Prupe.5G165000_v2.0.a1

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
14352333 .. 14354454
2122 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G165000.1

Sequence Viewer

Length: 1455 bp
ATGGCAATTTCAACAGCAGCAGCAGCCTCAGCTTCCTCAAAGCTCACTTACCCATATGCCTCTCAGTCCTCTCAGCCCTCACCGGCCTCCTCTATCTCCATTAGACCCTCTTCCAAGCTAACCCATCTCTCCTCTTCCTTCCTCAACCCCTCCACCATCCTCCACCTCACGCCCACCACTACTCTCCCCCTCCACCACCACCACCACCGCAGTTTCACAGTCAAAGCTGCTCGAGGTAAGTTCGAGCGCAAGAAGCCCCATGTCAACATCGGCACAATCGGCCACGTCGACCACGGCAAGACCACTCTCACTGCAGCTCTCACCATGGCCTTGGCCTCCATTGGAGGCAGCGCTTCCAAGAAGTACGACGAAATCGACGCCGCCCCAGAAGAGCGCGCTCGTGGAATCACCATTAACACTGCCACAGTCGAGTACGAGACTGAGAATCGGCACTACGCCCACGTTGACTGCCCCGGCCACGCCGATTATGTCAAGAACATGATCACTGGAGCTGCTCAGATGGACGGTGCGATTCTTGTGGTTTCTGGTGCTGATGGGCCAATGCCACAAACCAAAGAACACATCTTGCTGGCCAAGCAAGTGGGTGTGCCTAACATGGTTGTGTTCTTGAACAAACAAGACCAGGTTGATGATGAGGAGCTTCTGCAGCTTGTGGAATTGGAGGTGCGTGAGTTACTTTCTTCTTATGAGTTTCCTGGTGATGAAGTTCCTATTATTTCTGGGTCTGCTTTGTTAGCTTTGGAGGCTTTGATGGCCAAGCCTACTATCACTCGTGGTGAGAATGAATGGGTTGACAAGATTTATGAACTTATGGATTCTGTTGATAGCTATATTCCGATTCCTCAGCGCCAGACTGAGTTGCCATTTTTGTTAGCAATTGAAGATGTGTTTTCGATTACCGGTCGTGGGACTGTGGCCACTGGCCGTGTTGAGAGGGGTACTATTAAGGTTGGAGATACAGTGGACATTGTCGGTTTGAAGGACACAAGGAGCACCACTGTGACTGGTGTTGAAATGTTTCAGAAGATTCTTGATGATGCTATGGCTGGTGACAATGTGGGGTTGTTGCTTAGAGGGATACAAAAGATTGATATTCAGAGAGGGATGGTTTTGGCTAAGCCCGGGACGATTACCCCACATACCAAGTTTGAAGCAATTGTGTATGTGTTGAAGAAGGAAGAGGGTGGCAGGCATTCACCGTTTTTCTCAGGTTATAGGCCACAGTTTTACATGAGGACTACTGATGTCACTGGAAAGGTGACTTCCATAATGAATGATAAGGATGAAGAGTCCAAGATGGTCATGCCTGGCGACCGTGTCAAGATTGTTGTCGAGCTGATAGTTCCCGTGGCTTGTGAGCAAGGAATGAGGTTTGCTATCAGAGAAGGAGGGAAGACTGTTGGAGCTGGTGTTATTCAATCCATAATTGAGTGA

Protein Analysis

485

Amino Acids

52.6

Weight (kDa)

6.08

Isoelectric Point (pI)

