)	1633
BisI	GCNGC	8 cut(s)	123, 287, 340, 1297, 1440, 1605, 2159, 2376
BlnI	CCTAGG	1 cut(s)	28
BlsI	GCNGC	8 cut(s)	124, 288, 341, 1298, 1441, 1606, 2160, 2377
Bme1390I	CCNGG	7 cut(s)	188, 421, 1132, 1832, 2320, 2553, 2559
Bme18I	GGWCC	2 cut(s)	602, 1736
BmeT110I	CYCGRG	2 cut(s)	219, 2524
BmgT120I	GGNCC	4 cut(s)	602, 686, 1736, 2555
BmiI	GGNNCC	6 cut(s)	586, 1341, 1359, 1829, 1836, 2510
BmrFI	CCNGG	7 cut(s)	188, 421, 1132, 1832, 2320, 2553, 2559
BmrI	ACTGGG	3 cut(s)	1305, 1772, 1973
BmuI	ACTGGG	3 cut(s)	1305, 1772, 1973
BpiI	GAAGAC	1 cut(s)	2468
BplI	GAGNNNNNCTC	4 cut(s)	859, 891, 1411, 1443
BpmI	CTGGAG	3 cut(s)	1524, 2088, 2448
Bpu10I	CCTNAGC	2 cut(s)	2190, 2493
Bpu14I	TTCGAA	1 cut(s)	2087
BpuEI	CTTGAG	2 cut(s)	445, 2627
BpuMI	CCSGG	1 cut(s)	188
BsaBI	GATNNNNATC	1 cut(s)	2307
BsaHI	GRCGYC	1 cut(s)	2704
BsaJI	CCNNGG	5 cut(s)	28, 420, 1185, 2516, 2552
BsaWI	WCCGGW	2 cut(s)	911, 2028
BsaXI	ACNNNNNCTCC	2 cut(s)	252, 282
Bsc4I	CCNNNNNNNGG	8 cut(s)	305, 731, 803, 1316, 1336, 2319, 2471, 2558
Bse3DI	GCAATG	3 cut(s)	176, 181, 719
Bse8I	GATNNNNATC	1 cut(s)	2307
BseAI	TCCGGA	1 cut(s)	2028
BseBI	CCWGG	6 cut(s)	421, 1132, 1832, 2320, 2553, 2559
BseDI	CCNNGG	5 cut(s)	28, 420, 1185, 2516, 2552
BseGI	GGATG	8 cut(s)	101, 1570, 1772, 1889, 2308, 2452, 2503, 2674
BseJI	GATNNNNATC	1 cut(s)	2307
BseLI	CCNNNNNNNGG	8 cut(s)	305, 731, 803, 1316, 1336, 2319, 2471, 2558
BseMI	GCAATG	3 cut(s)	176, 181, 719
BseMII	CTCAG	8 cut(s)	219, 717, 831, 1005, 1524, 1644, 2204, 2507
BseRI	GAGGAG	1 cut(s)	2603
BseSI	GKGCMC	3 cut(s)	681, 1344, 1699
BseXI	GCAGC	5 cut(s)	298, 1308, 1426, 1616, 2145
BsgI	GTGCAG	2 cut(s)	305, 1247
BshFI	GGCC	3 cut(s)	688, 2378, 2557
BshNI	GGYRCC	3 cut(s)	584, 1339, 1834
BsiHKAI	GWGCWC	1 cut(s)	220
BsiHKCI	CYCGRG	2 cut(s)	219, 2524
BsiSI	CCGG	3 cut(s)	188, 912, 2029
BslFI	GGGAC	3 cut(s)	828, 1974, 2541
BslI	CCNNNNNNNGG	8 cut(s)	305, 731, 803, 1316, 1336, 2319, 2471, 2558
BsmAI	GTCTC	7 cut(s)	355, 355, 1500, 1856, 2068, 2191, 2439
BsmBI	CGTCTC	1 cut(s)	1500
BsmFI	GGGAC	3 cut(s)	828, 1974, 2541
BsmI	GAATGC	2 cut(s)	1645, 2507
BsnI	GGCC	3 cut(s)	688, 2378, 2557
BsoBI	CYCGRG	2 cut(s)	219, 2524
Bsp119I	TTCGAA	1 cut(s)	2087
