AT4G20360

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
10989910 .. 10992509
2600 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G20360.1

Sequence Viewer

Length: 1431 bp
ATGGCGATTTCGGCTCCAGCCGCTTGTTCTTCCTCCTCTAGAATTCTCTGTTCCTACTCCTCTCCTTCTCCTTCTCTCTGTCCCGCCATTTCCACCTCTGGTAAACTCAAAACCCTAACTCTCTCTTCCTCCTTCCTCCCTTCTTACTCATTAACCACCACCTCCGCTTCTCAATCCACTCGTCGCTCCTTCACCGTCCGCGCCGCTCGTGGAAAGTTCGAGAGGAAGAAGCCTCATGTCAACATCGGAACCATCGGTCATGTTGACCATGGGAAAACTACTTTAACCGCAGCTCTAACCATGGCTCTCGCTTCCATTGGTTCCAGCGTCGCTAAAAAGTACGACGAGATTGACGCTGCGCCGGAGGAGAGAGCTCGTGGTATCACAATCAACACTGCTACTGTTGAGTACGAGACTGAGAATCGTCACTACGCTCACGTTGATTGTCCTGGTCACGCTGATTACGTTAAGAATATGATTACCGGAGCTGCACAGATGGACGGAGCTATCCTCGTTGTTTCCGGCGCCGATGGTCCTATGCCTCAGACTAAAGAGCATATCCTTTTGGCTAAGCAGGTTGGTGTTCCTGATATGGTTGTGTTTCTTAACAAAGAGGATCAAGTAGATGATGCAGAGTTGCTAGAGCTCGTTGAGCTTGAGGTTCGTGAGCTTCTCTCGTCTTATGAATTTAACGGTGATGATATTCCGATTATCTCTGGTTCTGCTCTTTTAGCCGTTGAGACTCTTACTGAGAATCCTAAGGTTAAGAGAGGTGATAACAAATGGGTAGATAAGATTTATGAACTTATGGATGCTGTTGATGATTACATCCCTATCCCTCAGAGACAAACTGAATTGCCATTCTTGTTAGCTGTTGAGGATGTGTTCTCTATCACTGGACGTGGTACGGTGGCTACAGGGCGTGTCGAGAGAGGTACGGTTAAGGTAGGAGAGACTGTAGATTTAGTGGGTTTGAGGGAGACTAGGAGTTACACTGTCACTGGGGTTGAAATGTTTCAGAAGATTCTTGATGAGGCTTTAGCTGGTGACAATGTAGGGTTGTTGCTTAGGGGTATTCAAAAGGCTGATATTCAGAGAGGTATGGTTTTAGCTAAGCCGGGATCGATTACTCCACATACCAAGTTTGAAGCAATTATCTATGTGTTGAAGAAAGAGGAAGGTGGAAGGCATTCTCCATTCTTTGCAGGGTACAGGCCTCAGTTCTACATGAGGACGACTGATGTTACGGGTAAAGTGACGAAGATCATGAACGACAAAGATGAAGAGTCGAAGATGGTTATGCCCGGTGATCGAGTGAAGATTGTTGTTGAGCTTATTGTGCCGGTGGCTTGTGAACAAGGGATGAGGTTTGCTATCAGAGAAGGAGGAAAGACTGTTGGTGCTGGAGTTATTGGGACGATCCTCGAATGA

Protein Analysis

476

Amino Acids

51.63

Weight (kDa)

5.84

Isoelectric Point (pI)

