Rh7BG128200

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Forward (+)
9471731 .. 9474305
2575 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG128200.1

Sequence Viewer

Length: 1446 bp
ATGGCAATCTCAACAGCAGCAGCAGCAGCAGCGGCAGCTTCCTCAAAGCTCACATACCCTTATGCCTCCTCACCTTCTTCAACCCCTTCTTCTTTCTCAATTAGACCCACTTCCAAGCTCACCCACCTCTCCTCTTCCTTCCTAAACCCCTCCACCATCCTCCACCTCACTCCCTCCTCCACCACCACCACCACGCGCCGCTCCTTCACCGTCAAGGCCGCGCGTGGCAAGTTCGAGCGCAAGAAGCCCCACGTCAACATCGGCACCATCGGCCACGTCGACCACGGCAAGACCACCCTCACCGCCGCCCTCACCATGGCCCTCGCCTCCATGGGCAACAGCGTCGTCAAGAAGTACGACGAAATCGACGCCGCGCCGGAGGAGCGCGCGCGCGGAATCACCATCAACACCGCCACCGTCGAGTACGAGACCGAGAGCCGCCACTACGCCCACGTCGACTGCCCCGGCCACGCCGACTACGTCAAGAACATGATCACCGGAGCCGCCCAGATGGACGGCGCCATCCTCGTCTGCTCCGGCGCCGACGGCCCAATGCCGCAGACCAAAGAGCACATCTTGCTCGCCAAGCAAGTCGGCGTGCCCAACATGGTGGTCTTCCTCAACAAACAGGACCAGGTCGACGACGAGGAGCTTCTCGAGCTCGTCGAATTGGAGGTGCGTGAGTTGCTTTCTTCATATGAGTTTCCCGGTGATGATGTGCCCATCATTTCCGGTTCGGCTTTGTTAGCACTAGAGGCCTTGATGGCTAACCCTGCTATTAAGCGTGGTGATAATAAATGGGTAGATAAGATTTATGAGCTTATGGATTCTGTTGATAGCTACATACCTATTCCGCAACGGCAGACTGAGCTGCCGTTTTTGATGGCCATTGAAGATGTGTTTTCCATCACTGGCCGTGGGACTGTGGCCACCGGCCGTGTCGAGAGGGGCACCATTAAGACTGGGGATACAGTCGACATTGTTGGGTTGAAGGATACGAGAAGCACCACTGTTACTGGTGTGGAGATGTTTCAGAAGATTCTCGATGAGGCTCTGGCCGGTGACAATGTGGGGTTGTTGCTCAGGGGTATTCAGAAGATTGATATTCAGAGAGGGATGGTGTTGGCTAAGCCGGGGACTATTACCCCGCATACTAAGTTTGAGGCGATTGTCTATGTGTTGAAGAAGGAAGAGGGTGGTAGGCATTCCCCCTTTTTCTCGGGTTATAGGCCACAGTTTTACATGAGGACTACTGATGTCACCGGTAGAGTGACTCAGATTATGAATGATAAGGATGAGGAGTCCAAGATGGTTATGCCTGGTGATCGTGTCAAGATTATTGTCGAATTGATTGTGCCTGTGGCTTGTGAGTCCGGAATGAGGTTTGCTATCAGAGAAGGAGGGAAGACTGTTGGAGCAGGTGTTATTGGAGCCATACTTGAGTGA

Protein Analysis

481

Amino Acids

52.09

Weight (kDa)

6.05

Isoelectric Point (pI)

