pycom07g05170

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0018501
Physical Location & Seq
Reverse (-)
4425486 .. 4426826
1341 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1341 bp
ATGCTTCCATGGTTAGGTCACGGCCATATTTCTCCCTTCCTAGAGCTAGCCAAGAAACTTACCGATCGCAGAGATTTTCACATCCTTATTTGCTCCACACCGGTAAATCTCAGCTGCATCAAGCCCAAACTCCCTCAGAAATACTCTCACTGCATTGAGTTTGTGGAACTTCATCTTCCACACGATGAGTTGCCACCTCACTACCACACCACCAATGGCCTCCCACCCCATCTCATGCCCACTCTCAAAAAAGCCTTCGACATGTCCAGCGATAACTTCTCCCAAATCCTCAGTACCCTAAAACCAGATTTGCTCATATATGATTTTCTCCAGCCATGGGCACCCTCCCTAGCTTCGTCGCACAACATTCCGGCCGTCGAGTTCTTTACCACCAGTGCTGCCGTGATTTCATTTTATGTTCACCATCTCAAGAACCCTAATGTTCTATTCCCTTATCCTTCCATCTATCTTCGGGATTACGAAACTAAGAAGTTCAGCAGTGTGCTGGAATCTTCAGCAAATGGCATCAAGGACGTAGAACGCGCGCTGCTGTGCAGTGATCGGTCTCGTAAAATCATTTTGGTAAAGACTTCTGGAGAGATTGAATCAAAATATATTGATTCTCTCTCAAAGTTAATGGAGAAGAAGATTGTGCCCGTCGGTTCACTTGTTCAAGACCCAATGGATCAAAAAGTCGATGAGGAATCGTCGATCATCAAATGGCTAAACGAAAGGGAAAGAGCTTCAGTCGTGTTTGTGTCCTTCGGGAGCGAGTACTTTTTGTCCAAGGAGGAAATACAAGAGATAGCTCTTGGATTGGAGCTTAGCCAAGTGAGTTTCATTTGGGTTATTAGGTTTCCTAAGGAAGAGAAAAGTACCAGGGTTGAAGATGTTTTGCCAAAAGGGTTTGGGGAGAGGGTAGGGGAGAGGGGGATGATAGTGGAGGATTGGGCCCCACAGGCAAAAATATTGAAGCATTCTAGTGTTCGTGGGTTTGTGAGTCACTGTGGATGGAGCTCGGTGTTGGAGAGCATCAAGTTTGGTGTTCCGATTATAGCCATGCCTATGCAACTTGACCAGCCATTAAACGCCAAACTGGTGGAGGAGGTTGGCGTTGGTGTGGAGGTTATAAGAACCGGCGGAGGAGGCAGTTTACGACGGGAAGAGGTAGCGAAGGTGATCAGAGATGTGGTGGAGAAAATTGGAGAGGGTGTGAGGATAAAGGCATTGGAATTAAGTGACAAAATGAAGAAGAAAGAGGATGAAGAGATGGATGGGGTGGCGGAGGAGTTGATGCAAATTTGTACGACGACAAGGGAATCAACTAGTACTGACTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

447

Amino Acids

50.35

Weight (kDa)

5.92

Isoelectric Point (pI)

47.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 1 - 221 6.4e-07 Glycosyltransferase, N-terminal domain
UDPGT PF00201 243 - 377 1.2e-20 UDP-glucoronosyl and UDP-glucosyl transferase
EryCIII-like_C PF06722 316 - 396 1.1e-06 Erythromycin biosynthesis protein CIII-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1130
AccB1I GGYRCC 1 cut(s) 340
AccII CGCG 2 cut(s) 543, 545
AciI CCGC 2 cut(s) 1140, 1283
AclWI GGATC 1 cut(s) 693
AcoI YGGCCR 2 cut(s) 22, 372
AcsI RAATTY 1 cut(s) 1299
AcuI CTGAAG 2 cut(s) 498, 729
AfaI GTAC 5 cut(s) 295, 776, 877, 1306, 1330
AfiI CCNNNNNNNGG 2 cut(s) 14, 337
AflIII ACRYGT 1 cut(s) 261
AgeI ACCGGT 1 cut(s) 100
AgsI TTSAA 4 cut(s) 605, 674, 887, 973
AhlI ACTAGT 1 cut(s) 1325