35.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 288
AccII CGCG 1 cut(s) 396
AciI CCGC 2 cut(s) 208, 381
AcoI YGGCCR 6 cut(s) 280, 475, 591, 774, 936, 943
AcyI GRCGYC 1 cut(s) 378
AfaI GTAC 3 cut(s) 365, 434, 961
AfeI AGCGCT 1 cut(s) 352
AfiI CCNNNNNNNGG 1 cut(s) 927
AgeI ACCGGT 1 cut(s) 920
AgsI TTSAA 8 cut(s) 12, 631, 902, 1000, 1034, 1172, 1192, 1439
AjiI CACGTC 1 cut(s) 286
AjnI CCWGG 3 cut(s) 642, 715, 1327
AleI CACNNNNGTG 1 cut(s) 1019
Alw21I GWGCWC 1 cut(s) 1016
Alw26I GTCTC 1 cut(s) 431
Ama87I CYCGRG 2 cut(s) 231, 1142
Aor51HI AGCGCT 1 cut(s) 352
ApeKI GCWGC 8 cut(s) 17, 20, 23, 227, 314, 348, 512, 667
AsiGI ACCGGT 1 cut(s) 920
Asp700I GAANNNNTTC 1 cut(s) 1038
AspLEI GCGC 5 cut(s) 249, 353, 396, 398, 870
AspS9I GGNCC 1 cut(s) 557
AsuC2I CCSGG 3 cut(s) 474, 1143, 1144
AsuHPI GGTGA 8 cut(s) 72, 313, 400, 731, 809, 1082, 1209, 1291
AvaI CYCGRG 2 cut(s) 231, 1142
BalI TGGCCA 3 cut(s) 593, 776, 938
BauI CACGAG 2 cut(s) 399, 792
BbsI GAAGAC 1 cut(s) 1421
Bbv12I GWGCWC 1 cut(s) 1016
BbvCI CCTCAGC 2 cut(s) 28, 864
BbvI GCAGC 8 cut(s) 29, 32, 35, 214, 326, 360, 499, 679
BccI CCATC 7 cut(s) 132, 164, 514, 548, 766, 1120, 1312
BceAI ACGGC 2 cut(s) 310, 930
BciT130I CCWGG 3 cut(s) 644, 717, 1329
BciVI GTATCC 1 cut(s) 1092
BclI TGATCA 1 cut(s) 501
BcnI CCSGG 3 cut(s) 474, 1143, 1144
BcoDI GTCTC 1 cut(s) 431
BfmI CTRYAG 2 cut(s) 312, 665
BfoI RGCGCY 2 cut(s) 354, 871
BfuI GTATCC 1 cut(s) 1092
BisI GCNGC 9 cut(s) 18, 21, 24, 228, 315, 349, 381, 513, 668
BlpI GCTNAGC 1 cut(s) 1137
BlsI GCNGC 9 cut(s) 19, 22, 25, 229, 316, 350, 382, 514, 669
Bme1390I CCNGG 6 cut(s) 474, 644, 717, 1143, 1144, 1329
BmeT110I CYCGRG 2 cut(s) 231, 1142
BmgBI CACGTC 1 cut(s) 286
BmgT120I GGNCC 1 cut(s) 557
BmrFI CCNGG 6 cut(s) 474, 644, 717, 1143, 1144, 1329
BmsI GCATC 1 cut(s) 1048
BpiI GAAGAC 1 cut(s) 1421
BpmI CTGGAG 1 cut(s) 528
Bpu10I CCTNAGC 2 cut(s) 28, 864
Bpu1102I GCTNAGC 1 cut(s) 1137
BpuMI CCSGG 3 cut(s) 474, 1143, 1144
BsaHI GRCGYC 1 cut(s) 378
BsaJI CCNNGG 6 cut(s) 292, 324, 330, 472, 1142, 1368
BsaWI WCCGGW 1 cut(s) 920
BsaXI ACNNNNNCTCC 4 cut(s) 966, 996, 1416, 1446
