Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0004416

Physical Location & Seq

Genomic Coordinates Forward (+)

69241007 .. 69243628

Gene Structure 2622 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0567600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2622 bp

ATGAGGAAGCTAGTTGATACACCAACCAATTTCAAGATACAGTTGCCAAATACCAACATGAAACCAACTATCGCTCCTCTGTACCTTTCCTTGTTTCTTCACATCCTCACCCTACTTGTATCCTGTGATCCACCACCTATCTACACTCCGGTGGAAGATATCACCCTCAACTGTGGCTATTCCGGTAGCTTACAGGATTTCTATAGTAACCGAAATTGGACTGGAGATATCAACTCAAAGTTGTCCCCCATAGAAGCTGGTAACACTACCTCCCAAGTCAAAGAAGCACCACCTTCCTCCTCCTCAGCTAGCCAAGTACCATACACCACAGCACGGTTATCTCGTTACAAATTTACGTACCGATTTGACATCCTCACTGCTGGCCAGAAGTTCATTCGGTTGTATTTCAACCCAGCTTCGTACCCAAACTTCGAGCGCTCCAAAGCTCTCTTCTCCGTCAAAGTTGGTCCATATACGCTTCTCAATGACTTCAATGCTTCAGCTACTGTGGATGCTAATTCGGTGGAGACTCTATATAGAGAATTCTGCTTAAACGTTGACGATGAAGGAGAGAGTATTAACATCACGTTCACTCCAAGCACCAAAGCCAAAGGTGCACACGCATTTATCAACGGAATTGAAATCGTTTCGATGCCAACCAATCTTTACTACTCAGCAGCACAGAGCATGGGGGTGAAATATCTGAGCAACAAAGTGAACTATTACATTGAAAACAGCACTGCAATGGAGACGGTCTACCGAATCAACGTCGGTGGAATGGCCATCTCGCCGGAGGCAGACACCGGAATGTACCGGACCTGGGAAACTGCTGATGAAACTTATTTGGATAATATAAGTAGAGAATTCAGCGTGCTACCACAGAACAATACCATTGAACTTAGTTTTGAAGCGGTGCCGGAATACTCTGCCCCAAAAGCAGTTTACATAACAGGTCGGTCAATGGGGATGAACAAAACCATCAACAAGAGCTACAATCTCACCTGGGCATTTCCAATAGATCCTAACTTCTTCTACCTGGTTAGGCTGCATTTTTGTGAGTTTGAGTCTGATATTACTCATTATGGGGACAGATCATTTCTAATCTACATGGCCAATATAACCACAGAAGAAGTAGCCGACGTAATAGGATGGAGCGGTGGGAACGGGAATCCCGTATACAGGGACTATTATGTATACATGACTAGCCCTGTGAACTCAAACAAAGTAAATCTCTTTGTTGCACTTCAAGCAAGCCCTTACGATTGGCTTACTACATACAACGATGCCATCTTAAACGGGCTCGAGATCTTCAAACTAAACAACTCAAATGGTAATTTAGCCGGGCCGAACCCATCTCCACCACCAAAGGCGATGCAGTCAAGCCCCAACAAGCCCAACAAGAAGTCGACTCATATGCTTGCCATTGCGGTCAGCGTAGTTTCTTGCATACTACTGGTACTTTTTCTCTCTTTGCTCGGGTTTTTAGTCTTTAGAGGAGGCCATTGGGAAGTGAAAGACTTTGGCTCTAGCTACCGAATAGAAAACTCATTACTACCGTCCGATTTGTGCCATTACTTTTCACTGACGGAGATCAAGGCTGCCACCAAAAACTTCGATGATAGTTTTATTATTGGAGTTGGCGGGTTTGGCCACGTGTACAAAGGACACTTTGATGATGGGGCCACCCTTGTTGCAATCAAACGGCTCAAAGCCACATCATCACAGGGCGCTCATGAGTTCATGACAGAAATCAAGATGCTCTCTGGACTGCGCCACCACCATTTGGTGTCTTTGATTGGATATTGTGCCGATCAAGGTGAGATGGTCCTAGTGTACGATTACATGCCACGTGGGACCCTTAGTGATCATTTGCACCACACCGAGAAACCCCATCTTCCTTGGGAACAAAGACTACGAATTTGTATTGGTGCAGCGCAAGGTTTGCACTACCTTCACACAGGTACCAAAGGCACCATCATTCACCGTGACATAAAGAGCAAAAACATATTATTAGACGAGAAATGGGTAGCCAAGGTTTCGGATTTTGGGTTGTCAAAAATGGGCAATATCACAATGTCCAAGACCCACATTAGTACGAAGGTGAAGGGTAGTTTCGGATATCTTGACCCTGATTACTACCGGCGTCAACAATTGACTGAGAAGTCCGACGTGTACTCATTTGGGGTAGTGTTATGCGAAGTATTGTGTGGAAGGCCAGCTGTGACCAGCGTGGATAATAATCGAGTTGGCCTGGCTGGATGGGCCAAAAAGTGTCATCGCGATGGGAAACTTGATCAGATTGTTGACCCAAATTTGAAGGGTGAAATTGCAGTCCGATGCTTGCATAAGTTTGCTTCCATTGCAATGAGTTGCATGGATGATAATGGGATCAATCGGCCGTCAATGGATGATGTTGTGAGAGGGCTTCAGTTTGCATTGCAGATGCAGGAAAACAATGAGGATTATATTGATCACATTGAAAGGACGGTTCAATATAAGATTTCATTGAACAAGGACAACGAAGGGTCTTGTTCTAGTGAGCAAAGCAGTGGGGCGAAGGAATCCATCCAAGAGTTGACTGGGACAATTTTCTCCGAGATCATTGATCCGGTTGGAAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GTP_EFTU GTP_EFTU_D2 GTP_EFTU_D3

Protein Analysis

873

Amino Acids

97.6

Weight (kDa)

6.26

Isoelectric Point (pI)

42.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	56 - 438	2e-25	Malectin-like domain
Pkinase	PF00069	543 - 806	2.2e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	544 - 807	7.9e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004416)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G20360 AT4G20360
fragaria_vesca	FvH4_5g06350 FvH4_6g51880
malus_domestica	MD06G1165400.v1.1 MD09G1022300.v1.1 MD14G1170900.v1.1
prunus_persica	Prupe.3G294300_v2.0.a1 Prupe.5G165000_v2.0.a1 Prupe.5G165000_v2.0.a1
pyrus_communis	pycom06g14780 pycom111g01870 pycom14g14280
rosa_chinensis	RchiOBHm_Chr2g0173371 RchiOBHm_Chr7g0192491
rosa_laevigata	RLG00000004361 RLG00000022183
rosa_multiflora	Rmu_sc0003108.1_g000029 Rmu_sc0014554.1_g000001
rosa_roxburghii	Rroxscaffold_2G00078950 Rroxscaffold_3G00262980
rosa_rugosa	Rorug02G0567600 Rorug07G0001900
rosa_samantha	Rh2AG648100 Rh2BG658700 Rh2DG674100 Rh7AG125900 Rh7BG128200 Rh7CG129800 Rh7DG129700
rosa_wichuraiana	Rw2G053200 Rw7G010840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2161
Acc65I	GGTACC	1 cut(s)	1961
AccB1I	GGYRCC	3 cut(s)	913, 1961, 1970
AccB7I	CCANNNNNTGG	1 cut(s)	1783
AccBSI	CCGCTC	1 cut(s)	1155
AccI	GTMKAC	4 cut(s)	756, 1176, 1194, 1406
AccII	CGCG	1 cut(s)	2280
AciI	CCGC	4 cut(s)	911, 1155, 1427, 1641
AclI	AACGTT	1 cut(s)	555
AclWI	GGATC	4 cut(s)	122, 1013, 2396, 2600
AcoI	YGGCCR	5 cut(s)	382, 780, 1110, 1648, 2396
AcsI	RAATTY	5 cut(s)	350, 542, 863, 1917, 2311
AcuI	CTGAAG	2 cut(s)	483, 2411
