Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0012407

Physical Location & Seq

Genomic Coordinates Forward (+)

36393812 .. 36399442

Gene Structure 5631 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG179300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1272 bp

ATGGGCAAAGACGACGAGGAGATGCGGGGCGAGATTGAGGAGAGGCTAGTCAACGAGGAGTACAAGATATGGAAGAAGAACACTCCCTTTCTCTACGATCTGGTCATAACTCACGCCCTGGAGTGGCCGTCGCTCACCGTCGAGTGGCTGCCTGACCGGGAAGAGCCGCCGGGGAAGGACTACTCGGTGCAGAAGATGATATTGGGGACGCACACCTCGGAAAATGAGCCCAATTATCTTATGCTCGCGCAGGTCCAGCTGCCGTTGGAGGACGCGGAGAACGATGCTCGTAATTATGATGATGATCGTGCGGAGGCTGGAGGTTTCGGCTGCGCTAATGGCAAGGTGCAAATAATCCAGCAAATAAACCATGATGGAGAGGTTAATCGGGCTCGTTATATGCCTCAGAATCCATTTATTATTGCCACGAAAACTGTCAGTGCTGAAGTTTTTGTGTTTGATTATAGCAAACACCCATCTAAGCCTCCTTTAGATGGTGCATGCAGTCCTGATTTGAGGCTCAGGGGTCATAGCACTGAAGGATATGGTTTATCATGGAGTAAGTTCAAGCAGGGTCATTTACTCAGTGGTTCTGATGATGCGCAAATATGTTTGTGGGATATCAATGCAAATTCTAAGAACAAAACCCTGGAGGCTACTCAGATATTTAAGGTCCACGAAGGTGTTGTAGAAGATGTAGCATGGCATTTGAGGCATGAATATTTATTCGGTTCTGTTGGTGATGATCAATACCTTCTGGTATGGGATCTCCGGACCCCATCAGTTACCAAGCCTGTCCAATCTGTAGTTGCTCATCAAAGTGAGGTTAACTGTTTGGCCTTCAATCCCTTTAATGAATGGGTGGTTGCAACTGGGTCCACTGACAAAACTGTCAAGCTGTTTGATCTACGCAAAATCAGTACCGCTCTCCACACCTTTGATTGTCATAAGGAGGAGGTTTTCCAAGTCGGTTGGAATCCGAAGAATGAGACTATCTTAGCTTCTTGTTGTCTTGGCAGGAGACTGATGGTGTGGGATCTTAGCAGAATTGATGAGGAGCAAACACCAGAAGATGCAGAAGATGGACCTCCAGAGTTGCTTTTTATTCATGGTGGTCACACCAGTAAAATATCTGATTTTTCTTGGAATCCATGTGAAGATTGGGTTATATCTAGTGTTGCTGAAGATAACATACTACAGATCTGGCAGATGGCGGAGAATATATACCATGATGAAGATGATTTACCTGAAGAACCGGCAAAGCAGCCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000151 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005677 GO:0005737 GO:0006139 GO:0006323 GO:0006325 GO:0006333 GO:0006338 GO:0006349 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008283 GO:0009507 GO:0009536 GO:0009555 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009909 GO:0009987 GO:0010026 GO:0010154 GO:0010214 GO:0010468 GO:0016043 GO:0017053 GO:0019219 GO:0019222 GO:0022414 GO:0022607 GO:0030154 GO:0031323 GO:0031461 GO:0031497 GO:0031507 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0040029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045787 GO:0046483 GO:0048229 GO:0048316 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048580 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051276 GO:0051726 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0070828 GO:0071103 GO:0071514 GO:0071704 GO:0071840 GO:0080008 GO:0080090 GO:0090558 GO:0090568 GO:0099402 GO:1901360 GO:1902494 GO:1990234 GO:2000026 GO:2000241 GO:2000653

KEGG Pathways

Metabolic & Signaling

ko04218 map04218

Pfam Domains

Protein Families

CAF1C_H4-bd WD40

Protein Analysis

423

Amino Acids

48.2

Weight (kDa)

4.69

Isoelectric Point (pI)