35.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GTP_EFTU PF00009 77 - 278 1.7e-63 Elongation factor Tu GTP binding domain
GTP_EFTU_D2 PF03144 302 - 371 1.2e-19 Elongation factor Tu domain 2
GTP_EFTU_D3 PF03143 375 - 474 1.8e-39 Elongation factor Tu C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 565
AccB1I GGYRCC 1 cut(s) 524
AccBSI CCGCTC 1 cut(s) 206
AccII CGCG 1 cut(s) 201
AciI CCGC 6 cut(s) 21, 84, 165, 199, 204, 288
AclWI GGATC 3 cut(s) 624, 1129, 1414
AcsI RAATTY 2 cut(s) 42, 686
AcyI GRCGYC 1 cut(s) 525
AfaI GTAC 5 cut(s) 341, 410, 907, 937, 1211
AgsI TTSAA 4 cut(s) 1010, 1079, 1148, 1168
AjiI CACGTC 1 cut(s) 902
AjnI CCWGG 1 cut(s) 448
Alw21I GWGCWC 2 cut(s) 376, 648
Alw26I GTCTC 5 cut(s) 407, 734, 838, 947, 974
AlwI GGATC 3 cut(s) 624, 1129, 1414
AoxI GGCC 1 cut(s) 1214
ApeKI GCWGC 3 cut(s) 290, 356, 488
ApoI RAATTY 2 cut(s) 42, 686
Asp700I GAANNNNTTC 2 cut(s) 1014, 1189
AspLEI GCGC 3 cut(s) 203, 361, 527
AspS9I GGNCC 1 cut(s) 533
AsuC2I CCSGG 2 cut(s) 1119, 1305
AsuHPI GGTGA 5 cut(s) 184, 707, 785, 1058, 1319
AvaII GGWCC 1 cut(s) 533
AxyI CCTNAGG 1 cut(s) 759
BanI GGYRCC 1 cut(s) 524
BanII GRGCYC 2 cut(s) 376, 648
BauI CACGAG 2 cut(s) 207, 375
Bbv12I GWGCWC 2 cut(s) 376, 648
BbvI GCAGC 3 cut(s) 302, 343, 475
BccI CCATC 4 cut(s) 260, 490, 524, 1288
BceAI ACGGC 1 cut(s) 719
BciT130I CCWGG 1 cut(s) 450
BcnI CCSGG 2 cut(s) 1119, 1305
BcoDI GTCTC 5 cut(s) 407, 734, 838, 947, 974
BfaI CTAG 3 cut(s) 39, 641, 984
BfmI CTRYAG 2 cut(s) 915, 957
BfoI RGCGCY 1 cut(s) 528
BfuAI ACCTGC 1 cut(s) 565
BisI GCNGC 5 cut(s) 21, 204, 291, 357, 489
BlpI GCTNAGC 2 cut(s) 570, 1113
BlsI GCNGC 5 cut(s) 22, 205, 292, 358, 490
Bme1390I CCNGG 3 cut(s) 450, 1119, 1305
Bme18I GGWCC 1 cut(s) 533
BmgBI CACGTC 1 cut(s) 902
BmgT120I GGNCC 1 cut(s) 533
BmiI GGNNCC 4 cut(s) 15, 250, 322, 526
BmrFI CCNGG 3 cut(s) 450, 1119, 1305
BmrI ACTGGG 1 cut(s) 1011
BmsI GCATC 2 cut(s) 619, 802
BmuI ACTGGG 1 cut(s) 1011
BplI GAGNNNNNCTC 4 cut(s) 495, 527, 659, 691
BpmI CTGGAG 1 cut(s) 1425
Bpu10I CCTNAGC 1 cut(s) 1067
Bpu1102I GCTNAGC 2 cut(s) 570, 1113
BpuEI CTTGAG 1 cut(s) 677
BpuMI CCSGG 2 cut(s) 1119, 1305
Bsa29I ATCGAT 1 cut(s) 1124
BsaHI GRCGYC 1 cut(s) 525