AcvI	CACGTG	2 cut(s)	1654, 1850
AcyI	GRCGYC	1 cut(s)	2143
AfeI	AGCGCT	1 cut(s)	437
AfiI	CCNNNNNNNGG	4 cut(s)	333, 820, 1179, 1783
AflIII	ACRYGT	2 cut(s)	1653, 2169
AjiI	CACGTC	1 cut(s)	2170
AjnI	CCWGG	4 cut(s)	818, 1001, 1035, 2250
AjuI	GAANNNNNNNTTGG	2 cut(s)	434, 466
AleI	CACNNNNGTG	1 cut(s)	149
Alw21I	GWGCWC	1 cut(s)	619
Alw26I	GTCTC	2 cut(s)	521, 743
Alw44I	GTGCAC	1 cut(s)	615
AlwI	GGATC	4 cut(s)	122, 1013, 2396, 2600
AlwNI	CAGNNNCTG	1 cut(s)	506
Ama87I	CYCGRG	2 cut(s)	1301, 1475
Aor51HI	AGCGCT	1 cut(s)	437
ApaLI	GTGCAC	1 cut(s)	615
ApeKI	GCWGC	4 cut(s)	677, 1045, 1598, 1931
ApoI	RAATTY	5 cut(s)	350, 542, 863, 1917, 2311
ArsI	GACNNNNNNTTYG	2 cut(s)	1902, 1934
Asp718I	GGTACC	1 cut(s)	1961
AspLEI	GCGC	4 cut(s)	438, 1730, 1773, 1936
AspS9I	GGNCC	7 cut(s)	467, 816, 1343, 1680, 1825, 1854, 2262
AsuC2I	CCSGG	1 cut(s)	1342
AsuHPI	GGTGA	8 cut(s)	100, 154, 706, 991, 1829, 1973, 2113, 2333
AsuNHI	GCTAGC	1 cut(s)	308
AvaI	CYCGRG	2 cut(s)	1301, 1475
AvaII	GGWCC	4 cut(s)	467, 816, 1825, 1854
BaeGI	GKGCMC	1 cut(s)	619
BaeI	ACNNNNGTAYC	2 cut(s)	1945, 1978
BalI	TGGCCA	4 cut(s)	384, 782, 1112, 1650
BanI	GGYRCC	3 cut(s)	913, 1961, 1970
BanII	GRGCYC	1 cut(s)	1302
BarI	GAAGNNNNNNTAC	2 cut(s)	413, 445
BbrPI	CACGTG	2 cut(s)	1654, 1850
Bbv12I	GWGCWC	1 cut(s)	619
BbvCI	CCTCAGC	1 cut(s)	304
BbvI	GCAGC	4 cut(s)	689, 1032, 1585, 1943
BceAI	ACGGC	2 cut(s)	1718, 2383
BcgI	CGANNNNNNTGC	2 cut(s)	1396, 1430
BciT130I	CCWGG	4 cut(s)	820, 1003, 1037, 2252
BciVI	GTATCC	1 cut(s)	130
BclI	TGATCA	3 cut(s)	1864, 2293, 2470
BcnI	CCSGG	1 cut(s)	1342
BcoDI	GTCTC	2 cut(s)	521, 743
BfaI	CTAG	6 cut(s)	11, 309, 1203, 1527, 1829, 2535
BfmI	CTRYAG	1 cut(s)	202
BfoI	RGCGCY	2 cut(s)	439, 1731
BfuI	GTATCC	1 cut(s)	130
BglII	AGATCT	1 cut(s)	1305
BisI	GCNGC	4 cut(s)	678, 1046, 1599, 1932
BlsI	GCNGC	4 cut(s)	679, 1047, 1600, 1933
Bme1390I	CCNGG	5 cut(s)	820, 1003, 1037, 1342, 2252
Bme18I	GGWCC	4 cut(s)	467, 816, 1825, 1854
BmeT110I	CYCGRG	2 cut(s)	1301, 1475
BmgBI	CACGTC	1 cut(s)	2170
BmgT120I	GGNCC	7 cut(s)	467, 816, 1343, 1680, 1825, 1854, 2262
BmiI	GGNNCC	6 cut(s)	915, 1681, 1855, 1856, 1963, 1972
BmrFI	CCNGG	5 cut(s)	820, 1003, 1037, 1342, 2252
BmrI	ACTGGG	1 cut(s)	2589
BmsI	GCATC	7 cut(s)	502, 642, 1273, 1362, 1746, 2327, 2433
BmtI	GCTAGC	1 cut(s)	312
BmuI	ACTGGG	1 cut(s)	2589