48.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CAF1C_H4-bd	PF12265	19 - 88	1.7e-31	Histone-binding protein RBBP4 or subunit C of CAF1 complex
Beta-prop_THOC3	PF25174	115 - 219	3.5e-06	THOC3 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	123 - 288	1.6e-12	WDR3 first beta-propeller domain
Beta-prop_CAF1B_HIR1	PF24105	173 - 245	8.1e-08	CAF1B/HIR1 beta-propeller domain
WD40_CDC20-Fz	PF24807	175 - 402	1.8e-21	CDC20/Fizzy WD40 domain
WD40_Prp19	PF24814	175 - 347	2e-15	Prp19 WD40 domain
Beta-prop_THOC3	PF25174	178 - 267	1.5e-11	THOC3 beta-propeller domain
Beta-prop_WDR36-Utp21_2nd	PF25168	178 - 331	7e-08	WDR36/Utp21 second beta-propeller domain
WD40_Gbeta	PF25391	181 - 306	2.6e-09	G protein beta WD-40 repeat protein
Beta-prop_EML_2	PF23414	191 - 361	4.5e-12	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR3_2nd	PF25172	194 - 302	4.5e-06	WDR3 second beta-propeller domain
WDR55	PF24796	214 - 350	2.4e-10	WDR55
Beta-prop_WDR5	PF25175	216 - 350	7.9e-20	WDR5 beta-propeller domain
Beta-prop_EIPR1	PF23609	227 - 301	1.2e-10	EIPR1 beta-propeller
Beta-prop_WDR36-Utp21_1st	PF25171	248 - 403	8.6e-08	WDR36/Utp21 first beta-propeller
Beta-prop_EML	PF23409	252 - 348	4.3e-06	Echinoderm microtubule-associated protein first beta-propeller
WD40	PF00400	264 - 302	6.7e-09	WD domain, G-beta repeat
Beta-prop_WDR3_1st	PF25173	266 - 406	1.2e-12	WDR3 first beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	266 - 404	2.4e-06	TEP-1 second beta-propeller
Beta-prop_Aladin	PF25460	268 - 406	7.7e-07	Aladin seven-bladed propeller
WD40_Prp19	PF24814	272 - 405	5.8e-12	Prp19 WD40 domain
WD40_WDHD1_1st	PF24817	272 - 352	9.2e-08	WDHD1 first WD40 domain
Beta-prop_THOC3	PF25174	272 - 352	4.3e-13	THOC3 beta-propeller domain
Beta-prop_THOC3	PF25174	316 - 406	3e-07	THOC3 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0012407)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58230
fragaria_vesca	FvH4_7g08380 FvH4_7g08380
malus_domestica	MD02G1228600.v1.1 MD07G1083900.v1.1
prunus_persica	Prupe.2G110700_v2.0.a1
pyrus_communis	pycom02g19730 pycom07g06780
rosa_chinensis	RchiOBHm_Chr1g0340261
rosa_laevigata	RLG00000029008
rosa_multiflora	Rmu_sc0001836.1_g000007 Rmu_sc0005193.1_g000010
rosa_roxburghii	Rroxscaffold_4G00311130
rosa_rugosa	Rorug01G0164500.1
rosa_samantha	Rh1AG179200 Rh1BG147400 Rh1CG166100 Rh1DG179300
rosa_wichuraiana	Rw1G014930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	890