Bsp1286I	GDGCHC	4 cut(s)	220, 681, 1344, 1699
Bsp13I	TCCGGA	1 cut(s)	2028
Bsp1407I	TGTACA	1 cut(s)	1393
BspACI	CCGC	7 cut(s)	97, 122, 299, 340, 669, 1154, 2375
BspANI	GGCC	3 cut(s)	688, 2378, 2557
BspCNI	CTCAG	8 cut(s)	218, 718, 832, 1006, 1525, 1645, 2203, 2506
BspEI	TCCGGA	1 cut(s)	2028
BspHI	TCATGA	2 cut(s)	997, 1786
BspLI	GGNNCC	6 cut(s)	586, 1341, 1359, 1829, 1836, 2510
BspMAI	CTGCAG	1 cut(s)	452
BspMI	ACCTGC	1 cut(s)	455
BspPI	GGATC	6 cut(s)	217, 1327, 1352, 1365, 2264, 2310
BspQI	GCTCTTC	1 cut(s)	1575
BspT104I	TTCGAA	1 cut(s)	2087
BspT107I	GGYRCC	3 cut(s)	584, 1339, 1834
BsrBI	CCGCTC	1 cut(s)	1154
BsrDI	GCAATG	3 cut(s)	176, 181, 719
BsrGI	TGTACA	1 cut(s)	1393
BssECI	CCNNGG	5 cut(s)	28, 420, 1185, 2516, 2552
BssNAI	GTATAC	1 cut(s)	881
BssNI	GRCGYC	1 cut(s)	2704
BssT1I	CCWWGG	3 cut(s)	28, 1185, 2516
Bst1107I	GTATAC	1 cut(s)	881
Bst2UI	CCWGG	6 cut(s)	421, 1132, 1832, 2320, 2553, 2559
Bst4CI	ACNGT	9 cut(s)	358, 508, 665, 683, 974, 989, 1118, 2545, 2570
Bst6I	CTCTTC	1 cut(s)	1575
BstACI	GRCGYC	1 cut(s)	2704
BstAPI	GCANNNNNTGC	1 cut(s)	1988
BstAUI	TGTACA	1 cut(s)	1393
BstBI	TTCGAA	1 cut(s)	2087
BstC8I	GCNNGC	5 cut(s)	303, 1410, 1570, 1690, 2373
BstDEI	CTNAG	9 cut(s)	106, 205, 726, 840, 1014, 1533, 1653, 2190, 2493
BstF5I	GGATG	8 cut(s)	101, 1570, 1772, 1889, 2308, 2452, 2503, 2674
BstMAI	GTCTC	7 cut(s)	355, 355, 1500, 1856, 2068, 2191, 2439
BstNI	CCWGG	6 cut(s)	421, 1132, 1832, 2320, 2553, 2559
BstNSI	RCATGY	5 cut(s)	613, 1013, 1543, 1692, 2454
BstSCI	CCNGG	7 cut(s)	186, 419, 1130, 1830, 2318, 2551, 2557
BstSFI	CTRYAG	3 cut(s)	448, 2035, 2413
BstSLI	GKGCMC	3 cut(s)	681, 1344, 1699
BstV1I	GCAGC	5 cut(s)	298, 1308, 1426, 1616, 2145
BstV2I	GAAGAC	1 cut(s)	2468
BstX2I	RGATCY	6 cut(s)	209, 1319, 1357, 1633, 2269, 2315
BstXI	CCANNNNNNTGG	1 cut(s)	2399
BstYI	RGATCY	6 cut(s)	209, 1319, 1357, 1633, 2269, 2315
BstZ17I	GTATAC	1 cut(s)	881
BsuI	GTATCC	4 cut(s)	496, 881, 2346, 2349
BsuRI	GGCC	3 cut(s)	688, 2378, 2557
BtsCI	GGATG	8 cut(s)	101, 1570, 1772, 1889, 2308, 2452, 2503, 2674
BtsI	GCAGTG	2 cut(s)	457, 1683
BtsIMutI	CAGTG	9 cut(s)	457, 597, 670, 679, 994, 1368, 1683, 1728, 2334
