Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0012407

Physical Location & Seq

Genomic Coordinates Forward (+)

6100166 .. 6104197

Gene Structure 4032 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g06780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1269 bp

ATGGGCAAAGACGACGAAGAAATGAGGGGAGAGATAGAGGAGCGGTTGATAAACGAGGAGTACAAGATATGGAAGAAGAACACTCCATTTTTGTACGATCTGGTCATAACCCATGCCCTAGAATGGCCATCGCTTACTGTGGAGTGGCTTCCCGACCGAGAGGAGCCTCCGGGGAAGGACTATTCGGTGCAGAAGATGATTTTGGGGACCCACACCTCCGAGAACGAGCCGAATTACCTTATGCTCGCTCAGGTTCAGCTGCCGTTGGAGGACGCCGAGAACGATGCGCGGCATTATGATGATGATCGAGCTGAGGTTGGGGGTTTCGGTTGCGCCAACGGAAAGGTGCAAATAATCCAGCAAATAAATCATGATGGAGAGGTTAATCGGGCTCGTTATATGCCTCAGAATCCATTTATTATTGCCACAAAGACTGTCAATGCTGAAGTTTTTGTGTTTGATTATAGCAAACATCCATCTAAGCCTCCCGTAGATGGTGCATGCAGTCCTGATTTGAGGCTGAGGGGCCACAGCACTGAAGGATATGGTTTGTCGTGGAGTAAGTTCAAGCAGGGTCATTTACTCAGTGGTTCTGATGATGCTCAGATATGCCTATGGGATATTAATGCGACTGCTAAGAACAAAACCCTTGAAGCTATGCAGATATTTAAGGTTCATGAAGGTGTAGTAGAAGATGTAGCATGGCATTTGAGGCATGAAAACTTATTTGGTTCTGTTGGCGATGATCAATACCTTCTTATATGGGATATCCGGACTCCATCGGTTACCAAGCCTGTCCAATCTGTAGTTGCTCATCAAAGTGAGGTTAACTGTTTGGCTTTCAATCCCTTCAATGAATGGGTTGTTGCAACTGGATCTACTGACAAAACTGTTAAGTTGTTCGATCTACGCAAAATCAATACTGCACTCCACACCTTTGATTGTCATAAGGAGGAGGTTTTCCAAGTTGGTTGGAATCCAAAGAATGAAACTATCTTAGCTTCTTGTTGTCTTGGTAGGAGACTCATGGTGTGGGATCTTAGCAGAATCGATGAAGAGCAGACACCCGAGGATGCAGAAGATGGCCCCCCAGAGTTGCTTTTTATTCATGGGGGTCACACCAGCAAAATATCTGATTTTTCGTGGAACCCCTGTGAAGATTGGGTTATTTCTAGCGTCGCTGAAGATAACATACTCCAAATATGGCAGATGGCAGAGAACATTTACCATGACGAAGATGATTTACCTGAAGAACCGGCAAAGCCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000151 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005677 GO:0005737 GO:0006139 GO:0006323 GO:0006325 GO:0006333 GO:0006338 GO:0006349 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008283 GO:0009507 GO:0009536 GO:0009555 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009909 GO:0009987 GO:0010026 GO:0010154 GO:0010214 GO:0010468 GO:0016043 GO:0017053 GO:0019219 GO:0019222 GO:0022414 GO:0022607 GO:0030154 GO:0031323 GO:0031461 GO:0031497 GO:0031507 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0040029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045787 GO:0046483 GO:0048229 GO:0048316 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048580 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051276 GO:0051726 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0070828 GO:0071103 GO:0071514 GO:0071704 GO:0071840 GO:0080008 GO:0080090 GO:0090558 GO:0090568 GO:0099402 GO:1901360 GO:1902494 GO:1990234 GO:2000026 GO:2000241 GO:2000653

KEGG Pathways

Metabolic & Signaling

ko04218 map04218

Pfam Domains

Protein Families

CAF1C_H4-bd WD40

Protein Analysis

423

Amino Acids

48.14

Weight (kDa)

4.72

Isoelectric Point (pI)