Bsc4I CCNNNNNNNGG 1 cut(s) 927
Bse118I RCCGGY 2 cut(s) 82, 920
Bse1I ACTGG 4 cut(s) 511, 946, 1030, 1276
BseBI CCWGG 3 cut(s) 644, 717, 1329
BseDI CCNNGG 6 cut(s) 292, 324, 330, 472, 1142, 1368
BseGI GGATG 3 cut(s) 156, 1131, 1309
BseLI CCNNNNNNNGG 1 cut(s) 927
BseMII CTCAG 8 cut(s) 42, 77, 86, 432, 530, 867, 878, 1242
BseNI ACTGG 4 cut(s) 511, 946, 1030, 1276
BsePI GCGCGC 1 cut(s) 394
BseRI GAGGAG 3 cut(s) 79, 121, 671
BseXI GCAGC 8 cut(s) 29, 32, 35, 214, 326, 360, 499, 679
Bsh1236I CGCG 1 cut(s) 396
Bsh1285I CGRYCG 2 cut(s) 925, 1336
BshTI ACCGGT 1 cut(s) 920
BsiEI CGRYCG 2 cut(s) 925, 1336
BsiHKAI GWGCWC 1 cut(s) 1016
BsiHKCI CYCGRG 2 cut(s) 231, 1142
BsiSI CCGG 4 cut(s) 83, 474, 921, 1143
BslFI GGGAC 2 cut(s) 943, 1159
BslI CCNNNNNNNGG 1 cut(s) 927
BsmAI GTCTC 1 cut(s) 431
BsmFI GGGAC 2 cut(s) 943, 1159
BsmI GAATGC 1 cut(s) 1213
BsoBI CYCGRG 2 cut(s) 231, 1142
Bsp1286I GDGCHC 1 cut(s) 1016
Bsp143I GATC 1 cut(s) 501
Bsp1720I GCTNAGC 1 cut(s) 1137
Bsp19I CCATGG 1 cut(s) 324
BspACI CCGC 2 cut(s) 208, 381
BspCNI CTCAG 8 cut(s) 41, 76, 85, 433, 529, 868, 877, 1241
BspFNI CGCG 1 cut(s) 396
BspMAI CTGCAG 2 cut(s) 316, 669
BspQI GCTCTTC 1 cut(s) 384
BsrFI RCCGGY 2 cut(s) 82, 920
BsrI ACTGG 4 cut(s) 511, 946, 1030, 1276
BssAI RCCGGY 2 cut(s) 82, 920
BssECI CCNNGG 6 cut(s) 292, 324, 330, 472, 1142, 1368
BssHII GCGCGC 1 cut(s) 394
BssMI GATC 1 cut(s) 501
BssNI GRCGYC 1 cut(s) 378
BssSI CACGAG 2 cut(s) 399, 792
BssT1I CCWWGG 2 cut(s) 324, 330
Bst2BI CACGAG 2 cut(s) 399, 792
Bst2UI CCWGG 3 cut(s) 644, 717, 1329
Bst6I CTCTTC 5 cut(s) 115, 139, 384, 1194, 1302
BstACI GRCGYC 1 cut(s) 378
BstC8I GCNNGC 3 cut(s) 396, 591, 1211
BstDSI CCRYGG 3 cut(s) 292, 324, 1368
BstF5I GGATG 3 cut(s) 156, 1131, 1309
BstFNI CGCG 1 cut(s) 396
BstH2I RGCGCY 2 cut(s) 354, 871
BstHHI GCGC 5 cut(s) 249, 353, 396, 398, 870
BstKTI GATC 1 cut(s) 504
BstMAI GTCTC 1 cut(s) 431
BstMBI GATC 1 cut(s) 501
BstMCI CGRYCG 2 cut(s) 925, 1336
BstMWI GCNNNNNNNGC 9 cut(s) 23, 29, 253, 279, 595, 667, 755, 764, 773
BstNI CCWGG 3 cut(s) 644, 717, 1329
BstSCI CCNGG 6 cut(s) 472, 642, 715, 1141, 1142, 1327
