Rmu_sc0014554.1_g000001

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0014554.1
Physical Location & Seq
Reverse (-)
7462 .. 8950
1489 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0014554.1_g000001.1.cds

Sequence Viewer

Length: 1236 bp
atggcttctgctatcggagccccaccctcttcaaaactcctcttcactccctcacccaccacaccctcactttctcatcccacccacctttctctctctacacccaaagccctagcatcaaagcccctctcctcctcctccgcctccgccgccgccttcgatgtcgtcgtcgtctccccctcgctccggaggcgccgatccttcaccgtccggatggcgcgtggcaagttcgagcggaagaagccccacgtcaacatcggcaccatcggccacgtcgaccacggcaagaccaccctcaccgccgccctcaccatggccctggcctccatggggaacagcgcccccaagaagtacgacgagatcgacgccgcgccggaggagcgcgcgcgcggcatcaccatcaacaccgccaccgtcgagtacgagaccgccacgcgccactacgcgcacgttgactgcccgggccacgccgactacgtcaagaacatgatcaccggtgccgcgcagatggacggcgccatcctcgtcgtctccggcgccgacggcccgatgccgcagacgaaggagcacgtcctgctggccaagcaggtcggcgtccccaatgtggtggtgttcttgaacaaacaggaccaggtggacgacgccgagctgcttgagctggtggaattggaggtcagggacttgttatcgtcgtatgaattccccggcgacgatgttccggtggtttcgggttcggcattgctggcattggaggccttaatggcgaacccgaaaataaagagaggggagaatgaatgggtggataaaatttatgacttgatggattgtgtggatgactatattccaattccgcagaggcagactgatctgccgtttctgttggccgttgaggatgtgttttcgatcacaggacgtggcacggtggccacggggcgggtggagagaggtaaagtgaaggttggggaccatgtggataaggaagagggtgggaggcattcgccgttctttgcagggtataggcctcagttttacatgaggactactgatgtgaccggtaaggtgacgcagattttgaatgacaatgatgaggtgtccaagatggttatgcccggagacagagtgaagatggtggtggagcttataatgccggtggcttgtgagcaagggatgagatttgcgattagggaaggtggcaagactgttggggctggtgtcattcagtctattattcagtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

411

Amino Acids

44.45

Weight (kDa)

6.15

Isoelectric Point (pI)

