pycom07g05190

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0018501
Physical Location & Seq
Reverse (-)
4460075 .. 4461460
1386 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1386 bp
ATGCTTTATCCTGATCAGAACAGAAGCATTAGCATTCTTATGCTTCCATGGTTAGGTCACGGCCATATTTCTCCCTTCCTAGAGCTAGCCAAGAAACTCACCAGCCACAGAGATTTTCACATCTTCATTTGCTCCACACCTGTTAATCTCAGCTCCATCAAGCGCAAACTACCCAAGAAATACTCTCACTTCATTGAGTTTGTGGAACTTCATCTTCCACACGATGAGTTGCCACCTCACTACCACACCACCAATGGCCTCCCACCCCATCTCATGCCCACTCTCAAAAAAGCCTTCGACATGTCCAGCGATAACTTCTCCCACATCCTCAAAACCCTAAAACCAGATTTGCTCATATATGATTTTCTCCAGCCATGGGCACCGTCCCTAGCTTTGTCGCACAACATTCCGGCCGTCGAGTTCACCACCACCAGTGCTGCCTCGATGTCACTTTTTCTTCACCATCACAAGAACCCTAATGTTCAATTCCCTTATCCTTCCATCTATCTTCGGGATTACGAAACTAAGGAGTTCAGCAATCTACTAGAATCTTCAGCAAATGGCATCACGAACGTAGAACGCGTACTACTGTGCAGTGATCTGTCTCGTAACATCATTTTAGTAAAGACTTCTGGAGAGATTGAATCAAAGTGTGTTGATTATCTCTCCCAGTTAACGGAGAAGAAGATTGTGCCCGTCGGTTCACTTGTTCAAGACCCAATGGATCAACAATTAGATGAGGAATCGTCGATCATCAAATGGCTAAACGAAAGGGAAAGAGCTTCAGTCGTGTTTGTGTCCTTCGGGAGCGAGTACTTTTTGTCCAAGGAGGAAATACAAGAGATAGCTCTTGGATTGGAGCTTAGCCAAGTGAGTTTCATTTGGGTTATTAGGTTTCCTAAGGAAGATAAAAGTACTAGGGTTGAAGATGCTTTGCCAAAAGGGTTTGGGGAGAGGGTAGGAGAGAGGGGAATGATAGTGGACGATTGGACCCCACAGGCAAAAATATTGAAGCATTCTAGTGTTGGTGGGTTTGTGAGTCACTGTGGATGGAGCTCGGTGTTGGAGAGCATCAAGTTTGGTGTTCCGATTATAGCCATGCCTATGCAACTTGACCAGCCAGTAAACGCCAGACTGGTGGTGGAGGTTGGCGTTGGTGTGGAGGTTATAAGAACCGGCGGAGGAGGTAGTTTGCAACGGGAAGAGGTGGCGAAGGTGATCAGAGATGTGGTGGTGGAGAAAATTGGAGAGGGTGTGATGATAAAGGCATTCGAATTAAGAGACAACATGAAGAAGAAAGATGATGAAGAGATGGATAGGGTGGTGGAGGAGTTGATGCAGCTTTGTACGGCGACGACAAGGGAATCAATTAGTAACTACTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

462

Amino Acids

52.22

Weight (kDa)

5.81

Isoelectric Point (pI)

44.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 9 - 234 4.2e-08 Glycosyltransferase, N-terminal domain
UDPGT PF00201 260 - 391 1.3e-19 UDP-glucoronosyl and UDP-glucosyl transferase
EryCIII-like_C PF06722 329 - 410 2.5e-07 Erythromycin biosynthesis protein CIII-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1169
AccB1I GGYRCC 1 cut(s) 379
AccII CGCG 1 cut(s) 582
AciI CCGC 1 cut(s) 1179
AclWI GGATC 1 cut(s) 732
AcoI YGGCCR 2 cut(s) 61, 411
AcuI CTGAAG 2 cut(s) 537, 768