BpmI	CTGGAG	1 cut(s)	243
Bpu10I	CCTNAGC	1 cut(s)	304
BpuMI	CCSGG	1 cut(s)	1342
BsaAI	YACGTR	3 cut(s)	357, 1654, 1850
BsaBI	GATNNNNATC	1 cut(s)	2238
BsaHI	GRCGYC	1 cut(s)	2143
BsaJI	CCNNGG	4 cut(s)	819, 1002, 1898, 2031
BsaWI	WCCGGW	5 cut(s)	148, 182, 803, 813, 2608
BsaXI	ACNNNNNCTCC	6 cut(s)	58, 88, 254, 284, 577, 607
Bsc4I	CCNNNNNNNGG	4 cut(s)	333, 820, 1179, 1783
Bse118I	RCCGGY	1 cut(s)	2139
Bse1I	ACTGG	3 cut(s)	226, 1458, 2584
Bse3DI	GCAATG	5 cut(s)	750, 1422, 2358, 2370, 2435
Bse8I	GATNNNNATC	1 cut(s)	2238
BseBI	CCWGG	4 cut(s)	820, 1003, 1037, 2252
BseDI	CCNNGG	4 cut(s)	819, 1002, 1898, 2031
BseGI	GGATG	9 cut(s)	102, 369, 517, 972, 1154, 2264, 2383, 2413, 2565
BseJI	GATNNNNATC	1 cut(s)	2238
BseLI	CCNNNNNNNGG	4 cut(s)	333, 820, 1179, 1783
BseMI	GCAATG	5 cut(s)	750, 1422, 2358, 2370, 2435
BseMII	CTCAG	4 cut(s)	318, 687, 695, 2148
BseNI	ACTGG	3 cut(s)	226, 1458, 2584
BseRI	GAGGAG	4 cut(s)	66, 289, 292, 1509
BseSI	GKGCMC	1 cut(s)	619
BseX3I	CGGCCG	1 cut(s)	2396
BseXI	GCAGC	4 cut(s)	689, 1032, 1585, 1943
BseYI	CCCAGC	1 cut(s)	412
BsgI	GTGCAG	1 cut(s)	1950
Bsh1236I	CGCG	1 cut(s)	2280
Bsh1285I	CGRYCG	1 cut(s)	2399
BshNI	GGYRCC	3 cut(s)	913, 1961, 1970
BsiEI	CGRYCG	1 cut(s)	2399
BsiHKAI	GWGCWC	1 cut(s)	619
BsiHKCI	CYCGRG	2 cut(s)	1301, 1475
BsiSI	CCGG	9 cut(s)	149, 183, 791, 804, 814, 917, 1341, 2140, 2609
BslFI	GGGAC	5 cut(s)	229, 1100, 1196, 1867, 2596
BslI	CCNNNNNNNGG	4 cut(s)	333, 820, 1179, 1783
BsmAI	GTCTC	2 cut(s)	521, 743
BsmBI	CGTCTC	1 cut(s)	743
BsmFI	GGGAC	5 cut(s)	229, 1100, 1196, 1867, 2596
BsoBI	CYCGRG	2 cut(s)	1301, 1475
Bsp1286I	GDGCHC	2 cut(s)	619, 1302
Bsp1407I	TGTACA	1 cut(s)	1656
Bsp68I	TCGCGA	1 cut(s)	2280
BspACI	CCGC	4 cut(s)	911, 1155, 1427, 1641
BspCNI	CTCAG	4 cut(s)	317, 686, 696, 2149
BspFNI	CGCG	1 cut(s)	2280
BspHI	TCATGA	2 cut(s)	1732, 1740
BspLI	GGNNCC	6 cut(s)	915, 1681, 1855, 1856, 1963, 1972
BspOI	GCTAGC	1 cut(s)	312
BspPI	GGATC	4 cut(s)	122, 1013, 2396, 2600
BspT107I	GGYRCC	3 cut(s)	913, 1961, 1970
BsrBI	CCGCTC	1 cut(s)	1155
BsrDI	GCAATG	5 cut(s)	750, 1422, 2358, 2370, 2435
BsrFI	RCCGGY	1 cut(s)	2139
BsrGI	TGTACA	1 cut(s)	1656
BsrI	ACTGG	3 cut(s)	226, 1458, 2584
BssAI	RCCGGY	1 cut(s)	2139
BssECI	CCNNGG	4 cut(s)	819, 1002, 1898, 2031
BssNAI	GTATAC	2 cut(s)	1177, 1195
BssNI	GRCGYC	1 cut(s)	2143
BssT1I	CCWWGG	2 cut(s)	1898, 2031