BsaJI CCNNGG 2 cut(s) 268, 300
BsaWI WCCGGW 1 cut(s) 482
BsaXI ACNNNNNCTCC 2 cut(s) 942, 972
Bse118I RCCGGY 1 cut(s) 1342
Bse1I ACTGG 2 cut(s) 901, 1006
Bse21I CCTNAGG 1 cut(s) 759
BseBI CCWGG 1 cut(s) 450
BseCI ATCGAT 1 cut(s) 1124
BseDI CCNNGG 2 cut(s) 268, 300
BseGI GGATG 4 cut(s) 817, 828, 886, 1368
BseMII CTCAG 5 cut(s) 408, 557, 741, 854, 1232
BseNI ACTGG 2 cut(s) 901, 1006
BseRI GAGGAG 3 cut(s) 25, 49, 380
BseXI GCAGC 3 cut(s) 302, 343, 475
BsgI GTGCAG 1 cut(s) 474
Bsh1236I CGCG 1 cut(s) 201
BshFI GGCC 1 cut(s) 1216
BshNI GGYRCC 1 cut(s) 524
BshVI ATCGAT 1 cut(s) 1124
BsiHKAI GWGCWC 2 cut(s) 376, 648
BsiSI CCGG 6 cut(s) 362, 483, 522, 1118, 1305, 1343
BslFI GGGAC 1 cut(s) 66
BsmAI GTCTC 5 cut(s) 407, 734, 838, 947, 974
BsmFI GGGAC 1 cut(s) 66
BsmI GAATGC 1 cut(s) 1189
BsnI GGCC 1 cut(s) 1216
Bsp1286I GDGCHC 2 cut(s) 376, 648
Bsp143I GATC 5 cut(s) 616, 1121, 1263, 1309, 1419
Bsp1720I GCTNAGC 2 cut(s) 570, 1113
Bsp19I CCATGG 2 cut(s) 268, 300
BspACI CCGC 6 cut(s) 21, 84, 165, 199, 204, 288
BspANI GGCC 1 cut(s) 1216
BspCNI CTCAG 5 cut(s) 409, 556, 742, 853, 1231
BspDI ATCGAT 1 cut(s) 1124
BspFNI CGCG 1 cut(s) 201
BspHI TCATGA 1 cut(s) 1266
BspLI GGNNCC 4 cut(s) 15, 250, 322, 526
BspMI ACCTGC 1 cut(s) 565
BspPI GGATC 3 cut(s) 624, 1129, 1414
BspT107I GGYRCC 1 cut(s) 524
BsrBI CCGCTC 1 cut(s) 206
BsrFI RCCGGY 1 cut(s) 1342
BsrI ACTGG 2 cut(s) 901, 1006
BssAI RCCGGY 1 cut(s) 1342
BssECI CCNNGG 2 cut(s) 268, 300
BssMI GATC 5 cut(s) 616, 1121, 1263, 1309, 1419
BssNI GRCGYC 1 cut(s) 525
BssSI CACGAG 2 cut(s) 207, 375
BssT1I CCWWGG 2 cut(s) 268, 300
Bst2BI CACGAG 2 cut(s) 207, 375
Bst2UI CCWGG 1 cut(s) 450
Bst4CI ACNGT 8 cut(s) 196, 403, 695, 910, 940, 958, 997, 1396
Bst6I CTCTTC 2 cut(s) 130, 1278
BstACI GRCGYC 1 cut(s) 525
BstDEI CTNAG 9 cut(s) 417, 543, 570, 750, 759, 840, 1067, 1113, 1218
BstDSI CCRYGG 2 cut(s) 268, 300
BstF5I GGATG 4 cut(s) 817, 828, 886, 1368
BstFNI CGCG 1 cut(s) 201
BstH2I RGCGCY 1 cut(s) 528
BstHHI GCGC 3 cut(s) 203, 361, 527
BstKTI GATC 5 cut(s) 619, 1124, 1266, 1312, 1422
BstMAI GTCTC 5 cut(s) 407, 734, 838, 947, 974
BstMBI GATC 5 cut(s) 616, 1121, 1263, 1309, 1419
BstMWI GCNNNNNNNGC 5 cut(s) 11, 20, 652, 731, 1339