BstSFI CTRYAG 2 cut(s) 312, 665
BstUI CGCG 1 cut(s) 396
BstV1I GCAGC 8 cut(s) 29, 32, 35, 214, 326, 360, 499, 679
BstV2I GAAGAC 1 cut(s) 1421
BstXI CCANNNNNNTGG 2 cut(s) 331, 601
BsuI GTATCC 1 cut(s) 1092
BtgI CCRYGG 3 cut(s) 292, 324, 1368
BtrI CACGTC 1 cut(s) 286
BtsCI GGATG 3 cut(s) 156, 1131, 1309
BtsI GCAGTG 2 cut(s) 309, 417
BtsIMutI CAGTG 7 cut(s) 309, 417, 504, 939, 987, 1017, 1269
Cac8I GCNNGC 3 cut(s) 396, 591, 1211
CfoI GCGC 5 cut(s) 249, 353, 396, 398, 870
Cfr10I RCCGGY 2 cut(s) 82, 920
Cfr13I GGNCC 1 cut(s) 557
Cfr9I CCCGGG 1 cut(s) 1142
CseI GACGC 1 cut(s) 386
CsiI ACCWGGT 1 cut(s) 642
Csp6I GTAC 3 cut(s) 364, 433, 960
CspAI ACCGGT 1 cut(s) 920
CviAII CATG 6 cut(s) 260, 325, 499, 616, 1252, 1324
CviQI GTAC 3 cut(s) 364, 433, 960
DpnI GATC 1 cut(s) 503
DpnII GATC 1 cut(s) 501
EaeI YGGCCR 6 cut(s) 280, 475, 591, 774, 936, 943
Eam1104I CTCTTC 5 cut(s) 115, 139, 384, 1194, 1302
EarI CTCTTC 5 cut(s) 115, 139, 384, 1194, 1302
Eco130I CCWWGG 2 cut(s) 324, 330
Eco47III AGCGCT 1 cut(s) 352
Eco88I CYCGRG 2 cut(s) 231, 1142
EcoRII CCWGG 3 cut(s) 642, 715, 1327
EcoT14I CCWWGG 2 cut(s) 324, 330
ErhI CCWWGG 2 cut(s) 324, 330
FaeI CATG 6 cut(s) 263, 328, 502, 619, 1255, 1327
FaqI GGGAC 2 cut(s) 943, 1159
FatI CATG 6 cut(s) 259, 324, 498, 615, 1251, 1323
FauNDI CATATG 1 cut(s) 55
FbaI TGATCA 1 cut(s) 501
FblI GTMKAC 1 cut(s) 288
Fnu4HI GCNGC 9 cut(s) 18, 21, 24, 228, 315, 349, 381, 513, 668
FokI GGATG 3 cut(s) 143, 1138, 1316
Fsp4HI GCNGC 9 cut(s) 18, 21, 24, 228, 315, 349, 381, 513, 668
GlaI GCGC 5 cut(s) 248, 352, 395, 397, 869
GluI GCNGC 9 cut(s) 18, 21, 24, 228, 315, 349, 381, 513, 668
GsuI CTGGAG 1 cut(s) 528
HaeII RGCGCY 2 cut(s) 354, 871
HapII CCGG 4 cut(s) 83, 474, 921, 1143
HgaI GACGC 1 cut(s) 386
HhaI GCGC 5 cut(s) 249, 353, 396, 398, 870
Hin1I GRCGYC 1 cut(s) 378
Hin1II CATG 6 cut(s) 263, 328, 502, 619, 1255, 1327
Hin6I GCGC 5 cut(s) 247, 351, 394, 396, 868
HinP1I GCGC 5 cut(s) 247, 351, 394, 396, 868
HincII GTYRAC 4 cut(s) 265, 289, 466, 814
HindII GTYRAC 4 cut(s) 265, 289, 466, 814
HinfI GANTC 7 cut(s) 405, 445, 532, 836, 859, 1048, 1310