AfaI GTAC 4 cut(s) 585, 815, 916, 1348
AfiI CCNNNNNNNGG 3 cut(s) 53, 376, 676
AflIII ACRYGT 2 cut(s) 300, 580
AgsI TTSAA 5 cut(s) 485, 644, 713, 926, 1012
AluBI AGCT 8 cut(s) 85, 153, 392, 782, 848, 862, 1056, 1342
AluI AGCT 8 cut(s) 85, 153, 392, 782, 848, 862, 1056, 1342
Alw21I GWGCWC 1 cut(s) 1058
Alw26I GTCTC 2 cut(s) 609, 1275
AlwI GGATC 1 cut(s) 732
AoxI GGCC 3 cut(s) 61, 256, 411
ApeKI GCWGC 2 cut(s) 437, 1339
AspLEI GCGC 1 cut(s) 165
AspS9I GGNCC 1 cut(s) 990
AsuHPI GGTGA 4 cut(s) 91, 415, 452, 1228
AsuII TTCGAA 1 cut(s) 1272
AsuNHI GCTAGC 1 cut(s) 85
AvaII GGWCC 1 cut(s) 990
AxyI CCTNAGG 1 cut(s) 900
BaeGI GKGCMC 2 cut(s) 382, 696
BanI GGYRCC 1 cut(s) 379
BanII GRGCYC 1 cut(s) 1058
Bbv12I GWGCWC 1 cut(s) 1058
BbvI GCAGC 2 cut(s) 424, 1351
BccI CCATC 6 cut(s) 164, 276, 471, 509, 1044, 1306
BceAI ACGGC 3 cut(s) 76, 398, 1365
BclI TGATCA 2 cut(s) 13, 1218
BcoDI GTCTC 2 cut(s) 609, 1275
BfaI CTAG 6 cut(s) 80, 86, 389, 545, 918, 1020
BisI GCNGC 2 cut(s) 438, 1340
BlpI GCTNAGC 1 cut(s) 863
BlsI GCNGC 2 cut(s) 439, 1341
BmcAI AGTACT 2 cut(s) 815, 916
Bme18I GGWCC 1 cut(s) 990
BmgT120I GGNCC 1 cut(s) 990
BmiI GGNNCC 2 cut(s) 381, 992
BmrI ACTGGG 1 cut(s) 664
BmsI GCATC 4 cut(s) 573, 919, 1080, 1326
BmtI GCTAGC 1 cut(s) 89
BmuI ACTGGG 1 cut(s) 664
BpmI CTGGAG 2 cut(s) 353, 654
Bpu1102I GCTNAGC 1 cut(s) 863
Bpu14I TTCGAA 1 cut(s) 1272
BsaJI CCNNGG 3 cut(s) 47, 374, 825
BsaXI ACNNNNNCTCC 2 cut(s) 1239, 1269
Bsc4I CCNNNNNNNGG 3 cut(s) 53, 376, 676
Bse118I RCCGGY 1 cut(s) 1175
Bse1I ACTGG 4 cut(s) 432, 670, 1121, 1140
Bse21I CCTNAGG 1 cut(s) 900
BseDI CCNNGG 3 cut(s) 47, 374, 825
BseGI GGATG 2 cut(s) 324, 1055
BseLI CCNNNNNNNGG 3 cut(s) 53, 376, 676
BseMII CTCAG 1 cut(s) 163
BseNI ACTGG 4 cut(s) 432, 670, 1121, 1140
BseRI GAGGAG 2 cut(s) 1197, 1343
BseSI GKGCMC 2 cut(s) 382, 696
BseX3I CGGCCG 1 cut(s) 411
BseXI GCAGC 2 cut(s) 424, 1351
BsgI GTGCAG 1 cut(s) 613
Bsh1236I CGCG 1 cut(s) 582
Bsh1285I CGRYCG 1 cut(s) 414
BshFI GGCC 3 cut(s) 63, 258, 413
BshNI GGYRCC 1 cut(s) 379
BsiEI CGRYCG 1 cut(s) 414
BsiHKAI GWGCWC 1 cut(s) 1058
BsiSI CCGG 2 cut(s) 410, 1176
BslFI GGGAC 1 cut(s) 370
BslI CCNNNNNNNGG 3 cut(s) 53, 376, 676
BsmAI GTCTC 2 cut(s) 609, 1275
BsmFI GGGAC 1 cut(s) 370