BveI	ACCTGC	1 cut(s)	455
Cac8I	GCNNGC	5 cut(s)	303, 1410, 1570, 1690, 2373
CaiI	CAGNNNCTG	3 cut(s)	212, 1439, 2319
CciI	TCATGA	2 cut(s)	997, 1786
Cfr13I	GGNCC	4 cut(s)	602, 686, 1736, 2555
CseI	GACGC	3 cut(s)	230, 1477, 2693
CsiI	ACCWGGT	1 cut(s)	1830
Csp6I	GTAC	5 cut(s)	195, 827, 1231, 1394, 1835
CviQI	GTAC	5 cut(s)	195, 827, 1231, 1394, 1835
DdeI	CTNAG	9 cut(s)	106, 205, 726, 840, 1014, 1533, 1653, 2190, 2493
DraI	TTTAAA	1 cut(s)	79
Eam1104I	CTCTTC	1 cut(s)	1575
EarI	CTCTTC	1 cut(s)	1575
Eco130I	CCWWGG	3 cut(s)	28, 1185, 2516
Eco47I	GGWCC	2 cut(s)	602, 1736
Eco57I	CTGAAG	5 cut(s)	1205, 1491, 1731, 2082, 2462
Eco88I	CYCGRG	2 cut(s)	219, 2524
EcoRI	GAATTC	1 cut(s)	1260
EcoRII	CCWGG	6 cut(s)	419, 1130, 1830, 2318, 2551, 2557
EcoT14I	CCWWGG	3 cut(s)	28, 1185, 2516
EcoT22I	ATGCAT	6 cut(s)	21, 764, 933, 1616, 1690, 2452
ErhI	CCWWGG	3 cut(s)	28, 1185, 2516
Esp3I	CGTCTC	1 cut(s)	1500
FalI	AAGNNNNNCTT	6 cut(s)	628, 660, 1360, 1392, 1581, 1613
FaqI	GGGAC	3 cut(s)	828, 1974, 2541
FauI	CCCGC	1 cut(s)	662
FauNDI	CATATG	1 cut(s)	391
FbaI	TGATCA	1 cut(s)	2239
FblI	GTMKAC	1 cut(s)	880
Fnu4HI	GCNGC	8 cut(s)	123, 287, 340, 1297, 1440, 1605, 2159, 2376
FokI	GGATG	8 cut(s)	88, 1577, 1759, 1896, 2295, 2459, 2510, 2661
Fsp4HI	GCNGC	8 cut(s)	123, 287, 340, 1297, 1440, 1605, 2159, 2376
FspBI	CTAG	4 cut(s)	29, 2282, 2700, 2710
GluI	GCNGC	8 cut(s)	123, 287, 340, 1297, 1440, 1605, 2159, 2376
GsuI	CTGGAG	3 cut(s)	1524, 2088, 2448
HaeIII	GGCC	3 cut(s)	688, 2378, 2557
HapII	CCGG	3 cut(s)	188, 912, 2029
HgaI	GACGC	3 cut(s)	230, 1477, 2693
Hin1I	GRCGYC	1 cut(s)	2704
HincII	GTYRAC	2 cut(s)	529, 2127
HindII	GTYRAC	2 cut(s)	529, 2127
HindIII	AAGCTT	3 cut(s)	575, 1084, 1595
HpaI	GTTAAC	1 cut(s)	2127
HpaII	CCGG	3 cut(s)	188, 912, 2029
HphI	GGTGA	4 cut(s)	235, 1217, 1785, 2249
Hpy166II	GTNNAC	6 cut(s)	529, 827, 881, 1728, 2127, 2668
Hpy8I	GTNNAC	6 cut(s)	529, 827, 881, 1728, 2127, 2668
Hpy99I	CGWCG	2 cut(s)	1493, 2709
HpyAV	CCTTC	7 cut(s)	259, 550, 807, 1012, 1196, 1244, 2389
HpyCH4III	ACNGT	9 cut(s)	358, 508, 665, 683, 974, 989, 1118, 2545, 2570
HpyCH4IV	ACGT	1 cut(s)	1509
HpyF3I	CTNAG	9 cut(s)	106, 205, 726, 840, 1014, 1533, 1653, 2190, 2493