HpaII CCGG 4 cut(s) 83, 474, 921, 1143
HphI GGTGA 8 cut(s) 72, 313, 400, 731, 809, 1082, 1209, 1291
Hpy166II GTNNAC 5 cut(s) 265, 289, 466, 814, 985
Hpy188I TCNGA 5 cut(s) 519, 858, 1044, 1119, 1403
Hpy188III TCNNGA 4 cut(s) 493, 628, 1052, 1342
Hpy8I GTNNAC 5 cut(s) 265, 289, 466, 814, 985
Hpy99I CGWCG 3 cut(s) 290, 371, 380
HpyAV CCTTC 4 cut(s) 148, 994, 1189, 1400
HpyCH4IV ACGT 2 cut(s) 285, 462
HpyCH4V TGCA 2 cut(s) 314, 667
HpyF10VI GCNNNNNNNGC 9 cut(s) 23, 29, 253, 279, 595, 667, 755, 764, 773
HpySE526I ACGT 2 cut(s) 285, 462
Hsp92I GRCGYC 1 cut(s) 378
Hsp92II CATG 6 cut(s) 263, 328, 502, 619, 1255, 1327
HspAI GCGC 5 cut(s) 247, 351, 394, 396, 868
Ksp22I TGATCA 1 cut(s) 501
Kzo9I GATC 1 cut(s) 501
LguI GCTCTTC 1 cut(s) 384
LmnI GCTCC 4 cut(s) 509, 658, 1011, 1424
Lsp1109I GCAGC 8 cut(s) 29, 32, 35, 214, 326, 360, 499, 679
LweI GCATC 1 cut(s) 1048
MabI ACCWGGT 1 cut(s) 642
MaeII ACGT 2 cut(s) 285, 462
MaeIII GTNAC 5 cut(s) 693, 1021, 1070, 1267, 1279
MalI GATC 1 cut(s) 503
MboI GATC 1 cut(s) 501
MfeI CAATTG 2 cut(s) 897, 1176
MhlI GDGCHC 1 cut(s) 1016
MlsI TGGCCA 3 cut(s) 593, 776, 938
MluCI AATT 5 cut(s) 6, 677, 897, 1176, 1446
MluNI TGGCCA 3 cut(s) 593, 776, 938
MlyI GAGTC 1 cut(s) 1319
MmeI TCCRAC 2 cut(s) 952, 1402
Mox20I TGGCCA 3 cut(s) 593, 776, 938
MroXI GAANNNNTTC 1 cut(s) 1038
MscI TGGCCA 3 cut(s) 593, 776, 938
MseI TTAA 2 cut(s) 414, 966
MslI CAYNNNNRTG 2 cut(s) 620, 1019
Msp20I TGGCCA 3 cut(s) 593, 776, 938
MspI CCGG 4 cut(s) 83, 474, 921, 1143
MspR9I CCNGG 6 cut(s) 474, 644, 717, 1143, 1144, 1329
MunI CAATTG 2 cut(s) 897, 1176
Mva1269I GAATGC 1 cut(s) 1213
MvaI CCWGG 3 cut(s) 644, 717, 1329
MvnI CGCG 1 cut(s) 396
MwoI GCNNNNNNNGC 9 cut(s) 23, 29, 253, 279, 595, 667, 755, 764, 773
NciI CCSGG 3 cut(s) 474, 1143, 1144
NcoI CCATGG 1 cut(s) 324
NdeI CATATG 1 cut(s) 55
NdeII GATC 1 cut(s) 501
NlaIII CATG 6 cut(s) 263, 328, 502, 619, 1255, 1327
NmuCI GTSAC 4 cut(s) 1021, 1070, 1267, 1279
OliI CACNNNNGTG 1 cut(s) 1019
PaeR7I CTCGAG 1 cut(s) 231
PauI GCGCGC 1 cut(s) 394
PciSI GCTCTTC 1 cut(s) 384
PcsI WCGNNNNNNNCGW 2 cut(s) 285, 372