Acc16I	TGCGCA	1 cut(s)	603
Acc36I	ACCTGC	1 cut(s)	241
AccBSI	CCGCTC	1 cut(s)	926
AccII	CGCG	2 cut(s)	248, 275
AccIII	TCCGGA	1 cut(s)	771
AciI	CCGC	6 cut(s)	25, 167, 275, 311, 924, 1214
AclWI	GGATC	2 cut(s)	774, 1044
AcoI	YGGCCR	1 cut(s)	125
AcsI	RAATTY	1 cut(s)	631
AcuI	CTGAAG	4 cut(s)	465, 558, 1203, 1269
AfaI	GTAC	2 cut(s)	62, 922
AfiI	CCNNNNNNNGG	3 cut(s)	123, 144, 494
AgsI	TTSAA	2 cut(s)	568, 844
AjnI	CCWGG	2 cut(s)	117, 648
AjuI	GAANNNNNNNTTGG	2 cut(s)	185, 217
AleI	CACNNNNGTG	1 cut(s)	681
AluBI	AGCT	3 cut(s)	259, 898, 1001
AluI	AGCT	3 cut(s)	259, 898, 1001
Alw26I	GTCTC	2 cut(s)	983, 1015
AlwI	GGATC	2 cut(s)	774, 1044
Aor13HI	TCCGGA	1 cut(s)	771
AoxI	GGCC	2 cut(s)	125, 837
ApeKI	GCWGC	4 cut(s)	148, 259, 330, 1264
ApoI	RAATTY	1 cut(s)	631
AspLEI	GCGC	3 cut(s)	250, 335, 604
AspS9I	GGNCC	5 cut(s)	253, 673, 774, 876, 1085
AsuC2I	CCSGG	2 cut(s)	158, 171
AsuHPI	GGTGA	2 cut(s)	127, 752
AvaII	GGWCC	5 cut(s)	253, 673, 774, 876, 1085
BanII	GRGCYC	2 cut(s)	231, 394
BarI	GAAGNNNNNNTAC	4 cut(s)	1176, 1208, 1227, 1259
BbvI	GCAGC	3 cut(s)	135, 246, 317
BccI	CCATC	7 cut(s)	368, 484, 488, 787, 1021, 1076, 1204
BceAI	ACGGC	2 cut(s)	112, 247
BciT130I	CCWGG	2 cut(s)	119, 650
BclI	TGATCA	1 cut(s)	745
BcnI	CCSGG	2 cut(s)	158, 171
BcoDI	GTCTC	2 cut(s)	983, 1015
BfaI	CTAG	2 cut(s)	47, 1173
BfmI	CTRYAG	2 cut(s)	804, 1196
BfuAI	ACCTGC	1 cut(s)	241
BglII	AGATCT	1 cut(s)	1200
BisI	GCNGC	5 cut(s)	149, 167, 260, 331, 1265
BlsI	GCNGC	5 cut(s)	150, 168, 261, 332, 1266
Bme1390I	CCNGG	4 cut(s)	119, 158, 171, 650
Bme18I	GGWCC	5 cut(s)	253, 673, 774, 876, 1085
BmgT120I	GGNCC	5 cut(s)	253, 673, 774, 876, 1085
BmiI	GGNNCC	2 cut(s)	776, 877
BmrFI	CCNGG	4 cut(s)	119, 158, 171, 650
BmrI	ACTGGG	1 cut(s)	882
BmsI	GCATC	4 cut(s)	12, 274, 589, 1063
BmuI	ACTGGG	1 cut(s)	882
BpmI	CTGGAG	4 cut(s)	140, 339, 671, 1074
Bpu10I	CCTNAGC	1 cut(s)	521
BpuMI	CCSGG	2 cut(s)	158, 171
BsaBI	GATNNNNATC	1 cut(s)	303
BsaJI	CCNNGG	4 cut(s)	117, 170, 216, 648
BsaWI	WCCGGW	1 cut(s)	771
BsaXI	ACNNNNNCTCC	2 cut(s)	113, 143
Bsc4I	CCNNNNNNNGG	3 cut(s)	123, 144, 494
Bse118I	RCCGGY	1 cut(s)	1255
Bse1I	ACTGG	2 cut(s)	877, 1122
Bse8I	GATNNNNATC	1 cut(s)	303
BseAI	TCCGGA	1 cut(s)	771
BseBI	CCWGG	2 cut(s)	119, 650
BseDI	CCNNGG	4 cut(s)	117, 170, 216, 648
BseJI	GATNNNNATC	1 cut(s)	303
BseLI	CCNNNNNNNGG	3 cut(s)	123, 144, 494
BseMII	CTCAG	4 cut(s)	419, 535, 598, 674
BseNI	ACTGG	2 cut(s)	877, 1122