39.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1142
Acc36I ACCTGC 1 cut(s) 577
AccB1I GGYRCC 5 cut(s) 192, 260, 497, 515, 536
AccBSI CCGCTC 1 cut(s) 235
AccI GTMKAC 1 cut(s) 276
AccII CGCG 9 cut(s) 220, 371, 384, 386, 388, 390, 436, 446, 503
AccIII TCCGGA 2 cut(s) 186, 210
AclWI GGATC 1 cut(s) 192
AcoI YGGCCR 4 cut(s) 268, 579, 882, 924
AcsI RAATTY 2 cut(s) 698, 807
AcyI GRCGYC 6 cut(s) 193, 366, 516, 537, 594, 642
AfaI GTAC 2 cut(s) 353, 422
AfiI CCNNNNNNNGG 5 cut(s) 186, 313, 330, 604, 933
AgeI ACCGGT 2 cut(s) 494, 1052
AgsI TTSAA 3 cut(s) 33, 619, 1075
AjiI CACGTC 4 cut(s) 250, 274, 571, 914
AjnI CCWGG 2 cut(s) 318, 630
AluBI AGCT 3 cut(s) 649, 658, 1138
AluI AGCT 3 cut(s) 649, 658, 1138
Alw21I GWGCWC 1 cut(s) 570
Alw26I GTCTC 4 cut(s) 178, 419, 535, 1107
AlwI GGATC 1 cut(s) 192
Ama87I CYCGRG 1 cut(s) 460
Aor13HI TCCGGA 2 cut(s) 186, 210
ApeKI GCWGC 1 cut(s) 649
ApoI RAATTY 2 cut(s) 698, 807
ArsI GACNNNNNNTTYG 2 cut(s) 1054, 1086
AsiGI ACCGGT 2 cut(s) 494, 1052
AspS9I GGNCC 5 cut(s) 316, 463, 545, 628, 964
AsuC2I CCSGG 4 cut(s) 461, 462, 705, 1110
AsuHPI GGTGA 7 cut(s) 45, 196, 289, 301, 388, 484, 1072
AvaI CYCGRG 1 cut(s) 460
AvaII GGWCC 2 cut(s) 628, 964
BalI TGGCCA 2 cut(s) 581, 926
BanI GGYRCC 5 cut(s) 192, 260, 497, 515, 536
BanII GRGCYC 1 cut(s) 22
Bbv12I GWGCWC 1 cut(s) 570
BbvI GCAGC 1 cut(s) 636
BccI CCATC 8 cut(s) 208, 272, 407, 502, 527, 814, 1093, 1120
BceAI ACGGC 6 cut(s) 298, 529, 559, 856, 869, 985
BciT130I CCWGG 2 cut(s) 320, 632
BclI TGATCA 1 cut(s) 489
BcnI CCSGG 4 cut(s) 461, 462, 705, 1110
BcoDI GTCTC 4 cut(s) 178, 419, 535, 1107
BfaI CTAG 1 cut(s) 113
BfoI RGCGCY 4 cut(s) 196, 342, 519, 540
BfuAI ACCTGC 1 cut(s) 577
BglI GCCNNNNNGGC 1 cut(s) 761
BisI GCNGC 8 cut(s) 150, 153, 303, 369, 391, 501, 554, 650
BlsI GCNGC 8 cut(s) 151, 154, 304, 370, 392, 502, 555, 651
Bme1390I CCNGG 6 cut(s) 320, 461, 462, 632, 705, 1110
Bme18I GGWCC 2 cut(s) 628, 964
BmeT110I CYCGRG 1 cut(s) 460
BmgBI CACGTC 4 cut(s) 250, 274, 571, 914
BmgT120I GGNCC 5 cut(s) 316, 463, 545, 628, 964
BmiI GGNNCC 7 cut(s) 19, 194, 262, 499, 517, 538, 965
BmrFI CCNGG 6 cut(s) 320, 461, 462, 632, 705, 1110
BmsI GCATC 3 cut(s) 125, 402, 540
BpuEI CTTGAG 1 cut(s) 674
BpuMI CCSGG 4 cut(s) 461, 462, 705, 1110
BsaHI GRCGYC 6 cut(s) 193, 366, 516, 537, 594, 642
BsaI GGTCTC 1 cut(s) 419
BsaJI CCNNGG 7 cut(s) 280, 312, 318, 327, 460, 703, 927
BsaWI WCCGGW 5 cut(s) 186, 210, 494, 718, 1052
BsaXI ACNNNNNCTCC 2 cut(s) 1104, 1134
Bsc4I CCNNNNNNNGG 5 cut(s) 186, 313, 330, 604, 933
Bse118I RCCGGY 3 cut(s) 494, 1052, 1147
Bse3DI GCAATG 1 cut(s) 737
BseAI TCCGGA 2 cut(s) 186, 210
BseBI CCWGG 2 cut(s) 320, 632
BseDI CCNNGG 7 cut(s) 280, 312, 318, 327, 460, 703, 927
BseGI GGATG 6 cut(s) 76, 219, 519, 838, 898, 1173