Bst1107I	GTATAC	2 cut(s)	1177, 1195
Bst2UI	CCWGG	4 cut(s)	820, 1003, 1037, 2252
Bst4CI	ACNGT	8 cut(s)	42, 173, 336, 508, 754, 1557, 1985, 2488
Bst6I	CTCTTC	1 cut(s)	455
BstACI	GRCGYC	1 cut(s)	2143
BstAPI	GCANNNNNTGC	1 cut(s)	1942
BstAUI	TGTACA	1 cut(s)	1656
BstBAI	YACGTR	3 cut(s)	357, 1654, 1850
BstC8I	GCNNGC	7 cut(s)	310, 382, 872, 1252, 1419, 2217, 2342
BstDEI	CTNAG	6 cut(s)	304, 673, 704, 899, 1859, 2157
BstF5I	GGATG	9 cut(s)	102, 369, 517, 972, 1154, 2264, 2383, 2413, 2565
BstFNI	CGCG	1 cut(s)	2280
BstH2I	RGCGCY	2 cut(s)	439, 1731
BstHHI	GCGC	4 cut(s)	438, 1730, 1773, 1936
BstMAI	GTCTC	2 cut(s)	521, 743
BstMCI	CGRYCG	1 cut(s)	2399
BstMWI	GCNNNNNNNGC	7 cut(s)	614, 935, 1247, 1647, 1942, 2261, 2360
BstNI	CCWGG	4 cut(s)	820, 1003, 1037, 2252
BstNSI	RCATGY	1 cut(s)	1846
BstSCI	CCNGG	5 cut(s)	818, 1001, 1035, 1340, 2250
BstSFI	CTRYAG	1 cut(s)	202
BstSLI	GKGCMC	1 cut(s)	619
BstSNI	TACGTA	1 cut(s)	357
BstUI	CGCG	1 cut(s)	2280
BstV1I	GCAGC	4 cut(s)	689, 1032, 1585, 1943
BstX2I	RGATCY	2 cut(s)	1018, 1305
BstYI	RGATCY	2 cut(s)	1018, 1305
BstZ17I	GTATAC	2 cut(s)	1177, 1195
BstZI	CGGCCG	1 cut(s)	2396
BsuI	GTATCC	1 cut(s)	130
BtgZI	GCGATG	3 cut(s)	1385, 2261, 2295
BtrI	CACGTC	1 cut(s)	2170
BtsCI	GGATG	9 cut(s)	102, 369, 517, 972, 1154, 2264, 2383, 2413, 2565
BtsI	GCAGTG	3 cut(s)	375, 738, 2554
BtsIMutI	CAGTG	4 cut(s)	375, 738, 1580, 2554
BtuMI	TCGCGA	1 cut(s)	2280
Cac8I	GCNNGC	7 cut(s)	310, 382, 872, 1252, 1419, 2217, 2342
CaiI	CAGNNNCTG	1 cut(s)	506
CciI	TCATGA	2 cut(s)	1732, 1740
CfoI	GCGC	4 cut(s)	438, 1730, 1773, 1936
Cfr10I	RCCGGY	1 cut(s)	2139
Cfr13I	GGNCC	7 cut(s)	467, 816, 1343, 1680, 1825, 1854, 2262
CseI	GACGC	1 cut(s)	2132
CsiI	ACCWGGT	1 cut(s)	1035
CspCI	CAANNNNNGTGG	4 cut(s)	754, 789, 1672, 1707
CviAII	CATG	8 cut(s)	58, 688, 1108, 1198, 1733, 1741, 1843, 2374
DdeI	CTNAG	6 cut(s)	304, 673, 704, 899, 1859, 2157
DrdI	GACNNNNNNGTC	1 cut(s)	2161
DseDI	GACNNNNNNGTC	1 cut(s)	2161
EaeI	YGGCCR	5 cut(s)	382, 780, 1110, 1648, 2396
EagI	CGGCCG	1 cut(s)	2396
Eam1104I	CTCTTC	1 cut(s)	455
EarI	CTCTTC	1 cut(s)	455
EclXI	CGGCCG	1 cut(s)	2396
Eco105I	TACGTA	1 cut(s)	357
Eco130I	CCWWGG	2 cut(s)	1898, 2031
Eco24I	GRGCYC	1 cut(s)	1302
Eco32I	GATATC	3 cut(s)	160, 229, 2120
Eco47I	GGWCC	4 cut(s)	467, 816, 1825, 1854
Eco47III	AGCGCT	1 cut(s)	437