BseRI	GAGGAG	5 cut(s)	32, 53, 71, 968, 1070
BseXI	GCAGC	3 cut(s)	135, 246, 317
BsgI	GTGCAG	1 cut(s)	209
Bsh1236I	CGCG	2 cut(s)	248, 275
BshFI	GGCC	2 cut(s)	127, 839
BsiSI	CCGG	4 cut(s)	157, 170, 772, 1256
BslFI	GGGAC	1 cut(s)	220
BslI	CCNNNNNNNGG	3 cut(s)	123, 144, 494
BsmAI	GTCTC	2 cut(s)	983, 1015
BsmFI	GGGAC	1 cut(s)	220
BsnI	GGCC	2 cut(s)	127, 839
Bsp1286I	GDGCHC	2 cut(s)	231, 394
Bsp13I	TCCGGA	1 cut(s)	771
Bsp143I	GATC	7 cut(s)	97, 304, 745, 766, 904, 1036, 1200
BspACI	CCGC	6 cut(s)	25, 167, 275, 311, 924, 1214
BspANI	GGCC	2 cut(s)	127, 839
BspCNI	CTCAG	4 cut(s)	418, 534, 597, 673
BspEI	TCCGGA	1 cut(s)	771
BspFNI	CGCG	2 cut(s)	248, 275
BspLI	GGNNCC	2 cut(s)	776, 877
BspMI	ACCTGC	1 cut(s)	241
BspPI	GGATC	2 cut(s)	774, 1044
BspQI	GCTCTTC	1 cut(s)	156
BsrBI	CCGCTC	1 cut(s)	926
BsrFI	RCCGGY	1 cut(s)	1255
BsrI	ACTGG	2 cut(s)	877, 1122
BssAI	RCCGGY	1 cut(s)	1255
BssECI	CCNNGG	4 cut(s)	117, 170, 216, 648
BssMI	GATC	7 cut(s)	97, 304, 745, 766, 904, 1036, 1200
Bst2UI	CCWGG	2 cut(s)	119, 650
Bst4CI	ACNGT	4 cut(s)	139, 436, 833, 892
Bst6I	CTCTTC	1 cut(s)	156
BstC8I	GCNNGC	2 cut(s)	246, 502
BstDEI	CTNAG	9 cut(s)	405, 480, 521, 584, 636, 660, 997, 1040, 1269
BstFNI	CGCG	2 cut(s)	248, 275
BstHHI	GCGC	3 cut(s)	250, 335, 604
BstKTI	GATC	7 cut(s)	100, 307, 748, 769, 907, 1039, 1203
BstMAI	GTCTC	2 cut(s)	983, 1015
BstMBI	GATC	7 cut(s)	97, 304, 745, 766, 904, 1036, 1200
BstMWI	GCNNNNNNNGC	3 cut(s)	256, 339, 712
BstNI	CCWGG	2 cut(s)	119, 650
BstNSI	RCATGY	1 cut(s)	504
BstSCI	CCNGG	4 cut(s)	117, 156, 169, 648
BstSFI	CTRYAG	2 cut(s)	804, 1196
BstUI	CGCG	2 cut(s)	248, 275
BstV1I	GCAGC	3 cut(s)	135, 246, 317
BstX2I	RGATCY	3 cut(s)	766, 1036, 1200
BstYI	RGATCY	3 cut(s)	766, 1036, 1200
BsuRI	GGCC	2 cut(s)	127, 839
BtsIMutI	CAGTG	4 cut(s)	445, 534, 592, 879
BveI	ACCTGC	1 cut(s)	241
Cac8I	GCNNGC	2 cut(s)	246, 502
CfoI	GCGC	3 cut(s)	250, 335, 604
Cfr10I	RCCGGY	1 cut(s)	1255
Cfr13I	GGNCC	5 cut(s)	253, 673, 774, 876, 1085
CseI	GACGC	2 cut(s)	217, 281
Csp6I	GTAC	2 cut(s)	61, 921
CviAII	CATG	8 cut(s)	371, 501, 555, 702, 716, 1109, 1152, 1229
CviQI	GTAC	2 cut(s)	61, 921
DdeI	CTNAG	9 cut(s)	405, 480, 521, 584, 636, 660, 997, 1040, 1269
DpnI	GATC	7 cut(s)	99, 306, 747, 768, 906, 1038, 1202
DpnII	GATC	7 cut(s)	97, 304, 745, 766, 904, 1036, 1200
DrdI	GACNNNNNNGTC	1 cut(s)	890
DseDI	GACNNNNNNGTC	1 cut(s)	890
EaeI	YGGCCR	1 cut(s)	125
Eam1104I	CTCTTC	1 cut(s)	156
EarI	CTCTTC	1 cut(s)	156