BseLI CCNNNNNNNGG 5 cut(s) 186, 313, 330, 604, 933
BseMI GCAATG 1 cut(s) 737
BseMII CTCAG 1 cut(s) 1037
BsePI GCGCGC 3 cut(s) 382, 384, 386
BseRI GAGGAG 5 cut(s) 29, 121, 124, 127, 392
BseXI GCAGC 1 cut(s) 636
Bsh1236I CGCG 9 cut(s) 220, 371, 384, 386, 388, 390, 436, 446, 503
BshNI GGYRCC 5 cut(s) 192, 260, 497, 515, 536
BshTI ACCGGT 2 cut(s) 494, 1052
BsiHKAI GWGCWC 1 cut(s) 570
BsiHKCI CYCGRG 1 cut(s) 460
BslFI GGGAC 3 cut(s) 581, 692, 977
BslI CCNNNNNNNGG 5 cut(s) 186, 313, 330, 604, 933
BsmAI GTCTC 4 cut(s) 178, 419, 535, 1107
BsmBI CGTCTC 2 cut(s) 178, 535
BsmFI GGGAC 3 cut(s) 581, 692, 977
BsmI GAATGC 1 cut(s) 994
Bso31I GGTCTC 1 cut(s) 419
BsoBI CYCGRG 1 cut(s) 460
Bsp1286I GDGCHC 2 cut(s) 22, 570
Bsp13I TCCGGA 2 cut(s) 186, 210
Bsp143I GATC 5 cut(s) 197, 360, 489, 865, 903
Bsp19I CCATGG 2 cut(s) 312, 327
BspCNI CTCAG 1 cut(s) 1036
BspEI TCCGGA 2 cut(s) 186, 210
BspFNI CGCG 9 cut(s) 220, 371, 384, 386, 388, 390, 436, 446, 503
BspLI GGNNCC 7 cut(s) 19, 194, 262, 499, 517, 538, 965
BspMI ACCTGC 1 cut(s) 577
BspPI GGATC 1 cut(s) 192
BspT107I GGYRCC 5 cut(s) 192, 260, 497, 515, 536
BspTNI GGTCTC 1 cut(s) 419
BsrBI CCGCTC 1 cut(s) 235
BsrDI GCAATG 1 cut(s) 737
BsrFI RCCGGY 3 cut(s) 494, 1052, 1147
BssAI RCCGGY 3 cut(s) 494, 1052, 1147
BssECI CCNNGG 7 cut(s) 280, 312, 318, 327, 460, 703, 927
BssHII GCGCGC 3 cut(s) 382, 384, 386
BssMI GATC 5 cut(s) 197, 360, 489, 865, 903
BssNI GRCGYC 6 cut(s) 193, 366, 516, 537, 594, 642
BssT1I CCWWGG 2 cut(s) 312, 327
Bst2UI CCWGG 2 cut(s) 320, 632
Bst4CI ACNGT 4 cut(s) 208, 415, 922, 1201
Bst6I CTCTTC 3 cut(s) 34, 47, 975
BstACI GRCGYC 6 cut(s) 193, 366, 516, 537, 594, 642
BstAPI GCANNNNNTGC 1 cut(s) 574
BstC8I GCNNGC 5 cut(s) 384, 386, 388, 579, 744
BstDEI CTNAG 1 cut(s) 1023
BstDSI CCRYGG 4 cut(s) 280, 312, 327, 927
BstF5I GGATG 6 cut(s) 76, 219, 519, 838, 898, 1173
BstFNI CGCG 9 cut(s) 220, 371, 384, 386, 388, 390, 436, 446, 503
BstH2I RGCGCY 4 cut(s) 196, 342, 519, 540
BstKTI GATC 5 cut(s) 200, 363, 492, 868, 906
BstMAI GTCTC 4 cut(s) 178, 419, 535, 1107
BstMBI GATC 5 cut(s) 197, 360, 489, 865, 903
BstNI CCWGG 2 cut(s) 320, 632
BstSCI CCNGG 6 cut(s) 318, 459, 460, 630, 703, 1108
BstUI CGCG 9 cut(s) 220, 371, 384, 386, 388, 390, 436, 446, 503
BstV1I GCAGC 1 cut(s) 636
BstXI CCANNNNNNTGG 2 cut(s) 319, 607
BtgI CCRYGG 4 cut(s) 280, 312, 327, 927
BtrI CACGTC 4 cut(s) 250, 274, 571, 914
BtsCI GGATG 6 cut(s) 76, 219, 519, 838, 898, 1173
BveI ACCTGC 1 cut(s) 577
Cac8I GCNNGC 5 cut(s) 384, 386, 388, 579, 744
Cfr10I RCCGGY 3 cut(s) 494, 1052, 1147
Cfr13I GGNCC 5 cut(s) 316, 463, 545, 628, 964
Cfr9I CCCGGG 1 cut(s) 460
CseI GACGC 4 cut(s) 374, 583, 650, 1072
CsiI ACCWGGT 1 cut(s) 630
Csp6I GTAC 2 cut(s) 352, 421
CspAI ACCGGT 2 cut(s) 494, 1052