Eco52I	CGGCCG	1 cut(s)	2396
Eco57I	CTGAAG	2 cut(s)	483, 2411
Eco72I	CACGTG	2 cut(s)	1654, 1850
Eco88I	CYCGRG	2 cut(s)	1301, 1475
EcoO109I	RGGNCCY	1 cut(s)	1854
EcoRI	GAATTC	2 cut(s)	542, 863
EcoRII	CCWGG	4 cut(s)	818, 1001, 1035, 2250
EcoRV	GATATC	3 cut(s)	160, 229, 2120
EcoT14I	CCWWGG	2 cut(s)	1898, 2031
EcoT38I	GRGCYC	1 cut(s)	1302
ErhI	CCWWGG	2 cut(s)	1898, 2031
Esp3I	CGTCTC	1 cut(s)	743
FaeI	CATG	8 cut(s)	61, 691, 1111, 1201, 1736, 1744, 1846, 2377
FaqI	GGGAC	5 cut(s)	229, 1100, 1196, 1867, 2596
FatI	CATG	8 cut(s)	57, 687, 1107, 1197, 1732, 1740, 1842, 2373
FauI	CCCGC	1 cut(s)	1634
FauNDI	CATATG	1 cut(s)	1413
FbaI	TGATCA	3 cut(s)	1864, 2293, 2470
FblI	GTMKAC	4 cut(s)	756, 1176, 1194, 1406
Fnu4HI	GCNGC	4 cut(s)	678, 1046, 1599, 1932
FokI	GGATG	9 cut(s)	89, 356, 524, 979, 1161, 2271, 2390, 2420, 2552
FriOI	GRGCYC	1 cut(s)	1302
Fsp4HI	GCNGC	4 cut(s)	678, 1046, 1599, 1932
FspBI	CTAG	6 cut(s)	11, 309, 1203, 1527, 1829, 2535
GlaI	GCGC	4 cut(s)	437, 1729, 1772, 1935
GluI	GCNGC	4 cut(s)	678, 1046, 1599, 1932
GsaI	CCCAGC	1 cut(s)	416
GsuI	CTGGAG	1 cut(s)	243
HaeII	RGCGCY	2 cut(s)	439, 1731
HapII	CCGG	9 cut(s)	149, 183, 791, 804, 814, 917, 1341, 2140, 2609
HgaI	GACGC	1 cut(s)	2132
HhaI	GCGC	4 cut(s)	438, 1730, 1773, 1936
Hin1I	GRCGYC	1 cut(s)	2143
Hin1II	CATG	8 cut(s)	61, 691, 1111, 1201, 1736, 1744, 1846, 2377
Hin6I	GCGC	4 cut(s)	436, 1728, 1771, 1934
HinP1I	GCGC	4 cut(s)	436, 1728, 1771, 1934
HincII	GTYRAC	5 cut(s)	559, 1407, 2147, 2305, 2577
HindII	GTYRAC	5 cut(s)	559, 1407, 2147, 2305, 2577
HinfI	GANTC	6 cut(s)	529, 762, 1064, 1168, 1408, 2561
HpaII	CCGG	9 cut(s)	149, 183, 791, 804, 814, 917, 1341, 2140, 2609
HphI	GGTGA	8 cut(s)	100, 154, 706, 991, 1829, 1973, 2113, 2333
Hpy188I	TCNGA	9 cut(s)	705, 1069, 1561, 2041, 2117, 2167, 2298, 2336, 2596
Hpy188III	TCNNGA	8 cut(s)	34, 1303, 1733, 1741, 1753, 1764, 2123, 2279
Hpy99I	CGWCG	3 cut(s)	773, 1142, 2171
HpyAV	CCTTC	9 cut(s)	303, 560, 1961, 2092, 2098, 2205, 2311, 2516, 2551
HpyCH4III	ACNGT	8 cut(s)	42, 173, 336, 508, 754, 1557, 1985, 2488
HpyCH4IV	ACGT	8 cut(s)	356, 555, 587, 768, 1140, 1653, 1849, 2169
HpyF10VI	GCNNNNNNNGC	7 cut(s)	614, 935, 1247, 1647, 1942, 2261, 2360
HpyF3I	CTNAG	6 cut(s)	304, 673, 704, 899, 1859, 2157
HpySE526I	ACGT	8 cut(s)	356, 555, 587, 768, 1140, 1653, 1849, 2169