EciI	GGCGGA	1 cut(s)	1229
Eco24I	GRGCYC	2 cut(s)	231, 394
Eco32I	GATATC	1 cut(s)	622
Eco47I	GGWCC	5 cut(s)	253, 673, 774, 876, 1085
Eco57I	CTGAAG	4 cut(s)	465, 558, 1203, 1269
EcoRII	CCWGG	2 cut(s)	117, 648
EcoRV	GATATC	1 cut(s)	622
EcoT38I	GRGCYC	2 cut(s)	231, 394
FaeI	CATG	8 cut(s)	374, 504, 558, 705, 719, 1112, 1155, 1232
FaqI	GGGAC	1 cut(s)	220
FatI	CATG	8 cut(s)	370, 500, 554, 701, 715, 1108, 1151, 1228
FauI	CCCGC	1 cut(s)	18
FbaI	TGATCA	1 cut(s)	745
Fnu4HI	GCNGC	5 cut(s)	149, 167, 260, 331, 1265
FriOI	GRGCYC	2 cut(s)	231, 394
Fsp4HI	GCNGC	5 cut(s)	149, 167, 260, 331, 1265
FspBI	CTAG	2 cut(s)	47, 1173
FspI	TGCGCA	1 cut(s)	603
GlaI	GCGC	3 cut(s)	249, 334, 603
GluI	GCNGC	5 cut(s)	149, 167, 260, 331, 1265
GsuI	CTGGAG	4 cut(s)	140, 339, 671, 1074
HaeIII	GGCC	2 cut(s)	127, 839
HapII	CCGG	4 cut(s)	157, 170, 772, 1256
HgaI	GACGC	2 cut(s)	217, 281
HhaI	GCGC	3 cut(s)	250, 335, 604
Hin1II	CATG	8 cut(s)	374, 504, 558, 705, 719, 1112, 1155, 1232
Hin6I	GCGC	3 cut(s)	248, 333, 602
HinP1I	GCGC	3 cut(s)	248, 333, 602
HincII	GTYRAC	2 cut(s)	52, 829
HindII	GTYRAC	2 cut(s)	52, 829
HinfI	GANTC	3 cut(s)	409, 976, 1147
HpaI	GTTAAC	1 cut(s)	829
HpaII	CCGG	4 cut(s)	157, 170, 772, 1256
HphI	GGTGA	2 cut(s)	127, 752
Hpy166II	GTNNAC	4 cut(s)	52, 676, 829, 879
Hpy188I	TCNGA	6 cut(s)	220, 408, 595, 663, 981, 1135
Hpy188III	TCNNGA	3 cut(s)	509, 772, 1091
Hpy8I	GTNNAC	4 cut(s)	52, 676, 829, 879
Hpy99I	CGWCG	3 cut(s)	17, 133, 143
HpyAV	CCTTC	5 cut(s)	169, 533, 674, 764, 850
HpyCH4III	ACNGT	4 cut(s)	139, 436, 833, 892
HpyCH4V	TGCA	7 cut(s)	190, 349, 500, 504, 629, 869, 1076
HpyF10VI	GCNNNNNNNGC	3 cut(s)	256, 339, 712
HpyF3I	CTNAG	9 cut(s)	405, 480, 521, 584, 636, 660, 997, 1040, 1269
Hsp92II	CATG	8 cut(s)	374, 504, 558, 705, 719, 1112, 1155, 1232
HspAI	GCGC	3 cut(s)	248, 333, 602
Kpn2I	TCCGGA	1 cut(s)	771
Ksp22I	TGATCA	1 cut(s)	745
KspAI	GTTAAC	1 cut(s)	829
Kzo9I	GATC	7 cut(s)	97, 304, 745, 766, 904, 1036, 1200
LguI	GCTCTTC	1 cut(s)	156
LmnI	GCTCC	1 cut(s)	1057
Lsp1109I	GCAGC	3 cut(s)	135, 246, 317
LweI	GCATC	4 cut(s)	12, 274, 589, 1063
MaeI	CTAG	2 cut(s)	47, 1173
MaeIII	GTNAC	2 cut(s)	784, 1115
MalI	GATC	7 cut(s)	99, 306, 747, 768, 906, 1038, 1202
MbiI	CCGCTC	1 cut(s)	926
MboI	GATC	7 cut(s)	97, 304, 745, 766, 904, 1036, 1200
MflI	RGATCY	3 cut(s)	766, 1036, 1200
MhlI	GDGCHC	2 cut(s)	231, 394
MluCI	AATT	4 cut(s)	232, 292, 631, 1047
MmeI	TCCRAC	2 cut(s)	246, 953