AjnI CCWGG 1 cut(s) 878
AluBI AGCT 7 cut(s) 46, 114, 353, 743, 809, 823, 1017
AluI AGCT 7 cut(s) 46, 114, 353, 743, 809, 823, 1017
Alw21I GWGCWC 1 cut(s) 1019
Alw26I GTCTC 1 cut(s) 570
AlwI GGATC 1 cut(s) 693
AoxI GGCC 4 cut(s) 22, 217, 372, 951
ApaI GGGCCC 1 cut(s) 955
ApeKI GCWGC 3 cut(s) 114, 398, 547
ApoI RAATTY 1 cut(s) 1299
AsiGI ACCGGT 1 cut(s) 100
AspLEI GCGC 2 cut(s) 545, 547
AspS9I GGNCC 2 cut(s) 951, 952
AsuHPI GGTGA 2 cut(s) 413, 1189
AsuNHI GCTAGC 1 cut(s) 46
AxyI CCTNAGG 1 cut(s) 861
BaeGI GKGCMC 3 cut(s) 343, 657, 955
BanI GGYRCC 1 cut(s) 340
BanII GRGCYC 2 cut(s) 955, 1019
Bbv12I GWGCWC 1 cut(s) 1019
BbvI GCAGC 3 cut(s) 101, 385, 534
BccI CCATC 6 cut(s) 237, 432, 470, 1005, 1264, 1268
BceAI ACGGC 3 cut(s) 37, 359, 386
BciT130I CCWGG 1 cut(s) 880
BclI TGATCA 1 cut(s) 1179
BcoDI GTCTC 1 cut(s) 570
BcuI ACTAGT 1 cut(s) 1325
BfaI CTAG 5 cut(s) 41, 47, 350, 981, 1326
BglI GCCNNNNNGGC 1 cut(s) 959
BisI GCNGC 3 cut(s) 115, 399, 548
BlpI GCTNAGC 1 cut(s) 824
BlsI GCNGC 3 cut(s) 116, 400, 549
BmcAI AGTACT 2 cut(s) 776, 1330
Bme1390I CCNGG 1 cut(s) 880
BmgT120I GGNCC 2 cut(s) 951, 952
BmiI GGNNCC 3 cut(s) 342, 953, 954
BmrFI CCNGG 1 cut(s) 880
BmsI GCATC 4 cut(s) 126, 534, 1041, 1284
BmtI GCTAGC 1 cut(s) 50
BpmI CTGGAG 2 cut(s) 314, 615
Bpu1102I GCTNAGC 1 cut(s) 824
BpuEI CTTGAG 1 cut(s) 413
BsaI GGTCTC 1 cut(s) 570
BsaJI CCNNGG 4 cut(s) 8, 335, 786, 879
BsaWI WCCGGW 1 cut(s) 100
BsaXI ACNNNNNCTCC 2 cut(s) 1197, 1227
Bsc4I CCNNNNNNNGG 2 cut(s) 14, 337
Bse118I RCCGGY 2 cut(s) 100, 1136
Bse1I ACTGG 2 cut(s) 393, 1101
Bse21I CCTNAGG 1 cut(s) 861
BseBI CCWGG 1 cut(s) 880
BseDI CCNNGG 4 cut(s) 8, 335, 786, 879
BseGI GGATG 5 cut(s) 81, 939, 1016, 1267, 1279
BseLI CCNNNNNNNGG 2 cut(s) 14, 337
BseMII CTCAG 3 cut(s) 124, 149, 304
BseNI ACTGG 2 cut(s) 393, 1101
BsePI GCGCGC 1 cut(s) 543
BseRI GAGGAG 3 cut(s) 1118, 1158, 1301
BseSI GKGCMC 3 cut(s) 343, 657, 955
BseX3I CGGCCG 1 cut(s) 372
BseXI GCAGC 3 cut(s) 101, 385, 534
BsgI GTGCAG 1 cut(s) 574
Bsh1236I CGCG 2 cut(s) 543, 545
Bsh1285I CGRYCG 2 cut(s) 67, 375
BshFI GGCC 4 cut(s) 24, 219, 374, 953
BshNI GGYRCC 1 cut(s) 340
BshTI ACCGGT 1 cut(s) 100
BsiEI CGRYCG 2 cut(s) 67, 375
BsiHKAI GWGCWC 1 cut(s) 1019
BsiSI CCGG 3 cut(s) 101, 371, 1137
BslI CCNNNNNNNGG 2 cut(s) 14, 337
BsmAI GTCTC 1 cut(s) 570
BsmI GAATGC 1 cut(s) 976
BsnI GGCC 4 cut(s) 24, 219, 374, 953
Bso31I GGTCTC 1 cut(s) 570