35.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GTP_EFTU PF00009 82 - 283 1.2e-61 Elongation factor Tu GTP binding domain
GTP_EFTU_D2 PF03144 307 - 376 1.2e-20 Elongation factor Tu domain 2
GTP_EFTU_D3 PF03143 380 - 479 5.3e-39 Elongation factor Tu C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1409
Acc36I ACCTGC 1 cut(s) 1409
AccB1I GGYRCC 4 cut(s) 263, 518, 539, 950
AccBSI CCGCTC 1 cut(s) 201
AccI GTMKAC 4 cut(s) 279, 456, 639, 975
AccII CGCG 8 cut(s) 196, 221, 223, 374, 387, 389, 391, 393
AccIII TCCGGA 1 cut(s) 1373
AcoI YGGCCR 7 cut(s) 271, 466, 885, 913, 927, 934, 1056
AcyI GRCGYC 3 cut(s) 369, 519, 540
AfaI GTAC 2 cut(s) 356, 425
AfiI CCNNNNNNNGG 2 cut(s) 316, 1380
AgeI ACCGGT 1 cut(s) 1262
AgsI TTSAA 4 cut(s) 81, 893, 991, 1183
AjiI CACGTC 3 cut(s) 253, 277, 454
AjnI CCWGG 2 cut(s) 633, 1318
AluBI AGCT 8 cut(s) 38, 49, 118, 652, 661, 820, 840, 871
AluI AGCT 8 cut(s) 38, 49, 118, 652, 661, 820, 840, 871
Alw21I GWGCWC 2 cut(s) 573, 663
Alw26I GTCTC 1 cut(s) 422
Ama87I CYCGRG 2 cut(s) 656, 1219
Aor13HI TCCGGA 1 cut(s) 1373
ApeKI GCWGC 7 cut(s) 17, 20, 23, 26, 29, 35, 871
AsiGI ACCGGT 1 cut(s) 1262
AspS9I GGNCC 3 cut(s) 319, 548, 631
AsuC2I CCSGG 3 cut(s) 465, 708, 1134
AvaI CYCGRG 2 cut(s) 656, 1219
AvaII GGWCC 1 cut(s) 631
BaeGI GKGCMC 3 cut(s) 603, 723, 953
BalI TGGCCA 2 cut(s) 887, 929
BanI GGYRCC 4 cut(s) 263, 518, 539, 950
BanII GRGCYC 1 cut(s) 663
BbsI GAAGAC 2 cut(s) 607, 1412
Bbv12I GWGCWC 2 cut(s) 573, 663
BbvI GCAGC 7 cut(s) 29, 32, 35, 38, 41, 47, 858
BceAI ACGGC 7 cut(s) 301, 532, 562, 859, 875, 900, 921
BcgI CGANNNNNNTGC 2 cut(s) 325, 359
BciT130I CCWGG 2 cut(s) 635, 1320
BciVI GTATCC 2 cut(s) 961, 988
BclI TGATCA 1 cut(s) 492
BcnI CCSGG 3 cut(s) 465, 708, 1134
BcoDI GTCTC 1 cut(s) 422
BfaI CTAG 1 cut(s) 752
BfoI RGCGCY 2 cut(s) 522, 543
BfuAI ACCTGC 1 cut(s) 1409
BfuI GTATCC 2 cut(s) 961, 988
BglI GCCNNNNNGGC 1 cut(s) 764
BlpI GCTNAGC 1 cut(s) 1128
Bme1390I CCNGG 5 cut(s) 465, 635, 708, 1134, 1320
Bme18I GGWCC 1 cut(s) 631
BmeT110I CYCGRG 2 cut(s) 656, 1219
BmgBI CACGTC 3 cut(s) 253, 277, 454
BmgT120I GGNCC 3 cut(s) 319, 548, 631
BmiI GGNNCC 6 cut(s) 265, 502, 520, 541, 952, 1432
BmrFI CCNGG 5 cut(s) 465, 635, 708, 1134, 1320
BmrI ACTGGG 1 cut(s) 972
BmuI ACTGGG 1 cut(s) 972