MroI	TCCGGA	1 cut(s)	771
MseI	TTAA	4 cut(s)	384, 669, 828, 852
MslI	CAYNNNNRTG	2 cut(s)	681, 819
MspA1I	CMGCKG	1 cut(s)	259
MspI	CCGG	4 cut(s)	157, 170, 772, 1256
MspR9I	CCNGG	4 cut(s)	119, 158, 171, 650
MvaI	CCWGG	2 cut(s)	119, 650
MvnI	CGCG	2 cut(s)	248, 275
MwoI	GCNNNNNNNGC	3 cut(s)	256, 339, 712
NciI	CCSGG	2 cut(s)	158, 171
NdeII	GATC	7 cut(s)	97, 304, 745, 766, 904, 1036, 1200
NlaIII	CATG	8 cut(s)	374, 504, 558, 705, 719, 1112, 1155, 1232
NlaIV	GGNNCC	2 cut(s)	776, 877
NmuCI	GTSAC	1 cut(s)	1115
NsbI	TGCGCA	1 cut(s)	603
NspI	RCATGY	1 cut(s)	504
OliI	CACNNNNGTG	1 cut(s)	681
PaeI	GCATGC	1 cut(s)	504
PciSI	GCTCTTC	1 cut(s)	156
PcsI	WCGNNNNNNNCGW	1 cut(s)	279
PfeI	GAWTC	3 cut(s)	409, 976, 1147
PkrI	GCNGC	5 cut(s)	150, 168, 261, 332, 1266
Psp6I	CCWGG	2 cut(s)	117, 648
PspGI	CCWGG	2 cut(s)	117, 648
PspN4I	GGNNCC	2 cut(s)	776, 877
PspPI	GGNCC	5 cut(s)	253, 673, 774, 876, 1085
PsuI	RGATCY	3 cut(s)	766, 1036, 1200
PvuII	CAGCTG	1 cut(s)	259
RsaI	GTAC	2 cut(s)	62, 922
RsaNI	GTAC	2 cut(s)	61, 921
RseI	CAYNNNNRTG	2 cut(s)	681, 819
SapI	GCTCTTC	1 cut(s)	156
SaqAI	TTAA	4 cut(s)	384, 669, 828, 852
SatI	GCNGC	5 cut(s)	149, 167, 260, 331, 1265
Sau3AI	GATC	7 cut(s)	97, 304, 745, 766, 904, 1036, 1200
Sau96I	GGNCC	5 cut(s)	253, 673, 774, 876, 1085
ScrFI	CCNGG	4 cut(s)	119, 158, 171, 650
SduI	GDGCHC	2 cut(s)	231, 394
SfaNI	GCATC	4 cut(s)	12, 274, 589, 1063
SfcI	CTRYAG	2 cut(s)	804, 1196
SinI	GGWCC	5 cut(s)	253, 673, 774, 876, 1085
SmiMI	CAYNNNNRTG	2 cut(s)	681, 819
SphI	GCATGC	1 cut(s)	504
Sse9I	AATT	4 cut(s)	232, 292, 631, 1047
SsiI	CCGC	6 cut(s)	25, 167, 275, 311, 924, 1214
SspI	AATATT	1 cut(s)	722
SspMI	CTAG	2 cut(s)	47, 1173
StyD4I	CCNGG	4 cut(s)	117, 156, 169, 648
TaaI	ACNGT	4 cut(s)	139, 436, 833, 892
TaqI	TCGA	1 cut(s)	141
TasI	AATT	4 cut(s)	232, 292, 631, 1047
TatI	WGTACW	1 cut(s)	60
TauI	GCSGC	1 cut(s)	169
TfiI	GAWTC	3 cut(s)	409, 976, 1147
Tru1I	TTAA	4 cut(s)	384, 669, 828, 852
Tru9I	TTAA	4 cut(s)	384, 669, 828, 852
TscAI	CASTG	4 cut(s)	445, 541, 592, 886
TseFI	GTSAC	1 cut(s)	1115
TseI	GCWGC	4 cut(s)	148, 259, 330, 1264
Tsp45I	GTSAC	1 cut(s)	1115
TspDTI	ATGAA	4 cut(s)	732, 870, 1097, 1248
TspRI	CASTG	4 cut(s)	445, 541, 592, 886
VpaK11BI	GGWCC	5 cut(s)	253, 673, 774, 876, 1085
XapI	RAATTY	1 cut(s)	631
XceI	RCATGY	1 cut(s)	504
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1158
XspI	CTAG	2 cut(s)	47, 1173

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.