Bsp120I GGGCCC 1 cut(s) 951
Bsp1286I GDGCHC 4 cut(s) 343, 657, 955, 1019
Bsp143I GATC 5 cut(s) 64, 559, 685, 711, 1179
Bsp1720I GCTNAGC 1 cut(s) 824
Bsp19I CCATGG 2 cut(s) 8, 335
BspACI CCGC 2 cut(s) 1140, 1283
BspANI GGCC 4 cut(s) 24, 219, 374, 953
BspCNI CTCAG 3 cut(s) 123, 148, 303
BspFNI CGCG 2 cut(s) 543, 545
BspLI GGNNCC 3 cut(s) 342, 953, 954
BspOI GCTAGC 1 cut(s) 50
BspPI GGATC 1 cut(s) 693
BspT107I GGYRCC 1 cut(s) 340
BspTNI GGTCTC 1 cut(s) 570
BsrFI RCCGGY 2 cut(s) 100, 1136
BsrI ACTGG 2 cut(s) 393, 1101
BssAI RCCGGY 2 cut(s) 100, 1136
BssECI CCNNGG 4 cut(s) 8, 335, 786, 879
BssHII GCGCGC 1 cut(s) 543
BssMI GATC 5 cut(s) 64, 559, 685, 711, 1179
BssT1I CCWWGG 3 cut(s) 8, 335, 786
Bst2UI CCWGG 1 cut(s) 880
Bst4CI ACNGT 1 cut(s) 1007
Bst6I CTCTTC 3 cut(s) 861, 1158, 1260
BstC8I GCNNGC 2 cut(s) 48, 545
BstDEI CTNAG 6 cut(s) 110, 135, 290, 486, 824, 861
BstDSI CCRYGG 2 cut(s) 8, 335
BstF5I GGATG 5 cut(s) 81, 939, 1016, 1267, 1279
BstFNI CGCG 2 cut(s) 543, 545
BstHHI GCGC 2 cut(s) 545, 547
BstKTI GATC 5 cut(s) 67, 562, 688, 714, 1182
BstMAI GTCTC 1 cut(s) 570
BstMBI GATC 5 cut(s) 64, 559, 685, 711, 1179
BstMCI CGRYCG 2 cut(s) 67, 375
BstMWI GCNNNNNNNGC 2 cut(s) 959, 1146
BstNI CCWGG 1 cut(s) 880
BstNSI RCATGY 1 cut(s) 265
BstSCI CCNGG 1 cut(s) 878
BstSLI GKGCMC 3 cut(s) 343, 657, 955
BstUI CGCG 2 cut(s) 543, 545
BstV1I GCAGC 3 cut(s) 101, 385, 534
BstXI CCANNNNNNTGG 1 cut(s) 1099
BstZI CGGCCG 1 cut(s) 372
Bsu36I CCTNAGG 1 cut(s) 861
BsuRI GGCC 4 cut(s) 24, 219, 374, 953
BtgI CCRYGG 2 cut(s) 8, 335
BtsCI GGATG 5 cut(s) 81, 939, 1016, 1267, 1279
BtsI GCAGTG 3 cut(s) 148, 505, 562
BtsIMutI CAGTG 5 cut(s) 148, 400, 505, 562, 1003
Cac8I GCNNGC 2 cut(s) 48, 545
CfoI GCGC 2 cut(s) 545, 547
Cfr10I RCCGGY 2 cut(s) 100, 1136
Cfr13I GGNCC 2 cut(s) 951, 952
Csp6I GTAC 5 cut(s) 294, 775, 876, 1305, 1329
CspAI ACCGGT 1 cut(s) 100
CviAII CATG 5 cut(s) 9, 235, 262, 336, 1060
CviQI GTAC 5 cut(s) 294, 775, 876, 1305, 1329
DdeI CTNAG 6 cut(s) 110, 135, 290, 486, 824, 861
DpnI GATC 5 cut(s) 66, 561, 687, 713, 1181
DpnII GATC 5 cut(s) 64, 559, 685, 711, 1179
EaeI YGGCCR 2 cut(s) 22, 372
EagI CGGCCG 1 cut(s) 372
Eam1104I CTCTTC 3 cut(s) 861, 1158, 1260
EarI CTCTTC 3 cut(s) 861, 1158, 1260
EciI GGCGGA 2 cut(s) 1155, 1298
Ecl136II GAGCTC 1 cut(s) 1017
EclXI CGGCCG 1 cut(s) 372
Eco130I CCWWGG 3 cut(s) 8, 335, 786
Eco24I GRGCYC 2 cut(s) 955, 1019