48.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CAF1C_H4-bd	PF12265	19 - 88	1.7e-31	Histone-binding protein RBBP4 or subunit C of CAF1 complex
Beta-prop_THOC3	PF25174	115 - 220	7.9e-07	THOC3 beta-propeller domain
WD40_CDC20-Fz	PF24807	117 - 265	3e-09	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st	PF25173	123 - 288	1.7e-12	WDR3 first beta-propeller domain
Beta-prop_CAF1B_HIR1	PF24105	124 - 235	7.4e-07	CAF1B/HIR1 beta-propeller domain
Beta-prop_THOC3	PF25174	178 - 267	4.2e-12	THOC3 beta-propeller domain
Beta-prop_WDR36-Utp21_2nd	PF25168	178 - 330	1.7e-08	WDR36/Utp21 second beta-propeller domain
WD40_Gbeta	PF25391	181 - 307	4.5e-10	G protein beta WD-40 repeat protein
Beta-prop_EML_2	PF23414	191 - 361	2e-11	Echinoderm microtubule-associated protein second beta-propeller
WDR55	PF24796	197 - 351	3.3e-11	WDR55
Beta-prop_CAF1B_HIR1	PF24105	215 - 307	4.7e-06	CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR5	PF25175	215 - 349	3.9e-20	WDR5 beta-propeller domain
Beta-prop_EIPR1	PF23609	224 - 301	5e-12	EIPR1 beta-propeller
Beta-prop_WDR36-Utp21_1st	PF25171	247 - 403	6.7e-09	WDR36/Utp21 first beta-propeller
Beta-prop_EML	PF23409	251 - 348	1.6e-06	Echinoderm microtubule-associated protein first beta-propeller
WD40_CDC20-Fz	PF24807	264 - 405	4.2e-12	CDC20/Fizzy WD40 domain
WD40	PF00400	264 - 302	6.7e-09	WD domain, G-beta repeat
WD40_RFWD3	PF23419	264 - 352	2.7e-06	E3 ubiquitin-protein ligase RFWD3 WD40 domain
Beta-prop_WDR3_1st	PF25173	266 - 406	1.1e-12	WDR3 first beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	267 - 404	1.1e-06	TEP-1 second beta-propeller
Beta-prop_Aladin	PF25460	268 - 406	1e-06	Aladin seven-bladed propeller
WD40_WDHD1_1st	PF24817	269 - 352	1e-07	WDHD1 first WD40 domain
WD40_Prp19	PF24814	272 - 405	4.8e-12	Prp19 WD40 domain
Beta-prop_THOC3	PF25174	272 - 352	3.3e-13	THOC3 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0012407)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58230
fragaria_vesca	FvH4_7g08380 FvH4_7g08380
malus_domestica	MD02G1228600.v1.1 MD07G1083900.v1.1
prunus_persica	Prupe.2G110700_v2.0.a1
pyrus_communis	pycom02g19730 pycom07g06780
rosa_chinensis	RchiOBHm_Chr1g0340261
rosa_laevigata	RLG00000029008
rosa_multiflora	Rmu_sc0001836.1_g000007 Rmu_sc0005193.1_g000010
rosa_roxburghii	Rroxscaffold_4G00311130
rosa_rugosa	Rorug01G0164500.1