PctI GAATGC 1 cut(s) 1213
PdmI GAANNNNTTC 1 cut(s) 1038
PfeI GAWTC 6 cut(s) 405, 445, 532, 836, 859, 1048
PflFI GACNNNGTC 2 cut(s) 989, 1337
PinAI ACCGGT 1 cut(s) 920
PkrI GCNGC 9 cut(s) 19, 22, 25, 229, 316, 350, 382, 514, 669
PleI GAGTC 1 cut(s) 1318
PpsI GAGTC 1 cut(s) 1318
Psp6I CCWGG 3 cut(s) 642, 715, 1327
PspGI CCWGG 3 cut(s) 642, 715, 1327
PspPI GGNCC 1 cut(s) 557
PspXI VCTCGAGB 1 cut(s) 231
PstI CTGCAG 2 cut(s) 316, 669
PsyI GACNNNGTC 2 cut(s) 989, 1337
PteI GCGCGC 1 cut(s) 394
RsaI GTAC 3 cut(s) 365, 434, 961
RsaNI GTAC 3 cut(s) 364, 433, 960
RseI CAYNNNNRTG 2 cut(s) 620, 1019
SalI GTCGAC 1 cut(s) 287
SapI GCTCTTC 1 cut(s) 384
SaqAI TTAA 2 cut(s) 414, 966
SatI GCNGC 9 cut(s) 18, 21, 24, 228, 315, 349, 381, 513, 668
Sau3AI GATC 1 cut(s) 501
Sau96I GGNCC 1 cut(s) 557
SchI GAGTC 1 cut(s) 1319
ScrFI CCNGG 6 cut(s) 474, 644, 717, 1143, 1144, 1329
SduI GDGCHC 1 cut(s) 1016
SexAI ACCWGGT 1 cut(s) 642
SfaNI GCATC 1 cut(s) 1048
SfcI CTRYAG 2 cut(s) 312, 665
Sfr274I CTCGAG 1 cut(s) 231
SlaI CTCGAG 1 cut(s) 231
SmaI CCCGGG 1 cut(s) 1144
SmiMI CAYNNNNRTG 2 cut(s) 620, 1019
SmlI CTYRAG 1 cut(s) 231
SmoI CTYRAG 1 cut(s) 231
Sse9I AATT 5 cut(s) 6, 677, 897, 1176, 1446
SsiI CCGC 2 cut(s) 208, 381
StyD4I CCNGG 6 cut(s) 472, 642, 715, 1141, 1142, 1327
StyI CCWWGG 2 cut(s) 324, 330
TaiI ACGT 2 cut(s) 288, 465
TaqI TCGA 7 cut(s) 232, 243, 288, 375, 429, 914, 1353
TasI AATT 5 cut(s) 6, 677, 897, 1176, 1446
TauI GCSGC 1 cut(s) 383
TfiI GAWTC 6 cut(s) 405, 445, 532, 836, 859, 1048
Tru1I TTAA 2 cut(s) 414, 966
Tru9I TTAA 2 cut(s) 414, 966
TscAI CASTG 7 cut(s) 316, 424, 511, 946, 987, 1024, 1276
TseFI GTSAC 4 cut(s) 1021, 1070, 1267, 1279
TseI GCWGC 8 cut(s) 17, 20, 23, 227, 314, 348, 512, 667
Tsp45I GTSAC 4 cut(s) 1021, 1070, 1267, 1279
TspDTI ATGAA 5 cut(s) 738, 819, 840, 1307, 1320
TspMI CCCGGG 1 cut(s) 1142
TspRI CASTG 7 cut(s) 316, 424, 511, 946, 987, 1024, 1276
Tth111I GACNNNGTC 2 cut(s) 989, 1337
XhoI CTCGAG 1 cut(s) 231
XmaI CCCGGG 1 cut(s) 1142
XmiI GTMKAC 1 cut(s) 288
XmnI GAANNNNTTC 1 cut(s) 1038
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.