pycom07g01120

Peptidyl-prolyl cis-trans isomerase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
917032 .. 918320
1289 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 579 bp
ATGAAGTCTGGAGAGCATGCCCTATTACATGTAGGCTGGGAGTTGGGGTATGGGAAAGAAGGGAGCTTTTCTTTTCCGAATGTTCCACCATTGGCAGATATATCATATGAAGTTGAGCTTATTGGATTTGATGAAACCAAAGAAGGGAAAGCTCGTAGTGACATGACTGTGGAGGAAAGGATTGGAGCAGCAGATAGAAGAAAGATGGATGGAAATGCTTTACTTAAAGAGGAAAAACTAGAGGAGGCAATGCAATGGTATGAAATGGCTATAGCGTATATGGGTGACAACTTCATGTTCCAGTTGTTTGGGAAGTGCAGGGAGATGGCTTTGGCTGTTAAAAATCCATGCCACCTTAACATGGCAGCGTCTTTTATAAAGCGCAAGCGTTATCAAGAAGCCGTCAGACAATGCAGTATTGTACTGACAGAGGATGAAAACAACGTCGAAGTGCTATTTAGGCGAGGAAAAGCCAGAGCAGAGCTTGGGCAGACAGATGCTGCACGGGAAGACTCTCTAAAGGCAAGCAAATTTGCACCTCAAGACAAAGCTATTGCAAGAGAGTTGTCAGCTTGCTGA

Protein Analysis

193

Amino Acids

21.68

Weight (kDa)

5.57

Isoelectric Point (pI)