Hsp92I	GRCGYC	1 cut(s)	2143
Hsp92II	CATG	8 cut(s)	61, 691, 1111, 1201, 1736, 1744, 1846, 2377
HspAI	GCGC	4 cut(s)	436, 1728, 1771, 1934
KflI	GGGWCCC	1 cut(s)	1854
KpnI	GGTACC	1 cut(s)	1965
Ksp22I	TGATCA	3 cut(s)	1864, 2293, 2470
LmnI	GCTCC	3 cut(s)	79, 443, 1152
Lsp1109I	GCAGC	4 cut(s)	689, 1032, 1585, 1943
LweI	GCATC	7 cut(s)	502, 642, 1273, 1362, 1746, 2327, 2433
MabI	ACCWGGT	1 cut(s)	1035
MaeI	CTAG	6 cut(s)	11, 309, 1203, 1527, 1829, 2535
MaeII	ACGT	8 cut(s)	356, 555, 587, 768, 1140, 1653, 1849, 2169
MaeIII	GTNAC	5 cut(s)	206, 260, 344, 1985, 2221
MbiI	CCGCTC	1 cut(s)	1155
MboII	GAAGA	7 cut(s)	89, 167, 442, 1021, 1139, 1300, 1886
MfeI	CAATTG	1 cut(s)	2150
MflI	RGATCY	2 cut(s)	1018, 1305
MhlI	GDGCHC	2 cut(s)	619, 1302
MlsI	TGGCCA	4 cut(s)	384, 782, 1112, 1650
MluNI	TGGCCA	4 cut(s)	384, 782, 1112, 1650
MlyI	GAGTC	3 cut(s)	523, 1073, 1402
MmeI	TCCRAC	2 cut(s)	2190, 2593
Mox20I	TGGCCA	4 cut(s)	384, 782, 1112, 1650
MscI	TGGCCA	4 cut(s)	384, 782, 1112, 1650
MseI	TTAA	3 cut(s)	551, 579, 1292
MslI	CAYNNNNRTG	8 cut(s)	149, 692, 743, 806, 1053, 1671, 2280, 2363
Msp20I	TGGCCA	4 cut(s)	384, 782, 1112, 1650
MspA1I	CMGCKG	1 cut(s)	2219
MspI	CCGG	9 cut(s)	149, 183, 791, 804, 814, 917, 1341, 2140, 2609
MspR9I	CCNGG	5 cut(s)	820, 1003, 1037, 1342, 2252
MunI	CAATTG	1 cut(s)	2150
MvaI	CCWGG	4 cut(s)	820, 1003, 1037, 2252
MvnI	CGCG	1 cut(s)	2280
MwoI	GCNNNNNNNGC	7 cut(s)	614, 935, 1247, 1647, 1942, 2261, 2360
NciI	CCSGG	1 cut(s)	1342
NdeI	CATATG	1 cut(s)	1413
NheI	GCTAGC	1 cut(s)	308
NlaIII	CATG	8 cut(s)	61, 691, 1111, 1201, 1736, 1744, 1846, 2377
NlaIV	GGNNCC	6 cut(s)	915, 1681, 1855, 1856, 1963, 1972
NmuCI	GTSAC	2 cut(s)	1985, 2221
NruI	TCGCGA	1 cut(s)	2280
NspI	RCATGY	1 cut(s)	1846
OliI	CACNNNNGTG	1 cut(s)	149
PaeR7I	CTCGAG	1 cut(s)	1301
PagI	TCATGA	2 cut(s)	1732, 1740
PcsI	WCGNNNNNNNCGW	2 cut(s)	340, 1170
PfeI	GAWTC	3 cut(s)	762, 1168, 2561
PflMI	CCANNNNNTGG	1 cut(s)	1783
PkrI	GCNGC	4 cut(s)	679, 1047, 1600, 1933
PleI	GAGTC	3 cut(s)	523, 1072, 1402
PmaCI	CACGTG	2 cut(s)	1654, 1850
PmlI	CACGTG	2 cut(s)	1654, 1850
PpsI	GAGTC	3 cut(s)	523, 1072, 1402
Ppu21I	YACGTR	3 cut(s)	357, 1654, 1850
PpuMI	RGGWCCY	1 cut(s)	1854
Psp1406I	AACGTT	1 cut(s)	555
Psp5II	RGGWCCY	1 cut(s)	1854
Psp6I	CCWGG	4 cut(s)	818, 1001, 1035, 2250
PspCI	CACGTG	2 cut(s)	1654, 1850