HpySE526I	ACGT	1 cut(s)	1509
Hsp92I	GRCGYC	1 cut(s)	2704
Kpn2I	TCCGGA	1 cut(s)	2028
KpnI	GGTACC	1 cut(s)	1838
Ksp22I	TGATCA	1 cut(s)	2239
KspAI	GTTAAC	1 cut(s)	2127
LguI	GCTCTTC	1 cut(s)	1575
LmnI	GCTCC	6 cut(s)	599, 2005, 2031, 2107, 2155, 2590
Lsp1109I	GCAGC	5 cut(s)	298, 1308, 1426, 1616, 2145
MabI	ACCWGGT	1 cut(s)	1830
MaeI	CTAG	4 cut(s)	29, 2282, 2700, 2710
MaeII	ACGT	1 cut(s)	1509
MaeIII	GTNAC	7 cut(s)	659, 917, 1363, 1510, 2147, 2483, 2545
MbiI	CCGCTC	1 cut(s)	1154
MboII	GAAGA	9 cut(s)	45, 81, 866, 1484, 1592, 2088, 2468, 2656, 2683
MfeI	CAATTG	2 cut(s)	1575, 1740
MflI	RGATCY	6 cut(s)	209, 1319, 1357, 1633, 2269, 2315
MhlI	GDGCHC	4 cut(s)	220, 681, 1344, 1699
MlyI	GAGTC	7 cut(s)	898, 929, 1420, 1664, 2186, 2441, 2589
MmeI	TCCRAC	2 cut(s)	480, 2297
Mph1103I	ATGCAT	6 cut(s)	21, 764, 933, 1616, 1690, 2452
MroI	TCCGGA	1 cut(s)	2028
MroXI	GAANNNNTTC	2 cut(s)	1716, 1758
MseI	TTAA	6 cut(s)	78, 147, 1352, 1599, 2126, 2564
MslI	CAYNNNNRTG	3 cut(s)	774, 822, 897
MspA1I	CMGCKG	1 cut(s)	1412
MspI	CCGG	3 cut(s)	188, 912, 2029
MspR9I	CCNGG	7 cut(s)	188, 421, 1132, 1832, 2320, 2553, 2559
MunI	CAATTG	2 cut(s)	1575, 1740
Mva1269I	GAATGC	2 cut(s)	1645, 2507
MvaI	CCWGG	6 cut(s)	421, 1132, 1832, 2320, 2553, 2559
NciI	CCSGG	1 cut(s)	188
NdeI	CATATG	1 cut(s)	391
NlaIV	GGNNCC	6 cut(s)	586, 1341, 1359, 1829, 1836, 2510
NmuCI	GTSAC	2 cut(s)	1363, 2147
NsiI	ATGCAT	6 cut(s)	21, 764, 933, 1616, 1690, 2452
NspI	RCATGY	5 cut(s)	613, 1013, 1543, 1692, 2454
NspV	TTCGAA	1 cut(s)	2087
PaeI	GCATGC	1 cut(s)	1692
PagI	TCATGA	2 cut(s)	997, 1786
PciSI	GCTCTTC	1 cut(s)	1575
PctI	GAATGC	2 cut(s)	1645, 2507
PdmI	GAANNNNTTC	2 cut(s)	1716, 1758
PflMI	CCANNNNNTGG	2 cut(s)	1336, 2319
PkrI	GCNGC	8 cut(s)	124, 288, 341, 1298, 1441, 1606, 2160, 2377
PleI	GAGTC	7 cut(s)	897, 929, 1420, 1663, 2185, 2440, 2588
PpsI	GAGTC	7 cut(s)	897, 929, 1420, 1663, 2185, 2440, 2588
PsiI	TTATAA	2 cut(s)	1805, 2574
Psp6I	CCWGG	6 cut(s)	419, 1130, 1830, 2318, 2551, 2557
PspGI	CCWGG	6 cut(s)	419, 1130, 1830, 2318, 2551, 2557
PspN4I	GGNNCC	6 cut(s)	586, 1341, 1359, 1829, 1836, 2510
PspPI	GGNCC	4 cut(s)	602, 686, 1736, 2555
PstI	CTGCAG	1 cut(s)	452