BstNI CCWGG 1 cut(s) 450
BstSCI CCNGG 3 cut(s) 448, 1117, 1303
BstSFI CTRYAG 2 cut(s) 915, 957
BstUI CGCG 1 cut(s) 201
BstV1I GCAGC 3 cut(s) 302, 343, 475
Bsu15I ATCGAT 1 cut(s) 1124
Bsu36I CCTNAGG 1 cut(s) 759
BsuRI GGCC 1 cut(s) 1216
BsuTUI ATCGAT 1 cut(s) 1124
BtgI CCRYGG 2 cut(s) 268, 300
BtrI CACGTC 1 cut(s) 902
BtsCI GGATG 4 cut(s) 817, 828, 886, 1368
BtsI GCAGTG 1 cut(s) 393
BtsIMutI CAGTG 4 cut(s) 393, 894, 993, 999
BveI ACCTGC 1 cut(s) 565
CciI TCATGA 1 cut(s) 1266
CfoI GCGC 3 cut(s) 203, 361, 527
Cfr10I RCCGGY 1 cut(s) 1342
Cfr13I GGNCC 1 cut(s) 533
ClaI ATCGAT 1 cut(s) 1124
CseI GACGC 2 cut(s) 316, 362
Csp6I GTAC 5 cut(s) 340, 409, 906, 936, 1210
CviAII CATG 6 cut(s) 236, 260, 269, 301, 1228, 1267
CviQI GTAC 5 cut(s) 340, 409, 906, 936, 1210
DdeI CTNAG 9 cut(s) 417, 543, 570, 750, 759, 840, 1067, 1113, 1218
DinI GGCGCC 1 cut(s) 526
DpnI GATC 5 cut(s) 618, 1123, 1265, 1311, 1421
DpnII GATC 5 cut(s) 616, 1121, 1263, 1309, 1419
Eam1104I CTCTTC 2 cut(s) 130, 1278
EarI CTCTTC 2 cut(s) 130, 1278
Ecl136II GAGCTC 2 cut(s) 374, 646
Eco130I CCWWGG 2 cut(s) 268, 300
Eco147I AGGCCT 1 cut(s) 1216
Eco24I GRGCYC 2 cut(s) 376, 648
Eco47I GGWCC 1 cut(s) 533
Eco53kI GAGCTC 2 cut(s) 374, 646
Eco81I CCTNAGG 1 cut(s) 759
EcoICRI GAGCTC 2 cut(s) 374, 646
EcoRI GAATTC 1 cut(s) 42
EcoRII CCWGG 1 cut(s) 448
EcoT14I CCWWGG 2 cut(s) 268, 300
EcoT38I GRGCYC 2 cut(s) 376, 648
EgeI GGCGCC 1 cut(s) 526
EheI GGCGCC 1 cut(s) 526
ErhI CCWWGG 2 cut(s) 268, 300
FaeI CATG 6 cut(s) 239, 263, 272, 304, 1231, 1270
FaqI GGGAC 1 cut(s) 66
FatI CATG 6 cut(s) 235, 259, 268, 300, 1227, 1266
FauI CCCGC 1 cut(s) 91
Fnu4HI GCNGC 5 cut(s) 21, 204, 291, 357, 489
FokI GGATG 4 cut(s) 815, 824, 893, 1375
FriOI GRGCYC 2 cut(s) 376, 648
Fsp4HI GCNGC 5 cut(s) 21, 204, 291, 357, 489
FspBI CTAG 3 cut(s) 39, 641, 984
GlaI GCGC 3 cut(s) 202, 360, 526
GluI GCNGC 5 cut(s) 21, 204, 291, 357, 489
GsuI CTGGAG 1 cut(s) 1425
HaeII RGCGCY 1 cut(s) 528
HaeIII GGCC 1 cut(s) 1216
HapII CCGG 6 cut(s) 362, 483, 522, 1118, 1305, 1343
HgaI GACGC 2 cut(s) 316, 362
HhaI GCGC 3 cut(s) 203, 361, 527
Hin1I GRCGYC 1 cut(s) 525
Hin1II CATG 6 cut(s) 239, 263, 272, 304, 1231, 1270
Hin6I GCGC 3 cut(s) 201, 359, 525