BpiI GAAGAC 2 cut(s) 607, 1412
Bpu10I CCTNAGC 1 cut(s) 1082
Bpu1102I GCTNAGC 1 cut(s) 1128
BpuMI CCSGG 3 cut(s) 465, 708, 1134
BsaHI GRCGYC 3 cut(s) 369, 519, 540
BsaI GGTCTC 1 cut(s) 422
BsaJI CCNNGG 6 cut(s) 283, 315, 330, 463, 916, 1133
BsaWI WCCGGW 4 cut(s) 497, 731, 1262, 1373
BsaXI ACNNNNNCTCC 2 cut(s) 1407, 1437
Bsc4I CCNNNNNNNGG 2 cut(s) 316, 1380
Bse118I RCCGGY 3 cut(s) 932, 1058, 1262
Bse1I ACTGG 3 cut(s) 916, 967, 1021
BseAI TCCGGA 1 cut(s) 1373
BseBI CCWGG 2 cut(s) 635, 1320
BseDI CCNNGG 6 cut(s) 283, 315, 330, 463, 916, 1133
BseGI GGATG 4 cut(s) 156, 522, 1122, 1300
BseLI CCNNNNNNNGG 2 cut(s) 316, 1380
BseMII CTCAG 3 cut(s) 858, 1096, 1289
BseNI ACTGG 3 cut(s) 916, 967, 1021
BsePI GCGCGC 3 cut(s) 385, 387, 389
BseRI GAGGAG 6 cut(s) 58, 121, 166, 395, 662, 1313
BseSI GKGCMC 3 cut(s) 603, 723, 953
BseX3I CGGCCG 1 cut(s) 934
BseXI GCAGC 7 cut(s) 29, 32, 35, 38, 41, 47, 858
Bsh1236I CGCG 8 cut(s) 196, 221, 223, 374, 387, 389, 391, 393
Bsh1285I CGRYCG 1 cut(s) 937
BshNI GGYRCC 4 cut(s) 263, 518, 539, 950
BshTI ACCGGT 1 cut(s) 1262
BsiEI CGRYCG 1 cut(s) 937
BsiHKAI GWGCWC 2 cut(s) 573, 663
BsiHKCI CYCGRG 2 cut(s) 656, 1219
BslFI GGGAC 2 cut(s) 934, 1150
BslI CCNNNNNNNGG 2 cut(s) 316, 1380
BsmAI GTCTC 1 cut(s) 422
BsmFI GGGAC 2 cut(s) 934, 1150
BsmI GAATGC 1 cut(s) 1204
Bso31I GGTCTC 1 cut(s) 422
BsoBI CYCGRG 2 cut(s) 656, 1219
Bsp1286I GDGCHC 5 cut(s) 573, 603, 663, 723, 953
Bsp13I TCCGGA 1 cut(s) 1373
Bsp143I GATC 2 cut(s) 492, 1324
Bsp1720I GCTNAGC 1 cut(s) 1128
Bsp19I CCATGG 2 cut(s) 315, 330
BspCNI CTCAG 3 cut(s) 859, 1095, 1288
BspEI TCCGGA 1 cut(s) 1373
BspFNI CGCG 8 cut(s) 196, 221, 223, 374, 387, 389, 391, 393
BspLI GGNNCC 6 cut(s) 265, 502, 520, 541, 952, 1432
BspMI ACCTGC 1 cut(s) 1409
BspT107I GGYRCC 4 cut(s) 263, 518, 539, 950
BspTNI GGTCTC 1 cut(s) 422
BsrBI CCGCTC 1 cut(s) 201
BsrFI RCCGGY 3 cut(s) 932, 1058, 1262
BsrI ACTGG 3 cut(s) 916, 967, 1021
BssAI RCCGGY 3 cut(s) 932, 1058, 1262
BssECI CCNNGG 6 cut(s) 283, 315, 330, 463, 916, 1133
BssHII GCGCGC 3 cut(s) 385, 387, 389
BssMI GATC 2 cut(s) 492, 1324
BssNI GRCGYC 3 cut(s) 369, 519, 540
BssT1I CCWWGG 2 cut(s) 315, 330
Bst2UI CCWGG 2 cut(s) 635, 1320
Bst4CI ACNGT 7 cut(s) 211, 418, 925, 973, 1012, 1236, 1411
Bst6I CTCTTC 2 cut(s) 139, 1185