rosa_samantha	Rh1AG179200 Rh1BG147400 Rh1CG166100 Rh1DG179300
rosa_wichuraiana	Rw1G014930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	43
AccII	CGCG	1 cut(s)	289
AccIII	TCCGGA	1 cut(s)	771
AciI	CCGC	2 cut(s)	43, 289
AclWI	GGATC	2 cut(s)	883, 1044
AcoI	YGGCCR	1 cut(s)	125
AcuI	CTGAAG	4 cut(s)	465, 558, 1203, 1269
AcyI	GRCGYC	1 cut(s)	273
AfaI	GTAC	2 cut(s)	62, 95
AfiI	CCNNNNNNNGG	2 cut(s)	123, 494
AgsI	TTSAA	4 cut(s)	568, 653, 844, 853
AjuI	GAANNNNNNNTTGG	4 cut(s)	185, 217, 711, 743
AluBI	AGCT	4 cut(s)	259, 311, 656, 1001
AluI	AGCT	4 cut(s)	259, 311, 656, 1001
Alw26I	GTCTC	1 cut(s)	1015
AlwI	GGATC	2 cut(s)	883, 1044
Ama87I	CYCGRG	1 cut(s)	1067
Aor13HI	TCCGGA	1 cut(s)	771
AoxI	GGCC	3 cut(s)	125, 526, 1084
ApeKI	GCWGC	1 cut(s)	259
AseI	ATTAAT	1 cut(s)	624
AspLEI	GCGC	2 cut(s)	289, 335
AspS9I	GGNCC	3 cut(s)	207, 526, 1085
AsuC2I	CCSGG	1 cut(s)	171
AvaI	CYCGRG	1 cut(s)	1067
AvaII	GGWCC	1 cut(s)	207
BalI	TGGCCA	1 cut(s)	127
BanII	GRGCYC	1 cut(s)	394
BarI	GAAGNNNNNNTAC	4 cut(s)	1176, 1208, 1227, 1259
BbvCI	CCTCAGC	2 cut(s)	312, 521
BbvI	GCAGC	1 cut(s)	246
BccI	CCATC	7 cut(s)	136, 368, 484, 488, 787, 1076, 1204
BceAI	ACGGC	1 cut(s)	247
BcgI	CGANNNNNNTGC	2 cut(s)	266, 300
BclI	TGATCA	1 cut(s)	745
BcnI	CCSGG	1 cut(s)	171
BcoDI	GTCTC	1 cut(s)	1015
BfaI	CTAG	3 cut(s)	119, 1173, 1267
BfmI	CTRYAG	1 cut(s)	804
BisI	GCNGC	2 cut(s)	260, 290
BlsI	GCNGC	2 cut(s)	261, 291
Bme1390I	CCNGG	1 cut(s)	171
Bme18I	GGWCC	1 cut(s)	207
BmeT110I	CYCGRG	1 cut(s)	1067
BmgT120I	GGNCC	3 cut(s)	207, 526, 1085
BmiI	GGNNCC	6 cut(s)	165, 208, 209, 527, 1087, 1148
BmrFI	CCNGG	1 cut(s)	171
BmsI	GCATC	3 cut(s)	274, 589, 1063
Bpu10I	CCTNAGC	3 cut(s)	249, 312, 521
BpuMI	CCSGG	1 cut(s)	171
Bsa29I	ATCGAT	1 cut(s)	1050
BsaBI	GATNNNNATC	1 cut(s)	303
BsaHI	GRCGYC	1 cut(s)	273
BsaJI	CCNNGG	2 cut(s)	170, 1068
BsaWI	WCCGGW	1 cut(s)	771
Bsc4I	CCNNNNNNNGG	2 cut(s)	123, 494
Bse118I	RCCGGY	1 cut(s)	1255
Bse1I	ACTGG	1 cut(s)	877
Bse8I	GATNNNNATC	1 cut(s)	303
BseAI	TCCGGA	1 cut(s)	771
BseCI	ATCGAT	1 cut(s)	1050
BseDI	CCNNGG	2 cut(s)	170, 1068
BseGI	GGATG	2 cut(s)	472, 1078
BseJI	GATNNNNATC	1 cut(s)	303
BseLI	CCNNNNNNNGG	2 cut(s)	123, 494
BseMII	CTCAG	6 cut(s)	263, 303, 419, 512, 598, 617
BseNI	ACTGG	1 cut(s)	877
BseRI	GAGGAG	4 cut(s)	53, 71, 176, 968
BseXI	GCAGC	1 cut(s)	246
BsgI	GTGCAG	2 cut(s)	209, 909
Bsh1236I	CGCG	1 cut(s)	289
Bsh1285I	CGRYCG	1 cut(s)	157