Eco31I GGTCTC 1 cut(s) 570
Eco52I CGGCCG 1 cut(s) 372
Eco53kI GAGCTC 1 cut(s) 1017
Eco57I CTGAAG 2 cut(s) 498, 729
Eco81I CCTNAGG 1 cut(s) 861
EcoICRI GAGCTC 1 cut(s) 1017
EcoO109I RGGNCCY 1 cut(s) 952
EcoRII CCWGG 1 cut(s) 878
EcoT14I CCWWGG 3 cut(s) 8, 335, 786
EcoT38I GRGCYC 2 cut(s) 955, 1019
ErhI CCWWGG 3 cut(s) 8, 335, 786
FaeI CATG 5 cut(s) 12, 238, 265, 339, 1063
FatI CATG 5 cut(s) 8, 234, 261, 335, 1059
FbaI TGATCA 1 cut(s) 1179
Fnu4HI GCNGC 3 cut(s) 115, 399, 548
FokI GGATG 5 cut(s) 68, 946, 1023, 1274, 1286
FriOI GRGCYC 2 cut(s) 955, 1019
Fsp4HI GCNGC 3 cut(s) 115, 399, 548
FspBI CTAG 5 cut(s) 41, 47, 350, 981, 1326
GlaI GCGC 2 cut(s) 544, 546
GluI GCNGC 3 cut(s) 115, 399, 548
GsuI CTGGAG 2 cut(s) 314, 615
HaeIII GGCC 4 cut(s) 24, 219, 374, 953
HapII CCGG 3 cut(s) 101, 371, 1137
HhaI GCGC 2 cut(s) 545, 547
Hin1II CATG 5 cut(s) 12, 238, 265, 339, 1063
Hin6I GCGC 2 cut(s) 543, 545
HinP1I GCGC 2 cut(s) 543, 545
HinfI GANTC 6 cut(s) 509, 605, 620, 704, 1000, 1319
HpaII CCGG 3 cut(s) 101, 371, 1137
HphI GGTGA 2 cut(s) 413, 1189
Hpy166II GTNNAC 3 cut(s) 421, 665, 1154
Hpy188I TCNGA 3 cut(s) 138, 1050, 1184
Hpy188III TCNNGA 5 cut(s) 430, 473, 594, 674, 766
Hpy8I GTNNAC 3 cut(s) 421, 665, 1154
Hpy99I CGWCG 6 cut(s) 361, 380, 662, 712, 1161, 1312
HpyAV CCTTC 5 cut(s) 46, 265, 468, 772, 1168
HpyCH4III ACNGT 1 cut(s) 1007
HpyCH4IV ACGT 1 cut(s) 534
HpyCH4V TGCA 5 cut(s) 117, 153, 555, 1069, 1297
HpyF10VI GCNNNNNNNGC 2 cut(s) 959, 1146
HpyF3I CTNAG 6 cut(s) 110, 135, 290, 486, 824, 861
HpySE526I ACGT 1 cut(s) 534
Hsp92II CATG 5 cut(s) 12, 238, 265, 339, 1063
HspAI GCGC 2 cut(s) 543, 545
Ksp22I TGATCA 1 cut(s) 1179
Kzo9I GATC 5 cut(s) 64, 559, 685, 711, 1179
LmnI GCTCC 4 cut(s) 98, 768, 820, 1014
Lsp1109I GCAGC 3 cut(s) 101, 385, 534
LweI GCATC 4 cut(s) 126, 534, 1041, 1284
MaeI CTAG 5 cut(s) 41, 47, 350, 981, 1326
MaeII ACGT 1 cut(s) 534
MaeIII GTNAC 3 cut(s) 17, 1001, 1238
MalI GATC 5 cut(s) 66, 561, 687, 713, 1181
MboI GATC 5 cut(s) 64, 559, 685, 711, 1179
MhlI GDGCHC 4 cut(s) 343, 657, 955, 1019
MluCI AATT 3 cut(s) 1200, 1232, 1299
MlyI GAGTC 1 cut(s) 1009
MmeI TCCRAC 1 cut(s) 1005
MseI TTAA 3 cut(s) 635, 1085, 1235
MslI CAYNNNNRTG 2 cut(s) 981, 1064
MspA1I CMGCKG 1 cut(s) 114
MspI CCGG 3 cut(s) 101, 371, 1137
MspR9I CCNGG 1 cut(s) 880
Mva1269I GAATGC 1 cut(s) 976
MvaI CCWGG 1 cut(s) 880
MvnI CGCG 2 cut(s) 543, 545