37.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0020159)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G21640
malus_domestica MD02G1308400.v1.1 MD07G1017200.v1.1
pyrus_communis pycom02g25970 pycom07g01120
rosa_samantha Rh5BG177700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 377
AcsI RAATTY 1 cut(s) 530
AfaI GTAC 1 cut(s) 423
AfiI CCNNNNNNNGG 2 cut(s) 144, 361
AflIII ACRYGT 1 cut(s) 28
AluBI AGCT 6 cut(s) 66, 118, 152, 484, 551, 572
AluI AGCT 6 cut(s) 66, 118, 152, 484, 551, 572
AlwNI CAGNNNCTG 1 cut(s) 500
ApeKI GCWGC 3 cut(s) 188, 365, 500
ApoI RAATTY 1 cut(s) 530
AspLEI GCGC 1 cut(s) 384
AsuHPI GGTGA 1 cut(s) 296
BbsI GAAGAC 1 cut(s) 516
BbvI GCAGC 3 cut(s) 200, 377, 487
BccI CCATC 3 cut(s) 199, 203, 319
BceAI ACGGC 1 cut(s) 386
BfaI CTAG 1 cut(s) 239
BfmI CTRYAG 1 cut(s) 270
BisI GCNGC 3 cut(s) 189, 366, 501
BlsI GCNGC 3 cut(s) 190, 367, 502
BmsI GCATC 1 cut(s) 487
BpiI GAAGAC 1 cut(s) 516
BpmI CTGGAG 1 cut(s) 30
BpuEI CTTGAG 1 cut(s) 525
BsaXI ACNNNNNCTCC 2 cut(s) 32, 62
Bsc4I CCNNNNNNNGG 2 cut(s) 144, 361
Bse1I ACTGG 1 cut(s) 301
Bse3DI GCAATG 2 cut(s) 255, 260
BseGI GGATG 2 cut(s) 214, 439
BseLI CCNNNNNNNGG 2 cut(s) 144, 361
BseMI GCAATG 2 cut(s) 255, 260
BseNI ACTGG 1 cut(s) 301
BseRI GAGGAG 1 cut(s) 257
BseXI GCAGC 3 cut(s) 200, 377, 487
BseYI CCCAGC 1 cut(s) 36
BsgI GTGCAG 2 cut(s) 337, 486
BslI CCNNNNNNNGG 2 cut(s) 144, 361
BsrDI GCAATG 2 cut(s) 255, 260
BsrI ACTGG 1 cut(s) 301
Bst4CI ACNGT 1 cut(s) 169
BstC8I GCNNGC 4 cut(s) 18, 386, 526, 574
BstF5I GGATG 2 cut(s) 214, 439
BstHHI GCGC 1 cut(s) 384
BstMWI GCNNNNNNNGC 1 cut(s) 460
BstNSI RCATGY 2 cut(s) 20, 32
BstSFI CTRYAG 1 cut(s) 270
BstV1I GCAGC 3 cut(s) 200, 377, 487
BstV2I GAAGAC 1 cut(s) 516
BstXI CCANNNNNNTGG 1 cut(s) 308
BtsCI GGATG 2 cut(s) 214, 439
Cac8I GCNNGC 4 cut(s) 18, 386, 526, 574
CaiI CAGNNNCTG 1 cut(s) 500
CfoI GCGC 1 cut(s) 384
CseI GACGC 1 cut(s) 357
Csp6I GTAC 1 cut(s) 422
CviAII CATG 6 cut(s) 17, 29, 163, 295, 348, 361
CviQI GTAC 1 cut(s) 422
FaeI CATG 6 cut(s) 20, 32, 166, 298, 351, 364
FalI AAGNNNNNCTT 2 cut(s) 102, 134
FatI CATG 6 cut(s) 16, 28, 162, 294, 347, 360
FauNDI CATATG 1 cut(s) 106
Fnu4HI GCNGC 3 cut(s) 189, 366, 501
FokI GGATG 2 cut(s) 221, 446
Fsp4HI GCNGC 3 cut(s) 189, 366, 501
FspBI CTAG 1 cut(s) 239
GlaI GCGC 1 cut(s) 383
GluI GCNGC 3 cut(s) 189, 366, 501
GsaI CCCAGC 1 cut(s) 40
GsuI CTGGAG 1 cut(s) 30
HgaI GACGC 1 cut(s) 357
HhaI GCGC 1 cut(s) 384
Hin1II CATG 6 cut(s) 20, 32, 166, 298, 351, 364
Hin6I GCGC 1 cut(s) 382
HinP1I GCGC 1 cut(s) 382
HinfI GANTC 1 cut(s) 512
HphI GGTGA 1 cut(s) 296
Hpy188I TCNGA 2 cut(s) 78, 407
Hpy188III TCNNGA 3 cut(s) 9, 395, 542
Hpy99I CGWCG 1 cut(s) 449
HpyAV CCTTC 2 cut(s) 53, 137
HpyCH4III ACNGT 1 cut(s) 169
HpyCH4IV ACGT 1 cut(s) 444
HpyCH4V TGCA 6 cut(s) 253, 318, 414, 503, 536, 557
HpyF10VI GCNNNNNNNGC 1 cut(s) 460
HpySE526I ACGT 1 cut(s) 444
Hsp92II CATG 6 cut(s) 20, 32, 166, 298, 351, 364
HspAI GCGC 1 cut(s) 382
LmnI GCTCC 2 cut(s) 63, 185
LpnPI CCDG 4 cut(s) 22, 304, 314, 487
Lsp1109I GCAGC 3 cut(s) 200, 377, 487
LweI GCATC 1 cut(s) 487
MaeI CTAG 1 cut(s) 239
MaeII ACGT 1 cut(s) 444
MaeIII GTNAC 2 cut(s) 158, 284
MboII GAAGA 2 cut(s) 210, 521
MluCI AATT 1 cut(s) 530
MlyI GAGTC 1 cut(s) 506
MnlI CCTC 7 cut(s) 166, 223, 235, 238, 424, 458, 549
MseI TTAA 3 cut(s) 225, 339, 357
MslI CAYNNNNRTG 1 cut(s) 167
MwoI GCNNNNNNNGC 1 cut(s) 460
NdeI CATATG 1 cut(s) 106
NlaIII CATG 6 cut(s) 20, 32, 166, 298, 351, 364
NmuCI GTSAC 2 cut(s) 158, 284
NspI RCATGY 2 cut(s) 20, 32
PaeI GCATGC 1 cut(s) 20
PciI ACATGT 1 cut(s) 28
PkrI GCNGC 3 cut(s) 190, 367, 502
PleI GAGTC 1 cut(s) 506
PpsI GAGTC 1 cut(s) 506
PscI ACATGT 1 cut(s) 28
PsiI TTATAA 1 cut(s) 377
PspFI CCCAGC 1 cut(s) 36
PstNI CAGNNNCTG 1 cut(s) 500
RsaI GTAC 1 cut(s) 423
RsaNI GTAC 1 cut(s) 422
RseI CAYNNNNRTG 1 cut(s) 167
SaqAI TTAA 3 cut(s) 225, 339, 357
SatI GCNGC 3 cut(s) 189, 366, 501
SchI GAGTC 1 cut(s) 506
SetI ASST 9 cut(s) 68, 120, 154, 357, 447, 486, 541, 553, 574
SfaNI GCATC 1 cut(s) 487
SfcI CTRYAG 1 cut(s) 270
SmiMI CAYNNNNRTG 1 cut(s) 167
SmlI CTYRAG 1 cut(s) 540
SmoI CTYRAG 1 cut(s) 540
SphI GCATGC 1 cut(s) 20
Sse9I AATT 1 cut(s) 530
SspMI CTAG 1 cut(s) 239
TaaI ACNGT 1 cut(s) 169
TaiI ACGT 1 cut(s) 447
TaqI TCGA 1 cut(s) 447
TasI AATT 1 cut(s) 530
TatI WGTACW 1 cut(s) 421
Tru1I TTAA 3 cut(s) 225, 339, 357
Tru9I TTAA 3 cut(s) 225, 339, 357
TseFI GTSAC 2 cut(s) 158, 284
TseI GCWGC 3 cut(s) 188, 365, 500
Tsp45I GTSAC 2 cut(s) 158, 284
TspDTI ATGAA 6 cut(s) 17, 123, 147, 276, 283, 450
XapI RAATTY 1 cut(s) 530
XceI RCATGY 2 cut(s) 20, 32
XspI CTAG 1 cut(s) 239
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.