BshFI	GGCC	3 cut(s)	127, 528, 1086
BshVI	ATCGAT	1 cut(s)	1050
BsiEI	CGRYCG	1 cut(s)	157
BsiHKCI	CYCGRG	1 cut(s)	1067
BsiSI	CCGG	3 cut(s)	170, 772, 1256
BslFI	GGGAC	1 cut(s)	220
BslI	CCNNNNNNNGG	2 cut(s)	123, 494
BsmAI	GTCTC	1 cut(s)	1015
BsmFI	GGGAC	1 cut(s)	220
BsnI	GGCC	3 cut(s)	127, 528, 1086
BsoBI	CYCGRG	1 cut(s)	1067
Bsp1286I	GDGCHC	1 cut(s)	394
Bsp13I	TCCGGA	1 cut(s)	771
Bsp143I	GATC	6 cut(s)	97, 304, 745, 875, 904, 1036
BspACI	CCGC	2 cut(s)	43, 289
BspANI	GGCC	3 cut(s)	127, 528, 1086
BspCNI	CTCAG	6 cut(s)	262, 304, 418, 513, 597, 616
BspDI	ATCGAT	1 cut(s)	1050
BspEI	TCCGGA	1 cut(s)	771
BspFNI	CGCG	1 cut(s)	289
BspHI	TCATGA	2 cut(s)	370, 676
BspLI	GGNNCC	6 cut(s)	165, 208, 209, 527, 1087, 1148
BspPI	GGATC	2 cut(s)	883, 1044
BspQI	GCTCTTC	1 cut(s)	1050
BsrBI	CCGCTC	1 cut(s)	43
BsrFI	RCCGGY	1 cut(s)	1255
BsrI	ACTGG	1 cut(s)	877
BssAI	RCCGGY	1 cut(s)	1255
BssECI	CCNNGG	2 cut(s)	170, 1068
BssMI	GATC	6 cut(s)	97, 304, 745, 875, 904, 1036
BssNI	GRCGYC	1 cut(s)	273
Bst4CI	ACNGT	4 cut(s)	139, 436, 833, 892
Bst6I	CTCTTC	1 cut(s)	1050
BstACI	GRCGYC	1 cut(s)	273
BstC8I	GCNNGC	2 cut(s)	246, 502
BstEII	GGTNACC	1 cut(s)	784
BstF5I	GGATG	2 cut(s)	472, 1078
BstFNI	CGCG	1 cut(s)	289
BstHHI	GCGC	2 cut(s)	289, 335
BstKTI	GATC	6 cut(s)	100, 307, 748, 878, 907, 1039
BstMAI	GTCTC	1 cut(s)	1015
BstMBI	GATC	6 cut(s)	97, 304, 745, 875, 904, 1036
BstMCI	CGRYCG	1 cut(s)	157
BstMWI	GCNNNNNNNGC	1 cut(s)	712
BstNSI	RCATGY	1 cut(s)	504
BstPI	GGTNACC	1 cut(s)	784
BstSCI	CCNGG	1 cut(s)	169
BstSFI	CTRYAG	1 cut(s)	804
BstUI	CGCG	1 cut(s)	289
BstV1I	GCAGC	1 cut(s)	246
BstX2I	RGATCY	2 cut(s)	875, 1036
BstYI	RGATCY	2 cut(s)	875, 1036
Bsu15I	ATCGAT	1 cut(s)	1050
BsuRI	GGCC	3 cut(s)	127, 528, 1086
BsuTUI	ATCGAT	1 cut(s)	1050
BtgZI	GCGATG	2 cut(s)	114, 756
BtsCI	GGATG	2 cut(s)	472, 1078
BtsIMutI	CAGTG	2 cut(s)	534, 592
Cac8I	GCNNGC	2 cut(s)	246, 502
CciI	TCATGA	2 cut(s)	370, 676
CfoI	GCGC	2 cut(s)	289, 335
Cfr10I	RCCGGY	1 cut(s)	1255
Cfr13I	GGNCC	3 cut(s)	207, 526, 1085
ClaI	ATCGAT	1 cut(s)	1050
CseI	GACGC	2 cut(s)	281, 1165
Csp6I	GTAC	2 cut(s)	61, 94
CviAII	CATG	9 cut(s)	113, 371, 501, 677, 702, 716, 1027, 1109, 1229
CviQI	GTAC	2 cut(s)	61, 94
DpnI	GATC	6 cut(s)	99, 306, 747, 877, 906, 1038
DpnII	GATC	6 cut(s)	97, 304, 745, 875, 904, 1036
EaeI	YGGCCR	1 cut(s)	125
Eam1104I	CTCTTC	1 cut(s)	1050
EarI	CTCTTC	1 cut(s)	1050
Eco24I	GRGCYC	1 cut(s)	394