PspFI	CCCAGC	1 cut(s)	412
PspGI	CCWGG	4 cut(s)	818, 1001, 1035, 2250
PspN4I	GGNNCC	6 cut(s)	915, 1681, 1855, 1856, 1963, 1972
PspPI	GGNCC	7 cut(s)	467, 816, 1343, 1680, 1825, 1854, 2262
PspPPI	RGGWCCY	1 cut(s)	1854
PsrI	GAACNNNNNNTAC	2 cut(s)	1896, 1928
PstNI	CAGNNNCTG	1 cut(s)	506
PsuI	RGATCY	2 cut(s)	1018, 1305
PvuII	CAGCTG	1 cut(s)	2219
RruI	TCGCGA	1 cut(s)	2280
RseI	CAYNNNNRTG	8 cut(s)	149, 692, 743, 806, 1053, 1671, 2280, 2363
SalI	GTCGAC	1 cut(s)	1405
SaqAI	TTAA	3 cut(s)	551, 579, 1292
SatI	GCNGC	4 cut(s)	678, 1046, 1599, 1932
Sau96I	GGNCC	7 cut(s)	467, 816, 1343, 1680, 1825, 1854, 2262
SchI	GAGTC	3 cut(s)	523, 1073, 1402
ScrFI	CCNGG	5 cut(s)	820, 1003, 1037, 1342, 2252
SduI	GDGCHC	2 cut(s)	619, 1302
SexAI	ACCWGGT	1 cut(s)	1035
SfaNI	GCATC	7 cut(s)	502, 642, 1273, 1362, 1746, 2327, 2433
SfcI	CTRYAG	1 cut(s)	202
Sfr274I	CTCGAG	1 cut(s)	1301
SinI	GGWCC	4 cut(s)	467, 816, 1825, 1854
SlaI	CTCGAG	1 cut(s)	1301
SmiMI	CAYNNNNRTG	8 cut(s)	149, 692, 743, 806, 1053, 1671, 2280, 2363
SmlI	CTYRAG	1 cut(s)	1301
SmoI	CTYRAG	1 cut(s)	1301
SnaBI	TACGTA	1 cut(s)	357
SsiI	CCGC	4 cut(s)	911, 1155, 1427, 1641
SspMI	CTAG	6 cut(s)	11, 309, 1203, 1527, 1829, 2535
StyD4I	CCNGG	5 cut(s)	818, 1001, 1035, 1340, 2250
StyI	CCWWGG	2 cut(s)	1898, 2031
TaaI	ACNGT	8 cut(s)	42, 173, 336, 508, 754, 1557, 1985, 2488
TaiI	ACGT	8 cut(s)	359, 558, 590, 771, 1143, 1656, 1852, 2172
TaqI	TCGA	6 cut(s)	432, 650, 1302, 1406, 1614, 2242
TaqII	GACCGA	1 cut(s)	945
TatI	WGTACW	2 cut(s)	1656, 2172
TfiI	GAWTC	3 cut(s)	762, 1168, 2561
Tru1I	TTAA	3 cut(s)	551, 579, 1292
Tru9I	TTAA	3 cut(s)	551, 579, 1292
TscAI	CASTG	4 cut(s)	382, 745, 1587, 2554
TseFI	GTSAC	2 cut(s)	1985, 2221
TseI	GCWGC	4 cut(s)	677, 1045, 1598, 1931
Tsp45I	GTSAC	2 cut(s)	1985, 2221
TspDTI	ATGAA	7 cut(s)	74, 382, 579, 849, 983, 1729, 2493
TspGWI	ACGGA	3 cut(s)	445, 648, 1601
TspRI	CASTG	4 cut(s)	382, 745, 1587, 2554
Van91I	CCANNNNNTGG	1 cut(s)	1783
VneI	GTGCAC	1 cut(s)	615
VpaK11BI	GGWCC	4 cut(s)	467, 816, 1825, 1854
XapI	RAATTY	5 cut(s)	350, 542, 863, 1917, 2311
XceI	RCATGY	1 cut(s)	1846
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2576
XhoI	CTCGAG	1 cut(s)	1301
XmiI	GTMKAC	4 cut(s)	756, 1176, 1194, 1406
XspI	CTAG	6 cut(s)	11, 309, 1203, 1527, 1829, 2535

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.