BstACI GRCGYC 3 cut(s) 369, 519, 540
BstAPI GCANNNNNTGC 1 cut(s) 577
BstC8I GCNNGC 5 cut(s) 387, 389, 391, 582, 599
BstDEI CTNAG 5 cut(s) 867, 1082, 1128, 1155, 1275
BstDSI CCRYGG 4 cut(s) 283, 315, 330, 916
BstF5I GGATG 4 cut(s) 156, 522, 1122, 1300
BstFNI CGCG 8 cut(s) 196, 221, 223, 374, 387, 389, 391, 393
BstH2I RGCGCY 2 cut(s) 522, 543
BstKTI GATC 2 cut(s) 495, 1327
BstMAI GTCTC 1 cut(s) 422
BstMBI GATC 2 cut(s) 492, 1324
BstMCI CGRYCG 1 cut(s) 937
BstNI CCWGG 2 cut(s) 635, 1320
BstSCI CCNGG 5 cut(s) 463, 633, 706, 1132, 1318
BstSLI GKGCMC 3 cut(s) 603, 723, 953
BstUI CGCG 8 cut(s) 196, 221, 223, 374, 387, 389, 391, 393
BstV1I GCAGC 7 cut(s) 29, 32, 35, 38, 41, 47, 858
BstV2I GAAGAC 2 cut(s) 607, 1412
BstXI CCANNNNNNTGG 1 cut(s) 610
BstZI CGGCCG 1 cut(s) 934
BsuI GTATCC 2 cut(s) 961, 988
BtgI CCRYGG 4 cut(s) 283, 315, 330, 916
BtrI CACGTC 3 cut(s) 253, 277, 454
BtsCI GGATG 4 cut(s) 156, 522, 1122, 1300
BtsIMutI CAGTG 2 cut(s) 909, 1008
BveI ACCTGC 1 cut(s) 1409
Cac8I GCNNGC 5 cut(s) 387, 389, 391, 582, 599
Cfr10I RCCGGY 3 cut(s) 932, 1058, 1262
Cfr13I GGNCC 3 cut(s) 319, 548, 631
CseI GACGC 2 cut(s) 331, 377
CsiI ACCWGGT 1 cut(s) 633
Csp6I GTAC 2 cut(s) 355, 424
CspAI ACCGGT 1 cut(s) 1262
CviAII CATG 5 cut(s) 316, 331, 490, 607, 1243
CviQI GTAC 2 cut(s) 355, 424
DdeI CTNAG 5 cut(s) 867, 1082, 1128, 1155, 1275
DinI GGCGCC 2 cut(s) 520, 541
DpnI GATC 2 cut(s) 494, 1326
DpnII GATC 2 cut(s) 492, 1324
EaeI YGGCCR 7 cut(s) 271, 466, 885, 913, 927, 934, 1056
EagI CGGCCG 1 cut(s) 934
Eam1104I CTCTTC 2 cut(s) 139, 1185
EarI CTCTTC 2 cut(s) 139, 1185
Ecl136II GAGCTC 1 cut(s) 661
EclXI CGGCCG 1 cut(s) 934
Eco130I CCWWGG 2 cut(s) 315, 330
Eco147I AGGCCT 1 cut(s) 758
Eco24I GRGCYC 1 cut(s) 663
Eco31I GGTCTC 1 cut(s) 422
Eco47I GGWCC 1 cut(s) 631
Eco52I CGGCCG 1 cut(s) 934
Eco53kI GAGCTC 1 cut(s) 661
Eco88I CYCGRG 2 cut(s) 656, 1219
EcoICRI GAGCTC 1 cut(s) 661
EcoRII CCWGG 2 cut(s) 633, 1318
EcoT14I CCWWGG 2 cut(s) 315, 330
EcoT38I GRGCYC 1 cut(s) 663
EgeI GGCGCC 2 cut(s) 520, 541
EheI GGCGCC 2 cut(s) 520, 541
ErhI CCWWGG 2 cut(s) 315, 330
FaeI CATG 5 cut(s) 319, 334, 493, 610, 1246
FaqI GGGAC 2 cut(s) 934, 1150
FatI CATG 5 cut(s) 315, 330, 489, 606, 1242
FauI CCCGC 1 cut(s) 1155
FauNDI CATATG 1 cut(s) 697