CviAII CATG 5 cut(s) 313, 328, 487, 968, 1033
CviQI GTAC 2 cut(s) 352, 421
DdeI CTNAG 1 cut(s) 1023
DinI GGCGCC 3 cut(s) 194, 517, 538
DpnI GATC 5 cut(s) 199, 362, 491, 867, 905
DpnII GATC 5 cut(s) 197, 360, 489, 865, 903
EaeI YGGCCR 4 cut(s) 268, 579, 882, 924
Eam1104I CTCTTC 3 cut(s) 34, 47, 975
EarI CTCTTC 3 cut(s) 34, 47, 975
EciI GGCGGA 2 cut(s) 130, 136
Eco130I CCWWGG 2 cut(s) 312, 327
Eco147I AGGCCT 2 cut(s) 755, 1021
Eco24I GRGCYC 1 cut(s) 22
Eco31I GGTCTC 1 cut(s) 419
Eco47I GGWCC 2 cut(s) 628, 964
Eco88I CYCGRG 1 cut(s) 460
EcoRI GAATTC 1 cut(s) 698
EcoRII CCWGG 2 cut(s) 318, 630
EcoT14I CCWWGG 2 cut(s) 312, 327
EcoT38I GRGCYC 1 cut(s) 22
EgeI GGCGCC 3 cut(s) 194, 517, 538
EheI GGCGCC 3 cut(s) 194, 517, 538
ErhI CCWWGG 2 cut(s) 312, 327
Esp3I CGTCTC 2 cut(s) 178, 535
FaeI CATG 5 cut(s) 316, 331, 490, 971, 1036
FaqI GGGAC 3 cut(s) 581, 692, 977
FatI CATG 5 cut(s) 312, 327, 486, 967, 1032
FauI CCCGC 1 cut(s) 927
FbaI TGATCA 1 cut(s) 489
FblI GTMKAC 1 cut(s) 276
Fnu4HI GCNGC 8 cut(s) 150, 153, 303, 369, 391, 501, 554, 650
FokI GGATG 6 cut(s) 63, 226, 506, 845, 905, 1180
FriOI GRGCYC 1 cut(s) 22
Fsp4HI GCNGC 8 cut(s) 150, 153, 303, 369, 391, 501, 554, 650
FspBI CTAG 1 cut(s) 113
GluI GCNGC 8 cut(s) 150, 153, 303, 369, 391, 501, 554, 650
HaeII RGCGCY 4 cut(s) 196, 342, 519, 540
HgaI GACGC 4 cut(s) 374, 583, 650, 1072
Hin1I GRCGYC 6 cut(s) 193, 366, 516, 537, 594, 642
Hin1II CATG 5 cut(s) 316, 331, 490, 971, 1036
HincII GTYRAC 3 cut(s) 253, 277, 454
HindII GTYRAC 3 cut(s) 253, 277, 454
HphI GGTGA 7 cut(s) 45, 196, 289, 301, 388, 484, 1072
Hpy166II GTNNAC 4 cut(s) 253, 277, 454, 637
Hpy188I TCNGA 1 cut(s) 17
Hpy188III TCNNGA 4 cut(s) 187, 211, 481, 616
Hpy8I GTNNAC 4 cut(s) 253, 277, 454, 637
HpyAV CCTTC 5 cut(s) 166, 211, 556, 949, 1181
HpyCH4III ACNGT 4 cut(s) 208, 415, 922, 1201
HpyCH4IV ACGT 6 cut(s) 249, 273, 450, 477, 570, 913
HpyCH4V TGCA 1 cut(s) 1010
HpyF3I CTNAG 1 cut(s) 1023
HpySE526I ACGT 6 cut(s) 249, 273, 450, 477, 570, 913
Hsp92I GRCGYC 6 cut(s) 193, 366, 516, 537, 594, 642
Hsp92II CATG 5 cut(s) 316, 331, 490, 971, 1036
KasI GGCGCC 3 cut(s) 192, 515, 536
Kpn2I TCCGGA 2 cut(s) 186, 210
Ksp22I TGATCA 1 cut(s) 489
Kzo9I GATC 5 cut(s) 197, 360, 489, 865, 903
LmnI GCTCC 5 cut(s) 17, 189, 379, 565, 1135
Lsp1109I GCAGC 1 cut(s) 636
LweI GCATC 3 cut(s) 125, 402, 540
MabI ACCWGGT 1 cut(s) 630
MaeI CTAG 1 cut(s) 113
MaeII ACGT 6 cut(s) 249, 273, 450, 477, 570, 913
MaeIII GTNAC 2 cut(s) 1048, 1060
MalI GATC 5 cut(s) 199, 362, 491, 867, 905
MauBI CGCGCGCG 2 cut(s) 384, 386
MbiI CCGCTC 1 cut(s) 235
MboI GATC 5 cut(s) 197, 360, 489, 865, 903
MboII GAAGA 5 cut(s) 21, 34, 250, 992, 1135
MhlI GDGCHC 2 cut(s) 22, 570
MlsI TGGCCA 2 cut(s) 581, 926
MluCI AATT 4 cut(s) 665, 698, 807, 846
MluNI TGGCCA 2 cut(s) 581, 926