BsmI GAATGC 3 cut(s) 33, 1015, 1268
BsnI GGCC 3 cut(s) 63, 258, 413
Bsp119I TTCGAA 1 cut(s) 1272
Bsp1286I GDGCHC 3 cut(s) 382, 696, 1058
Bsp143I GATC 5 cut(s) 13, 598, 724, 750, 1218
Bsp1720I GCTNAGC 1 cut(s) 863
Bsp19I CCATGG 2 cut(s) 47, 374
BspACI CCGC 1 cut(s) 1179
BspANI GGCC 3 cut(s) 63, 258, 413
BspCNI CTCAG 1 cut(s) 162
BspFNI CGCG 1 cut(s) 582
BspLI GGNNCC 2 cut(s) 381, 992
BspOI GCTAGC 1 cut(s) 89
BspPI GGATC 1 cut(s) 732
BspT104I TTCGAA 1 cut(s) 1272
BspT107I GGYRCC 1 cut(s) 379
BsrFI RCCGGY 1 cut(s) 1175
BsrI ACTGG 4 cut(s) 432, 670, 1121, 1140
BssAI RCCGGY 1 cut(s) 1175
BssECI CCNNGG 3 cut(s) 47, 374, 825
BssMI GATC 5 cut(s) 13, 598, 724, 750, 1218
BssT1I CCWWGG 3 cut(s) 47, 374, 825
Bst4CI ACNGT 3 cut(s) 384, 591, 1046
Bst6I CTCTTC 2 cut(s) 1197, 1302
BstBI TTCGAA 1 cut(s) 1272
BstC8I GCNNGC 1 cut(s) 87
BstDEI CTNAG 4 cut(s) 149, 525, 863, 900
BstDSI CCRYGG 2 cut(s) 47, 374
BstF5I GGATG 2 cut(s) 324, 1055
BstFNI CGCG 1 cut(s) 582
BstHHI GCGC 1 cut(s) 165
BstKTI GATC 5 cut(s) 16, 601, 727, 753, 1221
BstMAI GTCTC 2 cut(s) 609, 1275
BstMBI GATC 5 cut(s) 13, 598, 724, 750, 1218
BstMCI CGRYCG 1 cut(s) 414
BstNSI RCATGY 1 cut(s) 304
BstSLI GKGCMC 2 cut(s) 382, 696
BstUI CGCG 1 cut(s) 582
BstV1I GCAGC 2 cut(s) 424, 1351
BstXI CCANNNNNNTGG 1 cut(s) 1138
BstZI CGGCCG 1 cut(s) 411
Bsu36I CCTNAGG 1 cut(s) 900
BsuRI GGCC 3 cut(s) 63, 258, 413
BtgI CCRYGG 2 cut(s) 47, 374
BtsCI GGATG 2 cut(s) 324, 1055
BtsI GCAGTG 1 cut(s) 601
BtsIMutI CAGTG 3 cut(s) 439, 601, 1042
Cac8I GCNNGC 1 cut(s) 87
CfoI GCGC 1 cut(s) 165
Cfr10I RCCGGY 1 cut(s) 1175
Cfr13I GGNCC 1 cut(s) 990
Csp6I GTAC 4 cut(s) 584, 814, 915, 1347
CviAII CATG 6 cut(s) 48, 274, 301, 375, 1099, 1288
CviQI GTAC 4 cut(s) 584, 814, 915, 1347
DdeI CTNAG 4 cut(s) 149, 525, 863, 900
DpnI GATC 5 cut(s) 15, 600, 726, 752, 1220
DpnII GATC 5 cut(s) 13, 598, 724, 750, 1218
EaeI YGGCCR 2 cut(s) 61, 411
EagI CGGCCG 1 cut(s) 411
Eam1104I CTCTTC 2 cut(s) 1197, 1302
EarI CTCTTC 2 cut(s) 1197, 1302
EciI GGCGGA 1 cut(s) 1194
Ecl136II GAGCTC 1 cut(s) 1056
EclXI CGGCCG 1 cut(s) 411
Eco130I CCWWGG 3 cut(s) 47, 374, 825
Eco24I GRGCYC 1 cut(s) 1058
Eco47I GGWCC 1 cut(s) 990
Eco52I CGGCCG 1 cut(s) 411
Eco53kI GAGCTC 1 cut(s) 1056