PstNI	CAGNNNCTG	3 cut(s)	212, 1439, 2319
PsuI	RGATCY	6 cut(s)	209, 1319, 1357, 1633, 2269, 2315
PvuII	CAGCTG	1 cut(s)	1412
RsaI	GTAC	5 cut(s)	196, 828, 1232, 1395, 1836
RsaNI	GTAC	5 cut(s)	195, 827, 1231, 1394, 1835
RseI	CAYNNNNRTG	3 cut(s)	774, 822, 897
SapI	GCTCTTC	1 cut(s)	1575
SaqAI	TTAA	6 cut(s)	78, 147, 1352, 1599, 2126, 2564
SatI	GCNGC	8 cut(s)	123, 287, 340, 1297, 1440, 1605, 2159, 2376
Sau96I	GGNCC	4 cut(s)	602, 686, 1736, 2555
SchI	GAGTC	7 cut(s)	898, 929, 1420, 1664, 2186, 2441, 2589
ScrFI	CCNGG	7 cut(s)	188, 421, 1132, 1832, 2320, 2553, 2559
SduI	GDGCHC	4 cut(s)	220, 681, 1344, 1699
SexAI	ACCWGGT	1 cut(s)	1830
SfcI	CTRYAG	3 cut(s)	448, 2035, 2413
SfuI	TTCGAA	1 cut(s)	2087
SinI	GGWCC	2 cut(s)	602, 1736
SmiMI	CAYNNNNRTG	3 cut(s)	774, 822, 897
SmlI	CTYRAG	2 cut(s)	460, 2606
SmoI	CTYRAG	2 cut(s)	460, 2606
SphI	GCATGC	1 cut(s)	1692
SsiI	CCGC	7 cut(s)	97, 122, 299, 340, 669, 1154, 2375
SspI	AATATT	1 cut(s)	2171
SspMI	CTAG	4 cut(s)	29, 2282, 2700, 2710
StyD4I	CCNGG	7 cut(s)	186, 419, 1130, 1830, 2318, 2551, 2557
StyI	CCWWGG	3 cut(s)	28, 1185, 2516
TaaI	ACNGT	9 cut(s)	358, 508, 665, 683, 974, 989, 1118, 2545, 2570
TaiI	ACGT	1 cut(s)	1512
TaqI	TCGA	4 cut(s)	373, 407, 852, 2087
TaqII	GACCGA	1 cut(s)	1481
TatI	WGTACW	2 cut(s)	826, 1393
TauI	GCSGC	3 cut(s)	125, 342, 2378
Tru1I	TTAA	6 cut(s)	78, 147, 1352, 1599, 2126, 2564
Tru9I	TTAA	6 cut(s)	78, 147, 1352, 1599, 2126, 2564
TscAI	CASTG	9 cut(s)	457, 604, 670, 686, 994, 1368, 1683, 1735, 2334
TseFI	GTSAC	2 cut(s)	1363, 2147
TseI	GCWGC	5 cut(s)	286, 1296, 1439, 1604, 2158
Tsp45I	GTSAC	2 cut(s)	1363, 2147
TspGWI	ACGGA	3 cut(s)	151, 1840, 2545
TspRI	CASTG	9 cut(s)	457, 604, 670, 686, 994, 1368, 1683, 1735, 2334
Van91I	CCANNNNNTGG	2 cut(s)	1336, 2319
VpaK11BI	GGWCC	2 cut(s)	602, 1736
XapI	RAATTY	8 cut(s)	74, 199, 1023, 1260, 1618, 1748, 1943, 1951
XbaI	TCTAGA	1 cut(s)	2281
XceI	RCATGY	5 cut(s)	613, 1013, 1543, 1692, 2454
XmaJI	CCTAGG	1 cut(s)	28
XmiI	GTMKAC	1 cut(s)	880
XmnI	GAANNNNTTC	2 cut(s)	1716, 1758
XspI	CTAG	4 cut(s)	29, 2282, 2700, 2710
Zsp2I	ATGCAT	6 cut(s)	21, 764, 933, 1616, 1690, 2452

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.