Mly113I GGCGCC 3 cut(s) 193, 516, 537
Mox20I TGGCCA 2 cut(s) 581, 926
MroI TCCGGA 2 cut(s) 186, 210
MscI TGGCCA 2 cut(s) 581, 926
MseI TTAA 1 cut(s) 758
Msp20I TGGCCA 2 cut(s) 581, 926
MspR9I CCNGG 6 cut(s) 320, 461, 462, 632, 705, 1110
Mva1269I GAATGC 1 cut(s) 994
MvaI CCWGG 2 cut(s) 320, 632
MvnI CGCG 9 cut(s) 220, 371, 384, 386, 388, 390, 436, 446, 503
NarI GGCGCC 3 cut(s) 193, 516, 537
NciI CCSGG 4 cut(s) 461, 462, 705, 1110
NcoI CCATGG 2 cut(s) 312, 327
NdeII GATC 5 cut(s) 197, 360, 489, 865, 903
NlaIII CATG 5 cut(s) 316, 331, 490, 971, 1036
NlaIV GGNNCC 7 cut(s) 19, 194, 262, 499, 517, 538, 965
NmeAIII GCCGAG 1 cut(s) 670
NmuCI GTSAC 2 cut(s) 1048, 1060
PauI GCGCGC 3 cut(s) 382, 384, 386
PceI AGGCCT 2 cut(s) 755, 1021
PcsI WCGNNNNNNNCGW 4 cut(s) 165, 273, 360, 474
PctI GAATGC 1 cut(s) 994
PflFI GACNNNGTC 1 cut(s) 476
PinAI ACCGGT 2 cut(s) 494, 1052
PkrI GCNGC 8 cut(s) 151, 154, 304, 370, 392, 502, 555, 651
PluTI GGCGCC 3 cut(s) 196, 519, 540
PsiI TTATAA 1 cut(s) 1142
Psp6I CCWGG 2 cut(s) 318, 630
PspGI CCWGG 2 cut(s) 318, 630
PspN4I GGNNCC 7 cut(s) 19, 194, 262, 499, 517, 538, 965
PspPI GGNCC 5 cut(s) 316, 463, 545, 628, 964
PsyI GACNNNGTC 1 cut(s) 476
PteI GCGCGC 3 cut(s) 382, 384, 386
RsaI GTAC 2 cut(s) 353, 422
RsaNI GTAC 2 cut(s) 352, 421
SalI GTCGAC 1 cut(s) 275
SaqAI TTAA 1 cut(s) 758
SatI GCNGC 8 cut(s) 150, 153, 303, 369, 391, 501, 554, 650
Sau3AI GATC 5 cut(s) 197, 360, 489, 865, 903
Sau96I GGNCC 5 cut(s) 316, 463, 545, 628, 964
ScrFI CCNGG 6 cut(s) 320, 461, 462, 632, 705, 1110
SduI GDGCHC 2 cut(s) 22, 570
SexAI ACCWGGT 1 cut(s) 630
SfaNI GCATC 3 cut(s) 125, 402, 540
SfoI GGCGCC 3 cut(s) 194, 517, 538
SgrAI CRCCGGYG 1 cut(s) 494
SinI GGWCC 2 cut(s) 628, 964
SmaI CCCGGG 1 cut(s) 462
SmlI CTYRAG 1 cut(s) 653
SmoI CTYRAG 1 cut(s) 653
SrfI GCCCGGGC 1 cut(s) 462
Sse9I AATT 4 cut(s) 665, 698, 807, 846
SseBI AGGCCT 2 cut(s) 755, 1021
SspDI GGCGCC 3 cut(s) 192, 515, 536
SspMI CTAG 1 cut(s) 113
StuI AGGCCT 2 cut(s) 755, 1021
StyD4I CCNGG 6 cut(s) 318, 459, 460, 630, 703, 1108
StyI CCWWGG 2 cut(s) 312, 327
TaaI ACNGT 4 cut(s) 208, 415, 922, 1201
TaiI ACGT 6 cut(s) 252, 276, 453, 480, 573, 916
TaqI TCGA 6 cut(s) 159, 231, 276, 363, 417, 902
TasI AATT 4 cut(s) 665, 698, 807, 846
TauI GCSGC 7 cut(s) 152, 155, 305, 371, 393, 503, 556
Tru1I TTAA 1 cut(s) 758
Tru9I TTAA 1 cut(s) 758
TseFI GTSAC 2 cut(s) 1048, 1060
TseI GCWGC 1 cut(s) 649
Tsp45I GTSAC 2 cut(s) 1048, 1060
TspDTI ATGAA 2 cut(s) 711, 807
TspMI CCCGGG 1 cut(s) 460
Tth111I GACNNNGTC 1 cut(s) 476
VpaK11BI GGWCC 2 cut(s) 628, 964
XapI RAATTY 2 cut(s) 698, 807
XcmI CCANNNNNNNNNTGG 1 cut(s) 934
XmaI CCCGGG 1 cut(s) 460
XmiI GTMKAC 1 cut(s) 276
XspI CTAG 1 cut(s) 113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.