FbaI TGATCA 1 cut(s) 492
FblI GTMKAC 4 cut(s) 279, 456, 639, 975
FokI GGATG 4 cut(s) 143, 509, 1129, 1307
FriOI GRGCYC 1 cut(s) 663
FspBI CTAG 1 cut(s) 752
HaeII RGCGCY 2 cut(s) 522, 543
HgaI GACGC 2 cut(s) 331, 377
Hin1I GRCGYC 3 cut(s) 369, 519, 540
Hin1II CATG 5 cut(s) 319, 334, 493, 610, 1246
HincII GTYRAC 5 cut(s) 256, 280, 457, 640, 976
HindII GTYRAC 5 cut(s) 256, 280, 457, 640, 976
HinfI GANTC 6 cut(s) 396, 827, 1039, 1273, 1301, 1370
Hpy166II GTNNAC 5 cut(s) 256, 280, 457, 640, 976
Hpy188I TCNGA 5 cut(s) 1035, 1095, 1110, 1278, 1394
Hpy188III TCNNGA 7 cut(s) 349, 484, 656, 943, 1043, 1333, 1374
Hpy8I GTNNAC 5 cut(s) 256, 280, 457, 640, 976
HpyAV CCTTC 7 cut(s) 84, 96, 148, 214, 985, 1180, 1391
HpyCH4III ACNGT 7 cut(s) 211, 418, 925, 973, 1012, 1236, 1411
HpyCH4IV ACGT 4 cut(s) 252, 276, 453, 480
HpyF3I CTNAG 5 cut(s) 867, 1082, 1128, 1155, 1275
HpySE526I ACGT 4 cut(s) 252, 276, 453, 480
Hsp92I GRCGYC 3 cut(s) 369, 519, 540
Hsp92II CATG 5 cut(s) 319, 334, 493, 610, 1246
KasI GGCGCC 2 cut(s) 518, 539
Kpn2I TCCGGA 1 cut(s) 1373
Ksp22I TGATCA 1 cut(s) 492
Kzo9I GATC 2 cut(s) 492, 1324
LmnI GCTCC 7 cut(s) 206, 382, 500, 539, 649, 1415, 1430
Lsp1109I GCAGC 7 cut(s) 29, 32, 35, 38, 41, 47, 858
MabI ACCWGGT 1 cut(s) 633
MaeI CTAG 1 cut(s) 752
MaeII ACGT 4 cut(s) 252, 276, 453, 480
MaeIII GTNAC 4 cut(s) 1012, 1061, 1258, 1270
MalI GATC 2 cut(s) 494, 1326
MauBI CGCGCGCG 2 cut(s) 387, 389
MbiI CCGCTC 1 cut(s) 201
MboI GATC 2 cut(s) 492, 1324
MhlI GDGCHC 5 cut(s) 573, 603, 663, 723, 953
MlsI TGGCCA 2 cut(s) 887, 929
MluCI AATT 3 cut(s) 99, 668, 1346
MluNI TGGCCA 2 cut(s) 887, 929
Mly113I GGCGCC 2 cut(s) 519, 540
MlyI GAGTC 3 cut(s) 1267, 1310, 1379
MmeI TCCRAC 1 cut(s) 1393
Mox20I TGGCCA 2 cut(s) 887, 929
MroI TCCGGA 1 cut(s) 1373
MscI TGGCCA 2 cut(s) 887, 929
MseI TTAA 2 cut(s) 780, 957
Msp20I TGGCCA 2 cut(s) 887, 929
MspA1I CMGCKG 1 cut(s) 32
MspR9I CCNGG 5 cut(s) 465, 635, 708, 1134, 1320
Mva1269I GAATGC 1 cut(s) 1204
MvaI CCWGG 2 cut(s) 635, 1320
MvnI CGCG 8 cut(s) 196, 221, 223, 374, 387, 389, 391, 393
NarI GGCGCC 2 cut(s) 519, 540
NciI CCSGG 3 cut(s) 465, 708, 1134
NcoI CCATGG 2 cut(s) 315, 330
NdeI CATATG 1 cut(s) 697
NdeII GATC 2 cut(s) 492, 1324
NlaIII CATG 5 cut(s) 319, 334, 493, 610, 1246