HinP1I GCGC 3 cut(s) 201, 359, 525
HincII GTYRAC 2 cut(s) 241, 265
HindII GTYRAC 2 cut(s) 241, 265
HinfI GANTC 5 cut(s) 421, 742, 754, 1024, 1286
HpaII CCGG 6 cut(s) 362, 483, 522, 1118, 1305, 1343
HphI GGTGA 5 cut(s) 184, 707, 785, 1058, 1319
Hpy166II GTNNAC 4 cut(s) 104, 241, 265, 1355
Hpy188I TCNGA 7 cut(s) 248, 546, 708, 843, 1020, 1095, 1379
Hpy188III TCNNGA 7 cut(s) 39, 220, 587, 665, 928, 1028, 1267
Hpy8I GTNNAC 4 cut(s) 104, 241, 265, 1355
Hpy99I CGWCG 3 cut(s) 186, 332, 347
HpyAV CCTTC 8 cut(s) 75, 81, 142, 150, 199, 1172, 1179, 1376
HpyCH4III ACNGT 8 cut(s) 196, 403, 695, 910, 940, 958, 997, 1396
HpyCH4IV ACGT 3 cut(s) 438, 465, 901
HpyCH4V TGCA 3 cut(s) 491, 632, 1205
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 20, 652, 731, 1339
HpyF3I CTNAG 9 cut(s) 417, 543, 570, 750, 759, 840, 1067, 1113, 1218
HpySE526I ACGT 3 cut(s) 438, 465, 901
Hsp92I GRCGYC 1 cut(s) 525
Hsp92II CATG 6 cut(s) 239, 263, 272, 304, 1231, 1270
HspAI GCGC 3 cut(s) 201, 359, 525
KasI GGCGCC 1 cut(s) 524
Kzo9I GATC 5 cut(s) 616, 1121, 1263, 1309, 1419
LmnI GCTCC 4 cut(s) 19, 191, 485, 503
Lsp1109I GCAGC 3 cut(s) 302, 343, 475
LweI GCATC 2 cut(s) 619, 802
MaeI CTAG 3 cut(s) 39, 641, 984
MaeII ACGT 3 cut(s) 438, 465, 901
MaeIII GTNAC 7 cut(s) 425, 452, 989, 997, 1046, 1243, 1255
MalI GATC 5 cut(s) 618, 1123, 1265, 1311, 1421
MbiI CCGCTC 1 cut(s) 206
MboI GATC 5 cut(s) 616, 1121, 1263, 1309, 1419
MboII GAAGA 9 cut(s) 21, 117, 238, 1033, 1180, 1273, 1295, 1303, 1330
MhlI GDGCHC 2 cut(s) 376, 648
MluCI AATT 4 cut(s) 42, 686, 854, 1152
Mly113I GGCGCC 1 cut(s) 525
MlyI GAGTC 2 cut(s) 736, 1295
MroXI GAANNNNTTC 2 cut(s) 1014, 1189
MseI TTAA 7 cut(s) 152, 284, 468, 606, 690, 765, 942
MspI CCGG 6 cut(s) 362, 483, 522, 1118, 1305, 1343
MspR9I CCNGG 3 cut(s) 450, 1119, 1305
Mva1269I GAATGC 1 cut(s) 1189
MvaI CCWGG 1 cut(s) 450
MvnI CGCG 1 cut(s) 201
MwoI GCNNNNNNNGC 5 cut(s) 11, 20, 652, 731, 1339
NarI GGCGCC 1 cut(s) 525
NciI CCSGG 2 cut(s) 1119, 1305
NcoI CCATGG 2 cut(s) 268, 300
NdeII GATC 5 cut(s) 616, 1121, 1263, 1309, 1419
NlaIII CATG 6 cut(s) 239, 263, 272, 304, 1231, 1270
NlaIV GGNNCC 4 cut(s) 15, 250, 322, 526
NmuCI GTSAC 5 cut(s) 425, 452, 997, 1046, 1255