MwoI GCNNNNNNNGC 2 cut(s) 959, 1146
NcoI CCATGG 2 cut(s) 8, 335
NdeII GATC 5 cut(s) 64, 559, 685, 711, 1179
NheI GCTAGC 1 cut(s) 46
NlaIII CATG 5 cut(s) 12, 238, 265, 339, 1063
NlaIV GGNNCC 3 cut(s) 342, 953, 954
NmuCI GTSAC 3 cut(s) 17, 1001, 1238
NspI RCATGY 1 cut(s) 265
PauI GCGCGC 1 cut(s) 543
PciI ACATGT 1 cut(s) 261
PctI GAATGC 1 cut(s) 976
PfeI GAWTC 5 cut(s) 509, 605, 620, 704, 1319
PinAI ACCGGT 1 cut(s) 100
PkrI GCNGC 3 cut(s) 116, 400, 549
Ple19I CGATCG 1 cut(s) 67
PleI GAGTC 1 cut(s) 1008
PpsI GAGTC 1 cut(s) 1008
PscI ACATGT 1 cut(s) 261
PsiI TTATAA 1 cut(s) 1130
Psp124BI GAGCTC 1 cut(s) 1019
Psp6I CCWGG 1 cut(s) 878
PspGI CCWGG 1 cut(s) 878
PspN4I GGNNCC 3 cut(s) 342, 953, 954
PspOMI GGGCCC 1 cut(s) 951
PspPI GGNCC 2 cut(s) 951, 952
PteI GCGCGC 1 cut(s) 543
PvuI CGATCG 1 cut(s) 67
PvuII CAGCTG 1 cut(s) 114
RsaI GTAC 5 cut(s) 295, 776, 877, 1306, 1330
RsaNI GTAC 5 cut(s) 294, 775, 876, 1305, 1329
RseI CAYNNNNRTG 2 cut(s) 981, 1064
SacI GAGCTC 1 cut(s) 1019
SaqAI TTAA 3 cut(s) 635, 1085, 1235
SatI GCNGC 3 cut(s) 115, 399, 548
Sau3AI GATC 5 cut(s) 64, 559, 685, 711, 1179
Sau96I GGNCC 2 cut(s) 951, 952
ScaI AGTACT 2 cut(s) 776, 1330
SchI GAGTC 1 cut(s) 1009
ScrFI CCNGG 1 cut(s) 880
SduI GDGCHC 4 cut(s) 343, 657, 955, 1019
SfaNI GCATC 4 cut(s) 126, 534, 1041, 1284
SmiMI CAYNNNNRTG 2 cut(s) 981, 1064
SmlI CTYRAG 1 cut(s) 428
SmoI CTYRAG 1 cut(s) 428
SpeI ACTAGT 1 cut(s) 1325
Sse9I AATT 3 cut(s) 1200, 1232, 1299
SsiI CCGC 2 cut(s) 1140, 1283
SspI AATATT 1 cut(s) 969
SspMI CTAG 5 cut(s) 41, 47, 350, 981, 1326
SstI GAGCTC 1 cut(s) 1019
StyD4I CCNGG 1 cut(s) 878
StyI CCWWGG 3 cut(s) 8, 335, 786
TaaI ACNGT 1 cut(s) 1007
TaiI ACGT 1 cut(s) 537
TaqI TCGA 4 cut(s) 258, 378, 696, 710
TaqII GACCGA 1 cut(s) 552
TasI AATT 3 cut(s) 1200, 1232, 1299
TatI WGTACW 2 cut(s) 774, 1328
TfiI GAWTC 5 cut(s) 509, 605, 620, 704, 1319
Tru1I TTAA 3 cut(s) 635, 1085, 1235
Tru9I TTAA 3 cut(s) 635, 1085, 1235
TscAI CASTG 5 cut(s) 155, 400, 505, 562, 1010
TseFI GTSAC 3 cut(s) 17, 1001, 1238
TseI GCWGC 3 cut(s) 114, 398, 547
Tsp45I GTSAC 3 cut(s) 17, 1001, 1238
TspDTI ATGAA 5 cut(s) 161, 399, 829, 1262, 1278
TspRI CASTG 5 cut(s) 155, 400, 505, 562, 1010
XapI RAATTY 1 cut(s) 1299
XceI RCATGY 1 cut(s) 265
XcmI CCANNNNNNNNNTGG 1 cut(s) 212
XspI CTAG 5 cut(s) 41, 47, 350, 981, 1326
ZrmI AGTACT 2 cut(s) 776, 1330
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.