Eco32I	GATATC	1 cut(s)	769
Eco47I	GGWCC	1 cut(s)	207
Eco57I	CTGAAG	4 cut(s)	465, 558, 1203, 1269
Eco88I	CYCGRG	1 cut(s)	1067
Eco91I	GGTNACC	1 cut(s)	784
EcoO109I	RGGNCCY	1 cut(s)	207
EcoO65I	GGTNACC	1 cut(s)	784
EcoRV	GATATC	1 cut(s)	769
EcoT38I	GRGCYC	1 cut(s)	394
FaeI	CATG	9 cut(s)	116, 374, 504, 680, 705, 719, 1030, 1112, 1232
FaqI	GGGAC	1 cut(s)	220
FatI	CATG	9 cut(s)	112, 370, 500, 676, 701, 715, 1026, 1108, 1228
FbaI	TGATCA	1 cut(s)	745
Fnu4HI	GCNGC	2 cut(s)	260, 290
FokI	GGATG	2 cut(s)	459, 1085
FriOI	GRGCYC	1 cut(s)	394
Fsp4HI	GCNGC	2 cut(s)	260, 290
FspBI	CTAG	3 cut(s)	119, 1173, 1267
GlaI	GCGC	2 cut(s)	288, 334
GluI	GCNGC	2 cut(s)	260, 290
HaeIII	GGCC	3 cut(s)	127, 528, 1086
HapII	CCGG	3 cut(s)	170, 772, 1256
HgaI	GACGC	2 cut(s)	281, 1165
HhaI	GCGC	2 cut(s)	289, 335
Hin1I	GRCGYC	1 cut(s)	273
Hin1II	CATG	9 cut(s)	116, 374, 504, 680, 705, 719, 1030, 1112, 1232
Hin6I	GCGC	2 cut(s)	287, 333
HinP1I	GCGC	2 cut(s)	287, 333
HincII	GTYRAC	1 cut(s)	829
HindII	GTYRAC	1 cut(s)	829
HinfI	GANTC	5 cut(s)	409, 775, 976, 1023, 1047
HpaI	GTTAAC	1 cut(s)	829
HpaII	CCGG	3 cut(s)	170, 772, 1256
Hpy166II	GTNNAC	1 cut(s)	829
Hpy188I	TCNGA	5 cut(s)	220, 408, 595, 606, 1135
Hpy188III	TCNNGA	5 cut(s)	152, 371, 509, 677, 772
Hpy8I	GTNNAC	1 cut(s)	829
Hpy99I	CGWCG	2 cut(s)	17, 1181
HpyAV	CCTTC	5 cut(s)	169, 533, 674, 764, 859
HpyCH4III	ACNGT	4 cut(s)	139, 436, 833, 892
HpyCH4V	TGCA	8 cut(s)	190, 349, 500, 504, 661, 869, 926, 1076
HpyF10VI	GCNNNNNNNGC	1 cut(s)	712
Hsp92I	GRCGYC	1 cut(s)	273
Hsp92II	CATG	9 cut(s)	116, 374, 504, 680, 705, 719, 1030, 1112, 1232
HspAI	GCGC	2 cut(s)	287, 333
KflI	GGGWCCC	1 cut(s)	207
Kpn2I	TCCGGA	1 cut(s)	771
Ksp22I	TGATCA	1 cut(s)	745
KspAI	GTTAAC	1 cut(s)	829
Kzo9I	GATC	6 cut(s)	97, 304, 745, 875, 904, 1036
LguI	GCTCTTC	1 cut(s)	1050
LmnI	GCTCC	2 cut(s)	40, 163
Lsp1109I	GCAGC	1 cut(s)	246
LweI	GCATC	3 cut(s)	274, 589, 1063
MaeI	CTAG	3 cut(s)	119, 1173, 1267
MaeIII	GTNAC	2 cut(s)	784, 1115
MalI	GATC	6 cut(s)	99, 306, 747, 877, 906, 1038
MbiI	CCGCTC	1 cut(s)	43
MboI	GATC	6 cut(s)	97, 304, 745, 875, 904, 1036
MflI	RGATCY	2 cut(s)	875, 1036
MhlI	GDGCHC	1 cut(s)	394
MlsI	TGGCCA	1 cut(s)	127
MluCI	AATT	1 cut(s)	232
MluNI	TGGCCA	1 cut(s)	127
MlyI	GAGTC	2 cut(s)	769, 1017
MmeI	TCCRAC	2 cut(s)	246, 953
Mox20I	TGGCCA	1 cut(s)	127
MroI	TCCGGA	1 cut(s)	771
MscI	TGGCCA	1 cut(s)	127