Eco57I CTGAAG 2 cut(s) 537, 768
Eco81I CCTNAGG 1 cut(s) 900
EcoICRI GAGCTC 1 cut(s) 1056
EcoT14I CCWWGG 3 cut(s) 47, 374, 825
EcoT38I GRGCYC 1 cut(s) 1058
ErhI CCWWGG 3 cut(s) 47, 374, 825
FaeI CATG 6 cut(s) 51, 277, 304, 378, 1102, 1291
FaqI GGGAC 1 cut(s) 370
FatI CATG 6 cut(s) 47, 273, 300, 374, 1098, 1287
FbaI TGATCA 2 cut(s) 13, 1218
Fnu4HI GCNGC 2 cut(s) 438, 1340
FokI GGATG 2 cut(s) 311, 1062
FriOI GRGCYC 1 cut(s) 1058
Fsp4HI GCNGC 2 cut(s) 438, 1340
FspBI CTAG 6 cut(s) 80, 86, 389, 545, 918, 1020
GlaI GCGC 1 cut(s) 164
GluI GCNGC 2 cut(s) 438, 1340
GsuI CTGGAG 2 cut(s) 353, 654
HaeIII GGCC 3 cut(s) 63, 258, 413
HapII CCGG 2 cut(s) 410, 1176
HhaI GCGC 1 cut(s) 165
Hin1II CATG 6 cut(s) 51, 277, 304, 378, 1102, 1291
Hin6I GCGC 1 cut(s) 163
HinP1I GCGC 1 cut(s) 163
HincII GTYRAC 1 cut(s) 675
HindII GTYRAC 1 cut(s) 675
HinfI GANTC 5 cut(s) 548, 644, 743, 1039, 1364
HpaI GTTAAC 1 cut(s) 675
HpaII CCGG 2 cut(s) 410, 1176
HphI GGTGA 4 cut(s) 91, 415, 452, 1228
Hpy166II GTNNAC 5 cut(s) 423, 675, 704, 982, 1126
Hpy188I TCNGA 3 cut(s) 18, 1089, 1223
Hpy188III TCNNGA 6 cut(s) 11, 512, 568, 633, 713, 805
Hpy8I GTNNAC 5 cut(s) 423, 675, 704, 982, 1126
Hpy99I CGWCG 4 cut(s) 419, 701, 751, 1357
HpyAV CCTTC 5 cut(s) 85, 304, 507, 811, 1207
HpyCH4III ACNGT 3 cut(s) 384, 591, 1046
HpyCH4IV ACGT 1 cut(s) 573
HpyCH4V TGCA 4 cut(s) 594, 1108, 1195, 1339
HpyF3I CTNAG 4 cut(s) 149, 525, 863, 900
HpySE526I ACGT 1 cut(s) 573
Hsp92II CATG 6 cut(s) 51, 277, 304, 378, 1102, 1291
HspAI GCGC 1 cut(s) 163
Ksp22I TGATCA 2 cut(s) 13, 1218
KspAI GTTAAC 1 cut(s) 675
Kzo9I GATC 5 cut(s) 13, 598, 724, 750, 1218
LmnI GCTCC 5 cut(s) 137, 158, 807, 859, 1053
Lsp1109I GCAGC 2 cut(s) 424, 1351
LweI GCATC 4 cut(s) 573, 919, 1080, 1326
MaeI CTAG 6 cut(s) 80, 86, 389, 545, 918, 1020
MaeII ACGT 1 cut(s) 573
MaeIII GTNAC 5 cut(s) 56, 447, 608, 1040, 1373
MalI GATC 5 cut(s) 15, 600, 726, 752, 1220
MboI GATC 5 cut(s) 13, 598, 724, 750, 1218
MhlI GDGCHC 3 cut(s) 382, 696, 1058
MluCI AATT 5 cut(s) 485, 731, 1242, 1274, 1368
MluI ACGCGT 1 cut(s) 580
MlyI GAGTC 1 cut(s) 1048
MmeI TCCRAC 1 cut(s) 1044
MseI TTAA 4 cut(s) 144, 674, 1277, 1384
MslI CAYNNNNRTG 3 cut(s) 38, 1020, 1103
MspI CCGG 2 cut(s) 410, 1176