NlaIV GGNNCC 6 cut(s) 265, 502, 520, 541, 952, 1432
NmuCI GTSAC 3 cut(s) 1061, 1258, 1270
PaeR7I CTCGAG 1 cut(s) 656
PaqCI CACCTGC 1 cut(s) 1409
PauI GCGCGC 3 cut(s) 385, 387, 389
PceI AGGCCT 1 cut(s) 758
PcsI WCGNNNNNNNCGW 5 cut(s) 276, 363, 453, 477, 663
PctI GAATGC 1 cut(s) 1204
PfeI GAWTC 3 cut(s) 396, 827, 1039
PflFI GACNNNGTC 2 cut(s) 479, 635
PinAI ACCGGT 1 cut(s) 1262
PleI GAGTC 3 cut(s) 1267, 1309, 1378
PluTI GGCGCC 2 cut(s) 522, 543
PpsI GAGTC 3 cut(s) 1267, 1309, 1378
Psp124BI GAGCTC 1 cut(s) 663
Psp6I CCWGG 2 cut(s) 633, 1318
PspGI CCWGG 2 cut(s) 633, 1318
PspN4I GGNNCC 6 cut(s) 265, 502, 520, 541, 952, 1432
PspPI GGNCC 3 cut(s) 319, 548, 631
PsyI GACNNNGTC 2 cut(s) 479, 635
PteI GCGCGC 3 cut(s) 385, 387, 389
RsaI GTAC 2 cut(s) 356, 425
RsaNI GTAC 2 cut(s) 355, 424
SacI GAGCTC 1 cut(s) 663
SalI GTCGAC 4 cut(s) 278, 455, 638, 974
SaqAI TTAA 2 cut(s) 780, 957
Sau3AI GATC 2 cut(s) 492, 1324
Sau96I GGNCC 3 cut(s) 319, 548, 631
SchI GAGTC 3 cut(s) 1267, 1310, 1379
ScrFI CCNGG 5 cut(s) 465, 635, 708, 1134, 1320
SduI GDGCHC 5 cut(s) 573, 603, 663, 723, 953
SexAI ACCWGGT 1 cut(s) 633
SfoI GGCGCC 2 cut(s) 520, 541
Sfr274I CTCGAG 1 cut(s) 656
SinI GGWCC 1 cut(s) 631
SlaI CTCGAG 1 cut(s) 656
SmlI CTYRAG 2 cut(s) 656, 1439
SmoI CTYRAG 2 cut(s) 656, 1439
Sse9I AATT 3 cut(s) 99, 668, 1346
SseBI AGGCCT 1 cut(s) 758
SspDI GGCGCC 2 cut(s) 518, 539
SspMI CTAG 1 cut(s) 752
SstI GAGCTC 1 cut(s) 663
StuI AGGCCT 1 cut(s) 758
StyD4I CCNGG 5 cut(s) 463, 633, 706, 1132, 1318
StyI CCWWGG 2 cut(s) 315, 330
TaaI ACNGT 7 cut(s) 211, 418, 925, 973, 1012, 1236, 1411
TaiI ACGT 4 cut(s) 255, 279, 456, 483
TaqII GACCGA 1 cut(s) 446
TasI AATT 3 cut(s) 99, 668, 1346
TauI GCSGC 8 cut(s) 35, 201, 221, 308, 374, 441, 506, 559
TfiI GAWTC 3 cut(s) 396, 827, 1039
Tru1I TTAA 2 cut(s) 780, 957
Tru9I TTAA 2 cut(s) 780, 957
TscAI CASTG 2 cut(s) 916, 1015
TseFI GTSAC 3 cut(s) 1061, 1258, 1270
TseI GCWGC 7 cut(s) 17, 20, 23, 26, 29, 35, 871
Tsp45I GTSAC 3 cut(s) 1061, 1258, 1270
TspDTI ATGAA 2 cut(s) 684, 1298
TspRI CASTG 2 cut(s) 916, 1015
Tth111I GACNNNGTC 2 cut(s) 479, 635
VpaK11BI GGWCC 1 cut(s) 631
XhoI CTCGAG 1 cut(s) 656
XmiI GTMKAC 4 cut(s) 279, 456, 639, 975
XspI CTAG 1 cut(s) 752
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.