PagI TCATGA 1 cut(s) 1266
PceI AGGCCT 1 cut(s) 1216
PcsI WCGNNNNNNNCGW 1 cut(s) 462
PctI GAATGC 1 cut(s) 1189
PdmI GAANNNNTTC 2 cut(s) 1014, 1189
PfeI GAWTC 3 cut(s) 421, 754, 1024
PkrI GCNGC 5 cut(s) 22, 205, 292, 358, 490
PleI GAGTC 2 cut(s) 736, 1294
PluTI GGCGCC 1 cut(s) 528
PpsI GAGTC 2 cut(s) 736, 1294
Psp124BI GAGCTC 2 cut(s) 376, 648
Psp6I CCWGG 1 cut(s) 448
PspGI CCWGG 1 cut(s) 448
PspN4I GGNNCC 4 cut(s) 15, 250, 322, 526
PspPI GGNCC 1 cut(s) 533
RsaI GTAC 5 cut(s) 341, 410, 907, 937, 1211
RsaNI GTAC 5 cut(s) 340, 409, 906, 936, 1210
SacI GAGCTC 2 cut(s) 376, 648
SaqAI TTAA 7 cut(s) 152, 284, 468, 606, 690, 765, 942
SatI GCNGC 5 cut(s) 21, 204, 291, 357, 489
Sau3AI GATC 5 cut(s) 616, 1121, 1263, 1309, 1419
Sau96I GGNCC 1 cut(s) 533
SchI GAGTC 2 cut(s) 736, 1295
ScrFI CCNGG 3 cut(s) 450, 1119, 1305
SduI GDGCHC 2 cut(s) 376, 648
SfaNI GCATC 2 cut(s) 619, 802
SfcI CTRYAG 2 cut(s) 915, 957
SfoI GGCGCC 1 cut(s) 526
SinI GGWCC 1 cut(s) 533
SmlI CTYRAG 1 cut(s) 656
SmoI CTYRAG 1 cut(s) 656
Sse9I AATT 4 cut(s) 42, 686, 854, 1152
SseBI AGGCCT 1 cut(s) 1216
SsiI CCGC 6 cut(s) 21, 84, 165, 199, 204, 288
SspDI GGCGCC 1 cut(s) 524
SspMI CTAG 3 cut(s) 39, 641, 984
SstI GAGCTC 2 cut(s) 376, 648
StuI AGGCCT 1 cut(s) 1216
StyD4I CCNGG 3 cut(s) 448, 1117, 1303
StyI CCWWGG 2 cut(s) 268, 300
TaaI ACNGT 8 cut(s) 196, 403, 695, 910, 940, 958, 997, 1396
TaiI ACGT 3 cut(s) 441, 468, 904
TaqI TCGA 6 cut(s) 219, 927, 1124, 1289, 1312, 1425
TaqII GACCGA 1 cut(s) 245
TasI AATT 4 cut(s) 42, 686, 854, 1152
TauI GCSGC 2 cut(s) 23, 206
TfiI GAWTC 3 cut(s) 421, 754, 1024
Tru1I TTAA 7 cut(s) 152, 284, 468, 606, 690, 765, 942
Tru9I TTAA 7 cut(s) 152, 284, 468, 606, 690, 765, 942
TscAI CASTG 4 cut(s) 400, 901, 1000, 1006
TseFI GTSAC 5 cut(s) 425, 452, 997, 1046, 1255
TseI GCWGC 3 cut(s) 290, 356, 488
Tsp45I GTSAC 5 cut(s) 425, 452, 997, 1046, 1255
TspDTI ATGAA 4 cut(s) 699, 816, 1283, 1296
TspGWI ACGGA 1 cut(s) 516
TspRI CASTG 4 cut(s) 400, 901, 1000, 1006
VpaK11BI GGWCC 1 cut(s) 533
XapI RAATTY 2 cut(s) 42, 686
XbaI TCTAGA 1 cut(s) 38
XmnI GAANNNNTTC 2 cut(s) 1014, 1189
XspI CTAG 3 cut(s) 39, 641, 984
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.