Mva1269I GAATGC 3 cut(s) 33, 1015, 1268
MvnI CGCG 1 cut(s) 582
NcoI CCATGG 2 cut(s) 47, 374
NdeII GATC 5 cut(s) 13, 598, 724, 750, 1218
NheI GCTAGC 1 cut(s) 85
NlaIII CATG 6 cut(s) 51, 277, 304, 378, 1102, 1291
NlaIV GGNNCC 2 cut(s) 381, 992
NmuCI GTSAC 3 cut(s) 56, 447, 1040
NspI RCATGY 1 cut(s) 304
NspV TTCGAA 1 cut(s) 1272
PciI ACATGT 1 cut(s) 300
PcsI WCGNNNNNNNCGW 1 cut(s) 579
PctI GAATGC 3 cut(s) 33, 1015, 1268
PfeI GAWTC 4 cut(s) 548, 644, 743, 1364
PkrI GCNGC 2 cut(s) 439, 1341
PleI GAGTC 1 cut(s) 1047
PpsI GAGTC 1 cut(s) 1047
PscI ACATGT 1 cut(s) 300
PsiI TTATAA 1 cut(s) 1169
Psp124BI GAGCTC 1 cut(s) 1058
PspN4I GGNNCC 2 cut(s) 381, 992
PspPI GGNCC 1 cut(s) 990
PsrI GAACNNNNNNTAC 2 cut(s) 570, 602
RsaI GTAC 4 cut(s) 585, 815, 916, 1348
RsaNI GTAC 4 cut(s) 584, 814, 915, 1347
RseI CAYNNNNRTG 3 cut(s) 38, 1020, 1103
SacI GAGCTC 1 cut(s) 1058
SaqAI TTAA 4 cut(s) 144, 674, 1277, 1384
SatI GCNGC 2 cut(s) 438, 1340
Sau3AI GATC 5 cut(s) 13, 598, 724, 750, 1218
Sau96I GGNCC 1 cut(s) 990
ScaI AGTACT 2 cut(s) 815, 916
SchI GAGTC 1 cut(s) 1048
SduI GDGCHC 3 cut(s) 382, 696, 1058
SfaNI GCATC 4 cut(s) 573, 919, 1080, 1326
SfuI TTCGAA 1 cut(s) 1272
SinI GGWCC 1 cut(s) 990
SmiMI CAYNNNNRTG 3 cut(s) 38, 1020, 1103
Sse9I AATT 5 cut(s) 485, 731, 1242, 1274, 1368
SsiI CCGC 1 cut(s) 1179
SspI AATATT 1 cut(s) 1008
SspMI CTAG 6 cut(s) 80, 86, 389, 545, 918, 1020
SstI GAGCTC 1 cut(s) 1058
StyI CCWWGG 3 cut(s) 47, 374, 825
TaaI ACNGT 3 cut(s) 384, 591, 1046
TaiI ACGT 1 cut(s) 576
TaqI TCGA 5 cut(s) 297, 417, 443, 749, 1272
TasI AATT 5 cut(s) 485, 731, 1242, 1274, 1368
TatI WGTACW 2 cut(s) 813, 914
TfiI GAWTC 4 cut(s) 548, 644, 743, 1364
Tru1I TTAA 4 cut(s) 144, 674, 1277, 1384
Tru9I TTAA 4 cut(s) 144, 674, 1277, 1384
TscAI CASTG 3 cut(s) 439, 601, 1049
TseFI GTSAC 3 cut(s) 56, 447, 1040
TseI GCWGC 2 cut(s) 437, 1339
Tsp45I GTSAC 3 cut(s) 56, 447, 1040
TspDTI ATGAA 6 cut(s) 115, 181, 200, 868, 1304, 1320
TspGWI ACGGA 1 cut(s) 692
TspRI CASTG 3 cut(s) 439, 601, 1049
VpaK11BI GGWCC 1 cut(s) 990
XceI RCATGY 1 cut(s) 304
XcmI CCANNNNNNNNNTGG 2 cut(s) 251, 1138
XspI CTAG 6 cut(s) 80, 86, 389, 545, 918, 1020
ZrmI AGTACT 2 cut(s) 815, 916
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.