MseI	TTAA	5 cut(s)	384, 624, 669, 828, 894
MslI	CAYNNNNRTG	3 cut(s)	297, 681, 819
Msp20I	TGGCCA	1 cut(s)	127
MspA1I	CMGCKG	1 cut(s)	259
MspI	CCGG	3 cut(s)	170, 772, 1256
MspR9I	CCNGG	1 cut(s)	171
MvnI	CGCG	1 cut(s)	289
MwoI	GCNNNNNNNGC	1 cut(s)	712
NciI	CCSGG	1 cut(s)	171
NdeII	GATC	6 cut(s)	97, 304, 745, 875, 904, 1036
NlaIII	CATG	9 cut(s)	116, 374, 504, 680, 705, 719, 1030, 1112, 1232
NlaIV	GGNNCC	6 cut(s)	165, 208, 209, 527, 1087, 1148
NmeAIII	GCCGAG	1 cut(s)	301
NmuCI	GTSAC	1 cut(s)	1115
NspI	RCATGY	1 cut(s)	504
PaeI	GCATGC	1 cut(s)	504
PagI	TCATGA	2 cut(s)	370, 676
PciSI	GCTCTTC	1 cut(s)	1050
PcsI	WCGNNNNNNNCGW	1 cut(s)	279
PfeI	GAWTC	3 cut(s)	409, 976, 1047
PkrI	GCNGC	2 cut(s)	261, 291
PleI	GAGTC	2 cut(s)	769, 1017
PpsI	GAGTC	2 cut(s)	769, 1017
PpuMI	RGGWCCY	1 cut(s)	207
PshBI	ATTAAT	1 cut(s)	624
Psp5II	RGGWCCY	1 cut(s)	207
PspEI	GGTNACC	1 cut(s)	784
PspN4I	GGNNCC	6 cut(s)	165, 208, 209, 527, 1087, 1148
PspPI	GGNCC	3 cut(s)	207, 526, 1085
PspPPI	RGGWCCY	1 cut(s)	207
PsuI	RGATCY	2 cut(s)	875, 1036
PvuII	CAGCTG	1 cut(s)	259
RsaI	GTAC	2 cut(s)	62, 95
RsaNI	GTAC	2 cut(s)	61, 94
RseI	CAYNNNNRTG	3 cut(s)	297, 681, 819
SapI	GCTCTTC	1 cut(s)	1050
SaqAI	TTAA	5 cut(s)	384, 624, 669, 828, 894
SatI	GCNGC	2 cut(s)	260, 290
Sau3AI	GATC	6 cut(s)	97, 304, 745, 875, 904, 1036
Sau96I	GGNCC	3 cut(s)	207, 526, 1085
SchI	GAGTC	2 cut(s)	769, 1017
ScrFI	CCNGG	1 cut(s)	171
SduI	GDGCHC	1 cut(s)	394
SfaNI	GCATC	3 cut(s)	274, 589, 1063
SfcI	CTRYAG	1 cut(s)	804
SinI	GGWCC	1 cut(s)	207
SmiMI	CAYNNNNRTG	3 cut(s)	297, 681, 819
SphI	GCATGC	1 cut(s)	504
Sse9I	AATT	1 cut(s)	232
SsiI	CCGC	2 cut(s)	43, 289
SspMI	CTAG	3 cut(s)	119, 1173, 1267
StyD4I	CCNGG	1 cut(s)	169
TaaI	ACNGT	4 cut(s)	139, 436, 833, 892
TaqI	TCGA	3 cut(s)	307, 903, 1050
TaqII	GACCGA	1 cut(s)	171
TasI	AATT	1 cut(s)	232
TatI	WGTACW	1 cut(s)	60
TauI	GCSGC	1 cut(s)	292
TfiI	GAWTC	3 cut(s)	409, 976, 1047
Tru1I	TTAA	5 cut(s)	384, 624, 669, 828, 894
Tru9I	TTAA	5 cut(s)	384, 624, 669, 828, 894
TscAI	CASTG	2 cut(s)	541, 592
TseFI	GTSAC	1 cut(s)	1115
TseI	GCWGC	1 cut(s)	259
Tsp45I	GTSAC	1 cut(s)	1115
TspDTI	ATGAA	7 cut(s)	665, 693, 732, 870, 1002, 1068, 1097
TspGWI	ACGGA	1 cut(s)	354
TspRI	CASTG	2 cut(s)	541, 592
VpaK11BI	GGWCC	1 cut(s)	207
VspI	ATTAAT	1 cut(s)	624
XceI	RCATGY	1 cut(s)	504
XspI	CTAG	3 cut(s)	119, 1173, 1267

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.